F206016

General Info

Members Datasets Scaffolds Average Seq Length
149 121 133 1029

Family's Representative Sequence

Representative Sequence 3300013297|Ga0157378_10001152|Ga0157378_1000115212
Length 1074
Sequence MATINNKTDIFLTQPWLAPAYPAGRLRKLMDEVQQIMNTIVLYKHLFFIAAVLVFSQALHSQKNAGPAPLYMDKGAILYTPDSLGNRIPDFSYCGYKASDHSIPSIDIKMVVPPIKGDATLRIQSALDYVGALPLDENGFRGAVLLQKGTYEIAGQLQINASGVVLRGSGMDKNGTTLIGTGTGRLALMKIIGKNNRQIGNAVKIADGYVPVNAMRFSVADAGSFKTGDKIIIRRPSVAVWIELLGTQTFGGGISALGWKPGDRDLFFDRTITKVDGNKLSIDAPLTTALDTNYGGGTVAAYNWNGRINNAGIENLRCFSVYDKSNTKDEDHRWNAINIENAEDAWVRQINFENFAGSAVSVLETAKRITVEDCKSLHPVSEIGGQRRCTFLTAGQQTLFQRCYAESGYHDFATGYCAPGPNAFVQCESHLPYNFSGTIDSWSCGILFDVVNIDGNALRFGNRGQDGNGAGWCAANSLLWNCSAARIDCYKPPTAQNWAFGSWGQFAGDGYWTESNNTIHPRSIFYGQLATRLHKNIDNQAQILYVPTEASSSPTVEVAAELIRQSVKPRMQLNEWIDSSCRRNPLSTASINVKTVDQIAIKKINKPVLSPIMQIKNGWLVRGNKILSGKRQSVPWWTGGIQGKDLEAALPAITRFVPGRSGKGLTDDLLELTDSMKAKGIIGMEQNYGLWYDRRRDDHERIRRMDGDVWPPFYELPFARSGKETAWDGLSKYDLTKYNLFYWSRLKQYADLADQKGLLLVHQNYFQHNIIEAGAHYVDFPWRSANNINNTGFPEPPPFAGDKRIFMAEQFYDITNPVRRELHKKFIRQCLNNFKDNNGVIQFIGEEFTGPLHFVQFWLQTIKDWEKENGRKQVIGLCVTKDVQDSILNNTDYASTVDLIDIRYWHYQADGVAYAPEGGQNLAPRQHARLLKPKKTSFDQVYRAVKEYRQKYPAKAVVYSGDSYPEFGWAVFMAGGSLPVLPSTIDTSFLSEAIAMKPADETGKYILEGNNGMIVYAGNEKTVELDLAKLKGIYRLKFLSTKDGTATSDSSITGGKKTSVDVPAGTGIIWLLNK

Samples

Sample ID Description Type Environment
1 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
2 2738541278 Niastella sp. CF465 Isolate Unclassified
3 2738541302 Pedobacter sp. CF074 Isolate Unclassified
4 2739367651 Pedobacter sp. OK291 Isolate Unclassified
5 2818991444 Filimonas endophytica 3197 Isolate Unclassified
6 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
7 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
8 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
9 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
10 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
11 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
12 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
13 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
14 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
15 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
16 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
17 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
18 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
19 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
20 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
21 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
22 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
23 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
24 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
25 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
26 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
27 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
28 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
36 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
37 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
38 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
44 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
49 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
50 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
51 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
57 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
58 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
59 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
60 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
75 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
76 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
77 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
78 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
79 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
80 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
81 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
82 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
83 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
86 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
87 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
88 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
89 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
90 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
91 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
92 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
93 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
94 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
95 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
96 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
97 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
98 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
99 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
100 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
101 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
102 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
103 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
104 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
105 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
106 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
107 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
108 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
110 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
111 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
112 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
113 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
114 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
115 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
116 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
117 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
118 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
119 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
120 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
121 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.26
Metatranscriptomes 0
Isolates 10.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.05
Nodule 0
Rhizoplane 0.67
Rhizosphere 79.19
Stem 0
Stem Tuber 0
Unclassified 12.08

