F207434

General Info

Members Datasets Scaffolds Average Seq Length
149 113 298 442

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2887443736|2887445447
Length 481
Sequence ASHTGEGHALTRSERLDRLPFTRAHTKLLGGSGIGWALDAMDVGLISFILAALAQEWGLSGGERGWLASIGFVGMALGASLGGLLADRIGRRQVFALTLLVYGLATGASAAAGGLAALMVLRFIVGLGLGAELPVASTLVSEFAPKKIRGRIVVILEAFWALGWIMAALVGYFVVPLENGWRWAFLIGMAPAAYALFVRLRLPESVRFLERTGRYAEAEAAVRRYEASAGIPAPLPERVYREDPDGAASPRADAPPGEGSGTERGGPAGNRAESPRGRPGAPRARWSGLWQARLRRRTAGLWIVWFGVNFAYYGAFIWLPSLLVEQGFDLVRSFGYTLIITLAQLPGYAAAAYLIEKWGRRTTLITFLAGSAVSALLFGQAESVATILAAGMALSAFNLGAWGALYAITPELYPTALRGTGAGSAAAFGRIASILAPLAVGYLHVAGGLGVTFAVIGAAFVVACAGAVLLPDRTGMALEDE

Samples

Sample ID Description Type Environment
1 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
2 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
3 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
4 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
5 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
6 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
7 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
8 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
9 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
10 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
11 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
12 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
13 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
14 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
15 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
16 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
19 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
20 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
21 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
22 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
23 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
24 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
25 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
26 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
27 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
28 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
29 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
30 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
31 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
32 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
33 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
34 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
35 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
36 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
37 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
38 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
39 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
40 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
41 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
42 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
43 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
44 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
45 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
46 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
47 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
48 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
49 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
50 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
51 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
52 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
53 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
54 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
55 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
56 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
57 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
58 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
59 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
60 2643221542 Microbacterium sp. Root1433D1 Isolate Unclassified
61 2643221546 Microbacterium sp. Root53 Isolate Unclassified
62 2643221553 Microbacterium sp. Root553 Isolate Unclassified
63 2643221566 Microbacterium sp. Root166 Isolate Unclassified
64 2643221597 Microbacterium sp. Root180 Isolate Unclassified
65 2643221630 Microbacterium sp. Root322 Isolate Unclassified
66 2643221724 Microbacterium sp. Root280D1 Isolate Unclassified
67 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
68 2728369380 Microbacterium sp. 1.5R Isolate Rhizosphere
69 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
70 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
71 2773857759 Microbacterium sp. 1294 Isolate Unclassified
72 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
73 2784132109 Dermacoccus sp. DS28 SAI-028 Isolate Unclassified
74 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
75 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
76 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
77 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
78 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
79 2848551377 Brachybacterium saurashtrense DSM 23186 Isolate Unclassified
80 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
81 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
82 2852663356 Microbacterium sp. JAI119 Isolate Rhizosphere
83 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
84 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
85 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
86 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
87 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
88 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
89 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
90 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
91 2893684298 Kocuria palustris DSM 11925 Isolate Rhizosphere
92 2897561785 Pseudoclavibacter endophyticus EGI 60007 Isolate Unclassified
93 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
94 2920879853 Kocuria salina CV6 Isolate Unclassified
95 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
96 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
97 2932398195 Dietzia sp. 2505 Isolate Rhizosphere
98 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
99 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
100 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
101 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
102 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
103 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
104 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
105 2966924647 Frigoribacterium sp. 2355 Isolate Rhizosphere
106 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
107 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
108 2995726249 Leucobacter zeae CC-MF41 Isolate Rhizosphere
109 3001889506 Janibacter sp. YIM B02568 Isolate Unclassified
110 8004182704 Microbacterium paraoxydans ku-mp Isolate Unclassified
111 8004212874 Microbacterium sp. NC79 Isolate Rhizosphere
112 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
113 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 61.07
Metatranscriptomes 1.34
Isolates 37.58

