F203775

General Info

Members Datasets Scaffolds Average Seq Length
148 21 296 151

Family's Representative Sequence

Representative Sequence 3300036647|Ga0316582_0701381|Ga0316582_0701381_21_512
Length 163
Sequence LEYNPKRKEEYAMLGMLGSPLMGWRHPFAEMERLARQMDWLTGGMISRSELPWFPAKVFPAVNITEDKDTYYVRAELPGIKADEITLEVTGRNLAFSGERKIPSEGDNAKYHRREREAGRFSRVILLPGDVNADSVDAKMVNGLLTVTIAKSEALKPKQITIH

Samples

Sample ID Description Type Environment
1 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
2 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
3 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
4 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
5 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
6 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
7 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
8 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
9 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
10 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
11 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
12 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
13 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
14 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
15 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
16 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
17 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
18 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
19 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
20 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
21 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 50
Metatranscriptomes 47.97
Isolates 2.03

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 96.62
Stem 0
Stem Tuber 0
Unclassified 29.05

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316582_0701381 3300036647 Bacteria 695
2 Ga0316575_10005162 3300031665 Bacteria 4640
3 Ga0316575_10006328 3300031665 Bacteria 4250
4 Ga0316575_10056085 3300031665 Bacteria 1569
5 Ga0316575_10065022 3300031665 Bacteria 1460
6 Ga0316579_10034024 3300031691 Bacteria 2342
7 Ga0316579_10039021 3300031691 Bacteria 2198
8 Ga0316579_10061883 3300031691 Bacteria 1762
9 Ga0316579_10109013 3300031691 Bacteria 1328
10 Ga0316579_10173761 3300031691 Unclassified 1041
11 Ga0316576_10000554 3300031727 Bacteria 17579
12 Ga0316576_10003273 3300031727 Bacteria 9452
13 Ga0316576_10025079 3300031727 Bacteria 4170
14 Ga0316576_10062915 3300031727 Bacteria 2722
15 Ga0316576_10117919 3300031727 Bacteria 1992
16 Ga0316576_10132940 3300031727 Unclassified 1872
17 Ga0316576_10159906 3300031727 Unclassified 1699
18 Ga0316576_10266515 3300031727 Bacteria 1284
19 Ga0316576_10284477 3300031727 Bacteria 1238
20 Ga0316576_10287266 3300031727 Bacteria 1231
21 Ga0316576_10575678 3300031727 Bacteria 823
22 Ga0316576_10889794 3300031727 Bacteria 638
23 Ga0316576_11165286 3300031727 Unclassified 545
24 Ga0316578_10004339 3300031728 Bacteria 6676
25 Ga0316578_10028611 3300031728 Bacteria 3157
26 Ga0316578_10170067 3300031728 Bacteria 1313
27 Ga0316578_10207897 3300031728 Bacteria 1178
28 Ga0316578_10316707 3300031728 Unclassified 931
29 Ga0316578_10318225 3300031728 Bacteria 929
30 Ga0316578_10592184 3300031728 Bacteria 650
31 Ga0316577_10004013 3300031733 Bacteria 7535
32 Ga0316577_10004593 3300031733 Bacteria 7152
33 Ga0316577_10014071 3300031733 Unclassified 4389
34 Ga0316577_10272672 3300031733 Unclassified 957
35 Ga0316577_10306591 3300031733 Bacteria 900
36 Ga0316577_10308727 3300031733 Unclassified 896
37 Ga0316577_10628882 3300031733 Unclassified 610
38 Ga0316583_10036219 3300032133 Bacteria 1750
39 Ga0316583_10044172 3300032133 Bacteria 1575
40 Ga0316583_10051734 3300032133 Bacteria 1445
41 Ga0316583_10052172 3300032133 Bacteria 1439
42 Ga0316583_10054110 3300032133 Bacteria 1411
43 Ga0316583_10066316 3300032133 Bacteria 1263
44 Ga0316583_10095866 3300032133 Bacteria 1034
45 Ga0316585_10017614 3300032137 Bacteria 2161
46 Ga0316585_10019016 3300032137 Bacteria 2090
47 Ga0316585_10118890 3300032137 Unclassified 869
48 Ga0316585_10154937 3300032137 Unclassified 756
