F201453

General Info

Members Datasets Scaffolds Average Seq Length
147 114 139 257

Family's Representative Sequence

Representative Sequence 3300048915|Ga0496112_0149152|Ga0496112_0149152_349_1203
Length 284
Sequence VDQAGKNKMKGRKNMKIVVIGGSGLIGSKVVQKLAAQGHQAVAASPDSGVNTLTGQGLAEVLKGAQVVVDVSNSPSFEDKAVMEFFTTSTGNLLKNEATAGVRHHIGLSVVGTERAIFQQSGYIRAKLAQENLIKESSIPYSLVHATQFFEFGRRIADDATDGNSVRVPPVLFQPIAADDVATAVAGVAVESPLNRTIEIAGPDQFHFNDFIAQVLSAQHDPRQVIADPHARYYGAEPGERTLVPSEGAQLGTTHFADWLKSSASQPPNAKLPSATAASATKRG

Samples

Sample ID Description Type Environment
1 2599185156 Rhizobium sp. NFR03 Isolate Rhizoplane
2 2643221651 Afipia sp. Root123D2 Isolate Unclassified
3 2643221688 Rhizobium sp. Root482 Isolate Unclassified
4 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
5 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
6 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
7 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
8 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
9 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
10 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
19 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
24 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
25 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
30 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
35 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
37 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
43 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
44 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
45 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
50 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
51 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
52 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
74 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
75 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
76 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
77 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
78 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
79 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
81 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
82 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
83 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
84 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
85 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
86 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
87 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
88 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
89 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
90 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
91 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
92 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
93 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
94 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
95 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
96 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
97 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
101 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
102 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
103 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
104 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
106 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
107 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
108 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
109 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
110 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
112 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
113 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
114 650716007 Agrobacterium fabacearum H13-3 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.88
Metatranscriptomes 0.68
Isolates 5.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.68
Nodule 0
Rhizoplane 2.04
Rhizosphere 91.84
Stem 0
Stem Tuber 0
Unclassified 5.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10037093 3300003320 Bacteria 5742
2 rootH2_10085996 3300003320 Bacteria 26590
3 rootH1_10097437 3300003323 Bacteria 3892
4 Ga0065707_10180899 3300005295 Bacteria 1419
5 Ga0070670_100110528 3300005331 Bacteria 2368
6 Ga0070670_100437205 3300005331 Bacteria 1158
7 Ga0070669_100252234 3300005353 Bacteria 1405
8 Ga0070671_100005165 3300005355 Bacteria 10392
9 Ga0070671_100036979 3300005355 Bacteria 4048
10 Ga0070659_100269328 3300005366 Bacteria 1415
11 Ga0070714_100032583 3300005435 Bacteria 4351
12 Ga0070705_100014790 3300005440 Bacteria 4023
13 Ga0070708_100019939 3300005445 Bacteria 5644
14 Ga0070662_100110688 3300005457 Bacteria 2092
15 Ga0070706_100037834 3300005467 Bacteria 4455
16 Ga0070697_100274491 3300005536 Bacteria 1445
17 Ga0068855_100028537 3300005563 Bacteria 6675
18 Ga0070664_100059673 3300005564 Bacteria 3246
19 Ga0068854_100085545 3300005578 Bacteria 2336
20 Ga0068856_100003215 3300005614 Bacteria 16633
21 Ga0068856_100238347 3300005614 Bacteria 1834
22 Ga0068852_100000770 3300005616 Bacteria 21117
23 Ga0068859_100117734 3300005617 Bacteria 2722
24 Ga0068863_100216424 3300005841 Bacteria 1845
25 Ga0068862_100055914 3300005844 Bacteria 3381
