F203932

General Info

Members Datasets Scaffolds Average Seq Length
148 103 296 394

Family's Representative Sequence

Representative Sequence 3300042876|Ga0451577_0006806|Ga0451577_0006806_4263_5636
Length 457
Sequence MHFRVTWWTAAQSSLIPSVAPAVPGGNDAHGLEQWQILRSRFNQKRGRKNWRDSGKPRKMRDFEAMNSATFSRSAGPAASAAEAPRPDMAPVARPSRGLLPLLKEVLAHGGPGYLQFAITNLCNARCDFCGFAVDRFDPKLRRSVTLREARDVINICRKNHIGYLLFVGGEPLVHKDLRAMTRYAAEQGIHPMVCTNGSLWTDQNMRELAADGLTSVIMSIDAHDVAAHEANRGLPDVCRKIRRANAVFASLGIQTTASITASKLIQDYDKLPEFLEGLGFRSCTFSYPLTSLASSYLSFSDSGLVSYTRDELSSVFEKIKEMKRKSGFPVVNPRESLSEMQRHLRGEREKFGCLGGHKYFYLDWNLNLYRCHFWEKPMCNIYEFDSSKLIRDGCTRCMIDCYRDPSVLQFVAVNASDAWHDLRKGRIASAARRLLDSRNLTSLKAVWEDRDWIGKV

