F206463

General Info

Members Datasets Scaffolds Average Seq Length
149 106 298 313

Family's Representative Sequence

Representative Sequence 3300031727|Ga0316576_10177624|Ga0316576_101776242
Length 335
Sequence MPADPTNYTHRPQGRRGLKKSDMKTLAVVLEEPQRLVLSQLELTPAGEDDVVVDVEWSGISTGTERLLWSGRMPPFPGMGYPLVPGYESVGRIAAAGSRSGGRVGDQVFVPGARCYGEVRGLFGGAAAKIVVPGARTVPVGVELGERAVLLALAATAHHAIVGEQANLPDLIVGHGVLGRLLARLTLALGGAAPTVWETNERRAGGADGYLVVDPASDERRDYRSIYDVSGDSKLLDALIARLAPGGEIVLAGFYSEPLSFAFPPAFMREARLRIAAEWREPDLIAVRDLVGCGRLSLDELITHRQAATAAADAYRTAFEDPACLKMVLDWRACS

Samples

Sample ID Description Type Environment
1 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
2 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
3 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
4 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
5 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
6 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
7 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
8 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
9 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
10 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
11 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
12 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
13 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
14 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
15 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
16 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
17 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
18 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
19 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
20 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
21 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
22 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
31 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
32 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
33 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
36 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
37 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
38 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
39 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
40 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
41 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
42 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
43 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
44 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
45 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
46 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
47 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
48 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
49 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
50 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
51 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
52 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
53 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
54 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
55 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
56 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
57 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
58 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
59 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
60 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
61 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
62 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
63 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
64 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
65 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
66 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
67 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
68 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
69 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
70 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
71 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
72 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
73 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
74 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
75 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
76 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
77 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
78 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
79 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
80 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
81 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
82 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
83 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
84 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
86 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
87 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
88 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
89 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
90 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
92 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
93 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
94 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
95 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
96 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
97 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
98 2512875024
99 2643221653 Rhizobium sp. Root1240 Isolate Unclassified
100 2643221719 Rhizobium sp. Root274 Isolate Unclassified
101 2818991272 Rhizobium sp. SLBN-4 Isolate Unclassified
102 2837678835 Jiella endophytica CBS5Q-3 Isolate Unclassified
103 2861691609 Methylorubrum thiocyanatum DSM 11490 Isolate Rhizosphere
104 2888388044 Bradyrhizobium cosmicum 58S1 Isolate Unclassified
105 2989776772 Rhizobium glycinendophyticum CL12 Isolate Unclassified
106 8005246636 Rhizobium wuzhouense W44 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.28
Metatranscriptomes 2.68
Isolates 6.04

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.72
Nodule 0.67
Rhizoplane 2.01
Rhizosphere 78.52
Stem 0
Stem Tuber 0
Unclassified 0.67

