F207465

General Info

Members Datasets Scaffolds Average Seq Length
149 126 298 384

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2974302888|2974305187
Length 449
Sequence ESPPPSEGPASSRKDARPGSTALPEARLRRARIGVALLFLTNGALFANLLPRYPAIMDELHLSNAQFGMAVAAFPLGALVAGLGAAALIRRFGSAAVAVLGTVLTGAGVLAAGVAPSWALLAGALFAAGAADAITDVAQNSHGLRVQRLYGRSILNSFHAVWSIGAVLGGLMGAGAILAGLSRGLHLGLSCLVFAAVALAASRLLLPGHDPAAAAQEAQATGTAKTTGRPPLKIWAILAALVLIAVSGSLVEDAGSTWAAVYLSGSLGAAASLAALGYVSLTGAQFVGRLVGDRLVDRFGQRAVARCGGVIVLAGMGCALAWPTVPGTIAGFAAAGLGVATLVPAAMHTADELPGLRHGTGLTLVSWLMRLGFLCSPPVVGLIADATSVRTGLLVVPLAGVLVLFLAQVLPPRRGVLHLPKQPRPGDQASVAGDPSSSASSTSSSSAVP

Samples

Sample ID Description Type Environment
1 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
4 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
5 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
6 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
7 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
8 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
9 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
10 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
11 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
12 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
13 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
14 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
15 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
16 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
17 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
18 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
19 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
20 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
21 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
22 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
23 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
24 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
25 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
26 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
27 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
31 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
32 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
33 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
34 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
35 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
36 3300041441 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_1 MetaG Metagenome Rhizoplane
37 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
38 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
39 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
40 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
41 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
42 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
43 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
44 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
45 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
46 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
47 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
48 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
49 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
50 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
51 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
52 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
53 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
54 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
55 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
56 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
57 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
58 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
59 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
60 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
61 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
62 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
63 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
64 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
65 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
66 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
67 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
68 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
69 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
70 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