49 Ga0316580_10015286 3300032139 Bacteria 2347
50 Ga0316580_10029026 3300032139 Unclassified 1710
51 Ga0316580_10062036 3300032139 Bacteria 1147
52 Ga0316580_10082756 3300032139 Unclassified 981
53 Ga0316580_10129169 3300032139 Unclassified 774
54 Ga0316593_10002979 3300032168 Bacteria 4122
55 Ga0316593_10009169 3300032168 Bacteria 2786
56 Ga0316593_10015320 3300032168 Unclassified 2304
57 Ga0316593_10030458 3300032168 Unclassified 1752
58 Ga0316593_10031115 3300032168 Bacteria 1736
59 Ga0316593_10033345 3300032168 Bacteria 1685
60 Ga0316593_10036528 3300032168 Unclassified 1620
61 Ga0316593_10038865 3300032168 Bacteria 1577
62 Ga0316593_10039134 3300032168 Bacteria 1572
63 Ga0316593_10042826 3300032168 Bacteria 1511
64 Ga0316593_10044190 3300032168 Bacteria 1490
65 Ga0316593_10044825 3300032168 Bacteria 1481
66 Ga0316593_10053013 3300032168 Bacteria 1374
67 Ga0316593_10064979 3300032168 Bacteria 1253
68 Ga0316593_10067153 3300032168 Bacteria 1235
69 Ga0316593_10069641 3300032168 Unclassified 1215
70 Ga0316593_10069858 3300032168 Bacteria 1213
71 Ga0316593_10072652 3300032168 Bacteria 1192
72 Ga0316593_10082326 3300032168 Bacteria 1125
73 Ga0316593_10082346 3300032168 Unclassified 1125
74 Ga0316593_10084707 3300032168 Unclassified 1110
75 Ga0316593_10085310 3300032168 Bacteria 1107
76 Ga0316593_10087003 3300032168 Unclassified 1097
77 Ga0316593_10088912 3300032168 Bacteria 1086
78 Ga0316593_10093464 3300032168 Unclassified 1060
79 Ga0316593_10094833 3300032168 Bacteria 1053
80 Ga0316593_10099208 3300032168 Bacteria 1032
81 Ga0316593_10108424 3300032168 Unclassified 990
82 Ga0316593_10111777 3300032168 Bacteria 976
83 Ga0316593_10112056 3300032168 Bacteria 975
84 Ga0316593_10113628 3300032168 Unclassified 968
85 Ga0316593_10114901 3300032168 Bacteria 963
86 Ga0316593_10119185 3300032168 Bacteria 947
87 Ga0316593_10125656 3300032168 Bacteria 923
88 Ga0316593_10128857 3300032168 Bacteria 912
89 Ga0316593_10147994 3300032168 Unclassified 853
90 Ga0316593_10150368 3300032168 Bacteria 847
91 Ga0316593_10154597 3300032168 Unclassified 836
92 Ga0316593_10234834 3300032168 Bacteria 683
93 Ga0316593_10242075 3300032168 Unclassified 673
94 Ga0316593_10250329 3300032168 Bacteria 663
95 Ga0316593_10253158 3300032168 Unclassified 659
96 Ga0316593_10257852 3300032168 Unclassified 654
97 Ga0316593_10310843 3300032168 Unclassified 598
98 Ga0316593_10345727 3300032168 Bacteria 568
99 Ga0316593_10352514 3300032168 Bacteria 563
100 Ga0316593_10353808 3300032168 Bacteria 562
101 Ga0316593_10367847 3300032168 Unclassified 552
102 Ga0316593_10372235 3300032168 Unclassified 549
103 Ga0316592_1016292 3300033524 Unclassified 1553
104 Ga0316592_1038311 3300033524 Bacteria 1057
105 Ga0316592_1039162 3300033524 Bacteria 1046
106 Ga0316592_1040050 3300033524 Bacteria 1036
107 Ga0316592_1067589 3300033524 Bacteria 806
108 Ga0316592_1085240 3300033524 Unclassified 720
109 Ga0316586_1020878 3300033527 Bacteria 1078
110 Ga0316586_1025139 3300033527 Bacteria 1001
111 Ga0316586_1027822 3300033527 Unclassified 959
112 Ga0316588_1037423 3300033528 Bacteria 1154
113 Ga0316588_1171511 3300033528 Unclassified 561
114 Ga0316587_1016506 3300033529 Bacteria 1232
115 Ga0316587_1065624 3300033529 Unclassified 676
116 Ga0316596_1018683 3300033541 Bacteria 1754
117 Ga0316596_1033157 3300033541 Bacteria 1345
118 Ga0316596_1039522 3300033541 Unclassified 1237
119 Ga0316596_1042309 3300033541 Bacteria 1198
120 Ga0316596_1050458 3300033541 Unclassified 1100
121 Ga0316596_1053094 3300033541 Bacteria 1075
122 Ga0316596_1064151 3300033541 Bacteria 981
123 Ga0316596_1070052 3300033541 Bacteria 939
124 Ga0316596_1137070 3300033541 Unclassified 669
125 Ga0316574_0077512 3300035398 Bacteria 2106
126 Ga0316574_0121770 3300035398 Bacteria 1675
127 Ga0316582_0056708 3300036647 Bacteria 2500
128 Ga0316582_0186926 3300036647 Bacteria 1410
129 Ga0316582_0469016 3300036647 Bacteria 868
130 Ga0316582_0868472 3300036647 Unclassified 617
131 Ga0316584_0007330 3300036712 Bacteria 7533
132 Ga0316584_0008496 3300036712 Bacteria 7075
