F206617

General Info

Members Datasets Scaffolds Average Seq Length
149 108 148 393

Family's Representative Sequence

Representative Sequence 3300037312|Ga0395899_0000004|Ga0395899_0000004_391809_393095
Length 428
Sequence MRAATLVRAGLPAKLDPWFSKGEGRVTDHLSGPFTRRRMLQGSAVAGLAGLGGCATAFGGAGRPPAYDRPPPLAPIWARPDRLFDLTVCLRPFRAAGPRLDVERIGDALVVHNYGYGGSGWSLSWGGATLAVAKAMADSPREVAVIGCGAIGLTSAIVAQRAGASVTIYAKELLPQTRSARATGIWTPDSRIALSNVAAPGFAETWEQMARTSFKAYRNYLGLPGTPVEWIDHYSLQAHPRGQGGSPARAPGELDFAEYADRIRDLTPRSQLVPAGAAPFDAPFVYRNGLLMFNIADYGHTLLTDFLGAGGRIQIREFHTPSEIAALPEKVVINCPGYGGRALWKDQTVVPVRGQIGWLIPQPEVNYGLYYKQVSVIPRRDGIVVQAVEGGDMKGYDDANETVDRAESERAVATIAELYSRFRPARRG

Samples

Sample ID Description Type Environment
1 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
2 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
3 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
4 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
21 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
25 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
30 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
31 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
32 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
35 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
36 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
37 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
59 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
60 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
61 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
62 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
63 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
64 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
65 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
66 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
67 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
68 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
69 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
70 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
71 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
72 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
73 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
74 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
75 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
76 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
77 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
78 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
79 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
80 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
81 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
82 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
83 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
84 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
85 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
86 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
87 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
88 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
89 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
90 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
91 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
92 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
93 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
94 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
95 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
96 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
97 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
98 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
99 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
100 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
101 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
102 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
103 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
104 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
105 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
106 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
107 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
108 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.33
Metatranscriptomes 0
Isolates 0.67