71 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
72 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
73 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
74 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
75 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
76 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
77 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
78 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
79 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
83 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
84 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
85 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
86 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
87 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
88 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
89 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
90 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
91 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
92 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
93 2974302888 Pseudarthrobacter sp. SORGH_AS 212 Isolate Unclassified
94 2643221578 Streptomyces sp. Root63 Isolate Unclassified
95 2643221613 Oerskovia sp. Root22 Isolate Unclassified
96 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
97 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
98 2643221715 Mycobacterium sp. Root265 Isolate Unclassified
99 2643221721 Oerskovia sp. Root918 Isolate Unclassified
100 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
101 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
102 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
103 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
104 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
105 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
106 2808606394 Promicromonospora sp. C35 Isolate Unclassified
107 2808606700 Arthrobacter agilis UMCV2 Isolate Rhizosphere
108 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
109 2842134933 Mycolicibacterium obuense SEMIA 442 Isolate Nodule
110 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
111 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
112 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
113 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
114 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
115 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
116 2902810491 Mycolicibacterium sp. P9-22 Isolate Unclassified
117 2902837492 Mycolicibacterium sp. P1-18 Isolate Unclassified
118 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
119 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
120 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
121 2945941187 Arthrobacter pascens W1I14 Isolate Rhizosphere
122 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
123 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
124 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
125 8054107350 Arthrobacter rhizosphaerae CCNWLXL 1-35 Isolate Rhizosphere
126 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 77.18
Metatranscriptomes 0
Isolates 22.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.74
Nodule 0.67
Rhizoplane 11.41
Rhizosphere 47.65
Stem 0
Stem Tuber 0
Unclassified 0.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25154J39366_1002421 3300002738 Bacteria 4860
2 Ga0070683_100141304 3300005329 Bacteria 2281
3 Ga0070674_100121881 3300005356 Bacteria 1931
4 Ga0070709_10023209 3300005434 Bacteria 3640
5 Ga0070711_100002308 3300005439 Bacteria 10826
6 Ga0070711_100025804 3300005439 Bacteria 3847
7 Ga0070678_100094987 3300005456 Bacteria 2296
8 Ga0070662_100151946 3300005457 Bacteria 1803
9 Ga0068853_100150596 3300005539 Bacteria 2094
10 Ga0070696_100042242 3300005546 Bacteria 3153
11 Ga0068864_100062982 3300005618 Bacteria 3214
12 Ga0068863_100004925 3300005841 Bacteria 13163
13 Ga0068860_100092843 3300005843 Bacteria 2876
14 Ga0075365_10072377 3300006038 Bacteria 2322
15 Ga0075363_100003499 3300006048 Bacteria 6687
16 Ga0075363_100013733 3300006048 Bacteria 3938
17 Ga0075364_10002589 3300006051 Bacteria 10141
18 Ga0075364_10013157 3300006051 Bacteria 5077
19 Ga0075364_10023477 3300006051 Bacteria 3904
20 Ga0075364_10026230 3300006051 Bacteria 3715
21 Ga0070716_100005688 3300006173 Bacteria 6052
22 Ga0070712_100014598 3300006175 Bacteria 5042
23 Ga0105243_10105482 3300009148 Bacteria 2348
