F209157

General Info

Members Datasets Scaffolds Average Seq Length
150 27 300 184

Family's Representative Sequence

Representative Sequence 3300031344|Ga0265316_10006521|Ga0265316_100065219
Length 178
Sequence MIESLIIAGSGGQGVMLLGKVLAEVIMRQGRQVSWFPAYGPEVRGGTSHCMVTISDQEIGSPYVTKADTLIILNNPSLERFKSRVKDKGLLVLNSSLAKISGFGRIKVLQFPFTDLAIGLGNIKVANMVALGCYLGAKKIVKTEEVLKVFKAMAPAGKADILEINQRALQEGVKLGNG

Samples

Sample ID Description Type Environment
1 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
2 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
3 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
4 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
5 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
6 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
7 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
8 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
9 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
10 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
11 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
12 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
13 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
14 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
15 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
16 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
17 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
18 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
19 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
20 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
21 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
22 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
23 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
24 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
25 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
26 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
27 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98
Metatranscriptomes 2
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.67
Rhizosphere 93.33
Stem 0
Stem Tuber 0
Unclassified 5.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265316_10006521 3300031344 Bacteria 11131
2 Ga0265337_1043616 3300028556 Unclassified 1282
3 Ga0265323_10000914 3300028653 Bacteria 15572
4 Ga0265322_10030511 3300028654 Bacteria 1540
5 Ga0265338_10002534 3300028800 Bacteria 27082
6 Ga0265338_10006958 3300028800 Bacteria 14219
7 Ga0265338_10798152 3300028800 Bacteria 647
8 Ga0265327_10001213 3300031251 Bacteria 34774
9 Ga0265327_10007464 3300031251 Bacteria 8434
10 Ga0265327_10010863 3300031251 Bacteria 6344
11 Ga0265316_10005637 3300031344 Bacteria 12117
12 Ga0265316_10026422 3300031344 Bacteria 4828
13 Ga0265316_10240643 3300031344 Bacteria 1331
14 Ga0265342_10085856 3300031712 Bacteria 1810
15 Ga0265342_10213143 3300031712 Bacteria 1043
16 Ga0316576_10034306 3300031727 Bacteria 3616
17 Ga0316576_10050134 3300031727 Bacteria 3035
18 Ga0316576_10145264 3300031727 Bacteria 1786
19 Ga0316576_10155212 3300031727 Bacteria 1725
20 Ga0316576_10538182 3300031727 Bacteria 857
21 Ga0316578_10049021 3300031728 Bacteria 2468
22 Ga0316578_10136308 3300031728 Bacteria 1478
23 Ga0316578_10217354 3300031728 Unclassified 1149
24 Ga0316578_10302440 3300031728 Bacteria 956
25 Ga0316577_10039080 3300031733 Bacteria 2655
26 Ga0316577_10055181 3300031733 Bacteria 2217
27 Ga0316583_10133831 3300032133 Bacteria 864
28 Ga0316585_10004255 3300032137 Bacteria 3976
29 Ga0316585_10025305 3300032137 Bacteria 1840
30 Ga0316592_1096520 3300033524 Bacteria 678
31 Ga0316588_1072855 3300033528 Bacteria 845
32 Ga0316588_1126227 3300033528 Bacteria 649
33 Ga0316574_0012001 3300035398 Bacteria 4943
34 Ga0316574_0057360 3300035398 Unclassified 2438
35 Ga0316574_0208530 3300035398 Bacteria 1254
36 Ga0316574_0315847 3300035398 Bacteria 992
37 Ga0316582_0004771 3300036647 Bacteria 6909
38 Ga0316582_0011378 3300036647 Bacteria 4915
39 Ga0316582_0101055 3300036647 Unclassified 1910
40 Ga0316582_0135958 3300036647 Bacteria 1654
41 Ga0316584_0000530 3300036712 Bacteria 20366
42 Ga0316584_0008059 3300036712 Bacteria 7235
43 Ga0316584_0088442 3300036712 Bacteria 2319
