F206964

General Info

Members Datasets Scaffolds Average Seq Length
149 123 149 107

Family's Representative Sequence

Representative Sequence 3300046616|Ga0495668_0564792|Ga0495668_0564792_126_449
Length 107
Sequence VARILAVAPDLMFASRIEATLGAAGHDVALANSLTEAPALESTDLLVVDLDREPAEATVGLGVPVLGFYAHLNVETREGAEAAGVDLVVPRSRMAREMPELAERLLA

Samples

Sample ID Description Type Environment
1 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
6 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
9 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
10 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
23 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
24 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
27 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
28 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
31 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
32 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
33 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
59 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
60 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
61 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
62 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
63 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
64 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
65 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
66 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
67 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
68 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
69 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
70 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
71 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
72 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
73 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
74 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
75 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
76 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
77 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
78 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
79 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
80 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
81 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
82 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
83 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
84 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
85 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
86 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
87 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
88 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
89 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
90 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
91 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
92 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
93 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
94 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
95 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
96 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
97 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
98 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
99 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
100 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
101 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
102 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
103 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
104 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
105 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
106 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
107 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
108 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
109 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
110 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
111 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
112 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
113 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
114 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
115 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
116 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
117 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
118 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
119 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
120 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
121 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
122 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
123 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.67
Nodule 0
Rhizoplane 15.44
Rhizosphere 79.19
Stem 0
Stem Tuber 0
Unclassified 4.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10003186 3300001979 Bacteria 7243
2 Ga0070683_100453654 3300005329 Bacteria 1223
3 Ga0070677_10000022 3300005333 Bacteria 45355
4 Ga0068868_100000450 3300005338 Bacteria 27515
5 Ga0070691_10000379 3300005341 Bacteria 16112
6 Ga0070703_10038768 3300005406 Bacteria 1474
7 Ga0070714_100996759 3300005435 Unclassified 815
8 Ga0070711_100000734 3300005439 Bacteria 17090
9 Ga0070700_100143507 3300005441 Unclassified 1625
10 Ga0070663_100024055 3300005455 Bacteria 4092
11 Ga0070663_101204224 3300005455 Bacteria 665
12 Ga0070681_10842255 3300005458 Unclassified 835
13 Ga0068867_100000796 3300005459 Bacteria 21356
14 Ga0070679_100448159 3300005530 Unclassified 1235
15 Ga0068853_100042402 3300005539 Bacteria 3891
16 Ga0070672_100001367 3300005543 Bacteria 15049
17 Ga0070695_100076867 3300005545 Bacteria 2199
18 Ga0070665_100513584 3300005548 Bacteria 1210
19 Ga0068854_100040165 3300005578 Bacteria 3300
20 Ga0068864_100000053 3300005618 Bacteria 133049
21 Ga0068861_100185142 3300005719 Unclassified 1736
22 Ga0068863_100010993 3300005841 Bacteria 8778
23 Ga0068862_100004868 3300005844 Bacteria 11306