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.38
Nodule 0
Rhizoplane 0.67
Rhizosphere 87.25
Stem 0
Stem Tuber 0
Unclassified 4.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055536_1003644 3300003781 Bacteria 8204
2 Ga0065165_1000083 3300005262 Bacteria 156204
3 Ga0065704_10135131 3300005289 Unclassified 1561
4 Ga0070658_10001886 3300005327 Bacteria 17679
5 Ga0070666_10000560 3300005335 Bacteria 22474
6 Ga0070680_100005329 3300005336 Bacteria 9728
7 Ga0070680_100010459 3300005336 Bacteria 7155
8 Ga0070689_100205018 3300005340 Bacteria 1612
9 Ga0070691_10003039 3300005341 Bacteria 7508
10 Ga0070673_100018112 3300005364 Bacteria 5027
11 Ga0070667_100137324 3300005367 Bacteria 2138
12 Ga0070678_100181207 3300005456 Bacteria 1724
13 Ga0070681_10000002 3300005458 Bacteria 821814
14 Ga0070681_10000625 3300005458 Bacteria 29017
15 Ga0068867_100067438 3300005459 Bacteria 2668
16 Ga0070679_100000035 3300005530 Bacteria 103095
17 Ga0070679_100004745 3300005530 Bacteria 12537
18 Ga0068853_100168960 3300005539 Bacteria 1978
19 Ga0068853_100267257 3300005539 Bacteria 1574
20 Ga0068855_100000038 3300005563 Bacteria 157738
21 Ga0068857_100031142 3300005577 Bacteria 4714
22 Ga0068857_100151698 3300005577 Bacteria 2100
23 Ga0081455_10012658 3300005937 Bacteria 8399
24 Ga0075366_10035024 3300006195 Bacteria 2959
25 Ga0097621_100069988 3300006237 Bacteria 2897
26 Ga0075431_100158550 3300006847 Bacteria 2328
27 Ga0105240_10007403 3300009093 Bacteria 15957
28 Ga0105240_10019410 3300009093 Bacteria 9082
29 Ga0105240_10044279 3300009093 Bacteria 5657
30 Ga0105241_10115847 3300009174 Bacteria 2151
31 Ga0105241_10333083 3300009174 Bacteria 1313
32 Ga0105242_10139136 3300009176 Bacteria 2104
33 Ga0105242_10229583 3300009176 Bacteria 1663
34 Ga0105248_10000001 3300009177 Bacteria 1881304
35 Ga0105237_10066035 3300009545 Bacteria 3613
36 Ga0105237_10130391 3300009545 Bacteria 2509
37 Ga0105238_10007926 3300009551 Bacteria 10625
38 Ga0105238_10029718 3300009551 Bacteria 5566
39 Ga0105238_10034482 3300009551 Bacteria 5149
40 Ga0105238_10121396 3300009551 Bacteria 2592
41 Ga0105238_10496160 3300009551 Bacteria 1221
42 Ga0105239_10009939 3300010375 Bacteria 10682
43 Ga0105239_10013755 3300010375 Bacteria 8981
44 Ga0105246_10072987 3300011119 Bacteria 2421
45 Ga0157371_10121729 3300013102 Unclassified 1856
46 Ga0157370_10060802 3300013104 Bacteria 3585
47 Ga0157370_10079371 3300013104 Bacteria 3091
48 Ga0157370_10221219 3300013104 Bacteria 1753
49 Ga0157370_10240281 3300013104 Bacteria 1676
50 Ga0157369_10012438 3300013105 Bacteria 9660
51 Ga0157369_10018818 3300013105 Bacteria 7741
52 Ga0157378_10025389 3300013297 Bacteria 5218
53 Ga0213872_10002639 3300021361 Bacteria 10419
54 Ga0213876_10000131 3300021384 Bacteria 81694
55 Ga0209676_1004930 3300025292 Bacteria 7183
56 Ga0207642_10081795 3300025899 Bacteria 1571
57 Ga0207688_10087275 3300025901 Bacteria 1788
58 Ga0207680_10000479 3300025903 Bacteria 18923
59 Ga0207645_10056345 3300025907 Bacteria 2509
60 Ga0207705_10001262 3300025909 Bacteria 20315
61 Ga0207707_10000002 3300025912 Bacteria 1142054
62 Ga0207707_10074045 3300025912 Bacteria 2970
63 Ga0207695_10000012 3300025913 Bacteria 840961
64 Ga0207695_10033971 3300025913 Bacteria 5552
65 Ga0207660_10000299 3300025917 Bacteria 32732
66 Ga0207660_10007452 3300025917 Bacteria 7079
67 Ga0207652_10000932 3300025921 Bacteria 27504
68 Ga0207652_10006807 3300025921 Bacteria 9212
69 Ga0207694_10000006 3300025924 Bacteria 631109
70 Ga0207694_10082400 3300025924 Bacteria 2529
71 Ga0207686_10142607 3300025934 Bacteria 1658
72 Ga0207670_10170791 3300025936 Bacteria 1630
