F208995

General Info

Members Datasets Scaffolds Average Seq Length
150 105 300 138

Family's Representative Sequence

Representative Sequence 3300026067|Ga0207678_10996370|Ga0207678_109963702
Length 162
Sequence MTALCIFIGCANADFSVRVSQTEMVVRHTVLTIATRGKGLYIFTDEVERWLAKQGVANGLLTLFIQHTSCSLVIQENADPDVTLDMRDFFDQLVPESGKGFRHTAEGPDDMTSHIRSALTQTSLTIPVINGQMALGTWQGLYVFEHRRRAHDRRVIVQVMGE

Samples

Sample ID Description Type Environment
1 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
19 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
28 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
29 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
30 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
31 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
32 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
33 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
36 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
44 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
45 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
46 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
47 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
48 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
64 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
66 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
67 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
68 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
69 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
70 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
71 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
72 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
73 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
74 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
75 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
76 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
77 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
78 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
79 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
80 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
81 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
82 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
86 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
87 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
88 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
89 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
90 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
91 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
92 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
93 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
94 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
95 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
96 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
97 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
98 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
99 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
100 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
101 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
102 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
103 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
104 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
105 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.33
Nodule 0
Rhizoplane 2
Rhizosphere 90.67
Stem 0
Stem Tuber 0
Unclassified 26.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207678_10996370 3300026067 Unclassified 742
2 JGI25406J46586_10000807 3300003203 Bacteria 14772
3 JGI25153J46596_10000400 3300003215 Bacteria 29140
4 Ga0070683_101500742 3300005329 Unclassified 648
5 Ga0070680_100012607 3300005336 Bacteria 6572
6 Ga0070689_100175941 3300005340 Bacteria 1736
7 Ga0070687_101004833 3300005343 Unclassified 605
8 Ga0070688_100014840 3300005365 Bacteria 4421
9 Ga0070659_101193180 3300005366 Unclassified 673
10 Ga0070709_10025203 3300005434 Bacteria 3512
11 Ga0070705_100964715 3300005440 Bacteria 690
12 Ga0070700_100270037 3300005441 Bacteria 1228
13 Ga0070708_100030945 3300005445 Bacteria 4630
14 Ga0070663_100974413 3300005455 Unclassified 736
15 Ga0070662_101451565 3300005457 Unclassified 591
16 Ga0070685_10240949 3300005466 Bacteria 1194
17 Ga0070699_100002405 3300005518 Bacteria 16794
18 Ga0070699_101335286 3300005518 Bacteria 658
19 Ga0070686_100012968 3300005544 Bacteria 4758
20 Ga0070695_100214651 3300005545 Bacteria 1383
21 Ga0070665_100306505 3300005548 Bacteria 1591
22 Ga0070704_100321006 3300005549 Bacteria 1298
23 Ga0070704_101560203 3300005549 Unclassified 608
24 Ga0070664_100424527 3300005564 Unclassified 1218
25 Ga0068856_101233510 3300005614 Unclassified 764
26 Ga0070702_100853986 3300005615 Bacteria 709