24 Ga0075433_10000900 3300006852 Bacteria 20958
25 Ga0068865_100123957 3300006881 Bacteria 1926
26 Ga0111539_10914808 3300009094 Unclassified 1020
27 Ga0105245_10000020 3300009098 Bacteria 181774
28 Ga0105247_10000316 3300009101 Bacteria 43374
29 Ga0105247_10046632 3300009101 Bacteria 2660
30 Ga0105247_11047318 3300009101 Unclassified 640
31 Ga0105242_10000032 3300009176 Bacteria 98198
32 Ga0105242_10000454 3300009176 Bacteria 32662
33 Ga0105249_10000080 3300009553 Bacteria 138080
34 Ga0157378_10066419 3300013297 Bacteria 3231
35 Ga0157375_10001213 3300013308 Bacteria 22205
36 Ga0157379_10072798 3300014968 Bacteria 3075
37 Ga0157379_11071117 3300014968 Bacteria 771
38 Ga0207653_10052614 3300025885 Bacteria 1358
39 Ga0207682_10000005 3300025893 Bacteria 95617
40 Ga0207710_10000458 3300025900 Bacteria 26155
41 Ga0207707_10255808 3300025912 Bacteria 1520
42 Ga0207695_10635938 3300025913 Bacteria 948
43 Ga0207663_10000498 3300025916 Bacteria 17164
44 Ga0207652_10009957 3300025921 Bacteria 7653
45 Ga0207687_10000013 3300025927 Bacteria 299826
46 Ga0207664_10333168 3300025929 Bacteria 1341
47 Ga0207686_10000048 3300025934 Bacteria 115595
48 Ga0207686_10000447 3300025934 Bacteria 27400
49 Ga0207704_10215492 3300025938 Bacteria 1417
50 Ga0207665_10242431 3300025939 Bacteria 1328
51 Ga0207691_10003586 3300025940 Bacteria 15090
52 Ga0207661_10147525 3300025944 Bacteria 2031
53 Ga0207712_10000007 3300025961 Bacteria 539589
54 Ga0207640_10003186 3300025981 Bacteria 8830
55 Ga0207677_10000200 3300026023 Bacteria 48320
56 Ga0207639_10070507 3300026041 Bacteria 2730
57 Ga0207678_10006053 3300026067 Bacteria 10761
58 Ga0207678_11993125 3300026067 Bacteria 505
59 Ga0207708_10338951 3300026075 Bacteria 1231
60 Ga0207641_10004805 3300026088 Bacteria 11642
61 Ga0207648_10008647 3300026089 Bacteria 9832
62 Ga0207676_10000195 3300026095 Bacteria 52951
63 Ga0207683_10507497 3300026121 Bacteria 1114
64 Ga0268265_10069595 3300028380 Bacteria 2733
65 Ga0265319_1000020 3300028563 Bacteria 153921
66 Ga0265334_10072019 3300028573 Bacteria 1286
67 Ga0265338_10001248 3300028800 Bacteria 41926
68 Ga0265338_10498838 3300028800 Bacteria 857
69 Ga0265320_10362860 3300031240 Bacteria 640
70 Ga0265325_10027972 3300031241 Bacteria 3044
71 Ga0265331_10039701 3300031250 Bacteria 2294
72 Ga0307513_10422210 3300031456 Bacteria 1063
73 Ga0307416_100628696 3300032002 Bacteria 1156
74 Ga0316583_10267991 3300032133 Unclassified 591
75 Ga0316582_0640395 3300036647 Bacteria 731
76 Ga0451791_0781555 3300041451 Bacteria 1023
77 Ga0451802_1310530 3300041460 Bacteria 559
78 Ga0451853_2765288 3300041512 Bacteria 3303
79 Ga0466963_0225295 3300044694 Bacteria 1313
80 Ga0466967_0800594 3300045976 Unclassified 936
81 Ga0466967_1069266 3300045976 Bacteria 804
82 Ga0466967_1166160 3300045976 Bacteria 768
83 Ga0495592_0389916 3300046454 Bacteria 884
84 Ga0495592_0623763 3300046454 Unclassified 655
85 Ga0495629_0000509 3300046459 Bacteria 32652
86 Ga0495629_1117895 3300046459 Bacteria 509
87 Ga0495641_0000228 3300046461 Bacteria 43671
88 Ga0495641_0038335 3300046461 Bacteria 2239
89 Ga0495641_0334009 3300046461 Unclassified 684
90 Ga0495662_0007443 3300046476 Bacteria 5413
91 Ga0495608_0000529 3300046511 Bacteria 26174
92 Ga0495618_0566058 3300046514 Bacteria 679
93 Ga0495620_0000824 3300046515 Bacteria 19119
94 Ga0495628_0041865 3300046516 Bacteria 3655
95 Ga0495630_0544007 3300046517 Bacteria 890
96 Ga0495652_0000407 3300046529 Bacteria 50232
97 Ga0495652_0045375 3300046529 Bacteria 3779
98 Ga0495652_0414911 3300046529 Bacteria 950
99 Ga0495640_0036783 3300046533 Bacteria 3457
100 Ga0495587_0575283 3300046536 Bacteria 621
101 Ga0495621_0006858 3300046539 Bacteria 3350
102 Ga0495645_0006445 3300046543 Bacteria 8142
103 Ga0495645_0261561 3300046543 Bacteria 1145
104 Ga0495656_0001090 3300046615 Bacteria 8799
105 Ga0495668_0564792 3300046616 Unclassified 628
106 Ga0495625_0000756 3300046660 Bacteria 45145
107 Ga0495599_0074998 3300046678 Bacteria 2112
108 Ga0495647_0000156 3300046681 Bacteria 17539
109 Ga0495624_0000647 3300046690 Bacteria 27259
110 Ga0495649_0008541 3300046694 Bacteria 6154
111 Ga0495674_0000064 3300047319 Bacteria 71275
112 Ga0495676_0000130 3300047321 Bacteria 56693
113 Ga0495680_0029878 3300047322 Bacteria 4457
114 Ga0495602_0525896 3300048088 Bacteria 823
115 Ga0496100_0000005 3300048903 Bacteria 312112
116 Ga0496101_0000101 3300048904 Bacteria 89424
117 Ga0496101_1564038 3300048904 Bacteria 513
118 Ga0496102_0000115 3300048905 Bacteria 114224
119 Ga0496102_0170052 3300048905 Bacteria 2052
120 Ga0496103_0000008 3300048906 Bacteria 340474
121 Ga0496103_0585421 3300048906 Bacteria 711
122 Ga0496104_0000004 3300048907 Bacteria 641830
123 Ga0496104_0000009 3300048907 Bacteria 488055
124 Ga0496105_0000001 3300048908 Bacteria 1328178
125 Ga0496105_0000007 3300048908 Bacteria 339658
126 Ga0496105_0892086 3300048908 Unclassified 671
127 Ga0496106_0000682 3300048909 Bacteria 24335
128 Ga0496107_0000011 3300048910 Bacteria 201631
129 Ga0496108_0000587 3300048911 Bacteria 28462
130 Ga0496108_0029134 3300048911 Bacteria 4570
131 Ga0496109_0001118 3300048912 Bacteria 22284
132 Ga0496109_0071967 3300048912 Bacteria 3175
133 Ga0496112_0115785 3300048915 Bacteria 2651
134 Ga0496114_0000101 3300048917 Bacteria 61589
135 Ga0496115_0000200 3300048918 Bacteria 55755
136 Ga0496117_0464255 3300048920 Bacteria 623
137 Ga0496118_0167766 3300048921 Bacteria 1346
138 Ga0496119_0029762 3300048922 Bacteria 3693
139 Ga0496120_0018289 3300048923 Bacteria 4523
140 Ga0496121_0299337 3300048924 Unclassified 1092
141 Ga0501070_1008564 3300049586 Bacteria 645
142 Ga0501080_1725978 3300049742 Bacteria 528
143 Ga0501035_0374191 3300049822 Unclassified 1189
144 nmdc:mga0n895_1583896_c1 3300050512 Bacteria 620
145 nmdc:mga0a205_6_c1 3300050515 Bacteria 129758
146 Ga0495601_0198319 3300053077 Bacteria 1312
147 Ga0495601_0336389 3300053077 Unclassified 982
148 Ga0495619_0001204 3300053085 Bacteria 16989
149 Ga0500614_001338 3300053123 Bacteria 5937