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10000029 3300002067 Bacteria 81143
2 rootH1_10028289 3300003316 Bacteria 15240
3 rootH2_10001334 3300003320 Bacteria 238709
4 rootH2_10117674 3300003320 Bacteria 4561
5 rootH1_10007542 3300003323 Bacteria 7546
6 Ga0055536_1000011 3300003781 Bacteria 275969
7 Ga0055530_10001781 3300003791 Bacteria 14978
8 Ga0065712_10068460 3300005290 Bacteria 10482
9 Ga0068869_100013451 3300005334 Bacteria 5444
10 Ga0070666_10000029 3300005335 Bacteria 141568
11 Ga0070659_100000705 3300005366 Bacteria 24305
12 Ga0070685_10001083 3300005466 Bacteria 14560
13 Ga0070698_100001594 3300005471 Bacteria 25216
14 Ga0070698_100003564 3300005471 Bacteria 17106
15 Ga0070699_100035979 3300005518 Unclassified 4282
16 Ga0068856_100029606 3300005614 Bacteria 5349
17 Ga0068852_100010047 3300005616 Bacteria 7045
18 Ga0068859_100000035 3300005617 Bacteria 169846
19 Ga0068859_100004963 3300005617 Bacteria 13514
20 Ga0068864_100015703 3300005618 Bacteria 6298
21 Ga0068861_100010827 3300005719 Bacteria 6339
22 Ga0068851_10014825 3300005834 Bacteria 3707
23 Ga0068863_100001540 3300005841 Bacteria 22749
24 Ga0068858_100001641 3300005842 Bacteria 22831
25 Ga0068860_100050827 3300005843 Bacteria 3945
26 Ga0075428_100006109 3300006844 Bacteria 13399
27 Ga0075429_100007846 3300006880 Bacteria 9272
28 Ga0097620_100000035 3300006931 Bacteria 169846
29 Ga0097620_100004963 3300006931 Bacteria 13514
30 Ga0105240_10000010 3300009093 Bacteria 537830
31 Ga0105247_10005271 3300009101 Bacteria 8159
32 Ga0114129_10068135 3300009147 Unclassified 4962
33 Ga0105237_10001022 3300009545 Bacteria 37640
34 Ga0105237_10001655 3300009545 Bacteria 28910
35 Ga0105237_10003224 3300009545 Bacteria 19548
36 Ga0105249_10006160 3300009553 Bacteria 10407
37 Ga0105239_10000509 3300010375 Bacteria 56261
38 Ga0105239_10011858 3300010375 Bacteria 9725
39 Ga0157373_10000113 3300013100 Bacteria 63950
40 Ga0157371_10003273 3300013102 Bacteria 14843
41 Ga0157370_10049142 3300013104 Bacteria 4038
42 Ga0157369_10000002 3300013105 Bacteria 524510
43 Ga0157369_10000039 3300013105 Bacteria 188947
44 Ga0157378_10001152 3300013297 Bacteria 24031
45 Ga0163162_10000723 3300013306 Bacteria 30644
46 Ga0163162_10007364 3300013306 Bacteria 10698
47 Ga0157372_10000001 3300013307 Bacteria 791349
48 Ga0157372_10016671 3300013307 Bacteria 7886
49 Ga0157375_10003971 3300013308 Bacteria 12829
50 Ga0182006_1000573 3300015261 Bacteria 27170
51 Ga0182006_1001169 3300015261 Bacteria 16546
52 Ga0163161_10000386 3300017792 Bacteria 36966
53 Ga0209026_1000326 3300025250 Bacteria 48276
54 Ga0209676_1000001 3300025292 Bacteria 1852142
55 Ga0209050_1000016 3300025298 Bacteria 729149
56 Ga0207695_10000019 3300025913 Bacteria 732137
57 Ga0207671_10000670 3300025914 Bacteria 44624
58 Ga0207671_10002385 3300025914 Bacteria 20172
59 Ga0207652_10000691 3300025921 Bacteria 32885
60 Ga0207644_10019592 3300025931 Bacteria 4592
61 Ga0207690_10000786 3300025932 Bacteria 20480
62 Ga0207689_10021354 3300025942 Bacteria 5444
63 Ga0207712_10023752 3300025961 Bacteria 4051
64 Ga0207703_10017148 3300026035 Bacteria 5649
65 Ga0207641_10000043 3300026088 Bacteria 186340
66 Ga0207641_10009628 3300026088 Bacteria 7965
