F203024

General Info

Members Datasets Scaffolds Average Seq Length
148 89 296 123

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10047058|Ga0114129_100470583
Length 133
Sequence MLKPIPRKLEGVNYMGLTHVPVTVSNLVTHESFTAAFLIDTGATDSMAPASELKRIGIEPVGKRTYELANGSIEEYEFGEARLSFLDETLPTRLIFGPDNVEPILGVFALESAGLVVDPANQTLKRLPALSLK

Samples

Sample ID Description Type Environment
1 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
16 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
22 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
23 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
27 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
32 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
33 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
41 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
42 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
43 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
45 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
46 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
52 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
53 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
76 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
77 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
78 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
79 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
80 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
81 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
82 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
83 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
84 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
85 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
86 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
87 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
88 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
89 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 99.32
Stem 0
Stem Tuber 0
Unclassified 29.05

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0114129_10047058 3300009147 Bacteria 6062
2 rootL2_10297687 3300003322 Bacteria 3260
3 Ga0065715_10136614 3300005293 Archaea 1919
4 Ga0065707_10425496 3300005295 Unclassified 826
5 Ga0065707_10586619 3300005295 Unclassified 698
6 Ga0065707_11054513 3300005295 Unclassified 526
7 Ga0070670_100004068 3300005331 Bacteria 12212
8 Ga0070677_10237986 3300005333 Unclassified 897
9 Ga0070680_100018117 3300005336 Bacteria 5563
10 Ga0068868_100643328 3300005338 Bacteria 943
11 Ga0070689_100169534 3300005340 Unclassified 1768
12 Ga0070669_100004877 3300005353 Bacteria 9681
13 Ga0070671_100003244 3300005355 Bacteria 12683
14 Ga0070674_102063208 3300005356 Bacteria 520
15 Ga0070710_10355916 3300005437 Unclassified 970
16 Ga0070711_100000002 3300005439 Bacteria 263148
17 Ga0070705_100084959 3300005440 Bacteria 1955
18 Ga0070705_100199844 3300005440 Unclassified 1369
19 Ga0070694_100135153 3300005444 Bacteria 1786
20 Ga0070708_100000804 3300005445 Bacteria 23664
21 Ga0070708_100097020 3300005445 Bacteria 2694
22 Ga0070708_100266692 3300005445 Bacteria 1610
23 Ga0070708_100873483 3300005445 Bacteria 845
24 Ga0070678_100259686 3300005456 Bacteria 1460
25 Ga0070662_100010424 3300005457 Bacteria 6096
26 Ga0068867_100456406 3300005459 Bacteria 1090
27 Ga0070706_100000293 3300005467 Bacteria 60783
28 Ga0070706_100013096 3300005467 Bacteria 7674
29 Ga0070706_100093625 3300005467 Bacteria 2788
30 Ga0070706_100218995 3300005467 Bacteria 1777
31 Ga0070706_100355679 3300005467 Bacteria 1365
32 Ga0070706_100428376 3300005467 Bacteria 1231
33 Ga0070707_100000561 3300005468 Bacteria 37306
34 Ga0070707_100065686 3300005468 Bacteria 3486
35 Ga0070698_100000179 3300005471 Bacteria 59634
36 Ga0070698_100042838 3300005471 Bacteria 4643
37 Ga0070698_100086074 3300005471 Bacteria 3129
38 Ga0070698_100571147 3300005471 Bacteria 1071
39 Ga0070699_100006700 3300005518 Bacteria 10017
40 Ga0070699_100229164 3300005518 Viruses 1656
41 Ga0070699_100325432 3300005518 Bacteria 1382
42 Ga0070697_100062988 3300005536 Bacteria 3028
43 Ga0070697_100423637 3300005536 Bacteria 1157
44 Ga0070697_101332602 3300005536 Unclassified 640
45 Ga0070686_100021857 3300005544 Bacteria 3808
46 Ga0070695_101016205 3300005545 Unclassified 675