Biome Distribution

Category Percentage (%)
Aerial Root 0.67
Bulb 0
Endosphere 10.07
Nodule 0
Rhizoplane 4.7
Rhizosphere 44.97
Stem 0
Stem Tuber 0
Unclassified 0.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006562J51391_1019551 3300003578 Bacteria 12440
2 Ga0006562J51391_1019554 3300003578 Bacteria 12490
3 Ga0070697_100000075 3300005536 Bacteria 79532
4 Ga0070697_100122720 3300005536 Bacteria 2174
5 Ga0070686_100000109 3300005544 Bacteria 57720
6 Ga0070696_100041311 3300005546 Bacteria 3186
7 Ga0075365_10000907 3300006038 Bacteria 12435
8 Ga0075363_100031411 3300006048 Bacteria 2754
9 Ga0075364_10019532 3300006051 Bacteria 4254
10 Ga0075364_10033055 3300006051 Bacteria 3327
11 Ga0075364_10040605 3300006051 Bacteria 3018
12 Ga0075367_10009827 3300006178 Bacteria 5012
13 Ga0075369_10005587 3300006186 Bacteria 4708
14 Ga0075369_10030880 3300006186 Bacteria 2258
15 Ga0075431_100010378 3300006847 Bacteria 9358
16 Ga0105244_10002505 3300009036 Bacteria 13810
17 Ga0105245_10084582 3300009098 Bacteria 2907
18 Ga0105243_10000454 3300009148 Bacteria 42589
19 Ga0105243_10156161 3300009148 Bacteria 1962
20 Ga0213874_10002454 3300021377 Bacteria 3997
21 Ga0209646_1000099 3300025246 Bacteria 180436
22 Ga0207655_1002397 3300025728 Bacteria 15287
23 Ga0207709_10001865 3300025935 Bacteria 14019
24 Ga0307413_10059360 3300031824 Bacteria 2350
25 Ga0307410_10031314 3300031852 Bacteria 3412
26 Ga0307410_10091781 3300031852 Bacteria 2157
27 Ga0307406_10000568 3300031901 Bacteria 21270
28 Ga0307406_10004896 3300031901 Bacteria 7294
29 Ga0307406_10011678 3300031901 Bacteria 4986
30 Ga0307406_10020327 3300031901 Bacteria 3909
31 Ga0307409_100029941 3300031995 Bacteria 3904
32 Ga0307409_100179607 3300031995 Bacteria 1872
33 Ga0307409_100208982 3300031995 Bacteria 1752
34 Ga0307409_100254219 3300031995 Bacteria 1608
35 Ga0307416_100105048 3300032002 Bacteria 2471
36 Ga0307416_100221766 3300032002 Bacteria 1814
37 Ga0307414_10007486 3300032004 Bacteria 6134
38 Ga0307414_10048314 3300032004 Bacteria 2935
39 Ga0307414_10145726 3300032004 Bacteria 1860
40 Ga0307415_100018881 3300032126 Bacteria 4175
41 Ga0436364_0804350 3300037853 Bacteria 10572
42 Ga0436360_1185937 3300039438 Bacteria 2288
43 Ga0436363_0692759 3300039450 Bacteria 3965
44 Ga0436363_1288718 3300039450 Unclassified 1489
45 Ga0451789_1161712 3300041443 Bacteria 1769
46 Ga0451791_1131131 3300041451 Bacteria 1742
47 Ga0451793_0209052 3300041452 Bacteria 7081
48 Ga0451793_0503376 3300041452 Bacteria 1552
49 Ga0451793_0656105 3300041452 Bacteria 2747
50 Ga0451843_0643499 3300041509 Bacteria 1619
51 Ga0451853_0531891 3300041512 Bacteria 3667
52 Ga0466972_0022584 3300044658 Bacteria 3131
53 Ga0466965_0007379 3300044683 Bacteria 5047
54 Ga0466965_0014247 3300044683 Bacteria 3762
55 Ga0466965_0033262 3300044683 Bacteria 2519
56 Ga0466968_0010248 3300044735 Bacteria 3630
57 Ga0495627_000357 3300046453 Bacteria 42749
58 Ga0495643_0000136 3300046522 Bacteria 118429
59 Ga0496114_0024411 3300048917 Bacteria 4935
60 Ga0496114_0254573 3300048917 Bacteria 1545
61 Ga0496117_0000468 3300048920 Bacteria 67418
62 Ga0496117_0002894 3300048920 Bacteria 20783
63 Ga0496117_0078439 3300048920 Bacteria 2180
64 Ga0496118_0023936 3300048921 Bacteria 5287
65 Ga0496119_0002676 3300048922 Bacteria 19249
66 Ga0496119_0018657 3300048922 Bacteria 5150