67 Ga0207676_10012823 3300026095 Bacteria 6016
68 Ga0207675_100006781 3300026118 Bacteria 10834
69 Ga0207698_10001827 3300026142 Bacteria 12444
70 Ga0268264_10009053 3300028381 Bacteria 8260
71 Ga0307515_10000002 3300028794 Bacteria 1231751
72 Ga0307515_10000036 3300028794 Bacteria 332188
73 Ga0307515_10000311 3300028794 Bacteria 120044
74 Ga0307515_10017223 3300028794 Bacteria 13180
75 Ga0265327_10000245 3300031251 Bacteria 108670
76 Ga0307408_100000207 3300031548 Bacteria 63271
77 Ga0307408_100000271 3300031548 Bacteria 52116
78 Ga0307405_10000019 3300031731 Bacteria 167960
79 Ga0307407_10000019 3300031903 Bacteria 129701
80 Ga0307412_10002510 3300031911 Bacteria 10203
81 Ga0307409_100028508 3300031995 Bacteria 3979
82 Ga0307416_100000043 3300032002 Bacteria 130035
83 Ga0307414_10002629 3300032004 Bacteria 9446
84 Ga0395899_0000001 3300037312 Bacteria 1750322
85 Ga0395899_0000550 3300037312 Bacteria 40383
86 Ga0395900_0000048 3300037418 Bacteria 227760
87 Ga0451577_0000208 3300042876 Bacteria 122820
88 Ga0466969_0000308 3300044656 Bacteria 26976
89 Ga0466972_0000008 3300044658 Bacteria 264518
90 Ga0466966_0015817 3300044684 Bacteria 4985
91 Ga0453684_0000668 3300044712 Bacteria 122805
92 Ga0453684_0008830 3300044712 Bacteria 17871
93 Ga0466957_0001516 3300044842 Bacteria 12200
94 Ga0466959_0000241 3300045049 Bacteria 34027
95 Ga0451576_0000291 3300045051 Bacteria 122805
96 Ga0495650_0000025 3300046471 Bacteria 486001
97 Ga0495585_0000018 3300046492 Bacteria 162473
98 Ga0495606_0000026 3300046507 Bacteria 259118
99 Ga0495610_0000035 3300046512 Bacteria 189683
100 Ga0495610_0000489 3300046512 Bacteria 40454
101 Ga0495616_0000434 3300046513 Bacteria 31938
102 Ga0495648_0000864 3300046524 Bacteria 31952
103 Ga0495609_0001048 3300046538 Bacteria 19395
104 Ga0495633_0000046 3300046558 Bacteria 167647
105 Ga0495668_0000070 3300046616 Bacteria 174051
106 Ga0495668_0002313 3300046616 Bacteria 15944
107 Ga0495625_0000008 3300046660 Bacteria 536165
108 Ga0495625_0000616 3300046660 Bacteria 51665
109 Ga0495625_0003994 3300046660 Bacteria 14131
110 Ga0495625_0007677 3300046660 Bacteria 9343
111 Ga0495649_0000006 3300046694 Bacteria 542188
112 Ga0495687_001995 3300047443 Bacteria 17314
113 Ga0495684_0002590 3300047471 Bacteria 14373
114 Ga0495686_0000097 3300047472 Bacteria 183450
115 Ga0495686_0009728 3300047472 Bacteria 6901
116 Ga0495678_005574 3300049459 Bacteria 6898
117 Ga0501047_0004736 3300049581 Bacteria 12794
118 Ga0501202_000375 3300049652 Bacteria 6190
119 Ga0501243_000012 3300049675 Bacteria 15853
120 Ga0501259_000057 3300049688 Bacteria 15307
121 Ga0501261_000149 3300049690 Bacteria 10036
122 Ga0501225_0000084 3300049705 Bacteria 29650
123 Ga0501225_0001116 3300049705 Bacteria 8406
124 Ga0501245_000034 3300049708 Bacteria 12659
125 nmdc:mga0k408_343_c1 3300050493 Bacteria 25397
126 nmdc:mga0k408_942_c1 3300050493 Bacteria 15952
127 nmdc:mga05p37_36923_c1 3300050507 Bacteria 5993
128 Ga0500578_0002080 3300053086 Bacteria 17789
129 Ga0500583_0000094 3300053092 Bacteria 48535
130 Ga0500583_0001530 3300053092 Bacteria 6669
131 Ga0500616_0003169 3300053153 Bacteria 12823
132 Ga0500622_0000281 3300053156 Bacteria 51900
133 Ga0500611_000073 3300053727 Bacteria 40697