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300032002 Ga0307416_100628696 Ga0307416_1006286962 96
2 3300046461 Ga0495641_0038335 Ga0495641_0038335_1937_2227 96
3 3300046615 Ga0495656_0001090 Ga0495656_0001090_1821_2111 96
4 3300048903 Ga0496100_0000005 Ga0496100_0000005_270188_270514 97
5 3300048904 Ga0496101_0000101 Ga0496101_0000101_60540_60866 97
6 3300048909 Ga0496106_0000682 Ga0496106_0000682_8381_8707 97
7 3300048910 Ga0496107_0000011 Ga0496107_0000011_41369_41695 97
8 3300026121 Ga0207683_10507497 Ga0207683_105074972 104
9 3300048915 Ga0496112_0115785 Ga0496112_0115785_838_1158 105
10 3300005329 Ga0070683_100453654 Ga0070683_1004536543 106
11 3300005338 Ga0068868_100000450 Ga0068868_10000045016 106
12 3300005455 Ga0070663_100024055 Ga0070663_1000240555 106
13 3300005455 Ga0070663_101204224 Ga0070663_1012042241 106
14 3300005458 Ga0070681_10842255 Ga0070681_108422552 106
15 3300005530 Ga0070679_100448159 Ga0070679_1004481592 106
16 3300005841 Ga0068863_100010993 Ga0068863_1000109939 106
17 3300006852 Ga0075433_10000900 Ga0075433_1000090014 106
18 3300009101 Ga0105247_10046632 Ga0105247_100466323 106
19 3300009176 Ga0105242_10000032 Ga0105242_1000003225 106
20 3300025912 Ga0207707_10255808 Ga0207707_102558081 106
21 3300025921 Ga0207652_10009957 Ga0207652_100099571 106
22 3300025934 Ga0207686_10000048 Ga0207686_1000004825 106
23 3300025944 Ga0207661_10147525 Ga0207661_101475253 106
24 3300026023 Ga0207677_10000200 Ga0207677_1000020034 106
25 3300026067 Ga0207678_10006053 Ga0207678_1000605312 106
26 3300026067 Ga0207678_11993125 Ga0207678_119931251 106
27 3300026088 Ga0207641_10004805 Ga0207641_100048054 106
28 3300028573 Ga0265334_10072019 Ga0265334_100720192 106
29 3300028800 Ga0265338_10498838 Ga0265338_104988382 106
30 3300036647 Ga0316582_0640395 Ga0316582_0640395_299_619 106
31 3300045976 Ga0466967_1166160 Ga0466967_1166160_14_334 106
32 3300046454 Ga0495592_0389916 Ga0495592_0389916_431_751 106
33 3300046459 Ga0495629_0000509 Ga0495629_0000509_1226_1546 106
34 3300046529 Ga0495652_0000407 Ga0495652_0000407_24343_24663 106
35 3300046536 Ga0495587_0575283 Ga0495587_0575283_265_585 106
36 3300046616 Ga0495668_0564792 Ga0495668_0564792_126_449 106
37 3300046678 Ga0495599_0074998 Ga0495599_0074998_1518_1838 106
38 3300048904 Ga0496101_1564038 Ga0496101_1564038_148_468 106
39 3300048905 Ga0496102_0000115 Ga0496102_0000115_98941_99261 106
40 3300048905 Ga0496102_0170052 Ga0496102_0170052_109_429 106
41 3300048906 Ga0496103_0000008 Ga0496103_0000008_105966_106286 106
42 3300048908 Ga0496105_0892086 Ga0496105_0892086_176_496 106
43 3300048921 Ga0496118_0167766 Ga0496118_0167766_210_530 106
44 3300048923 Ga0496120_0018289 Ga0496120_0018289_2133_2453 106
45 3300048924 Ga0496121_0299337 Ga0496121_0299337_16_336 106
46 3300049586 Ga0501070_1008564 Ga0501070_1008564_290_610 106
47 3300049742 Ga0501080_1725978 Ga0501080_1725978_23_343 106
48 3300049822 Ga0501035_0374191 Ga0501035_0374191_172_492 106
49 3300050515 nmdc:mga0a205_6_c1 nmdc:mga0a205_6_c1_113605_113925 106