Samples

Sample ID Description Type Environment
1 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
10 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
11 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
12 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
16 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
17 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
18 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
19 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
20 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
21 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
22 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
23 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
24 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
25 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
26 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
27 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
28 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
29 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
30 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
31 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
32 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
33 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
34 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
48 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
49 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
50 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
51 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
52 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
53 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
54 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
55 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
56 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
57 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
58 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
59 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
60 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
61 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
62 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
63 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
64 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
65 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
66 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
67 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
68 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
69 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
70 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
71 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
72 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
73 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
74 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
75 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
76 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
77 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
78 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
79 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
80 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
81 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
82 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
83 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
84 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
85 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
86 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
87 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
88 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
89 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
90 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
91 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
92 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
93 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
94 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
95 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
96 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
97 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
99 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
100 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
101 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
102 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
103 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.68
Nodule 0
Rhizoplane 2.7
Rhizosphere 95.95
Stem 0
Stem Tuber 0
Unclassified 18.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451577_0006806 3300042876 Bacteria 11329
2 rootH2_10106219 3300003320 Bacteria 3061
3 Ga0070690_100034675 3300005330 Bacteria 3163
4 Ga0070690_100129756 3300005330 Unclassified 1701
5 Ga0070689_100050026 3300005340 Bacteria 3228
6 Ga0070688_100009524 3300005365 Bacteria 5319
7 Ga0070688_100112251 3300005365 Bacteria 1814
8 Ga0070709_10079272 3300005434 Bacteria 2139
9 Ga0070711_100034908 3300005439 Bacteria 3358