44 Ga0316584_0171164 3300036712 Bacteria 1611
45 Ga0316584_0196700 3300036712 Bacteria 1489
46 Ga0316584_0297014 3300036712 Bacteria 1170
47 Ga0400488_53586 3300038741 Bacteria 1684
48 Ga0400483_018673 3300039062 Bacteria 1744
49 Ga0400483_040985 3300039062 Bacteria 8036
50 Ga0400483_151455 3300039062 Bacteria 2601
51 Ga0400483_207934 3300039062 Bacteria 4797
52 Ga0400483_252857 3300039062 Unclassified 1207
53 Ga0400489_19543 3300039093 Bacteria 4920
54 Ga0451795_0293406 3300041456 Bacteria 928
55 Ga0451837_0854348 3300041494 Bacteria 1138
56 Ga0451855_1254493 3300041511 Bacteria 4544
57 Ga0451577_0000027 3300042876 Bacteria 397014
58 Ga0451577_0002094 3300042876 Bacteria 24552
59 Ga0451577_0005982 3300042876 Bacteria 12252
60 Ga0451577_0055120 3300042876 Bacteria 3548
61 Ga0451577_0075136 3300042876 Bacteria 3013
62 Ga0451577_0127179 3300042876 Bacteria 2284
63 Ga0451577_0237584 3300042876 Bacteria 1649
64 Ga0451577_0283020 3300042876 Bacteria 1502
65 Ga0451577_0336329 3300042876 Bacteria 1369
66 Ga0451577_0566181 3300042876 Bacteria 1031
67 Ga0451577_0790377 3300042876 Unclassified 857
68 Ga0453683_0000010 3300044673 Bacteria 470890
69 Ga0453683_0000084 3300044673 Bacteria 142500
70 Ga0453683_0000289 3300044673 Bacteria 65192
71 Ga0453683_0001057 3300044673 Bacteria 25583
72 Ga0453683_0021005 3300044673 Bacteria 4169
73 Ga0453683_0027773 3300044673 Bacteria 3586
74 Ga0453683_0045460 3300044673 Bacteria 2753
75 Ga0453683_0058228 3300044673 Bacteria 2417
76 Ga0453683_0086982 3300044673 Bacteria 1958
77 Ga0453683_0106350 3300044673 Bacteria 1763
78 Ga0453683_0202808 3300044673 Bacteria 1259
79 Ga0453683_0238690 3300044673 Bacteria 1157
80 Ga0453683_0267832 3300044673 Bacteria 1090
81 Ga0453683_0269082 3300044673 Bacteria 1087
82 Ga0453683_0317713 3300044673 Bacteria 998
83 Ga0453683_0391647 3300044673 Bacteria 895
84 Ga0453683_0571699 3300044673 Bacteria 736
85 Ga0453684_0000154 3300044712 Bacteria 305062
86 Ga0453684_0000202 3300044712 Bacteria 261894
87 Ga0453684_0000452 3300044712 Bacteria 165844
88 Ga0453684_0000529 3300044712 Bacteria 145936
89 Ga0453684_0000547 3300044712 Bacteria 142253
90 Ga0453684_0001629 3300044712 Bacteria 61225
91 Ga0453684_0001826 3300044712 Bacteria 55887
92 Ga0453684_0003233 3300044712 Bacteria 37275
93 Ga0453684_0004060 3300044712 Bacteria 31814
94 Ga0453684_0006648 3300044712 Bacteria 21842
95 Ga0453684_0007559 3300044712 Bacteria 19927
96 Ga0453684_0010605 3300044712 Bacteria 15717
97 Ga0453684_0011129 3300044712 Bacteria 15175
98 Ga0453684_0017311 3300044712 Bacteria 11177
99 Ga0453684_0019966 3300044712 Bacteria 10157
100 Ga0453684_0023344 3300044712 Bacteria 9119
101 Ga0453684_0024847 3300044712 Bacteria 8727
102 Ga0453684_0028940 3300044712 Bacteria 7886
103 Ga0453684_0036022 3300044712 Bacteria 6826
104 Ga0453684_0047310 3300044712 Bacteria 5706
105 Ga0453684_0049876 3300044712 Bacteria 5511
106 Ga0453684_0054770 3300044712 Bacteria 5192
107 Ga0453684_0061932 3300044712 Bacteria 4798
108 Ga0453684_0085394 3300044712 Bacteria 3921
109 Ga0453684_0089525 3300044712 Bacteria 3806
110 Ga0453684_0097643 3300044712 Bacteria 3605
111 Ga0453684_0105991 3300044712 Bacteria 3427
112 Ga0453684_0118777 3300044712 Bacteria 3197
113 Ga0453684_0144198 3300044712 Bacteria 2839
114 Ga0453684_0216254 3300044712 Bacteria 2223
115 Ga0453684_0267641 3300044712 Unclassified 1955
116 Ga0453684_0268203 3300044712 Bacteria 1952
117 Ga0453684_0336717 3300044712 Bacteria 1705
118 Ga0453684_0346499 3300044712 Bacteria 1676
119 Ga0453684_0423559 3300044712 Bacteria 1486
120 Ga0453684_0604650 3300044712 Bacteria 1201
121 Ga0453684_0663056 3300044712 Bacteria 1137
122 Ga0453684_0670937 3300044712 Bacteria 1129
123 Ga0453684_0738777 3300044712 Bacteria 1066
124 Ga0453684_0799865 3300044712 Bacteria 1017
125 Ga0453684_0888552 3300044712 Unclassified 955
126 Ga0453684_0912147 3300044712 Bacteria 940
127 Ga0453684_1025163 3300044712 Bacteria 876
128 Ga0451576_0000032 3300045051 Bacteria 397014
129 Ga0451576_0000112 3300045051 Bacteria 209574
130 Ga0451576_0000275 3300045051 Bacteria 126175
131 Ga0451576_0001281 3300045051 Bacteria 43771
132 Ga0451576_0003584 3300045051 Bacteria 21115
