F210128

General Info

Members Datasets Scaffolds Average Seq Length
150 119 300 654

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2731639228|2731907522
Length 703
Sequence THARAPRAGPPAGAPRGVVEWEAQAPTVGVVPKGAVRGIVRKAHVRMAALHVATTGSDSASGAEDQPLRTIQRAADLARAGDTVVVHGGVYREWVRPRRGGLSDRRRITYLAAPGEHVAIKGSEQVTGWEQAGGSVWRVTVPNTLFGDFNPYAEELVGDWVVHPEGESRRKHLGDVYLNGKSFYEVLSADEVADPPVRAEVVDNWTGLPDQVRDPEQTRFVWYAEVADDATTIWANFQGADPNAELVEINVRRSVFYPTEHHIDFITVRGFELAQAACPWTPPTADQPGLIGPNWAKGWVIEDNVIHDAKCSAVSLGKEASTGHNFATTRGDKPGYQYQLESVFSARHIGWDREHVGSHVVRRNEIYDCGQNGIVGHLGCVFSTIEDNHIHHIALKREFYGYEIGGIKLHAAIDVEIVHNRIHDCSLGTWLDWETQGTRISRNVFYRNNRDLFVEVSHGPYVVDHNVLASPVSFESFSQGGAFVNNLFGGTLRWEPVWDRATPYHVPHSTQVAGYAVIYGGDDRFIGNVFLGGDVDHAYAPDGFPFQGPVGHGTAVFDGHPTSFDEYLARVDAQPAGDHQRFPGVKQPVYLRDNVYAAGARASDGESSPLVLDGDASLEVVDEGTEVYLQLQLPQGFDGVRVGVVTSADLERTRFVDADFEERDGSPLVVDADLTGERKDAASSYPAGPLTSLAGGEARLRVW

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
3 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
4 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
5 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
6 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
7 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
8 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
9 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
10 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
11 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
12 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
13 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
14 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
15 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
16 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
17 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
18 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
19 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
20 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
21 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
22 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
23 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
24 3300012507 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610 Metagenome Rhizosphere
25 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
26 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
27 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
28 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
29 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
30 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
31 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
32 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
33 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
34 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
47 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
48 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
49 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
50 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
51 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
52 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
53 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
54 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
55 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
56 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
57 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
58 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
59 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
60 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
61 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
62 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
63 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
64 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
65 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
66 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
67 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
68 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
69 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
70 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
71 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
72 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
73 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
74 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
75 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
76 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
77 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
78 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
79 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
80 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
81 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
82 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
83 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
84 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
85 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
86 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
87 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
88 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
89 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
90 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
91 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
92 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
93 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
94 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
95 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
96 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
97 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
98 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
99 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
100 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
101 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
102 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
103 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
104 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
110 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
111 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
112 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
113 2731639228 Motilibacter peucedani DSM 45328 Isolate Rhizosphere
114 2721755693 Paenibacillus polymyxa YC0573 Isolate Rhizosphere
115 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
116 2751185905 Paenibacillus kribbensis 6hRe76 Isolate Unclassified
117 2855683550 Micromonospora sp. RP3T Isolate Unclassified
118 2889276214 Paenibacillus sp. PvR133 Isolate Rhizosphere
119 2996706504 Paenibacillus sp. OT2-17 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94
Metatranscriptomes 1.33
Isolates 4.67