10 Ga0070681_10166962 3300005458 Unclassified 2124
11 Ga0070685_10031983 3300005466 Bacteria 2944
12 Ga0070685_10036370 3300005466 Unclassified 2783
13 Ga0070698_100322411 3300005471 Bacteria 1476
14 Ga0070686_100000417 3300005544 Bacteria 26842
15 Ga0070704_100044220 3300005549 Bacteria 3093
16 Ga0068855_100002333 3300005563 Bacteria 23429
17 Ga0068855_100148884 3300005563 Unclassified 2662
18 Ga0068857_100023181 3300005577 Bacteria 5462
19 Ga0068864_100077390 3300005618 Unclassified 2909
20 Ga0068861_100039736 3300005719 Bacteria 3514
21 Ga0068863_100390177 3300005841 Bacteria 1360
22 Ga0068862_100130817 3300005844 Bacteria 2219
23 Ga0075429_100328188 3300006880 Unclassified 1339
24 Ga0105240_10031785 3300009093 Bacteria 6839
25 Ga0111539_10009099 3300009094 Bacteria 12572
26 Ga0105245_10125224 3300009098 Bacteria 2405
27 Ga0105247_10091227 3300009101 Bacteria 1934
28 Ga0105238_10060648 3300009551 Unclassified 3787
29 Ga0105238_10251251 3300009551 Unclassified 1747
30 Ga0105249_10019108 3300009553 Bacteria 6112
31 Ga0105239_10114477 3300010375 Bacteria 2991
32 Ga0157370_10051176 3300013104 Unclassified 3946
33 Ga0157378_10134687 3300013297 Bacteria 2290
34 Ga0157375_10000348 3300013308 Bacteria 41856
35 Ga0157375_10034291 3300013308 Bacteria 4834
36 Ga0163163_10000052 3300014325 Bacteria 127851
37 Ga0163163_10028531 3300014325 Bacteria 5361
38 Ga0163163_10267025 3300014325 Unclassified 1762
39 Ga0157380_10156594 3300014326 Bacteria 1975
40 Ga0157376_10047755 3300014969 Bacteria 3536
41 Ga0163161_10154944 3300017792 Bacteria 1744
42 Ga0207695_10005918 3300025913 Bacteria 16028
43 Ga0207663_10001402 3300025916 Bacteria 11165
44 Ga0207694_10169749 3300025924 Unclassified 1766
45 Ga0207664_10164238 3300025929 Bacteria 1896
46 Ga0207670_10196028 3300025936 Unclassified 1531
47 Ga0207667_10004413 3300025949 Bacteria 17218
48 Ga0207667_10421815 3300025949 Bacteria 1357
49 Ga0207712_10071098 3300025961 Bacteria 2502
50 Ga0207678_10074467 3300026067 Bacteria 2909
51 Ga0207708_10203660 3300026075 Unclassified 1579
52 Ga0207702_10059432 3300026078 Bacteria 3256
53 Ga0207676_10021792 3300026095 Unclassified 4705
54 Ga0207674_10012827 3300026116 Bacteria 9353
55 Ga0207674_10046567 3300026116 Bacteria 4452
56 Ga0207683_10104006 3300026121 Bacteria 2537
57 Ga0265337_1000226 3300028556 Bacteria 30178
58 Ga0265337_1013461 3300028556 Bacteria 2744
59 Ga0265318_10050791 3300028577 Bacteria 1558
60 Ga0265323_10049734 3300028653 Bacteria 1491
61 Ga0265338_10001734 3300028800 Bacteria 34498
62 Ga0265338_10002454 3300028800 Bacteria 27760
63 Ga0265338_10002915 3300028800 Bacteria 24849
64 Ga0265338_10003657 3300028800 Bacteria 21412
65 Ga0265338_10010506 3300028800 Bacteria 10840
66 Ga0265338_10013291 3300028800 Bacteria 9308
67 Ga0265338_10024286 3300028800 Bacteria 6197
68 Ga0265338_10024374 3300028800 Bacteria 6181
69 Ga0265338_10032139 3300028800 Bacteria 5127
70 Ga0265338_10032991 3300028800 Bacteria 5037
71 Ga0265338_10049427 3300028800 Bacteria 3812
72 Ga0265338_10051561 3300028800 Bacteria 3702
73 Ga0265338_10123691 3300028800 Unclassified 2057
74 Ga0265338_10214923 3300028800 Bacteria 1440
75 Ga0265324_10057066 3300029957 Bacteria 1337
76 Ga0265320_10004824 3300031240 Bacteria 8764
77 Ga0265325_10041563 3300031241 Bacteria 2408
78 Ga0265329_10004144 3300031242 Bacteria 6119
79 Ga0265340_10000162 3300031247 Bacteria 33635
80 Ga0265339_10002645 3300031249 Bacteria 12772
81 Ga0265327_10003776 3300031251 Bacteria 14052
82 Ga0265316_10014094 3300031344 Bacteria 7055
83 Ga0265316_10167627 3300031344 Bacteria 1640
84 Ga0265313_10001405 3300031595 Bacteria 22549
85 Ga0265313_10023301 3300031595 Bacteria 3337
86 Ga0265314_10000031 3300031711 Bacteria 265924
87 Ga0265314_10024743 3300031711 Bacteria 4545
88 Ga0265314_10059705 3300031711 Bacteria 2608
89 Ga0373931_0055780 3300035691 Bacteria 2116
90 Ga0373935_0007108 3300035692 Bacteria 6684
91 Ga0373927_0012816 3300035695 Bacteria 5576
92 Ga0373947_0007686 3300035725 Bacteria 6228
93 Ga0373937_0281425 3300036401 Bacteria 1571
94 Ga0373925_0005746 3300037068 Bacteria 9219
95 Ga0453684_0000755 3300044712 Bacteria 112346
96 Ga0453684_0073620 3300044712 Bacteria 4305
97 Ga0451576_0090922 3300045051 Bacteria 3175
98 Ga0495592_0000243 3300046454 Bacteria 46498
99 Ga0495641_0013354 3300046461 Unclassified 4521
100 Ga0495651_0003808 3300046462 Bacteria 11540
101 Ga0495651_0068190 3300046462 Unclassified 2712
102 Ga0495580_0221609 3300046472 Bacteria 1300
103 Ga0495582_0009698 3300046473 Bacteria 5305
104 Ga0495662_0013537 3300046476 Bacteria 3971
105 Ga0495664_0048126 3300046477 Bacteria 2531
106 Ga0495628_0000588 3300046516 Bacteria 33447
107 Ga0495628_0005400 3300046516 Bacteria 11202
108 Ga0495628_0070644 3300046516 Bacteria 2722
109 Ga0495630_0000131 3300046517 Bacteria 59509
110 Ga0495630_0009117 3300046517 Bacteria 7135
111 Ga0495630_0009780 3300046517 Bacteria 6902
112 Ga0495630_0065832 3300046517 Unclassified 2723
113 Ga0495666_0005581 3300046526 Bacteria 6339
114 Ga0495666_0050377 3300046526 Bacteria 2002