67 Ga0496120_0000554 3300048923 Bacteria 56930
68 Ga0496120_0001996 3300048923 Bacteria 22213
69 Ga0496122_0003117 3300048925 Bacteria 22223
70 Ga0496122_0006268 3300048925 Bacteria 13738
71 Ga0496122_0049939 3300048925 Bacteria 3195
72 Ga0496122_0093787 3300048925 Bacteria 2035
73 Ga0496123_0006420 3300048926 Bacteria 11401
74 Ga0496124_0001567 3300048927 Bacteria 33061
75 Ga0496124_0025731 3300048927 Bacteria 5323
76 Ga0496125_0026678 3300048928 Bacteria 5254
77 Ga0496125_0059865 3300048928 Bacteria 3065
78 Ga0496126_0000998 3300048929 Bacteria 48229
79 Ga0496126_0005262 3300048929 Bacteria 14867
80 Ga0496126_0049679 3300048929 Bacteria 3828
81 Ga0501034_0001369 3300049571 Bacteria 32786
82 Ga0501034_0141322 3300049571 Bacteria 2387
83 Ga0501038_0007780 3300049574 Bacteria 9874
84 Ga0501038_0013853 3300049574 Bacteria 7348
85 Ga0501040_0055756 3300049576 Bacteria 2711
86 Ga0501070_0141604 3300049586 Bacteria 1986
87 nmdc:mga00v17_39329_c1 3300050491 Bacteria 2832
88 nmdc:mga00v17_71695_c1 3300050491 Bacteria 2148
89 nmdc:mga0yw44_3339_c1 3300050492 Bacteria 6156
90 nmdc:mga06z11_7382_c1 3300050494 Bacteria 4518
91 Ga0500650_0024882 3300053098 Bacteria 2673
92 Ga0500628_008023 3300053129 Bacteria 1824
93 Ga0500577_0011613 3300053142 Bacteria 2634
94 2887445447 2887443736 Bacteria 4426037
95 2588108367 2585428157 Bacteria 3018951
96 2643733732 2643221542 Bacteria 3563959
97 2643752005 2643221546 Bacteria 2910897
98 2643785722 2643221553 Bacteria 3544260
99 2643848416 2643221566 Bacteria 3460379
100 2643995879 2643221597 Bacteria 3347721
101 2644170307 2643221630 Bacteria 3601215
102 2644680134 2643221724 Bacteria 3593515
103 2729908085 2728369276 Bacteria 5610032
104 2730229584 2728369380 Bacteria 3620317
105 2739238633 2738543011 Bacteria 5731169
106 2747953594 2747842429 Bacteria 3914386
107 2774384386 2773857759 Bacteria 2963774
108 2774399668 2773857763 Bacteria 4180068
109 2784471558 2784132109 Bacteria 3141763
110 2808631316 2808606306 Bacteria 3608896
111 2809227404 2808606447 Bacteria 3572005
112 2812322981 2811994872 Bacteria 4121241
113 2821269885 2821268502 Bacteria 3750023
114 2835189844 2835188231 Bacteria 3476928
115 2848553913 2848551377 Bacteria 3720646
116 2852633217 2852632344 Bacteria 3463163
117 2852647221 2852646457 Bacteria 3408613
118 2852665204 2852663356 Bacteria 4090475
119 2852678945 2852677369 Bacteria 3768884
120 2855390056 2855386786 Bacteria 4752232
121 2857720311 2857720070 Bacteria 3189373
122 2857723732 2857723135 Bacteria 4217853
123 2857730471 2857729791 Bacteria 4040535
124 2862996793 2862993130 Bacteria 3860849
125 2870624444 2870622029 Bacteria 3643329
126 2889303067 2889300758 Bacteria 5690814
127 2893686072 2893684298 Bacteria 2897960
128 2897562964 2897561785 Bacteria 3256946
129 2906802915 2906799679 Bacteria 4031749
130 2920880893 2920879853 Bacteria 4216831
131 2928091852 2928090899 Bacteria 3158267
132 2928123717 2928121344 Bacteria 3972376
133 2932401025 2932398195 Bacteria 3847976
134 2939660750 2939657138 Bacteria 3740283
135 2939664222 2939660829 Bacteria 3784848
136 2939746055 2939743619 Bacteria 5762299
137 2945971692 2945968032 Bacteria 4111363
138 2946033857 2946033335 Bacteria 3835514
139 2946044149 2946041624 Bacteria 4191385
140 2946081008 2946080515 Bacteria 4310960
141 2966925482 2966924647 Bacteria 3268643