50 3300053077 Ga0495601_0336389 Ga0495601_0336389_359_679 106
51 3300005333 Ga0070677_10000022 Ga0070677_1000002236 107
52 3300005341 Ga0070691_10000379 Ga0070691_100003799 107
53 3300005406 Ga0070703_10038768 Ga0070703_100387682 107
54 3300005435 Ga0070714_100996759 Ga0070714_1009967592 107
55 3300005439 Ga0070711_100000734 Ga0070711_1000007346 107
56 3300005539 Ga0068853_100042402 Ga0068853_1000424022 107
57 3300005543 Ga0070672_100001367 Ga0070672_1000013677 107
58 3300005545 Ga0070695_100076867 Ga0070695_1000768673 107
59 3300005548 Ga0070665_100513584 Ga0070665_1005135843 107
60 3300005618 Ga0068864_100000053 Ga0068864_100000053103 107
61 3300005719 Ga0068861_100185142 Ga0068861_1001851421 107
62 3300013308 Ga0157375_10001213 Ga0157375_100012139 107
63 3300025885 Ga0207653_10052614 Ga0207653_100526143 107
64 3300025893 Ga0207682_10000005 Ga0207682_1000000545 107
65 3300025913 Ga0207695_10635938 Ga0207695_106359382 107
66 3300025916 Ga0207663_10000498 Ga0207663_100004986 107
67 3300025929 Ga0207664_10333168 Ga0207664_103331683 107
68 3300025940 Ga0207691_10003586 Ga0207691_1000358612 107
69 3300026041 Ga0207639_10070507 Ga0207639_100705072 107
70 3300026095 Ga0207676_10000195 Ga0207676_1000019533 107
71 3300028563 Ga0265319_1000020 Ga0265319_1000020138 107
72 3300028800 Ga0265338_10001248 Ga0265338_100012481 107
73 3300031240 Ga0265320_10362860 Ga0265320_103628602 107
74 3300031241 Ga0265325_10027972 Ga0265325_100279724 107
75 3300031250 Ga0265331_10039701 Ga0265331_100397013 107
76 3300031456 Ga0307513_10422210 Ga0307513_104222102 107
77 3300032133 Ga0316583_10267991 Ga0316583_102679912 107
78 3300041451 Ga0451791_0781555 Ga0451791_0781555_550_873 107
79 3300041512 Ga0451853_2765288 Ga0451853_2765288_789_1112 107
80 3300046454 Ga0495592_0623763 Ga0495592_0623763_149_472 107
81 3300046459 Ga0495629_1117895 Ga0495629_1117895_137_460 107
82 3300046461 Ga0495641_0000228 Ga0495641_0000228_14187_14510 107
83 3300046511 Ga0495608_0000529 Ga0495608_0000529_23708_24031 107
84 3300046515 Ga0495620_0000824 Ga0495620_0000824_17155_17478 107
85 3300046517 Ga0495630_0544007 Ga0495630_0544007_43_366 107
86 3300046529 Ga0495652_0414911 Ga0495652_0414911_281_604 107
87 3300046533 Ga0495640_0036783 Ga0495640_0036783_2309_2632 107
88 3300046539 Ga0495621_0006858 Ga0495621_0006858_1236_1559 107
89 3300046543 Ga0495645_0261561 Ga0495645_0261561_519_842 107
90 3300046660 Ga0495625_0000756 Ga0495625_0000756_2989_3312 107
91 3300046681 Ga0495647_0000156 Ga0495647_0000156_14695_15018 107
92 3300046690 Ga0495624_0000647 Ga0495624_0000647_7632_7955 107
93 3300046694 Ga0495649_0008541 Ga0495649_0008541_1388_1711 107
94 3300047319 Ga0495674_0000064 Ga0495674_0000064_44384_44707 107
95 3300047321 Ga0495676_0000130 Ga0495676_0000130_21059_21382 107
96 3300047322 Ga0495680_0029878 Ga0495680_0029878_2297_2620 107
97 3300048906 Ga0496103_0585421 Ga0496103_0585421_26_349 107
98 3300048917 Ga0496114_0000101 Ga0496114_0000101_26200_26523 107
99 3300048918 Ga0496115_0000200 Ga0496115_0000200_29233_29556 107
100 3300048920 Ga0496117_0464255 Ga0496117_0464255_26_349 107