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031995 Ga0307409_100028508 Ga0307409_1000285082 919
2 3300047472 Ga0495686_0009728 Ga0495686_0009728_242_3193 959
3 3300005834 Ga0068851_10014825 Ga0068851_100148252 966
4 3300047471 Ga0495684_0002590 Ga0495684_0002590_7380_10514 970
5 3300005618 Ga0068864_100015703 Ga0068864_1000157032 979
6 3300026095 Ga0207676_10012823 Ga0207676_100128232 979
7 3300028794 Ga0307515_10000002 Ga0307515_10000002132 980
8 3300031251 Ga0265327_10000245 Ga0265327_1000024561 983
9 3300045049 Ga0466959_0000241 Ga0466959_0000241_11179_14277 984
10 3300005471 Ga0070698_100003564 Ga0070698_1000035642 985
11 3300005518 Ga0070699_100035979 Ga0070699_1000359792 985
12 3300005719 Ga0068861_100010827 Ga0068861_1000108273 985
13 3300026118 Ga0207675_100006781 Ga0207675_1000067814 985
14 3300005290 Ga0065712_10068460 Ga0065712_100684604 986
15 3300005466 Ga0070685_10001083 Ga0070685_1000108312 986
16 3300006844 Ga0075428_100006109 Ga0075428_1000061095 986
17 3300006880 Ga0075429_100007846 Ga0075429_1000078465 986
18 3300009553 Ga0105249_10006160 Ga0105249_100061602 986
19 3300013306 Ga0163162_10007364 Ga0163162_100073642 986
20 3300013308 Ga0157375_10003971 Ga0157375_100039717 986
21 3300025961 Ga0207712_10023752 Ga0207712_100237522 986
22 3300053092 Ga0500583_0001530 Ga0500583_0001530_2871_6044 986
23 3300005471 Ga0070698_100001594 Ga0070698_1000015948 987
24 3300005617 Ga0068859_100004963 Ga0068859_1000049636 987
25 3300006931 Ga0097620_100004963 Ga0097620_1000049636 987
26 3300003320 rootH2_10001334 rootH2_1000133446 992
27 3300046616 Ga0495668_0002313 Ga0495668_0002313_2360_5485 992
28 3300009147 Ga0114129_10068135 Ga0114129_100681352 995
29 3300050507 nmdc:mga05p37_36923_c1 nmdc:mga05p37_36923_c1_768_3863 995
30 3300044656 Ga0466969_0000308 Ga0466969_0000308_19686_22784 998
31 3300044712 Ga0453684_0008830 Ga0453684_0008830_9225_12230 998
32 3300053153 Ga0500616_0003169 Ga0500616_0003169_8282_11434 1000
33 3300053092 Ga0500583_0000094 Ga0500583_0000094_3332_6490 1002
34 3300049690 Ga0501261_000149 Ga0501261_000149_2584_5718 1003
35 3300028794 Ga0307515_10017223 Ga0307515_100172234 1005
36 3300046512 Ga0495610_0000489 Ga0495610_0000489_8322_11432 1006
37 3300049581 Ga0501047_0004736 Ga0501047_0004736_4509_7676 1007
38 3300044658 Ga0466972_0000008 Ga0466972_0000008_162846_166004 1009
39 3300044842 Ga0466957_0001516 Ga0466957_0001516_7020_10181 1009
40 3300049705 Ga0501225_0001116 Ga0501225_0001116_103_3261 1011
41 3300049652 Ga0501202_000375 Ga0501202_000375_2937_6098 1012
42 3300049675 Ga0501243_000012 Ga0501243_000012_8498_11659 1012
43 3300049688 Ga0501259_000057 Ga0501259_000057_8818_11979 1012
44 3300049708 Ga0501245_000034 Ga0501245_000034_8455_11616 1012
45 3300010375 Ga0105239_10011858 Ga0105239_100118584 1013
46 3300053727 Ga0500611_000073 Ga0500611_000073_4522_7623 1013
47 3300013100 Ga0157373_10000113 Ga0157373_1000011331 1017
48 3300013307 Ga0157372_10016671 Ga0157372_100166714 1017