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316576_10177624 3300031727 Bacteria 1606
2 JGI25160J50197_1009797 3300003354 Bacteria 3520
3 JGI25160J50197_1020829 3300003354 Bacteria 1967
4 Ga0070661_100074994 3300005344 Bacteria 2492
5 Ga0070673_100442467 3300005364 Bacteria 1168
6 Ga0070667_100365608 3300005367 Bacteria 1308
7 Ga0070663_100017968 3300005455 Bacteria 4626
8 Ga0068853_100456627 3300005539 Bacteria 1202
9 Ga0070665_100009298 3300005548 Bacteria 9946
10 Ga0068858_100011761 3300005842 Bacteria 8256
11 Ga0068860_100010873 3300005843 Bacteria 8977
12 Ga0068862_100008472 3300005844 Bacteria 8505
13 Ga0081540_1017144 3300005983 Bacteria 4496
14 Ga0075365_10041765 3300006038 Bacteria 2997
15 Ga0075367_10003914 3300006178 Bacteria 7182
16 Ga0105249_10524502 3300009553 Bacteria 1232
17 Ga0163162_10372974 3300013306 Bacteria 1560
18 Ga0157375_10234876 3300013308 Bacteria 1993
19 Ga0157379_10099581 3300014968 Bacteria 2609
20 Ga0213875_10076364 3300021388 Bacteria 1563
21 Ga0209758_1000557 3300025297 Bacteria 58827
22 Ga0207426_1038506 3300025302 Bacteria 1505
23 Ga0207642_10086615 3300025899 Bacteria 1536
24 Ga0207705_10004127 3300025909 Bacteria 11009
25 Ga0207669_10055301 3300025937 Bacteria 2403
26 Ga0207668_10058581 3300025972 Bacteria 2693
27 Ga0207703_10033091 3300026035 Bacteria 4095
28 Ga0207678_10018086 3300026067 Bacteria 6190
29 Ga0207676_10382755 3300026095 Bacteria 1310
30 Ga0207683_10020440 3300026121 Bacteria 5662
31 Ga0209995_1013178 3300027471 Bacteria 1353
32 Ga0209968_1000461 3300027526 Bacteria 6514
33 Ga0209966_1000177 3300027695 Bacteria 26013
34 Ga0268266_10000539 3300028379 Bacteria 52742
35 Ga0268266_10058906 3300028379 Bacteria 3308
36 Ga0268265_10009128 3300028380 Bacteria 6703
37 Ga0265326_10046989 3300028558 Bacteria 1224
38 Ga0265319_1026548 3300028563 Bacteria 2061
39 Ga0265334_10000294 3300028573 Bacteria 27911
40 Ga0265318_10000555 3300028577 Bacteria 26355
41 Ga0265338_10014634 3300028800 Bacteria 8704
42 Ga0265330_10000756 3300031235 Bacteria 20349
43 Ga0265332_10001958 3300031238 Bacteria 10852
44 Ga0265332_10038835 3300031238 Bacteria 2062
45 Ga0265320_10040561 3300031240 Bacteria 2320
46 Ga0265325_10008633 3300031241 Bacteria 6002
47 Ga0265329_10017436 3300031242 Bacteria 2470
48 Ga0265329_10021691 3300031242 Bacteria 2155
49 Ga0265340_10000960 3300031247 Bacteria 16413
50 Ga0265339_10004934 3300031249 Bacteria 8990
51 Ga0265339_10011380 3300031249 Bacteria 5480
52 Ga0265339_10049609 3300031249 Bacteria 2298
53 Ga0265331_10004445 3300031250 Bacteria 8758
54 Ga0265316_10005010 3300031344 Bacteria 13004
55 Ga0265316_10095807 3300031344 Bacteria 2260
56 Ga0307509_10159533 3300031507 Bacteria 2156
57 Ga0265313_10006752 3300031595 Bacteria 8025
58 Ga0316575_10025796 3300031665 Bacteria 2281
59 Ga0316579_10010117 3300031691 Bacteria 3980
60 Ga0265314_10003681 3300031711 Bacteria 14706
61 Ga0265342_10000087 3300031712 Bacteria 100045
62 Ga0265342_10115611 3300031712 Bacteria 1514
63 Ga0316576_10000316 3300031727 Bacteria 21453
64 Ga0316576_10001567 3300031727 Bacteria 12417
65 Ga0316576_10010539 3300031727 Bacteria 6011
66 Ga0316576_10022262 3300031727 Bacteria 4399
67 Ga0316576_10069905 3300031727 Bacteria 2589
68 Ga0316578_10011729 3300031728 Bacteria 4600
69 Ga0316578_10043981 3300031728 Bacteria 2596
70 Ga0316578_10077842 3300031728 Bacteria 1970
71 Ga0316577_10000190 3300031733 Bacteria 20350
72 Ga0316583_10022161 3300032133 Bacteria 2275