101 3300053077 Ga0495601_0198319 Ga0495601_0198319_893_1216 107
102 3300053085 Ga0495619_0001204 Ga0495619_0001204_12746_13069 107
103 3300053123 Ga0500614_001338 Ga0500614_001338_663_986 107
104 3300001979 JGI24740J21852_10003186 JGI24740J21852_100031865 108
105 3300005441 Ga0070700_100143507 Ga0070700_1001435073 108
106 3300005459 Ga0068867_100000796 Ga0068867_1000007967 108
107 3300005578 Ga0068854_100040165 Ga0068854_1000401655 108
108 3300005844 Ga0068862_100004868 Ga0068862_1000048684 108
109 3300006881 Ga0068865_100123957 Ga0068865_1001239572 108
110 3300009094 Ga0111539_10914808 Ga0111539_109148082 108
111 3300009098 Ga0105245_10000020 Ga0105245_1000002016 108
112 3300009101 Ga0105247_10000316 Ga0105247_1000031626 108
113 3300009101 Ga0105247_11047318 Ga0105247_110473182 108
114 3300009176 Ga0105242_10000454 Ga0105242_100004544 108
115 3300009553 Ga0105249_10000080 Ga0105249_1000008039 108
116 3300013297 Ga0157378_10066419 Ga0157378_100664194 108
117 3300014968 Ga0157379_10072798 Ga0157379_100727983 108
118 3300014968 Ga0157379_11071117 Ga0157379_110711172 108
119 3300025900 Ga0207710_10000458 Ga0207710_100004587 108
120 3300025927 Ga0207687_10000013 Ga0207687_1000001358 108
121 3300025934 Ga0207686_10000447 Ga0207686_1000044717 108
122 3300025938 Ga0207704_10215492 Ga0207704_102154923 108
123 3300025939 Ga0207665_10242431 Ga0207665_102424312 108
124 3300025961 Ga0207712_10000007 Ga0207712_10000007432 108
125 3300025981 Ga0207640_10003186 Ga0207640_100031867 108
126 3300026075 Ga0207708_10338951 Ga0207708_103389511 108
127 3300026089 Ga0207648_10008647 Ga0207648_100086475 108
128 3300028380 Ga0268265_10069595 Ga0268265_100695952 108
129 3300041460 Ga0451802_1310530 Ga0451802_1310530_144_470 108
130 3300044694 Ga0466963_0225295 Ga0466963_0225295_126_464 108
131 3300045976 Ga0466967_0800594 Ga0466967_0800594_528_866 108
132 3300045976 Ga0466967_1069266 Ga0466967_1069266_37_375 108
133 3300046461 Ga0495641_0334009 Ga0495641_0334009_340_666 108
134 3300046476 Ga0495662_0007443 Ga0495662_0007443_3121_3453 108
135 3300046514 Ga0495618_0566058 Ga0495618_0566058_175_516 108
136 3300046516 Ga0495628_0041865 Ga0495628_0041865_1826_2152 108
137 3300046529 Ga0495652_0045375 Ga0495652_0045375_1224_1550 108
138 3300046543 Ga0495645_0006445 Ga0495645_0006445_5843_6169 108
139 3300048088 Ga0495602_0525896 Ga0495602_0525896_180_506 108
140 3300048907 Ga0496104_0000004 Ga0496104_0000004_357402_357728 108
141 3300048907 Ga0496104_0000009 Ga0496104_0000009_295998_296327 108
142 3300048908 Ga0496105_0000001 Ga0496105_0000001_284103_284429 108
143 3300048908 Ga0496105_0000007 Ga0496105_0000007_191729_192058 108
144 3300048911 Ga0496108_0000587 Ga0496108_0000587_1930_2256 108
145 3300048911 Ga0496108_0029134 Ga0496108_0029134_1386_1718 108
146 3300048912 Ga0496109_0001118 Ga0496109_0001118_11833_12159 108
147 3300048912 Ga0496109_0071967 Ga0496109_0071967_2800_3132 108
148 3300048922 Ga0496119_0029762 Ga0496119_0029762_2323_2649 108
149 3300050512 nmdc:mga0n895_1583896_c1 nmdc:mga0n895_1583896_c1_222_548 108