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.67
Nodule 0
Rhizoplane 4
Rhizosphere 84
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10026288 3300003203 Bacteria 2246
2 Ga0068868_100018235 3300005338 Bacteria 5243
3 Ga0070668_100000163 3300005347 Bacteria 42435
4 Ga0070668_100065577 3300005347 Bacteria 2817
5 Ga0070714_100002066 3300005435 Bacteria 14703
6 Ga0070714_100005754 3300005435 Bacteria 9506
7 Ga0070700_100032202 3300005441 Bacteria 3149
8 Ga0070663_100028676 3300005455 Bacteria 3793
9 Ga0070662_100007104 3300005457 Bacteria 7247
10 Ga0070679_100025338 3300005530 Bacteria 5820
11 Ga0068857_100054038 3300005577 Bacteria 3563
12 Ga0068857_100130821 3300005577 Bacteria 2263
13 Ga0068862_100084358 3300005844 Bacteria 2760
14 Ga0081455_10000619 3300005937 Bacteria 46060
15 Ga0081455_10009055 3300005937 Bacteria 10274
16 Ga0081455_10024903 3300005937 Bacteria 5532
17 Ga0081455_10106413 3300005937 Bacteria 2239
18 Ga0081538_10000584 3300005981 Bacteria 40455
19 Ga0081540_1003583 3300005983 Bacteria 12200
20 Ga0081539_10001768 3300005985 Bacteria 34437
21 Ga0081539_10009453 3300005985 Bacteria 8143
22 Ga0081539_10012030 3300005985 Bacteria 6732
23 Ga0075365_10000393 3300006038 Bacteria 15999
24 Ga0070715_10005213 3300006163 Bacteria 4318
25 Ga0075428_100039369 3300006844 Bacteria 5202
26 Ga0068865_100016756 3300006881 Bacteria 4697
27 Ga0105251_10028533 3300009011 Bacteria 2819
28 Ga0105245_10019439 3300009098 Bacteria 5951
29 Ga0105245_10037995 3300009098 Bacteria 4282
30 Ga0105245_10047628 3300009098 Bacteria 3832
31 Ga0105243_10009026 3300009148 Bacteria 7616
32 Ga0105243_10020321 3300009148 Bacteria 5036
33 Ga0105241_10008363 3300009174 Bacteria 7620
34 Ga0105249_10098341 3300009553 Bacteria 2748
35 Ga0157342_1000084 3300012507 Bacteria 4278
36 Ga0157370_10056456 3300013104 Bacteria 3737
37 Ga0157370_10087089 3300013104 Bacteria 2934
38 Ga0157369_10139451 3300013105 Bacteria 2566
39 Ga0157378_10117067 3300013297 Bacteria 2451
40 Ga0157372_10095785 3300013307 Bacteria 3382
41 Ga0157375_10024502 3300013308 Bacteria 5586
42 Ga0182005_1009439 3300015265 Bacteria 2839
43 Ga0206354_11038387 3300020081 Bacteria 5001
44 Ga0213875_10012262 3300021388 Bacteria 4240
45 Ga0224712_10010548 3300022467 Bacteria 2830
46 Ga0207707_10024964 3300025912 Bacteria 5229
47 Ga0207652_10007113 3300025921 Bacteria 9021
48 Ga0207694_10107545 3300025924 Bacteria 2216
49 Ga0207700_10050199 3300025928 Bacteria 3108
50 Ga0207700_10089542 3300025928 Bacteria 2426
51 Ga0207664_10002201 3300025929 Bacteria 12839
52 Ga0207664_10005675 3300025929 Bacteria 8529
53 Ga0207664_10014757 3300025929 Bacteria 5653
54 Ga0207664_10037570 3300025929 Bacteria 3749
55 Ga0207706_10007843 3300025933 Bacteria 9853
56 Ga0207665_10025200 3300025939 Bacteria 3923
57 Ga0207668_10001357 3300025972 Bacteria 14481
58 Ga0207678_10067404 3300026067 Bacteria 3073
59 Ga0207678_10095631 3300026067 Bacteria 2538
60 Ga0207708_10049374 3300026075 Bacteria 3203
61 Ga0207674_10060268 3300026116 Bacteria 3838
62 Ga0207674_10114402 3300026116 Bacteria 2670
63 Ga0207675_100098534 3300026118 Bacteria 2753
64 Ga0265337_1000212 3300028556 Bacteria 31295
65 Ga0265326_10000799 3300028558 Bacteria 11655
66 Ga0265319_1002744 3300028563 Bacteria 9451
67 Ga0265334_10000275 3300028573 Bacteria 28899
68 Ga0265318_10014686 3300028577 Bacteria 3282
69 Ga0265323_10006215 3300028653 Bacteria 5029
70 Ga0265338_10005029 3300028800 Bacteria 17463
71 Ga0265324_10003536 3300029957 Bacteria 7365
72 Ga0265332_10003724 3300031238 Bacteria 7300