47 Ga0070695_101524419 3300005545 Unclassified 557
48 Ga0070696_101752191 3300005546 Unclassified 536
49 Ga0070704_100032246 3300005549 Bacteria 3532
50 Ga0070704_101547453 3300005549 Unclassified 611
51 Ga0068854_100159568 3300005578 Bacteria 1745
52 Ga0068859_100098810 3300005617 Bacteria 2973
53 Ga0068859_100295360 3300005617 Bacteria 1713
54 Ga0068859_100937500 3300005617 Unclassified 949
55 Ga0068864_100887728 3300005618 Unclassified 880
56 Ga0068866_10523582 3300005718 Unclassified 788
57 Ga0068861_100064329 3300005719 Bacteria 2822
58 Ga0068861_100073700 3300005719 Bacteria 2653
59 Ga0068863_101360741 3300005841 Unclassified 717
60 Ga0081539_10010649 3300005985 Bacteria 7422
61 Ga0070716_100000003 3300006173 Bacteria 312721
62 Ga0070716_100156942 3300006173 Unclassified 1470
63 Ga0075430_100012289 3300006846 Bacteria 7287
64 Ga0075430_100436659 3300006846 Bacteria 1081
65 Ga0075431_100283764 3300006847 Bacteria 1676
66 Ga0075433_11712838 3300006852 Bacteria 541
67 Ga0075429_100018526 3300006880 Bacteria 6028
68 Ga0075429_100745821 3300006880 Unclassified 858
69 Ga0075436_100000128 3300006914 Bacteria 45083
70 Ga0075436_100078010 3300006914 Bacteria 2294
71 Ga0097620_100098806 3300006931 Bacteria 2973
72 Ga0097620_100295360 3300006931 Bacteria 1713
73 Ga0097620_100937493 3300006931 Unclassified 949
74 Ga0075435_101486290 3300007076 Unclassified 594
75 Ga0099794_10026904 3300007265 Bacteria 2663
76 Ga0099794_10367493 3300007265 Unclassified 749
77 Ga0105240_10575694 3300009093 Bacteria 1243
78 Ga0111539_10003363 3300009094 Bacteria 21110
79 Ga0111539_10528247 3300009094 Bacteria 1375
80 Ga0111539_13143308 3300009094 Unclassified 533
81 Ga0114129_10047580 3300009147 Bacteria 6026
82 Ga0114129_10065144 3300009147 Bacteria 5086
83 Ga0114129_10076528 3300009147 Bacteria 4659
84 Ga0114129_10150692 3300009147 Bacteria 3183
85 Ga0114129_10238872 3300009147 Bacteria 2443
86 Ga0105242_11571830 3300009176 Unclassified 690
87 Ga0105242_13004104 3300009176 Unclassified 522
88 Ga0099796_10097938 3300010159 Bacteria 1099
89 Ga0157378_12234043 3300013297 Unclassified 598
90 Ga0157380_10012494 3300014326 Bacteria 6162
91 Ga0163161_10060537 3300017792 Bacteria 2756
92 Ga0163161_10716112 3300017792 Unclassified 835
93 Ga0207653_10000106 3300025885 Bacteria 59126
94 Ga0207682_10185535 3300025893 Unclassified 951
95 Ga0207688_10349429 3300025901 Bacteria 911
96 Ga0207645_10976141 3300025907 Unclassified 574
97 Ga0207684_10000293 3300025910 Bacteria 71834
98 Ga0207684_10053416 3300025910 Bacteria 3429
99 Ga0207684_10077359 3300025910 Bacteria 2829
100 Ga0207684_10185862 3300025910 Bacteria 1792
101 Ga0207684_10753248 3300025910 Bacteria 825
102 Ga0207663_10000022 3300025916 Bacteria 134855
103 Ga0207660_10324513 3300025917 Bacteria 1230
104 Ga0207646_10000267 3300025922 Bacteria 71176
105 Ga0207646_10176753 3300025922 Unclassified 1928
106 Ga0207646_10310913 3300025922 Bacteria 1424
107 Ga0207681_10002678 3300025923 Bacteria 11275
108 Ga0207650_10006286 3300025925 Bacteria 8094
109 Ga0207650_11200506 3300025925 Unclassified 646
110 Ga0207644_10623540 3300025931 Bacteria 896
111 Ga0207686_10000028 3300025934 Bacteria 163090
112 Ga0207709_10000082 3300025935 Bacteria 163123
113 Ga0207704_10017579 3300025938 Bacteria 3712
114 Ga0207665_10000009 3300025939 Bacteria 162252
115 Ga0207689_10007179 3300025942 Bacteria 9787
116 Ga0207712_10318960 3300025961 Bacteria 1281
117 Ga0207640_10177255 3300025981 Bacteria 1595
118 Ga0207677_10000007 3300026023 Bacteria 274553
119 Ga0207708_11264441 3300026075 Unclassified 646
120 Ga0207676_11658892 3300026095 Unclassified 637
121 Ga0209588_1012403 3300027671 Bacteria 2587
122 Ga0453683_0001507 3300044673 Bacteria 19909
123 Ga0453683_1014236 3300044673 Unclassified 551
124 Ga0451576_1989431 3300045051 Unclassified 599
125 Ga0495584_0369364 3300046491 Unclassified 729
126 Ga0501041_0823959 3300049577 Bacteria 595
127 Ga0501042_1151686 3300049578 Unclassified 565
128 Ga0501075_0428855 3300049591 Unclassified 1008
129 Ga0501075_0478302 3300049591 Unclassified 950
130 Ga0501076_0818969 3300049592 Unclassified 768
131 Ga0501259_162357 3300049688 Unclassified 559
132 nmdc:mga05p37_120284_c2 3300050507 Bacteria 2362
133 nmdc:mga05p37_247_c1 3300050507 Bacteria 55324
134 nmdc:mga05p37_252418_c1 3300050507 Bacteria 2115