24 Ga0105237_10002602 3300009545 Bacteria 22241
25 Ga0105238_10122792 3300009551 Bacteria 2576
26 Ga0105239_10003573 3300010375 Bacteria 19012
27 Ga0105246_10179815 3300011119 Unclassified 1627
28 Ga0157369_10165600 3300013105 Bacteria 2332
29 Ga0157375_10373964 3300013308 Bacteria 1591
30 Ga0157380_10107128 3300014326 Bacteria 2340
31 Ga0209646_1000085 3300025246 Bacteria 197351
32 Ga0207671_10020623 3300025914 Bacteria 5013
33 Ga0207678_10045459 3300026067 Bacteria 3797
34 Ga0207641_10007592 3300026088 Bacteria 9019
35 Ga0307515_10034843 3300028794 Bacteria 8219
36 Ga0307406_10001401 3300031901 Bacteria 13402
37 Ga0307406_10160201 3300031901 Bacteria 1616
38 Ga0307414_10265218 3300032004 Bacteria 1435
39 Ga0436363_1042225 3300039450 Bacteria 7086
40 Ga0439461_0006908 3300041410 Bacteria 1991
41 Ga0439466_0002260 3300041411 Bacteria 7553
42 Ga0451787_470833 3300041441 Bacteria 2196
43 Ga0451797_1205877 3300041453 Bacteria 3701
44 Ga0451833_1488107 3300041491 Bacteria 1401
45 Ga0451841_0615769 3300041498 Bacteria 3123
46 Ga0439431_0001637 3300041997 Bacteria 4959
47 Ga0439445_0004220 3300042004 Bacteria 3251
48 Ga0439434_0003618 3300042435 Bacteria 4519
49 Ga0466972_0032471 3300044658 Bacteria 2563
50 Ga0466972_0032755 3300044658 Bacteria 2551
51 Ga0466968_0047638 3300044735 Bacteria 1823
52 Ga0466960_0021911 3300044901 Bacteria 2851
53 Ga0495627_004040 3300046453 Bacteria 6255
54 Ga0495629_0012034 3300046459 Bacteria 6272
55 Ga0495638_0014263 3300046460 Bacteria 5378
56 Ga0495641_0019102 3300046461 Bacteria 3518
57 Ga0495606_0010051 3300046507 Bacteria 7909
58 Ga0495648_0062535 3300046524 Bacteria 2203
59 Ga0495581_0008541 3300047315 Bacteria 5936
60 Ga0495676_0013817 3300047321 Bacteria 7239
61 Ga0495673_0005547 3300047469 Bacteria 7605
62 Ga0495593_0017065 3300047673 Bacteria 4087
63 Ga0495626_0030123 3300048091 Bacteria 2619
64 Ga0496100_0006691 3300048903 Bacteria 6306
65 Ga0496100_0220192 3300048903 Bacteria 1392
66 Ga0496101_0000113 3300048904 Bacteria 81197
67 Ga0496101_0005808 3300048904 Bacteria 7893
68 Ga0496102_0000035 3300048905 Bacteria 213557
69 Ga0496102_0000286 3300048905 Bacteria 64518
70 Ga0496103_0000028 3300048906 Bacteria 213660
71 Ga0496103_0000520 3300048906 Bacteria 31686
72 Ga0496104_0200525 3300048907 Bacteria 1907
73 Ga0496106_0011087 3300048909 Bacteria 6665
74 Ga0496107_0235354 3300048910 Bacteria 1363
75 Ga0496108_0021471 3300048911 Bacteria 5307
76 Ga0496109_0290673 3300048912 Bacteria 1541
77 Ga0496111_0299971 3300048914 Bacteria 1191
78 Ga0496112_0021704 3300048915 Bacteria 6108
79 Ga0496116_0000090 3300048919 Bacteria 212651
80 Ga0496116_0000241 3300048919 Bacteria 100186
81 Ga0496117_0000051 3300048920 Bacteria 285716
82 Ga0496117_0000529 3300048920 Bacteria 62772
83 Ga0496118_0000043 3300048921 Bacteria 285716
84 Ga0496118_0002948 3300048921 Bacteria 22105
85 Ga0496119_0001983 3300048922 Bacteria 23230
86 Ga0496119_0003516 3300048922 Bacteria 16192
87 Ga0496119_0058589 3300048922 Bacteria 2320
88 Ga0496120_0002432 3300048923 Bacteria 18838
89 Ga0496121_0000080 3300048924 Bacteria 230195
90 Ga0496121_0016856 3300048924 Bacteria 7513
91 Ga0496122_0016560 3300048925 Bacteria 6962
92 Ga0496124_0028230 3300048927 Bacteria 5022
93 Ga0496125_0002794 3300048928 Bacteria 22070
94 Ga0496125_0003081 3300048928 Bacteria 20817
95 Ga0496125_0051905 3300048928 Bacteria 3377
96 Ga0496126_0000649 3300048929 Bacteria 64480
97 Ga0496126_0001415 3300048929 Bacteria 37973
98 Ga0496126_0131618 3300048929 Bacteria 2161
99 Ga0501034_0001613 3300049571 Bacteria 29293
100 Ga0501034_0097221 3300049571 Bacteria 2940
101 Ga0501037_0044250 3300049573 Bacteria 3269
102 Ga0501038_0157021 3300049574 Bacteria 1851
103 Ga0501043_0034911 3300049579 Bacteria 3955
104 Ga0501070_0076749 3300049586 Bacteria 2766
105 Ga0501073_0046243 3300049589 Bacteria 3062
106 nmdc:mga00v17_84654_c1 3300050491 Bacteria 1985
107 nmdc:mga06z11_120605_c1 3300050494 Bacteria 1462
108 nmdc:mga0sz30_38191_c1 3300050516 Bacteria 2011
109 Ga0500635_0001751 3300053080 Bacteria 5290
110 Ga0500643_001231 3300053087 Bacteria 15236
111 Ga0500643_013563 3300053087 Bacteria 2873
112 Ga0500652_051635 3300053131 Bacteria 1680
113 Ga0500559_0000192 3300053136 Bacteria 49223
114 Ga0500616_0000753 3300053153 Bacteria 37272
115 Ga0501082_0015623 3300060353 Bacteria 6533
116 2974305187 2974302888 Bacteria 4369871
117 2643897827 2643221578 Bacteria 9213798
118 2644083454 2643221613 Bacteria 4622396