73 Ga0265325_10011273 3300031241 Bacteria 5138
74 Ga0265340_10007333 3300031247 Bacteria 5992
75 Ga0265316_10037035 3300031344 Bacteria 3942
76 Ga0307408_100030430 3300031548 Bacteria 3749
77 Ga0265314_10013777 3300031711 Bacteria 6515
78 Ga0265342_10007319 3300031712 Bacteria 8098
79 Ga0307405_10005961 3300031731 Bacteria 5946
80 Ga0307405_10059606 3300031731 Bacteria 2406
81 Ga0307413_10006896 3300031824 Bacteria 5228
82 Ga0307410_10000634 3300031852 Bacteria 14511
83 Ga0307410_10016601 3300031852 Bacteria 4395
84 Ga0307406_10011081 3300031901 Bacteria 5107
85 Ga0307407_10002090 3300031903 Bacteria 7657
86 Ga0307407_10002508 3300031903 Bacteria 7208
87 Ga0307409_100013629 3300031995 Bacteria 5244
88 Ga0307416_100023785 3300032002 Bacteria 4455
89 Ga0307416_100059914 3300032002 Bacteria 3096
90 Ga0307415_100009518 3300032126 Bacteria 5452
91 Ga0307415_100103334 3300032126 Bacteria 2096
92 Ga0373944_0005316 3300035089 Bacteria 3386
93 Ga0373951_0000229 3300035091 Bacteria 19318
94 Ga0373953_0002561 3300035117 Bacteria 5498
95 Ga0373935_0033927 3300035692 Bacteria 3179
96 Ga0373935_0047619 3300035692 Bacteria 2711
97 Ga0436364_1334290 3300037853 Bacteria 8917
98 Ga0436365_0587272 3300039437 Bacteria 2026
99 Ga0436360_0725349 3300039438 Bacteria 3406
100 Ga0439463_001677 3300042016 Bacteria 5803
101 Ga0466966_0021936 3300044684 Bacteria 4192
102 Ga0466963_0014944 3300044694 Bacteria 4797
103 Ga0466963_0029122 3300044694 Bacteria 3552
104 Ga0453684_0003485 3300044712 Bacteria 35339
105 Ga0453684_0011200 3300044712 Bacteria 15097
106 Ga0453684_0099261 3300044712 Bacteria 3567
107 Ga0466971_0028732 3300044719 Bacteria 2487
108 Ga0466970_0000138 3300044765 Bacteria 33745
109 Ga0466967_0069466 3300045976 Bacteria 3149
110 Ga0495629_0028390 3300046459 Bacteria 3972
111 Ga0495653_0051727 3300046463 Bacteria 3151
112 Ga0495594_0009330 3300046499 Bacteria 5068
113 Ga0495608_0031640 3300046511 Bacteria 3576
114 Ga0495658_0010617 3300046683 Bacteria 4609
115 Ga0495600_0077801 3300046809 Bacteria 2166
116 Ga0495680_0073410 3300047322 Bacteria 2600
117 Ga0495614_0006204 3300048089 Bacteria 5371
118 Ga0496105_0010911 3300048908 Bacteria 7157
119 Ga0496106_0014309 3300048909 Bacteria 5863
120 Ga0496109_0074500 3300048912 Bacteria 3120
121 Ga0496109_0133012 3300048912 Bacteria 2323
122 Ga0496110_0063294 3300048913 Bacteria 3268
123 Ga0496114_0092692 3300048917 Bacteria 2567
124 Ga0496117_0006975 3300048920 Bacteria 11200
125 Ga0496117_0031663 3300048920 Bacteria 4033
126 Ga0496119_0012328 3300048922 Bacteria 6957
127 Ga0496120_0027105 3300048923 Bacteria 3530
128 Ga0496121_0008184 3300048924 Bacteria 12414
129 Ga0496122_0002420 3300048925 Bacteria 26559
130 Ga0496124_0003727 3300048927 Bacteria 18377
131 Ga0496125_0000227 3300048928 Bacteria 115226
132 Ga0496125_0053008 3300048928 Bacteria 3330
133 Ga0496126_0006651 3300048929 Bacteria 12864
134 Ga0496126_0007798 3300048929 Bacteria 11672
135 Ga0501031_0011865 3300049568 Bacteria 5680
136 Ga0501032_0001106 3300049569 Bacteria 21565
137 Ga0501034_0026812 3300049571 Bacteria 5862
138 Ga0501038_0004770 3300049574 Bacteria 12605
139 Ga0501046_0012860 3300049580 Bacteria 7119
140 Ga0501083_0004762 3300049744 Bacteria 9585
141 Ga0501035_0013350 3300049822 Bacteria 7581
142 Ga0495619_0006767 3300053085 Bacteria 7250
143 Ga0501082_0002190 3300060353 Bacteria 17109
144 2731907522 2731639228 Bacteria 4187555
145 2723604029 2721755693 Bacteria 6126117
146 2738694688 2738541272 Bacteria 6848551