115 Ga0495652_0160502 3300046529 Bacteria 1746
116 Ga0495640_0042642 3300046533 Unclassified 3164
117 Ga0495640_0087238 3300046533 Bacteria 2064
118 Ga0495586_0000031 3300046535 Bacteria 96104
119 Ga0495586_0000249 3300046535 Bacteria 35735
120 Ga0495586_0003982 3300046535 Bacteria 7920
121 Ga0495645_0031107 3300046543 Bacteria 3888
122 Ga0495634_0019224 3300046642 Bacteria 4856
123 Ga0495634_0097346 3300046642 Unclassified 1905
124 Ga0495634_0171239 3300046642 Bacteria 1364
125 Ga0495599_0012800 3300046678 Bacteria 5177
126 Ga0495658_0006338 3300046683 Bacteria 5812
127 Ga0495613_0050787 3300046689 Unclassified 3058
128 Ga0495624_0061018 3300046690 Bacteria 2363
129 Ga0495581_0078910 3300047315 Unclassified 1905
130 Ga0495604_0045776 3300047317 Unclassified 3413
131 Ga0495674_0000706 3300047319 Bacteria 31568
132 Ga0495674_0013425 3300047319 Bacteria 7703
133 Ga0495674_0021589 3300047319 Bacteria 5953
134 Ga0495674_0021653 3300047319 Bacteria 5943
135 Ga0495676_0185247 3300047321 Bacteria 1456
136 Ga0495680_0008259 3300047322 Bacteria 9482
137 Ga0496102_0150022 3300048905 Bacteria 2190
138 Ga0496107_0085395 3300048910 Bacteria 2303
139 Ga0496114_0026060 3300048917 Unclassified 4784
140 Ga0496115_0015110 3300048918 Bacteria 5851
141 Ga0501033_0251711 3300049570 Unclassified 1252
142 Ga0501034_0206422 3300049571 Bacteria 1921
143 nmdc:mga09592_60414_c1 3300050508 Unclassified 3204
144 nmdc:mga0qj67_67454_c1 3300050509 Unclassified 2850
145 nmdc:mga06r32_28216_c1 3300050510 Bacteria 5249
146 nmdc:mga08y16_457375_c1 3300050511 Bacteria 1301
147 nmdc:mga08y16_8911_c1 3300050511 Bacteria 10534
148 Ga0500650_0000302 3300053098 Bacteria 11888
149 Ga0451577_0006806
150 rootH2_10106219
151 Ga0070690_100034675
152 Ga0070690_100129756
153 Ga0070689_100050026
154 Ga0070688_100009524
155 Ga0070688_100112251
156 Ga0070709_10079272
157 Ga0070711_100034908
158 Ga0070681_10166962
159 Ga0070685_10031983
160 Ga0070685_10036370
161 Ga0070698_100322411
162 Ga0070686_100000417
163 Ga0070704_100044220
164 Ga0068855_100002333
165 Ga0068855_100148884
166 Ga0068857_100023181
167 Ga0068864_100077390
168 Ga0068861_100039736
169 Ga0068863_100390177
170 Ga0068862_100130817
171 Ga0075429_100328188
172 Ga0105240_10031785
173 Ga0111539_10009099
174 Ga0105245_10125224
175 Ga0105247_10091227
176 Ga0105238_10060648
177 Ga0105238_10251251
178 Ga0105249_10019108
179 Ga0105239_10114477
180 Ga0157370_10051176
181 Ga0157378_10134687
182 Ga0157375_10000348
183 Ga0157375_10034291
184 Ga0163163_10000052
185 Ga0163163_10028531
186 Ga0163163_10267025
187 Ga0157380_10156594
188 Ga0157376_10047755
189 Ga0163161_10154944
190 Ga0207695_10005918
191 Ga0207663_10001402
192 Ga0207694_10169749
193 Ga0207664_10164238
194 Ga0207670_10196028
195 Ga0207667_10004413
196 Ga0207667_10421815
197 Ga0207712_10071098
198 Ga0207678_10074467
199 Ga0207708_10203660
200 Ga0207702_10059432
201 Ga0207676_10021792
202 Ga0207674_10012827
203 Ga0207674_10046567
204 Ga0207683_10104006
205 Ga0265337_1000226
206 Ga0265337_1013461
207 Ga0265318_10050791
208 Ga0265323_10049734
209 Ga0265338_10001734
210 Ga0265338_10002454
211 Ga0265338_10002915
212 Ga0265338_10003657
213 Ga0265338_10010506
214 Ga0265338_10013291
215 Ga0265338_10024286
216 Ga0265338_10024374
217 Ga0265338_10032139
218 Ga0265338_10032991
219 Ga0265338_10049427
220 Ga0265338_10051561
221 Ga0265338_10123691
222 Ga0265338_10214923
223 Ga0265324_10057066
224 Ga0265320_10004824
225 Ga0265325_10041563
226 Ga0265329_10004144
227 Ga0265340_10000162
228 Ga0265339_10002645
229 Ga0265327_10003776
230 Ga0265316_10014094
231 Ga0265316_10167627
232 Ga0265313_10001405
233 Ga0265313_10023301
234 Ga0265314_10000031
235 Ga0265314_10024743
236 Ga0265314_10059705
237 Ga0373931_0055780
238 Ga0373935_0007108
239 Ga0373927_0012816
240 Ga0373947_0007686
241 Ga0373937_0281425
242 Ga0373925_0005746
243 Ga0453684_0000755
244 Ga0453684_0073620
245 Ga0451576_0090922
246 Ga0495592_0000243
247 Ga0495641_0013354
248 Ga0495651_0003808
249 Ga0495651_0068190
250 Ga0495580_0221609
251 Ga0495582_0009698
252 Ga0495662_0013537
253 Ga0495664_0048126
254 Ga0495628_0000588
255 Ga0495628_0005400
256 Ga0495628_0070644
257 Ga0495630_0000131
258 Ga0495630_0009117
259 Ga0495630_0009780
260 Ga0495630_0065832
261 Ga0495666_0005581
262 Ga0495666_0050377
263 Ga0495652_0160502
264 Ga0495640_0042642
265 Ga0495640_0087238
266 Ga0495586_0000031
267 Ga0495586_0000249
268 Ga0495586_0003982
269 Ga0495645_0031107
270 Ga0495634_0019224
271 Ga0495634_0097346
272 Ga0495634_0171239
273 Ga0495599_0012800
274 Ga0495658_0006338
275 Ga0495613_0050787
276 Ga0495624_0061018
277 Ga0495581_0078910
278 Ga0495604_0045776
279 Ga0495674_0000706
280 Ga0495674_0013425
281 Ga0495674_0021589
282 Ga0495674_0021653
283 Ga0495676_0185247
284 Ga0495680_0008259
285 Ga0496102_0150022
286 Ga0496107_0085395
287 Ga0496114_0026060
288 Ga0496115_0015110
289 Ga0501033_0251711
290 Ga0501034_0206422
291 nmdc:mga09592_60414_c1
292 nmdc:mga0qj67_67454_c1
293 nmdc:mga06r32_28216_c1
294 nmdc:mga08y16_457375_c1
295 nmdc:mga08y16_8911_c1
296 Ga0500650_0000302