27 Ga0068859_100578451 3300005617 Bacteria 1217
28 Ga0081455_10014526 3300005937 Bacteria 7710
29 Ga0081539_10000036 3300005985 Bacteria 296724
30 Ga0075430_101075168 3300006846 Bacteria 663
31 Ga0075433_10179973 3300006852 Unclassified 1881
32 Ga0075434_100008276 3300006871 Bacteria 9661
33 Ga0075434_100571024 3300006871 Bacteria 1150
34 Ga0075434_100701406 3300006871 Bacteria 1030
35 Ga0075429_100864195 3300006880 Bacteria 792
36 Ga0068865_100161440 3300006881 Bacteria 1710
37 Ga0075436_100001375 3300006914 Bacteria 16566
38 Ga0075436_100023819 3300006914 Bacteria 4207
39 Ga0075436_100061997 3300006914 Bacteria 2584
40 Ga0075436_100090956 3300006914 Bacteria 2121
41 Ga0097620_100578469 3300006931 Bacteria 1217
42 Ga0075435_100000049 3300007076 Bacteria 60558
43 Ga0075435_100072143 3300007076 Bacteria 2821
44 Ga0075435_100158418 3300007076 Bacteria 1906
45 Ga0075435_100941856 3300007076 Bacteria 754
46 Ga0075435_101391820 3300007076 Bacteria 615
47 Ga0105240_10043278 3300009093 Bacteria 5731
48 Ga0105240_11905821 3300009093 Bacteria 618
49 Ga0111539_10018422 3300009094 Bacteria 8650
50 Ga0111539_10077659 3300009094 Bacteria 3907
51 Ga0111539_12059729 3300009094 Bacteria 662
52 Ga0111539_12797966 3300009094 Unclassified 565
53 Ga0105247_11166801 3300009101 Unclassified 611
54 Ga0114129_10193718 3300009147 Unclassified 2758
55 Ga0114129_10311490 3300009147 Bacteria 2095
56 Ga0114129_10740831 3300009147 Bacteria 1259
57 Ga0114129_11102627 3300009147 Bacteria 994
58 Ga0105241_10160522 3300009174 Bacteria 1847
59 Ga0105242_10073909 3300009176 Bacteria 2835
60 Ga0105242_11380951 3300009176 Bacteria 731
61 Ga0157372_10124907 3300013307 Bacteria 2958
62 Ga0157372_10342535 3300013307 Bacteria 1741
63 Ga0157375_11216489 3300013308 Bacteria 884
64 Ga0157380_10090738 3300014326 Unclassified 2521
65 Ga0157380_10587521 3300014326 Bacteria 1099
66 Ga0213876_10392673 3300021384 Bacteria 738
67 Ga0213875_10000018 3300021388 Bacteria 233445
68 Ga0213875_10000076 3300021388 Bacteria 117309
69 Ga0213875_10300199 3300021388 Bacteria 760
70 Ga0209758_1000008 3300025297 Bacteria 1215263
71 Ga0207680_10119024 3300025903 Bacteria 1724
72 Ga0207685_10214021 3300025905 Unclassified 913
73 Ga0207699_11163401 3300025906 Bacteria 571
74 Ga0207654_10793029 3300025911 Bacteria 684
75 Ga0207662_10858542 3300025918 Unclassified 641
76 Ga0207657_10191656 3300025919 Bacteria 1649
77 Ga0207664_10123019 3300025929 Bacteria 2174
78 Ga0207686_10163464 3300025934 Bacteria 1563
79 Ga0207670_10073366 3300025936 Bacteria 2373
80 Ga0207704_11002086 3300025938 Bacteria 706
81 Ga0207711_11188501 3300025941 Bacteria 704
82 Ga0207661_11124829 3300025944 Unclassified 723
83 Ga0207667_10485276 3300025949 Unclassified 1254
84 Ga0207667_11456031 3300025949 Bacteria 657
85 Ga0207678_10042383 3300026067 Bacteria 3942
86 Ga0207702_10526020 3300026078 Unclassified 1155
87 Ga0207648_10399016 3300026089 Bacteria 1246
88 Ga0207428_10322465 3300027907 Bacteria 1141
89 Ga0268265_11771481 3300028380 Unclassified 624
90 Ga0307416_100131891 3300032002 Bacteria 2251
91 Ga0436364_0239259 3300037853 Bacteria 47780
92 Ga0436364_0871624 3300037853 Bacteria 117373
93 Ga0400484_08919 3300038725 Unclassified 1485
94 Ga0436365_0202308 3300039437 Bacteria 1440
95 Ga0436365_1203890 3300039437 Unclassified 989
96 Ga0439453_0153910 3300041408 Bacteria 547
97 Ga0439433_0224561 3300041999 Unclassified 502
98 Ga0439435_0141919 3300042436 Bacteria 766
99 Ga0439444_0032489 3300042437 Bacteria 987
100 Ga0450916_015040 3300042530 Unclassified 1014
101 Ga0466967_2551645 3300045976 Bacteria 506
102 Ga0495603_0247303 3300046455 Bacteria 1027
103 Ga0495603_0322482 3300046455 Bacteria 887
104 Ga0495629_0671209 3300046459 Bacteria 689
105 Ga0495598_0148757 3300046537 Unclassified 816
106 Ga0495588_0751583 3300046674 Unclassified 510
107 Ga0495658_0654135 3300046683 Bacteria 673
108 Ga0496102_0197881 3300048905 Bacteria 1894
109 Ga0496102_1390507 3300048905 Bacteria 621
110 Ga0496112_1801206 3300048915 Unclassified 524
111 Ga0501038_0426681 3300049574 Unclassified 1022
112 Ga0501039_0101452 3300049575 Bacteria 2246
113 Ga0501039_0814730 3300049575 Bacteria 728
114 Ga0501048_0162058 3300049582 Bacteria 1583
115 Ga0501071_0013082 3300049587 Bacteria 5649
116 Ga0501073_0418358 3300049589 Bacteria 926
117 Ga0501075_0155033 3300049591 Bacteria 1746
118 Ga0501076_0018648 3300049592 Bacteria 5295
119 Ga0501077_0115937 3300049593 Bacteria 1698
120 Ga0501077_0256991 3300049593 Unclassified 1111
121 Ga0501079_0041051 3300049741 Unclassified 3571
122 Ga0501080_0084296 3300049742 Unclassified 2953
123 Ga0501045_0957406 3300049824 Bacteria 628
124 Ga0501045_1005209 3300049824 Unclassified 611
125 nmdc:mga05p37_1221940_c1 3300050507 Unclassified 774
126 nmdc:mga05p37_275076_c1 3300050507 Bacteria 2011
