F204033

General Info

Members Datasets Scaffolds Average Seq Length
148 120 296 643

Family's Representative Sequence

Representative Sequence 3300045976|Ga0466967_0080864|Ga0466967_0080864_751_2823
Length 690
Sequence VRSVLVANRGEIARRVFRTCRDLGIATVAVFSDPDAGAPHVAEADAAVRLPGSSPADTYLREELLVEAAKRAGADAIHPGYGFLSENGAFARAVIGGGLTWIGPPPDAIDARGSKIEAKRMMAAAGVPVLDELDPQHITQSDLPVLVKASAGGGGRGMRVVRELAALADEVAAARAEAQSAFGDPTVFCEPYLATGRHIEVQILADGFGTVWAVGERECSIQRRHQKVVEEAPSPLVERLPGMRIPLFDAARAAAKAIGYTGAGTVEFLADEDGRFFFLEMNTRLQVEHPVTECTTGLDLVALQLQVAAGGRLDAEPPAPRGHSIEVRLYAEDPAAGWQPQSGTVRRIRVPGVRSRFAVGTGPHGVRLDSGVEDGSVVGIHYDPMLAKVITWAERRDDAAQLLATTLAHTEIHGLRTNRDLLVNVLRHPAFLAGETDTAFFDRHGLDVLATPLADERTERLSALAAALALDASAPRLLTGVPSGWRNVASQPQRVSFDGPAARHDIEFRFTRDGLSTDVEDGIALVSATADEVVLDTADVRRSFRVARYGADVHVDSPLGAVQLRVVERFPDPADHVAPGSLLAPMPGSVVRLAVQAGDAVRAGQPILWLEAMKMQHQINAPADGVVAELPVREGQQVDVGTVLAVLSEGEDRCTSSSPTSSRRCARPSPIWASGTGTSTRHRAPARANL

Samples

Sample ID Description Type Environment
1 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
2 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
3 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
4 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
5 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
6 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
7 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
8 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
9 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
10 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
13 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
14 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
15 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
16 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
17 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
18 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
19 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
20 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
22 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
23 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
24 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
25 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
26 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
27 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
28 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
45 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
46 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
47 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
48 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
49 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
50 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
51 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
52 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
53 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
54 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
55 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
56 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
57 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
58 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
59 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
60 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
61 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
62 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
63 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
64 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
65 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
66 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
67 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
68 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
69 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
70 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
71 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
72 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
73 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
74 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
75 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
76 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
77 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
78 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
79 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
83 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
84 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
85 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
86 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
87 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
88 2547132424 Nocardia nova SH22a Isolate Unclassified
89 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
90 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
91 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
92 2643221692 Nocardia sp. Root136 Isolate Unclassified
93 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
94 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
95 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
96 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
97 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
98 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
99 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
100 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
101 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
102 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
103 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
104 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
105 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
106 2902792274 Mycolicibacterium sp. P9-64 Isolate Unclassified
107 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
108 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
109 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
110 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
111 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
112 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
113 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
114 2922554459 Rhodococcus sp. 66b Isolate Unclassified
115 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
116 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
117 2956939328 Lolliginicoccus suaedae LNNU 331112 Isolate Rhizosphere
118 2974315732 Rhodococcus sp. SORGH_AS 301 Isolate Unclassified
119 2984523437 Rhodococcus sp. SORGH_AS303 Isolate Aerial Root
120 3001119090 Lolliginicoccus lacisalsi G463 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 77.7
Metatranscriptomes 0
Isolates 22.3