119 2644408973 2643221673 Bacteria 9196637
120 2644485390 2643221687 Bacteria 6500351
121 2644634694 2643221715 Bacteria 6671032
122 2644666261 2643221721 Bacteria 4486924
123 2644678637 2643221724 Bacteria 3593515
124 2730228143 2728369380 Bacteria 3620317
125 2739606323 2739367654 Bacteria 6049412
126 2760306870 2758568522 Bacteria 5953541
127 2760624622 2758568621 Bacteria 5967089
128 2804844751 2802429296 Bacteria 7227771
129 2809029550 2808606394 Bacteria 6248540
130 2810365883 2808606700 Bacteria 3482157
131 2835190854 2835188231 Bacteria 3476928
132 2842140379 2842134933 Bacteria 5847019
133 2844853928 2844852863 Bacteria 3849151
134 2852666276 2852663356 Bacteria 4090475
135 2852678805 2852677369 Bacteria 3768884
136 2857725542 2857723135 Bacteria 4217853
137 2861526205 2861520306 Bacteria 8348283
138 2862293327 2862290372 Bacteria 7471434
139 2902811217 2902810491 Bacteria 6794147
140 2902838094 2902837492 Bacteria 6697721
141 2932434008 2932431166 Bacteria 4215299
142 2935891146 2935890801 Bacteria 4593001
143 2939659825 2939657138 Bacteria 3740283
144 2945944764 2945941187 Bacteria 4682474
145 2946050914 2946045630 Bacteria 8527308
146 8004183006 8004182704 Bacteria 3391155
147 8025418359 8025413630 Bacteria 7014048
148 8054107375 8054107350 Bacteria 5022511
149 8056040237 8056037122 Bacteria 3854319
150 JGI25154J39366_1002421
151 Ga0070683_100141304
152 Ga0070674_100121881
153 Ga0070709_10023209
154 Ga0070711_100002308
155 Ga0070711_100025804
156 Ga0070678_100094987
157 Ga0070662_100151946
158 Ga0068853_100150596
159 Ga0070696_100042242
160 Ga0068864_100062982
161 Ga0068863_100004925
162 Ga0068860_100092843
163 Ga0075365_10072377
164 Ga0075363_100003499
165 Ga0075363_100013733
166 Ga0075364_10002589
167 Ga0075364_10013157
168 Ga0075364_10023477
169 Ga0075364_10026230
170 Ga0070716_100005688
171 Ga0070712_100014598
172 Ga0105243_10105482
173 Ga0105237_10002602
174 Ga0105238_10122792
175 Ga0105239_10003573
176 Ga0105246_10179815
177 Ga0157369_10165600
178 Ga0157375_10373964
179 Ga0157380_10107128
180 Ga0209646_1000085
181 Ga0207671_10020623
182 Ga0207678_10045459
183 Ga0207641_10007592
184 Ga0307515_10034843
185 Ga0307406_10001401
186 Ga0307406_10160201
187 Ga0307414_10265218
188 Ga0436363_1042225
189 Ga0439461_0006908
190 Ga0439466_0002260
191 Ga0451787_470833
192 Ga0451797_1205877
193 Ga0451833_1488107
194 Ga0451841_0615769
195 Ga0439431_0001637
196 Ga0439445_0004220
197 Ga0439434_0003618
198 Ga0466972_0032471
199 Ga0466972_0032755
200 Ga0466968_0047638
201 Ga0466960_0021911
202 Ga0495627_004040
203 Ga0495629_0012034
204 Ga0495638_0014263
205 Ga0495641_0019102
206 Ga0495606_0010051
207 Ga0495648_0062535
208 Ga0495581_0008541
209 Ga0495676_0013817
210 Ga0495673_0005547
211 Ga0495593_0017065
212 Ga0495626_0030123
213 Ga0496100_0006691
214 Ga0496100_0220192
215 Ga0496101_0000113
216 Ga0496101_0005808
217 Ga0496102_0000035
218 Ga0496102_0000286
219 Ga0496103_0000028
220 Ga0496103_0000520
221 Ga0496104_0200525
222 Ga0496106_0011087
223 Ga0496107_0235354
224 Ga0496108_0021471
225 Ga0496109_0290673
226 Ga0496111_0299971
227 Ga0496112_0021704
228 Ga0496116_0000090
229 Ga0496116_0000241
230 Ga0496117_0000051
231 Ga0496117_0000529
232 Ga0496118_0000043
233 Ga0496118_0002948
234 Ga0496119_0001983
235 Ga0496119_0003516
236 Ga0496119_0058589
237 Ga0496120_0002432
238 Ga0496121_0000080
239 Ga0496121_0016856
240 Ga0496122_0016560
241 Ga0496124_0028230
242 Ga0496125_0002794
243 Ga0496125_0003081
244 Ga0496125_0051905
245 Ga0496126_0000649
246 Ga0496126_0001415
247 Ga0496126_0131618
248 Ga0501034_0001613
249 Ga0501034_0097221
250 Ga0501037_0044250
251 Ga0501038_0157021
252 Ga0501043_0034911
253 Ga0501070_0076749
254 Ga0501073_0046243
255 nmdc:mga00v17_84654_c1
256 nmdc:mga06z11_120605_c1
257 nmdc:mga0sz30_38191_c1
258 Ga0500635_0001751
259 Ga0500643_001231
260 Ga0500643_013563
261 Ga0500652_051635
262 Ga0500559_0000192
263 Ga0500616_0000753
264 Ga0501082_0015623
265 2974305187
266 2643897827
267 2644083454
268 2644408973
269 2644485390
270 2644634694
271 2644666261
272 2644678637
273 2730228143
274 2739606323
275 2760306870
276 2760624622
277 2804844751
278 2809029550
279 2810365883
280 2835190854
281 2842140379
282 2844853928
283 2852666276
284 2852678805
285 2857725542
286 2861526205
287 2862293327
288 2902811217
289 2902838094
290 2932434008
291 2935891146
292 2939659825
293 2945944764
294 2946050914
295 8004183006
296 8025418359
297 8054107375
298 8056040237