49 3300050493 nmdc:mga0k408_942_c1 nmdc:mga0k408_942_c1_11470_14583 1017
50 3300037418 Ga0395900_0000048 Ga0395900_0000048_142169_145321 1018
51 3300046513 Ga0495616_0000434 Ga0495616_0000434_15121_18213 1019
52 3300046660 Ga0495625_0000008 Ga0495625_0000008_88282_91374 1019
53 3300046694 Ga0495649_0000006 Ga0495649_0000006_313782_316874 1019
54 iso_pu_bacteria 2929154850 2929155973 1019
55 3300046471 Ga0495650_0000025 Ga0495650_0000025_212627_215773 1020
56 3300005843 Ga0068860_100050827 Ga0068860_1000508272 1021
57 3300028381 Ga0268264_10009053 Ga0268264_100090534 1021
58 3300046538 Ga0495609_0001048 Ga0495609_0001048_15209_18355 1021
59 iso_pu_bacteria 2896317667 2896319142 1021
60 3300049705 Ga0501225_0000084 Ga0501225_0000084_18502_21696 1022
61 3300053086 Ga0500578_0002080 Ga0500578_0002080_5341_8457 1023
62 3300005334 Ga0068869_100013451 Ga0068869_1000134514 1024
63 3300005335 Ga0070666_10000029 Ga0070666_100000299 1024
64 3300005616 Ga0068852_100010047 Ga0068852_1000100473 1024
65 3300005617 Ga0068859_100000035 Ga0068859_10000003559 1024
66 3300005842 Ga0068858_100001641 Ga0068858_1000016414 1024
67 3300006931 Ga0097620_100000035 Ga0097620_10000003559 1024
68 3300009101 Ga0105247_10005271 Ga0105247_100052713 1024
69 3300009545 Ga0105237_10003224 Ga0105237_100032249 1024
70 3300013306 Ga0163162_10000723 Ga0163162_1000072310 1024
71 3300025931 Ga0207644_10019592 Ga0207644_100195922 1024
72 3300025942 Ga0207689_10021354 Ga0207689_100213543 1024
73 3300026035 Ga0207703_10017148 Ga0207703_100171482 1024
74 3300026088 Ga0207641_10000043 Ga0207641_1000004341 1024
75 3300026142 Ga0207698_10001827 Ga0207698_100018276 1024
76 3300025921 Ga0207652_10000691 Ga0207652_100006915 1025
77 3300046660 Ga0495625_0003994 Ga0495625_0003994_9844_12957 1026
78 iso_pu_bacteria 2928078545 2928083487 1026
79 3300025250 Ga0209026_1000326 Ga0209026_100032615 1027
80 3300046507 Ga0495606_0000026 Ga0495606_0000026_222257_225367 1027
81 3300046616 Ga0495668_0000070 Ga0495668_0000070_125327_128440 1027
82 3300046558 Ga0495633_0000046 Ga0495633_0000046_105580_108693 1028
83 iso_pu_bacteria 2919437846 2919441719 1028
84 iso_pu_bacteria 2928147474 2928151250 1028
85 3300025913 Ga0207695_10000019 Ga0207695_10000019274 1029
86 3300046492 Ga0495585_0000018 Ga0495585_0000018_153928_157110 1029
87 iso_pu_bacteria 2738541278 2738729881 1030
88 iso_pu_bacteria 2852627209 2852628678 1031
89 3300005841 Ga0068863_100001540 Ga0068863_1000015403 1032
90 3300026088 Ga0207641_10009628 Ga0207641_100096283 1032
91 3300013297 Ga0157378_10001152 Ga0157378_1000115212 1033
92 3300042876 Ga0451577_0000208 Ga0451577_0000208_61550_64696 1033
93 3300044712 Ga0453684_0000668 Ga0453684_0000668_58125_61271 1033
94 3300045051 Ga0451576_0000291 Ga0451576_0000291_61550_64696 1033
95 3300031548 Ga0307408_100000271 Ga0307408_10000027141 1034
96 3300047443 Ga0495687_001995 Ga0495687_001995_13995_17132 1034
97 3300009545 Ga0105237_10001022 Ga0105237_1000102219 1035
98 3300025914 Ga0207671_10002385 Ga0207671_100023859 1035