Biome Distribution

Category Percentage (%)
Aerial Root 0.68
Bulb 0
Endosphere 3.38
Nodule 0
Rhizoplane 2.7
Rhizosphere 70.27
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466967_0080864 3300045976 Bacteria 2934
2 Ga0055540_1005021 3300003792 Bacteria 5746
3 Ga0070714_100099702 3300005435 Bacteria 2557
4 Ga0070708_100056880 3300005445 Bacteria 3480
5 Ga0070663_100032504 3300005455 Bacteria 3597
6 Ga0070706_100000389 3300005467 Bacteria 52751
7 Ga0070698_100002212 3300005471 Bacteria 21535
8 Ga0070665_100017955 3300005548 Bacteria 7103
9 Ga0068855_100005147 3300005563 Bacteria 15948
10 Ga0068854_100010802 3300005578 Bacteria 5925
11 Ga0068856_100101920 3300005614 Bacteria 2864
12 Ga0068852_100120395 3300005616 Bacteria 2402
13 Ga0075370_10029820 3300006353 Bacteria 3040
14 Ga0075370_10039647 3300006353 Bacteria 2655
15 Ga0075428_100000138 3300006844 Bacteria 64487
16 Ga0075431_100005843 3300006847 Bacteria 12175
17 Ga0075431_100163209 3300006847 Bacteria 2290
18 Ga0068865_100016974 3300006881 Bacteria 4672
19 Ga0075435_100104002 3300007076 Bacteria 2355
20 Ga0105240_10037714 3300009093 Bacteria 6209
21 Ga0105240_10146542 3300009093 Bacteria 2817
22 Ga0105245_10026851 3300009098 Bacteria 5070
23 Ga0114129_10005574 3300009147 Bacteria 17803
24 Ga0105243_10000721 3300009148 Bacteria 31750
25 Ga0105241_10025732 3300009174 Bacteria 4374
26 Ga0105238_10014251 3300009551 Bacteria 8038
27 Ga0157374_10030603 3300013296 Bacteria 4889
28 Ga0213876_10044405 3300021384 Bacteria 2349
29 Ga0213875_10000443 3300021388 Bacteria 36140
30 Ga0213875_10004207 3300021388 Bacteria 7950
31 Ga0209051_1003529 3300025303 Bacteria 10205
32 Ga0207647_10039456 3300025904 Bacteria 2978
33 Ga0207684_10000461 3300025910 Bacteria 52759
34 Ga0207654_10053912 3300025911 Bacteria 2323
35 Ga0207695_10014583 3300025913 Bacteria 9296
36 Ga0207671_10001186 3300025914 Bacteria 30947
37 Ga0207646_10028028 3300025922 Bacteria 5132
38 Ga0207646_10047596 3300025922 Bacteria 3846
39 Ga0207694_10005070 3300025924 Bacteria 10185
40 Ga0207687_10015059 3300025927 Bacteria 5065
41 Ga0207664_10019446 3300025929 Bacteria 5020
42 Ga0207709_10008773 3300025935 Bacteria 5576
43 Ga0207665_10037104 3300025939 Bacteria 3243
44 Ga0207667_10047773 3300025949 Bacteria 4528
45 Ga0207640_10037695 3300025981 Bacteria 3044
46 Ga0207677_10040648 3300026023 Bacteria 3068
47 Ga0207683_10118749 3300026121 Bacteria 2372
48 Ga0207698_10100526 3300026142 Bacteria 2396
49 Ga0307515_10022037 3300028794 Bacteria 11252
50 Ga0307515_10029011 3300028794 Bacteria 9377
51 Ga0307515_10037209 3300028794 Bacteria 7835
52 Ga0307512_10007441 3300030522 Bacteria 10867
53 Ga0307512_10009763 3300030522 Bacteria 9218
54 Ga0265340_10000364 3300031247 Bacteria 24149
55 Ga0265327_10002363 3300031251 Bacteria 20105
56 Ga0265327_10024827 3300031251 Bacteria 3509
57 Ga0307513_10006905 3300031456 Bacteria 14777
58 Ga0307516_10075561 3300031730 Bacteria 3223
59 Ga0307415_100040345 3300032126 Bacteria 3092
60 Ga0436364_0438602 3300037853 Bacteria 13999
61 Ga0436364_0936746 3300037853 Bacteria 31021
62 Ga0436365_0084725 3300039437 Bacteria 2209
63 Ga0466969_0010386 3300044656 Bacteria 4937
64 Ga0466966_0010226 3300044684 Bacteria 6224
65 Ga0466966_0063471 3300044684 Bacteria 2327
66 Ga0466966_0070941 3300044684 Bacteria 2183
67 Ga0466961_0003484 3300044693 Bacteria 9808
68 Ga0466961_0039701 3300044693 Bacteria 3017