Structural Annotation

Top 5 Hits

ID Description Score Start End
5m7n-assembly1.cif.gz_A crystal structure of ntrx from brucella abortus in complex with atp processed with the crystaldirect automated mounting and cryo-cooling technology 0.8806 2 107
1zh4-assembly1.cif.gz_A crystal structure of the mg+2/bef3-bound receiver domain of kdp potassium transport system response regulator kdpe 0.8753 1 107
1nxp-assembly1.cif.gz_A micarec ph4.5 0.8744 3 108
4kfc-assembly1.cif.gz_A crystal structure of a hyperactive mutant of response regulator kdpe complexed to its promoter dna 0.8732 1 107
4kny-assembly1.cif.gz_A crystal structure of the response regulator kdpe complexed to dna in an active-like conformation 0.8718 1 106
ID Description Score Start End Superfamily
2v0nA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8808 2 107 3.40.50.2300
2v0nA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8582 2 107 3.40.50.2300
1nxoA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8505 3 107 3.40.50.2300
3dzdB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8494 3 107 3.40.50.2300
af_Q54SP4_555_700_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.849 2 107 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A1Q3NHY8-F1-model_v4 deleted 0.9302 12 105
AF-A0A538J092-F1-model_v4 Response regulatory domain-containing protein 0.9291 38 105 GO:0000160
AF-A0A7C3U1G2-F1-model_v4 Response regulator 0.9152 2 106 GO:0000160
AF-A0A1Q3NHY8-F1-model_v4 deleted 0.9113 12 105
AF-A0A7V4ASC0-F1-model_v4 Response regulator transcription factor 0.9077 3 107 GO:0000160

Feature Viewer

pLDDT pTM Quality
92 0.86 High
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Predicted Structure (AlphaFold2)

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