73 Ga0207711_10000001 3300025941 Bacteria 1325674
74 Ga0207689_10058841 3300025942 Bacteria 3161
75 Ga0207667_10000106 3300025949 Bacteria 133162
76 Ga0207667_10002364 3300025949 Bacteria 23627
77 Ga0207651_10010651 3300025960 Bacteria 5107
78 Ga0207651_10149670 3300025960 Bacteria 1815
79 Ga0207639_10045574 3300026041 Bacteria 3304
80 Ga0207639_10152359 3300026041 Bacteria 1938
81 Ga0207702_10163613 3300026078 Bacteria 2034
82 Ga0207648_10090448 3300026089 Bacteria 2674
83 Ga0207674_10049737 3300026116 Bacteria 4285
84 Ga0265318_10000125 3300028577 Bacteria 70978
85 Ga0307517_10087250 3300028786 Bacteria 2594
86 Ga0265338_10000011 3300028800 Bacteria 433370
87 Ga0265338_10034557 3300028800 Bacteria 4883
88 Ga0265332_10016011 3300031238 Bacteria 3309
89 Ga0265328_10001062 3300031239 Bacteria 12656
90 Ga0265325_10000002 3300031241 Bacteria 396758
91 Ga0265325_10036105 3300031241 Bacteria 2621
92 Ga0265340_10009505 3300031247 Bacteria 5215
93 Ga0265339_10000210 3300031249 Bacteria 48022
94 Ga0265331_10007067 3300031250 Bacteria 6546
95 Ga0265313_10003445 3300031595 Bacteria 12798
96 Ga0265314_10002397 3300031711 Bacteria 19269
97 Ga0265342_10004548 3300031712 Bacteria 10857
98 Ga0307516_10033167 3300031730 Bacteria 5197
99 Ga0307405_10000810 3300031731 Bacteria 12300
100 Ga0307405_10002730 3300031731 Bacteria 7902
101 Ga0307412_10024428 3300031911 Bacteria 3730
102 Ga0307412_10096237 3300031911 Bacteria 2083
103 Ga0307412_10206767 3300031911 Bacteria 1495
104 Ga0307510_10006711 3300033180 Bacteria 13720
105 Ga0307510_10172580 3300033180 Bacteria 1738
106 Ga0373955_0109639 3300035172 Bacteria 1595
107 Ga0395899_0000004 3300037312 Bacteria 874267
108 Ga0395900_0004921 3300037418 Bacteria 14064
109 Ga0395900_0042326 3300037418 Bacteria 4693
110 Ga0395898_0006982 3300037466 Bacteria 12005
111 Ga0395901_0001801 3300038443 Bacteria 22128
112 Ga0436365_0583194 3300039437 Bacteria 93933
113 Ga0436361_0572639 3300039447 Bacteria 9380
114 Ga0436363_0504492 3300039450 Bacteria 6140
115 Ga0451576_0148291 3300045051 Bacteria 2446
116 Ga0495638_0000012 3300046460 Bacteria 435577
117 Ga0495580_0116733 3300046472 Bacteria 1854
118 Ga0495664_0042434 3300046477 Bacteria 2694
119 Ga0495664_0127043 3300046477 Bacteria 1543
120 Ga0495583_0000411 3300046506 Bacteria 65040
121 Ga0495583_0015941 3300046506 Bacteria 4063
122 Ga0495632_0002062 3300046519 Bacteria 15782
123 Ga0495648_0000038 3300046524 Bacteria 191612
124 Ga0495648_0124593 3300046524 Bacteria 1379
125 Ga0495652_0063784 3300046529 Bacteria 3101
126 Ga0495652_0139246 3300046529 Bacteria 1910
127 Ga0495633_0006723 3300046558 Bacteria 6769
128 Ga0495668_0025445 3300046616 Bacteria 3363
129 Ga0495661_0015048 3300046665 Bacteria 5171
130 Ga0495661_0126495 3300046665 Unclassified 1406
131 Ga0495599_0110802 3300046678 Bacteria 1710
132 Ga0495613_0007657 3300046689 Bacteria 8038
133 Ga0495671_0000034 3300046692 Bacteria 195385
134 Ga0495673_0000013 3300047469 Bacteria 612902
135 Ga0496115_0011945 3300048918 Bacteria 6522
136 Ga0495682_0019469 3300049460 Bacteria 2552
137 Ga0495682_0030702 3300049460 Bacteria 1987
138 Ga0501073_0160124 3300049589 Bacteria 1560
139 Ga0501238_006537 3300049671 Bacteria 1504
140 Ga0501080_0011999 3300049742 Bacteria 7935
141 nmdc:mga0k408_10382_c1 3300050493 Bacteria 5036
142 Ga0500651_0000008 3300053093 Bacteria 287738
143 Ga0500562_001359 3300053108 Bacteria 6037
144 Ga0500562_013862 3300053108 Bacteria 2061
145 Ga0500572_001201 3300053111 Bacteria 7376
146 Ga0500577_0022523 3300053142 Bacteria 2092
147 Ga0500624_000005 3300053157 Bacteria 187122
148 Ga0501084_0000288 3300054114 Bacteria 38135