69 Ga0466961_0046558 3300044693 Bacteria 2773
70 Ga0466963_0004428 3300044694 Bacteria 8162
71 Ga0466963_0010962 3300044694 Bacteria 5510
72 Ga0466963_0041846 3300044694 Bacteria 3006
73 Ga0466971_0006927 3300044719 Bacteria 4929
74 Ga0466970_0035047 3300044765 Bacteria 2659
75 Ga0466970_0041186 3300044765 Bacteria 2454
76 Ga0466957_0002660 3300044842 Bacteria 9649
77 Ga0466960_0000239 3300044901 Bacteria 18988
78 Ga0466959_0002310 3300045049 Bacteria 12162
79 Ga0466959_0002716 3300045049 Bacteria 11371
80 Ga0466959_0010190 3300045049 Bacteria 6710
81 Ga0466958_0001433 3300045836 Bacteria 11303
82 Ga0466958_0015090 3300045836 Bacteria 4421
83 Ga0466958_0021912 3300045836 Bacteria 3737
84 Ga0466967_0004195 3300045976 Bacteria 9658
85 Ga0466967_0018201 3300045976 Bacteria 5605
86 Ga0466967_0028199 3300045976 Bacteria 4684
87 Ga0495606_0003316 3300046507 Bacteria 17184
88 Ga0495652_0001343 3300046529 Bacteria 27403
89 Ga0495645_0036471 3300046543 Bacteria 3584
90 Ga0495645_0039198 3300046543 Bacteria 3456
91 Ga0495668_0000265 3300046616 Bacteria 73791
92 Ga0495668_0000407 3300046616 Bacteria 56229
93 Ga0495683_0000585 3300047323 Bacteria 27495
94 Ga0495626_0000052 3300048091 Bacteria 156421
95 Ga0496102_0000263 3300048905 Bacteria 67095
96 Ga0496108_0003614 3300048911 Bacteria 12383
97 Ga0496109_0001430 3300048912 Bacteria 19793
98 Ga0496113_0111618 3300048916 Bacteria 2129
99 Ga0496120_0013067 3300048923 Bacteria 5614
100 Ga0496123_0013560 3300048926 Bacteria 6824
101 Ga0496125_0034058 3300048928 Bacteria 4495
102 Ga0496126_0005592 3300048929 Bacteria 14295
103 Ga0501031_0003245 3300049568 Bacteria 10454
104 Ga0501033_0083600 3300049570 Bacteria 2340
105 Ga0501038_0001063 3300049574 Bacteria 24793
106 Ga0501047_0005424 3300049581 Bacteria 11996
107 Ga0501048_0001054 3300049582 Bacteria 20657
108 Ga0501070_0010116 3300049586 Bacteria 7984
109 Ga0501044_0006806 3300049823 Bacteria 12598
110 nmdc:mga05p37_144581_c1 3300050507 Bacteria 2912
111 nmdc:mga05p37_254301_c1 3300050507 Bacteria 2106
112 nmdc:mga06r32_128837_c1 3300050510 Bacteria 2500
113 nmdc:mga06r32_9682_c1 3300050510 Bacteria 8706
114 Ga0500562_002934 3300053108 Bacteria 4260
115 Ga0466962_0002533 3300061719 Bacteria 8682
116 2548699450 2547132424 Bacteria 8348532
117 2558910249 2558860112 Bacteria 9931328
118 2566992557 2565956761 Bacteria 6601618
119 2644490584 2643221687 Bacteria 6500351
120 2644514338 2643221692 Bacteria 7282860
121 2738887550 2738541308 Bacteria 7020677
122 2739202720 2738543005 Bacteria 5278128
123 2739236764 2738543011 Bacteria 5731169
124 2739366273 2738543034 Bacteria 6084756
125 2744954489 2744054611 Bacteria 5611514
126 2791911554 2791354901 Bacteria 8322202
127 2795782615 2795385470 Bacteria 8317180
128 2795792083 2795385472 Bacteria 6627535
129 2866552364 2866552031 Bacteria 5824618
130 2866614615 2866612099 Bacteria 7543886
131 2887485194 2887478801 Bacteria 8972725
132 2889305657 2889300758 Bacteria 5690814
133 2899368222 2899359706 Bacteria 10940472
134 2902797636 2902792274 Bacteria 7270173
135 2904541581 2904535858 Bacteria 6308016
136 2904767428 2904765812 Bacteria 5369154
137 2904774774 2904770941 Bacteria 5580202
138 2908813079 2908811453 Bacteria 5478616
139 2919423952 2919420072 Bacteria 5390363
140 2919436596 2919432681 Bacteria 5390474
141 2919715330 2919713450 Bacteria 7431245
142 2922560042 2922554459 Bacteria 6683962