73 Ga0316585_10000054 3300032137 Bacteria 18607
74 Ga0316580_10000006 3300032139 Bacteria 32316
75 Ga0316592_1003260 3300033524 Bacteria 2903
76 Ga0316588_1001891 3300033528 Bacteria 3555
77 Ga0316588_1010298 3300033528 Bacteria 1968
78 Ga0316596_1005039 3300033541 Bacteria 2997
79 Ga0316574_0000389 3300035398 Bacteria 17144
80 Ga0316574_0002607 3300035398 Bacteria 9084
81 Ga0316574_0027620 3300035398 Bacteria 3419
82 Ga0373947_0244981 3300035725 Bacteria 1184
83 Ga0316582_0000068 3300036647 Bacteria 26166
84 Ga0316582_0001114 3300036647 Bacteria 11386
85 Ga0316584_0001453 3300036712 Bacteria 14202
86 Ga0316584_0003379 3300036712 Bacteria 10348
87 Ga0316584_0003617 3300036712 Bacteria 10114
88 Ga0316584_0041835 3300036712 Bacteria 3416
89 Ga0316584_0075371 3300036712 Bacteria 2529
90 Ga0316584_0101980 3300036712 Bacteria 2149
91 Ga0316584_0177757 3300036712 Bacteria 1576
92 Ga0316584_0277703 3300036712 Unclassified 1218
93 Ga0316581_0004832 3300037588 Bacteria 3467
94 Ga0436364_0328296 3300037853 Bacteria 143298
95 Ga0436364_0377922 3300037853 Bacteria 2387
96 Ga0436364_1184581 3300037853 Bacteria 1963
97 Ga0400483_241299 3300039062 Bacteria 2670
98 Ga0436365_0968098 3300039437 Bacteria 4445
99 Ga0436365_1159328 3300039437 Bacteria 27033
100 Ga0436360_1364341 3300039438 Bacteria 2672
101 Ga0436362_0381195 3300039453 Bacteria 2863
102 Ga0436362_0529236 3300039453 Bacteria 1441
103 Ga0451577_0003136 3300042876 Bacteria 18631
104 Ga0451577_0007153 3300042876 Bacteria 11006
105 Ga0451577_0012939 3300042876 Bacteria 7831
106 Ga0451577_0108523 3300042876 Bacteria 2481
107 Ga0451577_0287336 3300042876 Bacteria 1490
108 Ga0451577_0312211 3300042876 Bacteria 1425
109 Ga0453684_0121667 3300044712 Bacteria 3149
110 Ga0453684_0241501 3300044712 Bacteria 2079
111 Ga0453684_0245085 3300044712 Bacteria 2061
112 Ga0453684_0324240 3300044712 Bacteria 1743
113 Ga0451576_0001939 3300045051 Bacteria 33033
114 Ga0451576_0010324 3300045051 Bacteria 10723
115 Ga0451576_0310777 3300045051 Bacteria 1649
116 Ga0451576_0385244 3300045051 Bacteria 1470
117 Ga0451576_0395607 3300045051 Bacteria 1449
118 Ga0495629_0318860 3300046459 Bacteria 1063
119 Ga0495650_0011033 3300046471 Bacteria 4987
120 Ga0495684_0297109 3300047471 Bacteria 1161
121 Ga0495686_0017248 3300047472 Bacteria 4868
122 Ga0496102_0162672 3300048905 Bacteria 2100
123 Ga0496106_0214313 3300048909 Bacteria 1535
124 Ga0496109_0081904 3300048912 Bacteria 2974
125 Ga0496126_0065213 3300048929 Bacteria 3260
126 Ga0501047_0040185 3300049581 Bacteria 4524
127 Ga0501070_0002177 3300049586 Bacteria 17230
128 Ga0501074_0069303 3300049590 Bacteria 2536
129 Ga0501080_0006685 3300049742 Bacteria 10379
130 Ga0501280_000622 3300049776 Bacteria 8092
131 Ga0501282_000464 3300049778 Bacteria 4835
132 Ga0501035_0000398 3300049822 Bacteria 49830
133 Ga0501044_0010584 3300049823 Bacteria 10006
134 nmdc:mga06z11_56061_c1 3300050494 Bacteria 2037
135 Ga0500641_0001247 3300053096 Bacteria 9047
136 Ga0500641_0001780 3300053096 Bacteria 7622
137 Ga0500595_000084 3300053119 Bacteria 66292
138 Ga0500614_002078 3300053123 Bacteria 4573
139 Ga0500589_001983 3300053147 Bacteria 6569
140 Ga0500636_0170209 3300053177 Bacteria 1179
141 2512963776 2512875024 Bacteria 7195110
142 2644299532 2643221653 Bacteria 4569637
143 2644657760 2643221719 Bacteria 4568197
144 2819244984 2818991272 Bacteria 4622173
145 2837681542 2837678835 Bacteria 5252418
146 2861693239 2861691609 Bacteria 5628931