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009174 Ga0105241_10333083 Ga0105241_103330832 330
2 3300021361 Ga0213872_10002639 Ga0213872_100026393 340
3 3300039447 Ga0436361_0572639 Ga0436361_0572639_3444_4664 340
4 3300011119 Ga0105246_10072987 Ga0105246_100729872 343
5 3300031239 Ga0265328_10001062 Ga0265328_1000106212 348
6 3300005335 Ga0070666_10000560 Ga0070666_1000056029 350
7 3300005367 Ga0070667_100137324 Ga0070667_1001373242 350
8 3300025903 Ga0207680_10000479 Ga0207680_100004792 350
9 3300049742 Ga0501080_0011999 Ga0501080_0011999_6217_7383 351
10 3300005336 Ga0070680_100005329 Ga0070680_1000053297 352
11 3300005458 Ga0070681_10000002 Ga0070681_10000002514 352
12 3300005530 Ga0070679_100000035 Ga0070679_10000003571 352
13 3300010375 Ga0105239_10009939 Ga0105239_1000993911 352
14 3300025912 Ga0207707_10000002 Ga0207707_10000002444 352
15 3300025917 Ga0207660_10000299 Ga0207660_100002992 352
16 3300025921 Ga0207652_10000932 Ga0207652_1000093230 352
17 3300053108 Ga0500562_001359 Ga0500562_001359_3513_4694 354
18 3300006847 Ga0075431_100158550 Ga0075431_1001585502 358
19 3300053142 Ga0500577_0022523 Ga0500577_0022523_92_1306 358
20 3300005340 Ga0070689_100205018 Ga0070689_1002050182 362
21 3300025936 Ga0207670_10170791 Ga0207670_101707912 362
22 3300005577 Ga0068857_100031142 Ga0068857_1000311423 363
23 3300005937 Ga0081455_10012658 Ga0081455_100126582 363
24 3300026116 Ga0207674_10049737 Ga0207674_100497372 363
25 3300037418 Ga0395900_0004921 Ga0395900_0004921_6359_7528 363
26 3300037466 Ga0395898_0006982 Ga0395898_0006982_5998_7167 363
27 3300037418 Ga0395900_0042326 Ga0395900_0042326_283_1455 364
28 3300038443 Ga0395901_0001801 Ga0395901_0001801_15041_16213 364
29 3300053157 Ga0500624_000005 Ga0500624_000005_155204_156652 364
30 3300005327 Ga0070658_10001886 Ga0070658_100018866 365
31 3300005336 Ga0070680_100010459 Ga0070680_1000104595 365
32 3300005341 Ga0070691_10003039 Ga0070691_100030393 365
33 3300005458 Ga0070681_10000625 Ga0070681_1000062524 365
34 3300005530 Ga0070679_100004745 Ga0070679_1000047453 365
35 3300009093 Ga0105240_10007403 Ga0105240_100074036 365
36 3300009551 Ga0105238_10496160 Ga0105238_104961601 365
37 3300021384 Ga0213876_10000131 Ga0213876_1000013140 365
38 3300025909 Ga0207705_10001262 Ga0207705_100012622 365
39 3300025912 Ga0207707_10074045 Ga0207707_100740451 365
40 3300025917 Ga0207660_10007452 Ga0207660_100074525 365
41 3300025921 Ga0207652_10006807 Ga0207652_100068074 365
42 3300025949 Ga0207667_10002364 Ga0207667_1000236412 365
43 3300039437 Ga0436365_0583194 Ga0436365_0583194_73907_75055 365
44 3300009176 Ga0105242_10229583 Ga0105242_102295832 366
45 3300025934 Ga0207686_10142607 Ga0207686_101426072 366
46 3300039450 Ga0436363_0504492 Ga0436363_0504492_1453_2601 366
47 3300046477 Ga0495664_0042434 Ga0495664_0042434_990_2159 366
48 3300046477 Ga0495664_0127043 Ga0495664_0127043_247_1419 366
49 3300046529 Ga0495652_0063784 Ga0495652_0063784_1168_2340 366
50 3300046529 Ga0495652_0139246 Ga0495652_0139246_412_1581 366
51 3300046678 Ga0495599_0110802 Ga0495599_0110802_406_1575 366
52 3300006195 Ga0075366_10035024 Ga0075366_100350242 367
53 3300009177 Ga0105248_10000001 Ga0105248_100000011365 367
54 3300013105 Ga0157369_10018818 Ga0157369_100188188 367
55 3300025941 Ga0207711_10000001 Ga0207711_10000001507 367
56 3300049589 Ga0501073_0160124 Ga0501073_0160124_285_1454 367
57 3300050493 nmdc:mga0k408_10382_c1 nmdc:mga0k408_10382_c1_1650_2858 367
58 3300009093 Ga0105240_10019410 Ga0105240_100194106 368
59 3300025913 Ga0207695_10033971 Ga0207695_100339714 368
60 3300028800 Ga0265338_10000011 Ga0265338_10000011459 368
61 3300031238 Ga0265332_10016011 Ga0265332_100160111 368
62 3300031241 Ga0265325_10000002 Ga0265325_10000002127 368
63 3300031249 Ga0265339_10000210 Ga0265339_1000021016 368
64 3300031250 Ga0265331_10007067 Ga0265331_100070675 368
65 3300031595 Ga0265313_10003445 Ga0265313_1000344512 368
66 3300031712 Ga0265342_10004548 Ga0265342_1000454810 368
67 3300031731 Ga0307405_10000810 Ga0307405_1000081012 368
68 3300031911 Ga0307412_10024428 Ga0307412_100244283 368
69 3300048918 Ga0496115_0011945 Ga0496115_0011945_4541_5767 368
70 3300054114 Ga0501084_0000288 Ga0501084_0000288_6902_8068 368
71 3300005539 Ga0068853_100168960 Ga0068853_1001689602 369
72 3300005539 Ga0068853_100267257 Ga0068853_1002672572 369
73 3300005563 Ga0068855_100000038 Ga0068855_10000003879 369
74 3300009093 Ga0105240_10044279 Ga0105240_100442797 369