135 nmdc:mga05p37_270209_c1 3300050507 Unclassified 2032
136 nmdc:mga05p37_668756_c1 3300050507 Bacteria 1160
137 nmdc:mga05p37_93559_c1 3300050507 Bacteria 3704
138 nmdc:mga09592_125003_c1 3300050508 Bacteria 2211
139 nmdc:mga0qj67_26893_c1 3300050509 Bacteria 4455
140 nmdc:mga0qj67_41172_c1 3300050509 Bacteria 3633
141 nmdc:mga06r32_78987_c1 3300050510 Bacteria 3200
142 nmdc:mga08y16_1358378_c1 3300050511 Unclassified 675
143 nmdc:mga08y16_578704_c1 3300050511 Bacteria 1134
144 nmdc:mga08y16_8473_c1 3300050511 Bacteria 10768
145 nmdc:mga0n895_1569230_c1 3300050512 Unclassified 623
146 nmdc:mga08x19_205261_c1 3300050514 Bacteria 1352
147 nmdc:mga08x19_2_c1 3300050514 Bacteria 741277
148 nmdc:mga08x19_439649_c1 3300050514 Bacteria 917
149 Ga0114129_10047058
150 rootL2_10297687
151 Ga0065715_10136614
152 Ga0065707_10425496
153 Ga0065707_10586619
154 Ga0065707_11054513
155 Ga0070670_100004068
156 Ga0070677_10237986
157 Ga0070680_100018117
158 Ga0068868_100643328
159 Ga0070689_100169534
160 Ga0070669_100004877
161 Ga0070671_100003244
162 Ga0070674_102063208
163 Ga0070710_10355916
164 Ga0070711_100000002
165 Ga0070705_100084959
166 Ga0070705_100199844
167 Ga0070694_100135153
168 Ga0070708_100000804
169 Ga0070708_100097020
170 Ga0070708_100266692
171 Ga0070708_100873483
172 Ga0070678_100259686
173 Ga0070662_100010424
174 Ga0068867_100456406
175 Ga0070706_100000293
176 Ga0070706_100013096
177 Ga0070706_100093625
178 Ga0070706_100218995
179 Ga0070706_100355679
180 Ga0070706_100428376
181 Ga0070707_100000561
182 Ga0070707_100065686
183 Ga0070698_100000179
184 Ga0070698_100042838
185 Ga0070698_100086074
186 Ga0070698_100571147
187 Ga0070699_100006700
188 Ga0070699_100229164
189 Ga0070699_100325432
190 Ga0070697_100062988
191 Ga0070697_100423637
192 Ga0070697_101332602
193 Ga0070686_100021857
194 Ga0070695_101016205
195 Ga0070695_101524419
196 Ga0070696_101752191
197 Ga0070704_100032246
198 Ga0070704_101547453
199 Ga0068854_100159568
200 Ga0068859_100098810
201 Ga0068859_100295360
202 Ga0068859_100937500
203 Ga0068864_100887728
204 Ga0068866_10523582
205 Ga0068861_100064329
206 Ga0068861_100073700
207 Ga0068863_101360741
208 Ga0081539_10010649
209 Ga0070716_100000003
210 Ga0070716_100156942
211 Ga0075430_100012289
212 Ga0075430_100436659
213 Ga0075431_100283764
214 Ga0075433_11712838
215 Ga0075429_100018526
216 Ga0075429_100745821
217 Ga0075436_100000128
218 Ga0075436_100078010
219 Ga0097620_100098806
220 Ga0097620_100295360
221 Ga0097620_100937493
222 Ga0075435_101486290
223 Ga0099794_10026904
224 Ga0099794_10367493
225 Ga0105240_10575694
226 Ga0111539_10003363
227 Ga0111539_10528247
228 Ga0111539_13143308
229 Ga0114129_10047580
230 Ga0114129_10065144
231 Ga0114129_10076528
232 Ga0114129_10150692
233 Ga0114129_10238872
234 Ga0105242_11571830
235 Ga0105242_13004104
236 Ga0099796_10097938
237 Ga0157378_12234043
238 Ga0157380_10012494
239 Ga0163161_10060537
240 Ga0163161_10716112
241 Ga0207653_10000106
242 Ga0207682_10185535
243 Ga0207688_10349429
244 Ga0207645_10976141
245 Ga0207684_10000293
246 Ga0207684_10053416
247 Ga0207684_10077359
248 Ga0207684_10185862
249 Ga0207684_10753248
250 Ga0207663_10000022
251 Ga0207660_10324513
252 Ga0207646_10000267
253 Ga0207646_10176753
254 Ga0207646_10310913
255 Ga0207681_10002678
256 Ga0207650_10006286
257 Ga0207650_11200506
258 Ga0207644_10623540
259 Ga0207686_10000028
260 Ga0207709_10000082
261 Ga0207704_10017579
262 Ga0207665_10000009
263 Ga0207689_10007179
264 Ga0207712_10318960
265 Ga0207640_10177255
266 Ga0207677_10000007
267 Ga0207708_11264441
268 Ga0207676_11658892
269 Ga0209588_1012403
270 Ga0453683_0001507
271 Ga0453683_1014236
272 Ga0451576_1989431
273 Ga0495584_0369364
274 Ga0501041_0823959
275 Ga0501042_1151686
276 Ga0501075_0428855
277 Ga0501075_0478302
278 Ga0501076_0818969
279 Ga0501259_162357
280 nmdc:mga05p37_120284_c2
281 nmdc:mga05p37_247_c1
282 nmdc:mga05p37_252418_c1
283 nmdc:mga05p37_270209_c1
284 nmdc:mga05p37_668756_c1
285 nmdc:mga05p37_93559_c1
286 nmdc:mga09592_125003_c1
287 nmdc:mga0qj67_26893_c1
288 nmdc:mga0qj67_41172_c1
289 nmdc:mga06r32_78987_c1
290 nmdc:mga08y16_1358378_c1
291 nmdc:mga08y16_578704_c1
292 nmdc:mga08y16_8473_c1
293 nmdc:mga0n895_1569230_c1
294 nmdc:mga08x19_205261_c1
295 nmdc:mga08x19_2_c1
296 nmdc:mga08x19_439649_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13650