127 nmdc:mga05p37_723582_c1 3300050507 Bacteria 1102
128 nmdc:mga09592_400206_c1 3300050508 Unclassified 1187
129 nmdc:mga09592_455915_c1 3300050508 Bacteria 1103
130 nmdc:mga09592_695539_c1 3300050508 Unclassified 865
131 nmdc:mga0qj67_846768_c1 3300050509 Bacteria 722
132 nmdc:mga08y16_345572_c1 3300050511 Bacteria 1529
133 nmdc:mga08y16_41250_c1 3300050511 Bacteria 4836
134 nmdc:mga0n895_1037478_c1 3300050512 Unclassified 800
135 nmdc:mga0n895_30_c1 3300050512 Bacteria 84416
136 nmdc:mga0n895_38445_c1 3300050512 Bacteria 4637
137 nmdc:mga0n895_55263_c1 3300050512 Bacteria 3907
138 nmdc:mga0rr50_237173_c1 3300050513 Bacteria 1511
139 nmdc:mga0rr50_261866_c1 3300050513 Bacteria 1439
140 nmdc:mga0rr50_2_c1 3300050513 Bacteria 373938
141 nmdc:mga08x19_102224_c1 3300050514 Bacteria 1903
142 nmdc:mga08x19_76_c1 3300050514 Bacteria 92204
143 Ga0501084_0008481 3300054114 Bacteria 8500
144 Ga0501084_1604579 3300054114 Unclassified 544
145 Ga0501084_1834256 3300054114 Bacteria 506
146 Ga0590071_053764 3300059421 Unclassified 978
147 Ga0590074_032988 3300059423 Unclassified 918
148 Ga0590075_013729 3300059424 Unclassified 1976
149 Ga0501082_1039898 3300060353 Bacteria 716
150 Ga0530510_1048975 3300061734 Bacteria 624
151 Ga0207678_10996370
152 JGI25406J46586_10000807
153 JGI25153J46596_10000400
154 Ga0070683_101500742
155 Ga0070680_100012607
156 Ga0070689_100175941
157 Ga0070687_101004833
158 Ga0070688_100014840
159 Ga0070659_101193180
160 Ga0070709_10025203
161 Ga0070705_100964715
162 Ga0070700_100270037
163 Ga0070708_100030945
164 Ga0070663_100974413
165 Ga0070662_101451565
166 Ga0070685_10240949
167 Ga0070699_100002405
168 Ga0070699_101335286
169 Ga0070686_100012968
170 Ga0070695_100214651
171 Ga0070665_100306505
172 Ga0070704_100321006
173 Ga0070704_101560203
174 Ga0070664_100424527
175 Ga0068856_101233510
176 Ga0070702_100853986
177 Ga0068859_100578451
178 Ga0081455_10014526
179 Ga0081539_10000036
180 Ga0075430_101075168
181 Ga0075433_10179973
182 Ga0075434_100008276
183 Ga0075434_100571024
184 Ga0075434_100701406
185 Ga0075429_100864195
186 Ga0068865_100161440
187 Ga0075436_100001375
188 Ga0075436_100023819
189 Ga0075436_100061997
190 Ga0075436_100090956
191 Ga0097620_100578469
192 Ga0075435_100000049
193 Ga0075435_100072143
194 Ga0075435_100158418
195 Ga0075435_100941856
196 Ga0075435_101391820
197 Ga0105240_10043278
198 Ga0105240_11905821
199 Ga0111539_10018422
200 Ga0111539_10077659
201 Ga0111539_12059729
202 Ga0111539_12797966
203 Ga0105247_11166801
204 Ga0114129_10193718
205 Ga0114129_10311490
206 Ga0114129_10740831
207 Ga0114129_11102627
208 Ga0105241_10160522
209 Ga0105242_10073909
210 Ga0105242_11380951
211 Ga0157372_10124907
212 Ga0157372_10342535
213 Ga0157375_11216489
214 Ga0157380_10090738
215 Ga0157380_10587521
216 Ga0213876_10392673
217 Ga0213875_10000018
218 Ga0213875_10000076
219 Ga0213875_10300199
220 Ga0209758_1000008
221 Ga0207680_10119024
222 Ga0207685_10214021
223 Ga0207699_11163401
224 Ga0207654_10793029
225 Ga0207662_10858542
226 Ga0207657_10191656
227 Ga0207664_10123019
228 Ga0207686_10163464
229 Ga0207670_10073366
230 Ga0207704_11002086
231 Ga0207711_11188501
232 Ga0207661_11124829
233 Ga0207667_10485276
234 Ga0207667_11456031
235 Ga0207678_10042383
236 Ga0207702_10526020
237 Ga0207648_10399016
238 Ga0207428_10322465
239 Ga0268265_11771481
240 Ga0307416_100131891
241 Ga0436364_0239259
242 Ga0436364_0871624
243 Ga0400484_08919
244 Ga0436365_0202308
245 Ga0436365_1203890
246 Ga0439453_0153910
247 Ga0439433_0224561
248 Ga0439435_0141919
249 Ga0439444_0032489
250 Ga0450916_015040
251 Ga0466967_2551645
252 Ga0495603_0247303
253 Ga0495603_0322482
254 Ga0495629_0671209
255 Ga0495598_0148757
256 Ga0495588_0751583
257 Ga0495658_0654135
258 Ga0496102_0197881
259 Ga0496102_1390507
260 Ga0496112_1801206
261 Ga0501038_0426681
262 Ga0501039_0101452
263 Ga0501039_0814730
264 Ga0501048_0162058
265 Ga0501071_0013082
266 Ga0501073_0418358
267 Ga0501075_0155033
268 Ga0501076_0018648
269 Ga0501077_0115937
270 Ga0501077_0256991
271 Ga0501079_0041051
272 Ga0501080_0084296
273 Ga0501045_0957406
274 Ga0501045_1005209
275 nmdc:mga05p37_1221940_c1
276 nmdc:mga05p37_275076_c1
277 nmdc:mga05p37_723582_c1
278 nmdc:mga09592_400206_c1
279 nmdc:mga09592_455915_c1
280 nmdc:mga09592_695539_c1
281 nmdc:mga0qj67_846768_c1
282 nmdc:mga08y16_345572_c1
283 nmdc:mga08y16_41250_c1
284 nmdc:mga0n895_1037478_c1
285 nmdc:mga0n895_30_c1
286 nmdc:mga0n895_38445_c1
287 nmdc:mga0n895_55263_c1
288 nmdc:mga0rr50_237173_c1
289 nmdc:mga0rr50_261866_c1
290 nmdc:mga0rr50_2_c1
291 nmdc:mga08x19_102224_c1
292 nmdc:mga08x19_76_c1
293 Ga0501084_0008481
294 Ga0501084_1604579
295 Ga0501084_1834256
296 Ga0590071_053764
297 Ga0590074_032988
298 Ga0590075_013729
299 Ga0501082_1039898
300 Ga0530510_1048975