147 2888389562 2888388044 Bacteria 7304136
148 2989780642 2989776772 Bacteria 4843317
149 8005250647 8005246636 Bacteria 4933972
150 Ga0316576_10177624
151 JGI25160J50197_1009797
152 JGI25160J50197_1020829
153 Ga0070661_100074994
154 Ga0070673_100442467
155 Ga0070667_100365608
156 Ga0070663_100017968
157 Ga0068853_100456627
158 Ga0070665_100009298
159 Ga0068858_100011761
160 Ga0068860_100010873
161 Ga0068862_100008472
162 Ga0081540_1017144
163 Ga0075365_10041765
164 Ga0075367_10003914
165 Ga0105249_10524502
166 Ga0163162_10372974
167 Ga0157375_10234876
168 Ga0157379_10099581
169 Ga0213875_10076364
170 Ga0209758_1000557
171 Ga0207426_1038506
172 Ga0207642_10086615
173 Ga0207705_10004127
174 Ga0207669_10055301
175 Ga0207668_10058581
176 Ga0207703_10033091
177 Ga0207678_10018086
178 Ga0207676_10382755
179 Ga0207683_10020440
180 Ga0209995_1013178
181 Ga0209968_1000461
182 Ga0209966_1000177
183 Ga0268266_10000539
184 Ga0268266_10058906
185 Ga0268265_10009128
186 Ga0265326_10046989
187 Ga0265319_1026548
188 Ga0265334_10000294
189 Ga0265318_10000555
190 Ga0265338_10014634
191 Ga0265330_10000756
192 Ga0265332_10001958
193 Ga0265332_10038835
194 Ga0265320_10040561
195 Ga0265325_10008633
196 Ga0265329_10017436
197 Ga0265329_10021691
198 Ga0265340_10000960
199 Ga0265339_10004934
200 Ga0265339_10011380
201 Ga0265339_10049609
202 Ga0265331_10004445
203 Ga0265316_10005010
204 Ga0265316_10095807
205 Ga0307509_10159533
206 Ga0265313_10006752
207 Ga0316575_10025796
208 Ga0316579_10010117
209 Ga0265314_10003681
210 Ga0265342_10000087
211 Ga0265342_10115611
212 Ga0316576_10000316
213 Ga0316576_10001567
214 Ga0316576_10010539
215 Ga0316576_10022262
216 Ga0316576_10069905
217 Ga0316578_10011729
218 Ga0316578_10043981
219 Ga0316578_10077842
220 Ga0316577_10000190
221 Ga0316583_10022161
222 Ga0316585_10000054
223 Ga0316580_10000006
224 Ga0316592_1003260
225 Ga0316588_1001891
226 Ga0316588_1010298
227 Ga0316596_1005039
228 Ga0316574_0000389
229 Ga0316574_0002607
230 Ga0316574_0027620
231 Ga0373947_0244981
232 Ga0316582_0000068
233 Ga0316582_0001114
234 Ga0316584_0001453
235 Ga0316584_0003379
236 Ga0316584_0003617
237 Ga0316584_0041835
238 Ga0316584_0075371
239 Ga0316584_0101980
240 Ga0316584_0177757
241 Ga0316584_0277703
242 Ga0316581_0004832
243 Ga0436364_0328296
244 Ga0436364_0377922
245 Ga0436364_1184581
246 Ga0400483_241299
247 Ga0436365_0968098
248 Ga0436365_1159328
249 Ga0436360_1364341
250 Ga0436362_0381195
251 Ga0436362_0529236
252 Ga0451577_0003136
253 Ga0451577_0007153
254 Ga0451577_0012939
255 Ga0451577_0108523
256 Ga0451577_0287336
257 Ga0451577_0312211
258 Ga0453684_0121667
259 Ga0453684_0241501
260 Ga0453684_0245085
261 Ga0453684_0324240
262 Ga0451576_0001939
263 Ga0451576_0010324
264 Ga0451576_0310777
265 Ga0451576_0385244
266 Ga0451576_0395607
267 Ga0495629_0318860
268 Ga0495650_0011033
269 Ga0495684_0297109
270 Ga0495686_0017248
271 Ga0496102_0162672
272 Ga0496106_0214313
273 Ga0496109_0081904
274 Ga0496126_0065213
275 Ga0501047_0040185
276 Ga0501070_0002177
277 Ga0501074_0069303
278 Ga0501080_0006685
279 Ga0501280_000622
280 Ga0501282_000464
281 Ga0501035_0000398
282 Ga0501044_0010584
283 nmdc:mga06z11_56061_c1
284 Ga0500641_0001247
285 Ga0500641_0001780
286 Ga0500595_000084
287 Ga0500614_002078
288 Ga0500589_001983
289 Ga0500636_0170209
290 2512963776
291 2644299532
292 2644657760
293 2819244984
294 2837681542
295 2861693239
296 2888389562
297 2989780642
298 8005250647