133 Ga0316584_0038512 3300036712 Bacteria 3557
134 Ga0316584_0038878 3300036712 Bacteria 3540
135 Ga0316584_0055565 3300036712 Bacteria 2964
136 Ga0316584_0142215 3300036712 Bacteria 1789
137 Ga0316584_0186304 3300036712 Bacteria 1535
138 Ga0316584_0188747 3300036712 Bacteria 1524
139 Ga0316584_0234525 3300036712 Bacteria 1344
140 Ga0316584_0261196 3300036712 Bacteria 1263
141 Ga0316584_0343316 3300036712 Unclassified 1073
142 Ga0400486_22841 3300038742 Bacteria 34289
143 Ga0400487_63934 3300039110 Bacteria 30817
144 Ga0453684_0008129 3300044712 Bacteria 18941
145 Ga0453684_0563889 3300044712 Unclassified 1253
146 2740992785 2740891818 Bacteria 6711283
147 2740993209 2740891818 Bacteria 6711283
148 2740994199 2740891818 Bacteria 6711283
149 Ga0316582_0701381
150 Ga0316575_10005162
151 Ga0316575_10006328
152 Ga0316575_10056085
153 Ga0316575_10065022
154 Ga0316579_10034024
155 Ga0316579_10039021
156 Ga0316579_10061883
157 Ga0316579_10109013
158 Ga0316579_10173761
159 Ga0316576_10000554
160 Ga0316576_10003273
161 Ga0316576_10025079
162 Ga0316576_10062915
163 Ga0316576_10117919
164 Ga0316576_10132940
165 Ga0316576_10159906
166 Ga0316576_10266515
167 Ga0316576_10284477
168 Ga0316576_10287266
169 Ga0316576_10575678
170 Ga0316576_10889794
171 Ga0316576_11165286
172 Ga0316578_10004339
173 Ga0316578_10028611
174 Ga0316578_10170067
175 Ga0316578_10207897
176 Ga0316578_10316707
177 Ga0316578_10318225
178 Ga0316578_10592184
179 Ga0316577_10004013
180 Ga0316577_10004593
181 Ga0316577_10014071
182 Ga0316577_10272672
183 Ga0316577_10306591
184 Ga0316577_10308727
185 Ga0316577_10628882
186 Ga0316583_10036219
187 Ga0316583_10044172
188 Ga0316583_10051734
189 Ga0316583_10052172
190 Ga0316583_10054110
191 Ga0316583_10066316
192 Ga0316583_10095866
193 Ga0316585_10017614
194 Ga0316585_10019016
195 Ga0316585_10118890
196 Ga0316585_10154937
197 Ga0316580_10015286
198 Ga0316580_10029026
199 Ga0316580_10062036
200 Ga0316580_10082756
201 Ga0316580_10129169
202 Ga0316593_10002979
203 Ga0316593_10009169
204 Ga0316593_10015320
205 Ga0316593_10030458
206 Ga0316593_10031115
207 Ga0316593_10033345
208 Ga0316593_10036528
209 Ga0316593_10038865
210 Ga0316593_10039134
211 Ga0316593_10042826
212 Ga0316593_10044190
213 Ga0316593_10044825
214 Ga0316593_10053013
215 Ga0316593_10064979
216 Ga0316593_10067153
217 Ga0316593_10069641
218 Ga0316593_10069858
219 Ga0316593_10072652
220 Ga0316593_10082326
221 Ga0316593_10082346
222 Ga0316593_10084707
223 Ga0316593_10085310
224 Ga0316593_10087003
225 Ga0316593_10088912
226 Ga0316593_10093464
227 Ga0316593_10094833
228 Ga0316593_10099208
229 Ga0316593_10108424
230 Ga0316593_10111777
231 Ga0316593_10112056
232 Ga0316593_10113628
233 Ga0316593_10114901
234 Ga0316593_10119185
235 Ga0316593_10125656
236 Ga0316593_10128857
237 Ga0316593_10147994
238 Ga0316593_10150368
239 Ga0316593_10154597
240 Ga0316593_10234834
241 Ga0316593_10242075
242 Ga0316593_10250329
243 Ga0316593_10253158
244 Ga0316593_10257852
245 Ga0316593_10310843
246 Ga0316593_10345727
247 Ga0316593_10352514
248 Ga0316593_10353808
249 Ga0316593_10367847
250 Ga0316593_10372235
251 Ga0316592_1016292
252 Ga0316592_1038311
253 Ga0316592_1039162
254 Ga0316592_1040050
255 Ga0316592_1067589
256 Ga0316592_1085240
257 Ga0316586_1020878
258 Ga0316586_1025139
259 Ga0316586_1027822
260 Ga0316588_1037423
261 Ga0316588_1171511
262 Ga0316587_1016506
263 Ga0316587_1065624
264 Ga0316596_1018683
265 Ga0316596_1033157
266 Ga0316596_1039522
267 Ga0316596_1042309
268 Ga0316596_1050458
269 Ga0316596_1053094
270 Ga0316596_1064151
271 Ga0316596_1070052
272 Ga0316596_1137070
273 Ga0316574_0077512
274 Ga0316574_0121770
275 Ga0316582_0056708
276 Ga0316582_0186926
277 Ga0316582_0469016
278 Ga0316582_0868472
279 Ga0316584_0007330
280 Ga0316584_0008496
281 Ga0316584_0038512
282 Ga0316584_0038878
283 Ga0316584_0055565
284 Ga0316584_0142215
285 Ga0316584_0186304
286 Ga0316584_0188747
287 Ga0316584_0234525
288 Ga0316584_0261196
289 Ga0316584_0343316
290 Ga0400486_22841
291 Ga0400487_63934
292 Ga0453684_0008129
293 Ga0453684_0563889
294 2740992785
295 2740993209
296 2740994199