75 3300009174 Ga0105241_10115847 Ga0105241_101158473 369
76 3300009545 Ga0105237_10066035 Ga0105237_100660355 369
77 3300009551 Ga0105238_10029718 Ga0105238_100297185 369
78 3300009551 Ga0105238_10034482 Ga0105238_100344823 369
79 3300010375 Ga0105239_10013755 Ga0105239_100137559 369
80 3300013105 Ga0157369_10012438 Ga0157369_100124388 369
81 3300025913 Ga0207695_10000012 Ga0207695_10000012574 369
82 3300025924 Ga0207694_10000006 Ga0207694_1000000691 369
83 3300025949 Ga0207667_10000106 Ga0207667_1000010686 369
84 3300026041 Ga0207639_10045574 Ga0207639_100455742 369
85 3300026041 Ga0207639_10152359 Ga0207639_101523591 369
86 3300028577 Ga0265318_10000125 Ga0265318_1000012561 369
87 3300031241 Ga0265325_10036105 Ga0265325_100361052 369
88 3300031730 Ga0307516_10033167 Ga0307516_100331677 369
89 3300045051 Ga0451576_0148291 Ga0451576_0148291_1210_2358 369
90 3300049460 Ga0495682_0030702 Ga0495682_0030702_768_1940 369
91 3300009545 Ga0105237_10130391 Ga0105237_101303912 370
92 3300035172 Ga0373955_0109639 Ga0373955_0109639_40_1248 370
93 3300046460 Ga0495638_0000012 Ga0495638_0000012_127486_128694 370
94 3300046472 Ga0495580_0116733 Ga0495580_0116733_450_1658 370
95 3300046506 Ga0495583_0000411 Ga0495583_0000411_1565_2773 370
96 3300046519 Ga0495632_0002062 Ga0495632_0002062_12992_14200 370
97 3300046524 Ga0495648_0000038 Ga0495648_0000038_62919_64127 370
98 3300046558 Ga0495633_0006723 Ga0495633_0006723_5483_6691 370
99 3300046692 Ga0495671_0000034 Ga0495671_0000034_62247_63455 370
100 3300047469 Ga0495673_0000013 Ga0495673_0000013_134948_136156 370
101 3300046689 Ga0495613_0007657 Ga0495613_0007657_245_1477 371
102 3300053111 Ga0500572_001201 Ga0500572_001201_716_1924 371
103 3300031911 Ga0307412_10096237 Ga0307412_100962372 372
104 3300005459 Ga0068867_100067438 Ga0068867_1000674383 373
105 3300005577 Ga0068857_100151698 Ga0068857_1001516982 373
106 3300009176 Ga0105242_10139136 Ga0105242_101391362 373
107 3300025899 Ga0207642_10081795 Ga0207642_100817952 373
108 3300025901 Ga0207688_10087275 Ga0207688_100872752 373
109 3300025942 Ga0207689_10058841 Ga0207689_100588413 373
110 3300025960 Ga0207651_10149670 Ga0207651_101496702 373
111 3300026089 Ga0207648_10090448 Ga0207648_100904482 373
112 3300053108 Ga0500562_013862 Ga0500562_013862_690_1880 373
113 3300005364 Ga0070673_100018112 Ga0070673_1000181122 374
114 3300006237 Ga0097621_100069988 Ga0097621_1000699882 374
115 3300013297 Ga0157378_10025389 Ga0157378_100253893 374
116 3300025907 Ga0207645_10056345 Ga0207645_100563452 374
117 3300025960 Ga0207651_10010651 Ga0207651_100106512 374
118 3300028800 Ga0265338_10034557 Ga0265338_100345575 374
119 3300031247 Ga0265340_10009505 Ga0265340_100095054 374
120 3300031711 Ga0265314_10002397 Ga0265314_1000239720 374
121 3300028786 Ga0307517_10087250 Ga0307517_100872502 375
122 3300037312 Ga0395899_0000004 Ga0395899_0000004_391809_393095 375
123 3300033180 Ga0307510_10006711 Ga0307510_1000671113 376
124 3300009551 Ga0105238_10121396 Ga0105238_101213962 377
125 3300033180 Ga0307510_10172580 Ga0307510_101725802 377
126 3300046506 Ga0495583_0015941 Ga0495583_0015941_30_1262 377
127 3300046524 Ga0495648_0124593 Ga0495648_0124593_51_1271 377
128 3300046665 Ga0495661_0015048 Ga0495661_0015048_3658_4878 377
129 3300049460 Ga0495682_0019469 Ga0495682_0019469_778_2010 377
130 3300053093 Ga0500651_0000008 Ga0500651_0000008_147347_148567 377
131 3300009551 Ga0105238_10007926 Ga0105238_1000792611 378
132 3300025924 Ga0207694_10082400 Ga0207694_100824002 378
133 3300046616 Ga0495668_0025445 Ga0495668_0025445_1980_3215 378
134 iso_pu_bacteria 2522125168 2522549812 378
135 3300003781 Ga0055536_1003644 Ga0055536_10036442 382
136 3300005262 Ga0065165_1000083 Ga0065165_1000083116 382
137 3300005289 Ga0065704_10135131 Ga0065704_101351312 382
138 3300005456 Ga0070678_100181207 Ga0070678_1001812071 382
139 3300013102 Ga0157371_10121729 Ga0157371_101217292 382
140 3300013104 Ga0157370_10060802 Ga0157370_100608023 382
141 3300013104 Ga0157370_10079371 Ga0157370_100793712 382
142 3300013104 Ga0157370_10221219 Ga0157370_102212192 382
143 3300013104 Ga0157370_10240281 Ga0157370_102402811 382
144 3300025292 Ga0209676_1004930 Ga0209676_10049308 382
145 3300026078 Ga0207702_10163613 Ga0207702_101636131 382
146 3300031731 Ga0307405_10002730 Ga0307405_100027302 382
147 3300031911 Ga0307412_10206767 Ga0307412_102067672 382
148 3300046665 Ga0495661_0126495 Ga0495661_0126495_69_1217 382
149 3300049671 Ga0501238_006537 Ga0501238_006537_255_1403 382