Asp_protease_2

Aspartyl protease

20

107

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
6w6r-assembly1.cif.gz_A wt htlv-1 protease in complex with umass6 (um6) 0.7858 5 98
4exh-assembly1.cif.gz_A the crystal structure of xmrv protease complexed with acetyl-pepstatin 0.7847 5 110
2jys-assembly1.cif.gz_A solution structure of simian foamy virus (mac) protease 0.7803 4 97
1b11-assembly1.cif.gz_A structure of feline immunodeficiency virus protease complexed with tl-3-093 0.7709 2 98
5fiv-assembly1.cif.gz_A-2 structural studies of hiv and fiv proteases complexed with an efficient inhibitor of fiv pr 0.7706 2 98
ID Description Score Start End Superfamily
af_Q54J95_15_120_2.40.70.10 Mainly Beta;Beta Barrel;Cathepsin D, subunit A; domain 1;Acid Proteases 0.8211 4 97 2.40.70.10
af_Q54VD1_290_401_2.40.70.10 Mainly Beta;Beta Barrel;Cathepsin D, subunit A; domain 1;Acid Proteases 0.8179 24 112 2.40.70.10
af_A0A0R0E8P4_731_833_2.40.70.10 Mainly Beta;Beta Barrel;Cathepsin D, subunit A; domain 1;Acid Proteases 0.7833 1 93 2.40.70.10
af_O16635_354_450_2.40.70.10 Mainly Beta;Beta Barrel;Cathepsin D, subunit A; domain 1;Acid Proteases 0.7803 1 99 2.40.70.10
2jysA00 Mainly Beta;Beta Barrel;Cathepsin D, subunit A; domain 1;Acid Proteases 0.7803 4 97 2.40.70.10
ID Description Score Start End GO Terms
AF-A0A7J3M8E6-F1-model_v4 Aspartyl protease 0.9608 1 83
AF-A0A6G3LJ89-F1-model_v4 Peptidase A2 domain-containing protein 0.9593 1 93
AF-A0A662GDL5-F1-model_v4 Retroviral aspartyl protease 0.9585 1 92 GO:0004190
GO:0006508
AF-A0A6N8UTL8-F1-model_v4 deleted 0.9564 1 96
AF-A0A7C5Y0K9-F1-model_v4 Aspartyl protease 0.956 21 93

Map