142 2977254026 2977251589 Bacteria 2952848
143 2984581386 2984580707 Bacteria 3351387
144 2995727327 2995726249 Bacteria 3470435
145 3001890526 3001889506 Bacteria 2975194
146 8004185217 8004182704 Bacteria 3391155
147 8004214166 8004212874 Bacteria 2861420
148 8045831070 8045830549 Bacteria 4444727
149 8055040874 8055037949 Bacteria 3337834
150 Ga0006562J51391_1019551
151 Ga0006562J51391_1019554
152 Ga0070697_100000075
153 Ga0070697_100122720
154 Ga0070686_100000109
155 Ga0070696_100041311
156 Ga0075365_10000907
157 Ga0075363_100031411
158 Ga0075364_10019532
159 Ga0075364_10033055
160 Ga0075364_10040605
161 Ga0075367_10009827
162 Ga0075369_10005587
163 Ga0075369_10030880
164 Ga0075431_100010378
165 Ga0105244_10002505
166 Ga0105245_10084582
167 Ga0105243_10000454
168 Ga0105243_10156161
169 Ga0213874_10002454
170 Ga0209646_1000099
171 Ga0207655_1002397
172 Ga0207709_10001865
173 Ga0307413_10059360
174 Ga0307410_10031314
175 Ga0307410_10091781
176 Ga0307406_10000568
177 Ga0307406_10004896
178 Ga0307406_10011678
179 Ga0307406_10020327
180 Ga0307409_100029941
181 Ga0307409_100179607
182 Ga0307409_100208982
183 Ga0307409_100254219
184 Ga0307416_100105048
185 Ga0307416_100221766
186 Ga0307414_10007486
187 Ga0307414_10048314
188 Ga0307414_10145726
189 Ga0307415_100018881
190 Ga0436364_0804350
191 Ga0436360_1185937
192 Ga0436363_0692759
193 Ga0436363_1288718
194 Ga0451789_1161712
195 Ga0451791_1131131
196 Ga0451793_0209052
197 Ga0451793_0503376
198 Ga0451793_0656105
199 Ga0451843_0643499
200 Ga0451853_0531891
201 Ga0466972_0022584
202 Ga0466965_0007379
203 Ga0466965_0014247
204 Ga0466965_0033262
205 Ga0466968_0010248
206 Ga0495627_000357
207 Ga0495643_0000136
208 Ga0496114_0024411
209 Ga0496114_0254573
210 Ga0496117_0000468
211 Ga0496117_0002894
212 Ga0496117_0078439
213 Ga0496118_0023936
214 Ga0496119_0002676
215 Ga0496119_0018657
216 Ga0496120_0000554
217 Ga0496120_0001996
218 Ga0496122_0003117
219 Ga0496122_0006268
220 Ga0496122_0049939
221 Ga0496122_0093787
222 Ga0496123_0006420
223 Ga0496124_0001567
224 Ga0496124_0025731
225 Ga0496125_0026678
226 Ga0496125_0059865
227 Ga0496126_0000998
228 Ga0496126_0005262
229 Ga0496126_0049679
230 Ga0501034_0001369
231 Ga0501034_0141322
232 Ga0501038_0007780
233 Ga0501038_0013853
234 Ga0501040_0055756
235 Ga0501070_0141604
236 nmdc:mga00v17_39329_c1
237 nmdc:mga00v17_71695_c1
238 nmdc:mga0yw44_3339_c1
239 nmdc:mga06z11_7382_c1
240 Ga0500650_0024882
241 Ga0500628_008023
242 Ga0500577_0011613
243 2887445447
244 2588108367
245 2643733732
246 2643752005
247 2643785722
248 2643848416
249 2643995879
250 2644170307
251 2644680134
252 2729908085
253 2730229584
254 2739238633
255 2747953594
256 2774384386
257 2774399668
258 2784471558
259 2808631316
260 2809227404
261 2812322981
262 2821269885
263 2835189844
264 2848553913
265 2852633217
266 2852647221
267 2852665204
268 2852678945
269 2855390056
270 2857720311
271 2857723732
272 2857730471
273 2862996793
274 2870624444
275 2889303067
276 2893686072
277 2897562964
278 2906802915
279 2920880893
280 2928091852
281 2928123717
282 2932401025
283 2939660750
284 2939664222
285 2939746055
286 2945971692
287 2946033857
288 2946044149
289 2946081008
290 2966925482
291 2977254026
292 2984581386
293 2995727327
294 3001890526
295 8004185217
296 8004214166
297 8045831070
298 8055040874