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08240

ADH_N

Alcohol dehydrogenase GroES-like domain

47

142

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
5vm2-assembly1.cif.gz_A crystal structure of eck1772, an oxidoreductase/dehydrogenase of unknown specificity involved in membrane biogenesis from escherichia coli 0.8525 1 308
4ilk-assembly1.cif.gz_A crystal structure of short chain alcohol dehydrogenase (rspb) from e. coli cft073 (efi target efi-506413) complexed with cofactor nadh 0.8465 2 309
2dq4-assembly1.cif.gz_A crystal structure of threonine 3-dehydrogenase 0.8449 1 308
1e3j-assembly1.cif.gz_A ketose reductase (sorbitol dehydrogenase) from silverleaf whitefly 0.8448 3 308
8b26-assembly1.cif.gz_B dihydroprecondylocarpine acetate synthase 2 from tabernanthe iboga 0.8431 1 308
ID Description Score Start End Superfamily
af_A0A1D8PLT0_34_426_3.50.50.100 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain; 0.8614 149 176 3.50.50.100
af_P77280_1_347_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.8531 1 308 3.90.180.10
af_P36624_10_352_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8487 8 303 3.40.50.300
af_A0A1D6LL83_1_286_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.8486 128 309 3.90.180.10
af_F1Q713_10_342_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.8475 8 296 3.90.180.10
ID Description Score Start End GO Terms
AF-A0A1Z8RV75-F1-model_v4 Chlorophyll synthesis pathway protein BchC 0.9815 1 313 GO:0036354
AF-A0A348FW66-F1-model_v4 Chlorophyll synthesis pathway protein BchC 0.9803 1 313 GO:0036354
AF-A0A1X6ZRN8-F1-model_v4 Alcohol dehydrogenase-like N-terminal domain-containing protein 0.9801 3 123 GO:0016491
AF-A0A259CED3-F1-model_v4 Chlorophyll synthesis pathway protein BchC 0.9787 1 206 GO:0036354
AF-A0A7S9QDB2-F1-model_v4 Chlorophyll synthesis pathway protein BchC 0.9784 1 313 GO:0036354

Map