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01894

UPF0047

Uncharacterised protein family UPF0047

42

159

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
1vph-assembly2.cif.gz_E crystal structure of a ybjq-like protein of unknown function (sso2532) from sulfolobus solfataricus p2 at 1.76 a resolution 0.9381 2 116
2p6h-assembly1.cif.gz_A crystal structure of hypothetical protein ape1520 from aeropyrum pernix k1 0.9161 2 116
1xbf-assembly1.cif.gz_C x-ray structure northeast structural genomics consortium target car10 from c. acetobutylicum 0.9159 2 114
2p6c-assembly1.cif.gz_A crystal structure of hypothetical protein aq_2013 from aquifex aeolicus vf5. 0.9138 2 116
1vmh-assembly1.cif.gz_A crystal structure of an uncharacterized conserved protein yjbq/upf0047 family, ortholog yugu b.subtilis (ca_c0907) from clostridium acetobutylicum at 1.31 a resolution 0.9098 2 114
ID Description Score Start End Superfamily
1vphC00 Mainly Beta;Sandwich;Jelly Rolls;YjbQ-like 0.9342 2 116 2.60.120.460
1xbfB00 Mainly Beta;Sandwich;Jelly Rolls;YjbQ-like 0.9196 2 114 2.60.120.460
2p6hB00 Mainly Beta;Sandwich;Jelly Rolls;YjbQ-like 0.9155 2 116 2.60.120.460
2p6cB00 Mainly Beta;Sandwich;Jelly Rolls;YjbQ-like 0.9117 4 116 2.60.120.460
1vphC00 Mainly Beta;Sandwich;Jelly Rolls;YjbQ-like 0.9038 2 116 2.60.120.460
ID Description Score Start End GO Terms
AF-A0A7Y5WSA1-F1-model_v4 YjbQ family protein 0.974 2 116
AF-A0A800ARL9-F1-model_v4 YjbQ family protein 0.9735 12 115
AF-A0A833E875-F1-model_v4 YjbQ family protein 0.9721 2 116
AF-A0A7C4HFY6-F1-model_v4 YjbQ family protein 0.9715 2 116
AF-A0A3N5M2S6-F1-model_v4 YjbQ family protein 0.971 16 116

Map