147 2753811971 2751185905 Bacteria 6142767
148 2855684747 2855683550 Bacteria 7134265
149 2889279968 2889276214 Bacteria 5979355
150 2996708862 2996706504 Bacteria 5757485
151 JGI25406J46586_10026288
152 Ga0068868_100018235
153 Ga0070668_100000163
154 Ga0070668_100065577
155 Ga0070714_100002066
156 Ga0070714_100005754
157 Ga0070700_100032202
158 Ga0070663_100028676
159 Ga0070662_100007104
160 Ga0070679_100025338
161 Ga0068857_100054038
162 Ga0068857_100130821
163 Ga0068862_100084358
164 Ga0081455_10000619
165 Ga0081455_10009055
166 Ga0081455_10024903
167 Ga0081455_10106413
168 Ga0081538_10000584
169 Ga0081540_1003583
170 Ga0081539_10001768
171 Ga0081539_10009453
172 Ga0081539_10012030
173 Ga0075365_10000393
174 Ga0070715_10005213
175 Ga0075428_100039369
176 Ga0068865_100016756
177 Ga0105251_10028533
178 Ga0105245_10019439
179 Ga0105245_10037995
180 Ga0105245_10047628
181 Ga0105243_10009026
182 Ga0105243_10020321
183 Ga0105241_10008363
184 Ga0105249_10098341
185 Ga0157342_1000084
186 Ga0157370_10056456
187 Ga0157370_10087089
188 Ga0157369_10139451
189 Ga0157378_10117067
190 Ga0157372_10095785
191 Ga0157375_10024502
192 Ga0182005_1009439
193 Ga0206354_11038387
194 Ga0213875_10012262
195 Ga0224712_10010548
196 Ga0207707_10024964
197 Ga0207652_10007113
198 Ga0207694_10107545
199 Ga0207700_10050199
200 Ga0207700_10089542
201 Ga0207664_10002201
202 Ga0207664_10005675
203 Ga0207664_10014757
204 Ga0207664_10037570
205 Ga0207706_10007843
206 Ga0207665_10025200
207 Ga0207668_10001357
208 Ga0207678_10067404
209 Ga0207678_10095631
210 Ga0207708_10049374
211 Ga0207674_10060268
212 Ga0207674_10114402
213 Ga0207675_100098534
214 Ga0265337_1000212
215 Ga0265326_10000799
216 Ga0265319_1002744
217 Ga0265334_10000275
218 Ga0265318_10014686
219 Ga0265323_10006215
220 Ga0265338_10005029
221 Ga0265324_10003536
222 Ga0265332_10003724
223 Ga0265325_10011273
224 Ga0265340_10007333
225 Ga0265316_10037035
226 Ga0307408_100030430
227 Ga0265314_10013777
228 Ga0265342_10007319
229 Ga0307405_10005961
230 Ga0307405_10059606
231 Ga0307413_10006896
232 Ga0307410_10000634
233 Ga0307410_10016601
234 Ga0307406_10011081
235 Ga0307407_10002090
236 Ga0307407_10002508
237 Ga0307409_100013629
238 Ga0307416_100023785
239 Ga0307416_100059914
240 Ga0307415_100009518
241 Ga0307415_100103334
242 Ga0373944_0005316
243 Ga0373951_0000229
244 Ga0373953_0002561
245 Ga0373935_0033927
246 Ga0373935_0047619
247 Ga0436364_1334290
248 Ga0436365_0587272
249 Ga0436360_0725349
250 Ga0439463_001677
251 Ga0466966_0021936
252 Ga0466963_0014944
253 Ga0466963_0029122
254 Ga0453684_0003485
255 Ga0453684_0011200
256 Ga0453684_0099261
257 Ga0466971_0028732
258 Ga0466970_0000138
259 Ga0466967_0069466
260 Ga0495629_0028390
261 Ga0495653_0051727
262 Ga0495594_0009330
263 Ga0495608_0031640
264 Ga0495658_0010617
265 Ga0495600_0077801
266 Ga0495680_0073410
267 Ga0495614_0006204
268 Ga0496105_0010911
269 Ga0496106_0014309
270 Ga0496109_0074500
271 Ga0496109_0133012
272 Ga0496110_0063294
273 Ga0496114_0092692
274 Ga0496117_0006975
275 Ga0496117_0031663
276 Ga0496119_0012328
277 Ga0496120_0027105
278 Ga0496121_0008184
279 Ga0496122_0002420
280 Ga0496124_0003727
281 Ga0496125_0000227
282 Ga0496125_0053008
283 Ga0496126_0006651
284 Ga0496126_0007798
285 Ga0501031_0011865
286 Ga0501032_0001106
287 Ga0501034_0026812
288 Ga0501038_0004770
289 Ga0501046_0012860
290 Ga0501083_0004762
291 Ga0501035_0013350
292 Ga0495619_0006767
293 Ga0501082_0002190
294 2731907522
295 2723604029
296 2738694688
297 2753811971
298 2855684747
299 2889279968
300 2996708862