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

253

442

0.87

PF07690

MFS_1

Major Facilitator Superfamily

35

294

0.73

Structural Annotation

Top 5 Hits

ID Description Score Start End
8g92-assembly1.cif.gz_A structure of inhibitor 16d-bound spns2 0.8195 15 393
8ex6-assembly1.cif.gz_A human s1p transporter spns2 in an inward-facing open conformation (state 1*) 0.8056 15 393
8ex4-assembly1.cif.gz_A human s1p transporter spns2 in an inward-facing open conformation (state 1) 0.7973 15 393
6e9n-assembly2.cif.gz_B e. coli d-galactonate:proton symporter in the inward open form 0.791 17 398
8jtc-assembly1.cif.gz_A human vmat2 complex with reserpine 0.7778 16 392
ID Description Score Start End Superfamily
af_P60778_197_387_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8962 220 392 1.20.1250.20
af_P75810_211_401_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8911 220 402 1.20.1250.20
af_D3Z9X5_173_361_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8859 216 392 1.20.1250.20
af_A4QN56_306_560_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8828 220 392 1.20.1250.20
af_P76197_209_395_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.8771 222 393 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A2Z5QU00-F1-model_v4 deleted 0.9458 212 404
AF-A0A3L7A362-F1-model_v4 MFS transporter 0.9397 2 404 GO:0016020
GO:0022857
AF-A0A1G6H4K0-F1-model_v4 Sugar phosphate permease 0.9378 1 404 GO:0016020
GO:0022857
AF-A0A1G6H4K0-F1-model_v4 Sugar phosphate permease 0.9356 1 404 GO:0016020
GO:0022857
AF-A0A4S3ZWY6-F1-model_v4 MFS transporter 0.9354 18 393 GO:0016020
GO:0022857

Map