143 2928143062 2928142448 Bacteria 5288925
144 2939743792 2939743619 Bacteria 5762299
145 2956940955 2956939328 Bacteria 3474458
146 2974316141 2974315732 Bacteria 4602776
147 2984524303 2984523437 Bacteria 4508481
148 3001121933 3001119090 Bacteria 3449530
149 Ga0466967_0080864
150 Ga0055540_1005021
151 Ga0070714_100099702
152 Ga0070708_100056880
153 Ga0070663_100032504
154 Ga0070706_100000389
155 Ga0070698_100002212
156 Ga0070665_100017955
157 Ga0068855_100005147
158 Ga0068854_100010802
159 Ga0068856_100101920
160 Ga0068852_100120395
161 Ga0075370_10029820
162 Ga0075370_10039647
163 Ga0075428_100000138
164 Ga0075431_100005843
165 Ga0075431_100163209
166 Ga0068865_100016974
167 Ga0075435_100104002
168 Ga0105240_10037714
169 Ga0105240_10146542
170 Ga0105245_10026851
171 Ga0114129_10005574
172 Ga0105243_10000721
173 Ga0105241_10025732
174 Ga0105238_10014251
175 Ga0157374_10030603
176 Ga0213876_10044405
177 Ga0213875_10000443
178 Ga0213875_10004207
179 Ga0209051_1003529
180 Ga0207647_10039456
181 Ga0207684_10000461
182 Ga0207654_10053912
183 Ga0207695_10014583
184 Ga0207671_10001186
185 Ga0207646_10028028
186 Ga0207646_10047596
187 Ga0207694_10005070
188 Ga0207687_10015059
189 Ga0207664_10019446
190 Ga0207709_10008773
191 Ga0207665_10037104
192 Ga0207667_10047773
193 Ga0207640_10037695
194 Ga0207677_10040648
195 Ga0207683_10118749
196 Ga0207698_10100526
197 Ga0307515_10022037
198 Ga0307515_10029011
199 Ga0307515_10037209
200 Ga0307512_10007441
201 Ga0307512_10009763
202 Ga0265340_10000364
203 Ga0265327_10002363
204 Ga0265327_10024827
205 Ga0307513_10006905
206 Ga0307516_10075561
207 Ga0307415_100040345
208 Ga0436364_0438602
209 Ga0436364_0936746
210 Ga0436365_0084725
211 Ga0466969_0010386
212 Ga0466966_0010226
213 Ga0466966_0063471
214 Ga0466966_0070941
215 Ga0466961_0003484
216 Ga0466961_0039701
217 Ga0466961_0046558
218 Ga0466963_0004428
219 Ga0466963_0010962
220 Ga0466963_0041846
221 Ga0466971_0006927
222 Ga0466970_0035047
223 Ga0466970_0041186
224 Ga0466957_0002660
225 Ga0466960_0000239
226 Ga0466959_0002310
227 Ga0466959_0002716
228 Ga0466959_0010190
229 Ga0466958_0001433
230 Ga0466958_0015090
231 Ga0466958_0021912
232 Ga0466967_0004195
233 Ga0466967_0018201
234 Ga0466967_0028199
235 Ga0495606_0003316
236 Ga0495652_0001343
237 Ga0495645_0036471
238 Ga0495645_0039198
239 Ga0495668_0000265
240 Ga0495668_0000407
241 Ga0495683_0000585
242 Ga0495626_0000052
243 Ga0496102_0000263
244 Ga0496108_0003614
245 Ga0496109_0001430
246 Ga0496113_0111618
247 Ga0496120_0013067
248 Ga0496123_0013560
249 Ga0496125_0034058
250 Ga0496126_0005592
251 Ga0501031_0003245
252 Ga0501033_0083600
253 Ga0501038_0001063
254 Ga0501047_0005424
255 Ga0501048_0001054
256 Ga0501070_0010116
257 Ga0501044_0006806
258 nmdc:mga05p37_144581_c1
259 nmdc:mga05p37_254301_c1
260 nmdc:mga06r32_128837_c1
261 nmdc:mga06r32_9682_c1
262 Ga0500562_002934
263 Ga0466962_0002533
264 2548699450
265 2558910249
266 2566992557
267 2644490584
268 2644514338
269 2738887550
270 2739202720
271 2739236764
272 2739366273
273 2744954489
274 2791911554
275 2795782615
276 2795792083
277 2866552364
278 2866614615
279 2887485194
280 2889305657
281 2899368222
282 2902797636
283 2904541581
284 2904767428
285 2904774774
286 2908813079
287 2919423952
288 2919436596
289 2919715330
290 2922560042
291 2928143062
292 2939743792
293 2956940955
294 2974316141
295 2984524303
296 3001121933