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21258

Glyco_hydro_120_ins

Glycoside hydrolase 120, insertion domain

126

249

0.96

PF07602

DUF1565

Protein of unknown function (DUF1565)

54

96

0.95

PF13229

Beta_helix

Right handed beta helix region

343

488

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
3vsv-assembly1.cif.gz_B the complex structure of xylc with xylose 0.965 4 657
3vsv-assembly1.cif.gz_B the complex structure of xylc with xylose 0.962 4 657
4yzq-assembly2.cif.gz_B c. bescii family 3 pectate lyase double mutant k108a/q111n in complex with trigalacturonic acid 0.6543 206 420
4yzx-assembly2.cif.gz_B c. bescii family 3 pectate lyase double mutant k108a/d107n in complex with trigalacturonic acid 0.6368 205 420
4z03-assembly1.cif.gz_A c. bescii family 3 pectate lyase double mutant k108a in complex with trigalacturonic acid 0.6303 205 420
ID Description Score Start End Superfamily
3vstD01 Mainly Beta;3 Solenoid;Pectate Lyase C-like;Single-stranded right-handed beta-helix, Pectin lyase-like 0.9633 4 657 2.160.20.10
3vstD01 Mainly Beta;3 Solenoid;Pectate Lyase C-like;Single-stranded right-handed beta-helix, Pectin lyase-like 0.9596 4 657 2.160.20.10
3vstA02 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.959 76 206 2.60.40.1180
3vstA02 Mainly Beta;Sandwich;Immunoglobulin-like;Golgi alpha-mannosidase II 0.9518 76 206 2.60.40.1180
af_Q19722_2_74_3.30.1910.20 Alpha Beta;2-Layer Sandwich;so0334 like fold;asparaginyl-tRNA synthetase, N-terminal domain 0.8684 4 44 3.30.1910.20
ID Description Score Start End GO Terms
AF-A0A831USJ0-F1-model_v4 DUF1565 domain-containing protein 0.9886 2 78 GO:0005576
GO:0016837
AF-C2XKZ5-F1-model_v4 deleted 0.988 4 67
AF-A0A0N8KQ62-F1-model_v4 Pel9A-like right handed beta-helix region domain-containing protein 0.9868 2 76 GO:0005576
GO:0016837
AF-R8CMI6-F1-model_v4 Pel9A-like right handed beta-helix region domain-containing protein 0.9866 4 76 GO:0005576
GO:0016837
AF-A0A286NKN2-F1-model_v4 deleted 0.9863 4 75

Map