133 Ga0451576_0005470 3300045051 Bacteria 15909
134 Ga0451576_0019562 3300045051 Bacteria 7389
135 Ga0451576_0024223 3300045051 Bacteria 6558
136 Ga0451576_0025414 3300045051 Bacteria 6379
137 Ga0451576_0035731 3300045051 Bacteria 5270
138 Ga0451576_0037981 3300045051 Bacteria 5098
139 Ga0451576_0054236 3300045051 Bacteria 4198
140 Ga0451576_0065623 3300045051 Bacteria 3779
141 Ga0451576_0072756 3300045051 Bacteria 3577
142 Ga0451576_0113359 3300045051 Bacteria 2822
143 Ga0451576_0126730 3300045051 Bacteria 2660
144 Ga0451576_0128463 3300045051 Bacteria 2641
145 Ga0451576_0166035 3300045051 Bacteria 2304
146 Ga0451576_0291542 3300045051 Bacteria 1706
147 Ga0451576_0298104 3300045051 Bacteria 1686
148 Ga0451576_0305865 3300045051 Bacteria 1663
149 Ga0451576_1169370 3300045051 Bacteria 804
150 Ga0451576_1576069 3300045051 Bacteria 681
151 Ga0265316_10006521
152 Ga0265337_1043616
153 Ga0265323_10000914
154 Ga0265322_10030511
155 Ga0265338_10002534
156 Ga0265338_10006958
157 Ga0265338_10798152
158 Ga0265327_10001213
159 Ga0265327_10007464
160 Ga0265327_10010863
161 Ga0265316_10005637
162 Ga0265316_10026422
163 Ga0265316_10240643
164 Ga0265342_10085856
165 Ga0265342_10213143
166 Ga0316576_10034306
167 Ga0316576_10050134
168 Ga0316576_10145264
169 Ga0316576_10155212
170 Ga0316576_10538182
171 Ga0316578_10049021
172 Ga0316578_10136308
173 Ga0316578_10217354
174 Ga0316578_10302440
175 Ga0316577_10039080
176 Ga0316577_10055181
177 Ga0316583_10133831
178 Ga0316585_10004255
179 Ga0316585_10025305
180 Ga0316592_1096520
181 Ga0316588_1072855
182 Ga0316588_1126227
183 Ga0316574_0012001
184 Ga0316574_0057360
185 Ga0316574_0208530
186 Ga0316574_0315847
187 Ga0316582_0004771
188 Ga0316582_0011378
189 Ga0316582_0101055
190 Ga0316582_0135958
191 Ga0316584_0000530
192 Ga0316584_0008059
193 Ga0316584_0088442
194 Ga0316584_0171164
195 Ga0316584_0196700
196 Ga0316584_0297014
197 Ga0400488_53586
198 Ga0400483_018673
199 Ga0400483_040985
200 Ga0400483_151455
201 Ga0400483_207934
202 Ga0400483_252857
203 Ga0400489_19543
204 Ga0451795_0293406
205 Ga0451837_0854348
206 Ga0451855_1254493
207 Ga0451577_0000027
208 Ga0451577_0002094
209 Ga0451577_0005982
210 Ga0451577_0055120
211 Ga0451577_0075136
212 Ga0451577_0127179
213 Ga0451577_0237584
214 Ga0451577_0283020
215 Ga0451577_0336329
216 Ga0451577_0566181
217 Ga0451577_0790377
218 Ga0453683_0000010
219 Ga0453683_0000084
220 Ga0453683_0000289
221 Ga0453683_0001057
222 Ga0453683_0021005
223 Ga0453683_0027773
224 Ga0453683_0045460
225 Ga0453683_0058228
226 Ga0453683_0086982
227 Ga0453683_0106350
228 Ga0453683_0202808
229 Ga0453683_0238690
230 Ga0453683_0267832
231 Ga0453683_0269082
232 Ga0453683_0317713
233 Ga0453683_0391647
234 Ga0453683_0571699
235 Ga0453684_0000154
236 Ga0453684_0000202
237 Ga0453684_0000452
238 Ga0453684_0000529
239 Ga0453684_0000547
240 Ga0453684_0001629
241 Ga0453684_0001826
242 Ga0453684_0003233
243 Ga0453684_0004060
244 Ga0453684_0006648
245 Ga0453684_0007559
246 Ga0453684_0010605
247 Ga0453684_0011129
248 Ga0453684_0017311
249 Ga0453684_0019966
250 Ga0453684_0023344
251 Ga0453684_0024847
252 Ga0453684_0028940
253 Ga0453684_0036022
254 Ga0453684_0047310
255 Ga0453684_0049876
256 Ga0453684_0054770
257 Ga0453684_0061932
258 Ga0453684_0085394
259 Ga0453684_0089525
260 Ga0453684_0097643
261 Ga0453684_0105991
262 Ga0453684_0118777
263 Ga0453684_0144198
264 Ga0453684_0216254
265 Ga0453684_0267641
266 Ga0453684_0268203
267 Ga0453684_0336717
268 Ga0453684_0346499
269 Ga0453684_0423559
270 Ga0453684_0604650
271 Ga0453684_0663056
272 Ga0453684_0670937
273 Ga0453684_0738777
274 Ga0453684_0799865
275 Ga0453684_0888552
276 Ga0453684_0912147
277 Ga0453684_1025163
278 Ga0451576_0000032
279 Ga0451576_0000112
280 Ga0451576_0000275
281 Ga0451576_0001281
282 Ga0451576_0003584
283 Ga0451576_0005470
284 Ga0451576_0019562
285 Ga0451576_0024223
286 Ga0451576_0025414
287 Ga0451576_0035731
288 Ga0451576_0037981
289 Ga0451576_0054236
290 Ga0451576_0065623
291 Ga0451576_0072756
292 Ga0451576_0113359
293 Ga0451576_0126730
294 Ga0451576_0128463
295 Ga0451576_0166035
296 Ga0451576_0291542
297 Ga0451576_0298104
298 Ga0451576_0305865
299 Ga0451576_1169370
300 Ga0451576_1576069