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00289

Biotin_carb_N

Biotin carboxylase, N-terminal domain

1

109

0.98

PF02785

Biotin_carb_C

Biotin carboxylase C-terminal domain

326

443

0.98

PF00364

Biotin_lipoyl

Biotin-requiring enzyme

580

647

0.97

PF13533

Biotin_lipoyl_2

Biotin-lipoyl like

618

651

0.93

PF02786

CPSase_L_D2

Carbamoyl-phosphate synthase L chain, ATP binding domain

112

316

0.92

PF07478

Dala_Dala_lig_C

D-ala D-ala ligase C-terminus

129

285

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
5mlk-assembly1.cif.gz_B biotin dependent carboxylase acca3 dimer from mycobacterium tuberculosis (rv3285) 0.9505 2 420
3g8d-assembly1.cif.gz_A crystal structure of the biotin carboxylase subunit, e296a mutant, of acetyl-coa carboxylase from escherichia coli 0.9457 1 419
3jzf-assembly1.cif.gz_A crystal structure of biotin carboxylase from e. coli in complex with benzimidazoles series 0.9449 1 419
3g8d-assembly1.cif.gz_A crystal structure of the biotin carboxylase subunit, e296a mutant, of acetyl-coa carboxylase from escherichia coli 0.9382 1 419
4qsh-assembly1.cif.gz_A crystal structure of l. monocytogenes pyruvate carboxylase in complex with cyclic-di-amp 0.9307 2 426
ID Description Score Start End Superfamily
af_P71538_1_451_3.30.470.20 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9835 2 423 3.30.470.20
3bg5B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9705 1 97 3.40.50.20
2qf7B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9624 2 128 3.40.50.20
af_A0A2R8PV58_38_157_3.40.50.20 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9619 14 128 3.40.50.20
5h80B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9601 3 127 3.40.50.20
ID Description Score Start End GO Terms
AF-A0A7V8YGA4-F1-model_v4 Biotin carboxylation domain-containing protein 0.9791 1 82 GO:0005524
GO:0016874
AF-A0A6N9Y8D7-F1-model_v4 deleted 0.9702 180 407
AF-A0A2S9FAS3-F1-model_v4 Acetyl/propionyl-CoA carboxylase subunit alpha 0.9621 153 564 GO:0004075
GO:0005524
GO:0046872
AF-A0A6N9Y8D7-F1-model_v4 deleted 0.9615 180 407
AF-A0A2S9FAS3-F1-model_v4 Acetyl/propionyl-CoA carboxylase subunit alpha 0.9598 153 564 GO:0004075
GO:0005524
GO:0046872

Map