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04055

Radical_SAM

Radical SAM superfamily

117

249

0.88

PF13353

Fer4_12

4Fe-4S single cluster domain

109

233

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
5vsm-assembly1.cif.gz_A crystal structure of viperin with bound [4fe-4s] cluster, 5'-deoxyadenosine, and l-methionine 0.7388 49 319
5vsm-assembly2.cif.gz_B crystal structure of viperin with bound [4fe-4s] cluster, 5'-deoxyadenosine, and l-methionine 0.7249 50 319
6b4c-assembly5.cif.gz_E structure of viperin from trichoderma virens 0.715 49 340
5vsm-assembly1.cif.gz_A crystal structure of viperin with bound [4fe-4s] cluster, 5'-deoxyadenosine, and l-methionine 0.7134 49 319
7n7i-assembly3.cif.gz_C x-ray crystal structure of viperin-like enzyme from trichoderma virens 0.7119 47 345
ID Description Score Start End Superfamily
af_Q58234_1_296_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.7391 48 254 3.20.20.70
5mp7C02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.7272 99 155 3.40.50.2020
1dkuA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.7255 99 155 3.40.50.2020
af_Q2G0S2_154_297_3.40.50.2020 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.7252 99 155 3.40.50.2020
af_Q59026_29_239_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.724 52 258 3.20.20.70
ID Description Score Start End GO Terms
AF-X1CS64-F1-model_v4 Radical SAM core domain-containing protein 0.8592 81 223 GO:0003824
GO:0046872
GO:0051536
AF-A0A355TNX2-F1-model_v4 Radical SAM protein 0.8462 32 392 GO:0003824
GO:0046872
GO:0051536
AF-A0A355TNX2-F1-model_v4 Radical SAM protein 0.844 32 392 GO:0003824
GO:0046872
GO:0051536
AF-A0A522A1J7-F1-model_v4 Radical SAM protein 0.8438 37 392 GO:0003824
GO:0046872
GO:0051536
AF-A0A1E3X7H0-F1-model_v4 Fe-S oxidoreductase 0.8413 35 390 GO:0003824
GO:0046872
GO:0051536

Map