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17886

ArsA_HSP20

HSP20-like domain found in ArsA

68

149

0.97

PF00011

HSP20

Hsp20/alpha crystallin family

63

163

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
1shs-assembly1.cif.gz_A small heat shock protein from methanococcus jannaschii 0.8833 47 152
2cg9-assembly1.cif.gz_Y crystal structure of an hsp90-sba1 closed chaperone complex 0.8761 49 141
4eld-assembly1.cif.gz_A crystal structure of an activated variant of small heat shock protein hsp16.5 0.8675 47 152
3guf-assembly1.cif.gz_B crystal structure of the hspa from xanthomonas axonopodis 0.8576 49 140
7l7i-assembly1.cif.gz_E cryo-em structure of hsp90:fkbp51:p23 closed-state complex 0.8493 51 142
ID Description Score Start End Superfamily
2cg9Y01 Mainly Beta;Sandwich;Immunoglobulin-like; 0.8761 49 141 2.60.40.790
4eldA00 Mainly Beta;Sandwich;Immunoglobulin-like; 0.8675 47 152 2.60.40.790
3glaB00 Mainly Beta;Sandwich;Immunoglobulin-like; 0.8657 49 142 2.60.40.790
1ejfB00 Mainly Beta;Sandwich;Immunoglobulin-like; 0.8615 51 142 2.60.40.790
af_Q9D9A7_3_126_2.60.40.790 Mainly Beta;Sandwich;Immunoglobulin-like; 0.8614 51 140 2.60.40.790
ID Description Score Start End GO Terms
AF-A0A1V5CCW2-F1-model_v4 Spore protein SP21 0.9084 48 152
AF-A0A0G0EPA2-F1-model_v4 Putative small heat shock protein 0.9015 42 152
AF-A0A1V5CCW2-F1-model_v4 Spore protein SP21 0.8846 48 152
AF-A0A1J5I623-F1-model_v4 SHSP domain-containing protein 0.8803 46 152
AF-A0A1Q7NSV5-F1-model_v4 Uncharacterized protein 0.8753 39 152

Map