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00083

Sugar_tr

Sugar (and other) transporter

38

240

0.95

PF07690

MFS_1

Major Facilitator Superfamily

33

347

0.89

PF07690

MFS_1

Major Facilitator Superfamily

333

478

0.88

PF00083

Sugar_tr

Sugar (and other) transporter

268

480

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
8sc2-assembly1.cif.gz_A human oct1 bound to diltiazem in inward-open conformation 0.8994 47 437
8sc3-assembly1.cif.gz_A human oct1 bound to fenoterol in inward-open conformation 0.8959 47 441
8sc6-assembly1.cif.gz_A human oct1 bound to thiamine in inward-open conformation 0.8926 47 441
8sc1-assembly1.cif.gz_A human oct1 (apo) in inward-open conformation 0.8812 47 441
8sc4-assembly1.cif.gz_A human oct1 bound to metformin in inward-open conformation 0.8808 47 437
ID Description Score Start End Superfamily
af_Q54YF6_171_383_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9517 15 221 1.20.1250.20
af_A0A1D6MD70_48_293_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.947 18 220 1.20.1250.20
af_O96156_55_269_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9445 18 199 1.20.1250.20
af_P41036_15_224_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9439 17 208 1.20.1250.20
af_O23203_10_235_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9404 23 193 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A1Y3FHN5-F1-model_v4 Putative niacin/nicotinamide transporter NaiP 0.9861 274 449 GO:0016020
GO:0022857
AF-A0A1Y3FHN5-F1-model_v4 Putative niacin/nicotinamide transporter NaiP 0.9751 274 449 GO:0016020
GO:0022857
AF-A0A2G9MVK0-F1-model_v4 MFS transporter 0.9702 258 448 GO:0016020
GO:0022857
AF-A0A7W8S313-F1-model_v4 MFS family permease 0.9669 250 449 GO:0005886
GO:0046943
AF-A0A162RP24-F1-model_v4 deleted 0.9609 19 435

Map