99 3300046524 Ga0495648_0000864 Ga0495648_0000864_913_4026 1036
100 3300046660 Ga0495625_0000616 Ga0495625_0000616_24955_28068 1036
101 iso_pu_bacteria 2818991444 2819590569 1036
102 3300003323 rootH1_10007542 rootH1_100075422 1040
103 3300003781 Ga0055536_1000011 Ga0055536_100001128 1041
104 3300003791 Ga0055530_10001781 Ga0055530_100017813 1041
105 3300005366 Ga0070659_100000705 Ga0070659_1000007054 1041
106 3300009093 Ga0105240_10000010 Ga0105240_10000010178 1041
107 3300010375 Ga0105239_10000509 Ga0105239_1000050914 1041
108 3300013104 Ga0157370_10049142 Ga0157370_100491422 1041
109 3300013105 Ga0157369_10000002 Ga0157369_10000002353 1041
110 3300015261 Ga0182006_1000573 Ga0182006_10005733 1041
111 3300015261 Ga0182006_1001169 Ga0182006_10011692 1041
112 3300017792 Ga0163161_10000386 Ga0163161_1000038614 1041
113 3300025292 Ga0209676_1000001 Ga0209676_1000001927 1041
114 3300025298 Ga0209050_1000016 Ga0209050_1000016593 1041
115 3300025932 Ga0207690_10000786 Ga0207690_100007866 1041
116 3300028794 Ga0307515_10000036 Ga0307515_10000036117 1041
117 3300031548 Ga0307408_100000207 Ga0307408_10000020752 1041
118 3300031731 Ga0307405_10000019 Ga0307405_1000001984 1041
119 3300031903 Ga0307407_10000019 Ga0307407_1000001911 1041
120 3300031911 Ga0307412_10002510 Ga0307412_100025101 1041
121 3300032002 Ga0307416_100000043 Ga0307416_10000004378 1041
122 3300032004 Ga0307414_10002629 Ga0307414_100026292 1041
123 3300046512 Ga0495610_0000035 Ga0495610_0000035_116524_119685 1041
124 3300046660 Ga0495625_0007677 Ga0495625_0007677_4213_7371 1041
125 iso_pu_bacteria 2738541302 2738853331 1041
126 iso_pu_bacteria 2739367651 2739588714 1041
127 iso_pu_bacteria 2842722452 2842726114 1041
128 iso_pu_bacteria 2842909656 2842910387 1041
129 iso_pu_bacteria 2945997725 2946000725 1041
130 iso_pu_bacteria 2954016120 2954017610 1041
131 3300047472 Ga0495686_0000097 Ga0495686_0000097_126334_129495 1044
132 3300013102 Ga0157371_10003273 Ga0157371_100032737 1046
133 3300013105 Ga0157369_10000039 Ga0157369_1000003983 1046
134 3300013307 Ga0157372_10000001 Ga0157372_10000001281 1046
135 3300037312 Ga0395899_0000550 Ga0395899_0000550_3725_6880 1046
136 3300044684 Ga0466966_0015817 Ga0466966_0015817_344_3499 1046
137 3300003320 rootH2_10117674 rootH2_101176742 1047
138 3300028794 Ga0307515_10000311 Ga0307515_1000031155 1047
139 iso_pu_bacteria 2599185184 2599480237 1047
140 iso_pu_bacteria 2932082852 2932084548 1047
141 3300009545 Ga0105237_10001655 Ga0105237_1000165512 1048
142 3300025914 Ga0207671_10000670 Ga0207671_100006706 1048
143 3300053156 Ga0500622_0000281 Ga0500622_0000281_23269_26427 1048
144 3300037312 Ga0395899_0000001 Ga0395899_0000001_1362212_1365367 1049
145 3300049459 Ga0495678_005574 Ga0495678_005574_112_3270 1049
146 3300002067 JGI24735J21928_10000029 JGI24735J21928_1000002942 1051
147 3300003316 rootH1_10028289 rootH1_100282896 1051
148 3300005614 Ga0068856_100029606 Ga0068856_1000296062 1051
149 3300050493 nmdc:mga0k408_343_c1 nmdc:mga0k408_343_c1_10207_13374 1051