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01266

DAO

FAD dependent oxidoreductase

142

427

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
5utu-assembly2.cif.gz_H 2.65 angstrom resolution crystal structure of s-adenosylhomocysteinase from cryptosporidium parvum in complex with sah and nad 0.973 114 145
5utu-assembly1.cif.gz_C 2.65 angstrom resolution crystal structure of s-adenosylhomocysteinase from cryptosporidium parvum in complex with sah and nad 0.9714 114 145
5utu-assembly2.cif.gz_E 2.65 angstrom resolution crystal structure of s-adenosylhomocysteinase from cryptosporidium parvum in complex with sah and nad 0.9711 114 145
3o0h-assembly1.cif.gz_B crystal structure of glutathione reductase from bartonella henselae 0.9675 114 144
8ajj-assembly2.cif.gz_A-3 crystal structure of the disulfide reductase mera from staphylococcus aureus 0.956 114 144
ID Description Score Start End Superfamily
af_A0A0P0V2P7_13_181_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9831 116 145 3.50.50.60
5vg6D02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9689 115 142 3.40.50.720
af_M9NFH8_1768_1873_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9679 114 145 3.40.50.720
af_B7ZXP4_113_239_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9662 115 144 3.40.50.720
af_P9WHH3_154_271_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9571 114 144 3.50.50.60
ID Description Score Start End GO Terms
AF-D5VIE7-F1-model_v4 D-amino-acid oxidase (EC 1.4.3.3) 0.962 46 380 GO:0003884
GO:0005737
GO:0019478
GO:0071949
AF-F0C071-F1-model_v4 deleted 0.9618 49 376
AF-A0A534GT45-F1-model_v4 D-amino-acid oxidase (EC 1.4.3.3) 0.961 46 377 GO:0003884
GO:0005737
GO:0019478
GO:0071949
AF-A0A2T5FXY7-F1-model_v4 D-amino-acid oxidase (EC 1.4.3.3) 0.9586 45 381 GO:0003884
GO:0005737
GO:0019478
GO:0071949
AF-A0A4Q5XW65-F1-model_v4 D-amino-acid oxidase (EC 1.4.3.3) 0.9573 199 382 GO:0003884
GO:0005737
GO:0019478
GO:0071949

Feature Viewer

pLDDT pTM Quality
84.81 0.83 High
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Predicted Structure (AlphaFold2)

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