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01558

POR

Pyruvate ferredoxin/flavodoxin oxidoreductase

11

174

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3on3-assembly3.cif.gz_B the crystal structure of keto/oxoacid ferredoxin oxidoreductase, gamma subunit from geobacter sulfurreducens pca 0.899 1 176
3on3-assembly2.cif.gz_A the crystal structure of keto/oxoacid ferredoxin oxidoreductase, gamma subunit from geobacter sulfurreducens pca 0.8876 3 175
3on3-assembly3.cif.gz_B the crystal structure of keto/oxoacid ferredoxin oxidoreductase, gamma subunit from geobacter sulfurreducens pca 0.8606 1 176
3on3-assembly2.cif.gz_A the crystal structure of keto/oxoacid ferredoxin oxidoreductase, gamma subunit from geobacter sulfurreducens pca 0.8534 3 175
3g2e-assembly1.cif.gz_D structure of putative oorc subunit of 2-oxoglutarate:acceptor oxidoreductase from campylobacter jejuni 0.8451 1 180
ID Description Score Start End Superfamily
af_Q2FZ05_1_182_3.40.920.10 Alpha Beta;3-Layer(aba) Sandwich;Pyruvate-ferredoxin Oxidoreductase; domain 3;Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.89 2 176 3.40.920.10
3on3A00 Alpha Beta;3-Layer(aba) Sandwich;Pyruvate-ferredoxin Oxidoreductase; domain 3;Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.88 3 170 3.40.920.10
af_Q57717_1_177_3.40.920.10 Alpha Beta;3-Layer(aba) Sandwich;Pyruvate-ferredoxin Oxidoreductase; domain 3;Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.8474 3 175 3.40.920.10
af_Q2FZ05_1_182_3.40.920.10 Alpha Beta;3-Layer(aba) Sandwich;Pyruvate-ferredoxin Oxidoreductase; domain 3;Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.845 2 176 3.40.920.10
3g2eC00 Alpha Beta;3-Layer(aba) Sandwich;Pyruvate-ferredoxin Oxidoreductase; domain 3;Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.8295 1 180 3.40.920.10
ID Description Score Start End GO Terms
AF-A0A831PQ56-F1-model_v4 2-oxoglutarate ferredoxin oxidoreductase subunit gamma 0.9863 55 182 GO:0016903
AF-A0A2J6ICK7-F1-model_v4 2-oxoglutarate ferredoxin oxidoreductase subunit gamma 0.9837 1 178 GO:0016903
AF-A0A180FIA4-F1-model_v4 Pyruvate synthase subunit porC (EC 1.2.7.1) 0.9835 1 180 GO:0019164
AF-A0A1I5L2S5-F1-model_v4 2-oxoglutarate ferredoxin oxidoreductase subunit gamma 0.9824 1 180 GO:0016903
AF-A0A2M7E0B7-F1-model_v4 2-oxoglutarate ferredoxin oxidoreductase subunit gamma 0.9792 71 180 GO:0016903

Map