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF19815

DUF6298

Family of unknown function (DUF6298)

510

996

1

Structural Annotation

Top 5 Hits

ID Description Score Start End
4qm1-assembly1.cif.gz_C crystal structure of the inosine 5'-monophosphate dehydrogenase with an internal deletion of the cbs domain from bacillus anthracis str. ames complexed with inhibitor d67 0.6593 800 949
5uwx-assembly1.cif.gz_C crystal structure of inosine 5'-monophosphate dehydrogenase from clostridium perfringens complexed with imp and p176 0.652 801 950
5urq-assembly1.cif.gz_B crystal structure of the catalytic domain of the inosine monophosphate dehydrogenase from campylobacter jejuni in the complex with inhibitor p176 0.6318 800 950
4z0g-assembly1.cif.gz_A structure of the impdh from ashbya gossypii bound to gmp 0.6283 800 950
5uqg-assembly1.cif.gz_D crystal structure of the catalytic domain of the inosine monophosphate dehydrogenase from campylobacter jejuni in the complex with inhibitor p200 0.6174 801 950
ID Description Score Start End Superfamily
af_Q75JX0_16_300_3.20.140.10 Alpha Beta;Alpha-Beta Barrel;nicotinate phosphoribosyltransferase;nicotinate phosphoribosyltransferase 0.6091 832 953 3.20.140.10
4qq3A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.6048 794 950 3.20.20.70
af_A0A1D6QE16_31_443_3.20.20.80 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycosidases 0.5907 578 866 3.20.20.80
af_A0A0P0XPW4_10_150_2.160.20.10 Mainly Beta;3 Solenoid;Pectate Lyase C-like;Single-stranded right-handed beta-helix, Pectin lyase-like 0.575 80 168 2.160.20.10
af_A0A1D6LSL8_83_290_2.160.20.10 Mainly Beta;3 Solenoid;Pectate Lyase C-like;Single-stranded right-handed beta-helix, Pectin lyase-like 0.5659 82 346 2.160.20.10
ID Description Score Start End GO Terms
AF-A0A4Q5Z5M8-F1-model_v4 Pectate lyase 0.9803 32 365 GO:0016829
AF-A0A519UED9-F1-model_v4 Pectate lyase 0.9742 103 401 GO:0016829
AF-A0A7V2MD30-F1-model_v4 Pectate lyase 0.9655 30 398 GO:0016829
AF-A0A2V6F2U3-F1-model_v4 Uncharacterized protein 0.9653 31 353
AF-W4UR52-F1-model_v4 Pectate lyase 0.9576 30 319 GO:0004557

Feature Viewer

pLDDT pTM Quality
83.33 0.84 High
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Predicted Structure (AlphaFold2)

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