26 Ga0081538_10011574 3300005981 Bacteria 7138
27 Ga0070712_100202800 3300006175 Bacteria 1559
28 Ga0075428_100137247 3300006844 Bacteria 2659
29 Ga0075430_100016941 3300006846 Bacteria 6205
30 Ga0075431_100029692 3300006847 Bacteria 5629
31 Ga0075429_100023789 3300006880 Bacteria 5315
32 Ga0097620_100117734 3300006931 Bacteria 2722
33 Ga0075435_100189074 3300007076 Bacteria 1742
34 Ga0105240_10069240 3300009093 Bacteria 4369
35 Ga0105240_10116723 3300009093 Bacteria 3219
36 Ga0114129_10032923 3300009147 Bacteria 7325
37 Ga0105248_10168461 3300009177 Bacteria 2469
38 Ga0105248_10468560 3300009177 Bacteria 1420
39 Ga0105249_10069762 3300009553 Bacteria 3244
40 Ga0105239_10027268 3300010375 Bacteria 6288
41 Ga0105239_10211227 3300010375 Bacteria 2175
42 Ga0105246_10072176 3300011119 Bacteria 2433
43 Ga0157373_10026950 3300013100 Bacteria 4147
44 Ga0157370_10043041 3300013104 Bacteria 4348
45 Ga0157370_10101841 3300013104 Bacteria 2690
46 Ga0157369_10015259 3300013105 Bacteria 8668
47 Ga0157369_10129981 3300013105 Bacteria 2669
48 Ga0157369_10190284 3300013105 Bacteria 2157
49 Ga0157378_10256318 3300013297 Bacteria 1677
50 Ga0163162_10013171 3300013306 Bacteria 8077
51 Ga0157372_10149680 3300013307 Bacteria 2693
52 Ga0157375_10589159 3300013308 Bacteria 1272
53 Ga0163163_10508605 3300014325 Bacteria 1266
54 Ga0206355_1362213 3300020076 Bacteria 1119
55 Ga0207647_10003124 3300025904 Bacteria 12436
56 Ga0207647_10040613 3300025904 Bacteria 2928
57 Ga0207684_10011769 3300025910 Bacteria 7632
58 Ga0207695_10102969 3300025913 Bacteria 2847
59 Ga0207693_10193129 3300025915 Bacteria 1602
60 Ga0207660_10001085 3300025917 Bacteria 18123
61 Ga0207681_10239329 3300025923 Bacteria 1412
62 Ga0207650_10190124 3300025925 Bacteria 1640
63 Ga0207650_10399812 3300025925 Bacteria 1137
64 Ga0207644_10004827 3300025931 Bacteria 8780
65 Ga0207706_10017968 3300025933 Bacteria 6364
66 Ga0207706_10110116 3300025933 Bacteria 2423
67 Ga0207709_10086363 3300025935 Bacteria 2036
68 Ga0207711_10077831 3300025941 Bacteria 2892
69 Ga0207689_10413618 3300025942 Bacteria 1125
70 Ga0207667_10076192 3300025949 Bacteria 3481
71 Ga0207651_10308968 3300025960 Bacteria 1318
72 Ga0207712_10139852 3300025961 Bacteria 1856
73 Ga0207677_10403245 3300026023 Bacteria 1160
74 Ga0207678_10046753 3300026067 Bacteria 3743
75 Ga0207702_10002246 3300026078 Bacteria 18531
76 Ga0207683_10597228 3300026121 Bacteria 1022
77 Ga0207698_10000286 3300026142 Bacteria 30582
78 Ga0268265_10089439 3300028380 Bacteria 2456
79 Ga0307413_10392382 3300031824 Bacteria 1085
80 Ga0307407_10031092 3300031903 Bacteria 2888
81 Ga0307409_100442595 3300031995 Bacteria 1252
82 Ga0307409_100631747 3300031995 Bacteria 1062
83 Ga0307409_100770997 3300031995 Bacteria 967
84 Ga0307415_100032374 3300032126 Bacteria 3380
85 Ga0373935_0131106 3300035692 Bacteria 1684
86 Ga0373927_0077870 3300035695 Bacteria 2148
87 Ga0373937_0578743 3300036401 Bacteria 1066
88 Ga0395899_0093085 3300037312 Unclassified 2182
89 Ga0395900_0019724 3300037418 Bacteria 6873
90 Ga0395900_0122777 3300037418 Bacteria 2664
91 Ga0395900_0296498 3300037418 Bacteria 1604
92 Ga0395898_0042126 3300037466 Bacteria 4506
93 Ga0395898_0100714 3300037466 Bacteria 2775
94 Ga0395898_0208424 3300037466 Bacteria 1865
95 Ga0395898_0320916 3300037466 Bacteria 1477
96 Ga0395905_0064906 3300037471 Bacteria 3417
97 Ga0395905_0074425 3300037471 Bacteria 3183
98 Ga0395905_0098790 3300037471 Bacteria 2741
99 Ga0395905_0223778 3300037471 Bacteria 1761
100 Ga0395905_0743387 3300037471 Bacteria 883
101 Ga0395901_0023020 3300038443 Bacteria 6385
102 Ga0395901_0184053 3300038443 Bacteria 2191
103 Ga0395901_0220784 3300038443 Bacteria 1981
104 Ga0395901_0726029 3300038443 Bacteria 988
105 Ga0451853_0378427 3300041512 Bacteria 1275
106 Ga0439448_0003465 3300042005 Bacteria 4370
107 Ga0439455_0000889 3300042012 Bacteria 4618
108 Ga0439455_0075383 3300042012 Bacteria 911
109 Ga0495653_0142243 3300046463 Bacteria 1686
110 Ga0495585_0000041 3300046492 Bacteria 126995
111 Ga0495585_0000259 3300046492 Bacteria 54090
112 Ga0495637_0103669 3300046520 Bacteria 1109
113 Ga0495658_0056702 3300046683 Bacteria 2235
114 Ga0495669_0006070 3300046684 Bacteria 5042
115 Ga0495677_0002631 3300047445 Bacteria 7023
116 Ga0496111_0093628 3300048914 Bacteria 2203
117 Ga0496112_0149152 3300048915 Bacteria 2306
118 Ga0496122_0053648 3300048925 Bacteria 3037
119 Ga0501032_0004620 3300049569 Bacteria 10359
120 Ga0501033_0010917 3300049570 Bacteria 6961
121 Ga0501034_0059628 3300049571 Bacteria 3833
122 Ga0501034_0346177 3300049571 Bacteria 1415
123 Ga0501036_0097369 3300049572 Bacteria 2487
124 Ga0501037_0011079 3300049573 Bacteria 6634
125 Ga0501038_0002189 3300049574 Bacteria 18177
126 Ga0501038_0023017 3300049574 Bacteria 5577
127 Ga0501038_0522245 3300049574 Bacteria 906
128 Ga0501042_0094501 3300049578 Bacteria 2147
129 Ga0501046_0042193 3300049580 Bacteria 3637
130 Ga0501068_0087069 3300049584 Bacteria 1923
131 Ga0501070_0022178 3300049586 Bacteria 5318
132 Ga0501071_0080426 3300049587 Bacteria 2383
133 Ga0501072_0113722 3300049588 Bacteria 2155
134 Ga0501073_0025201 3300049589 Bacteria 4268
135 Ga0501035_0046995 3300049822 Bacteria 3878
136 Ga0501044_0042635 3300049823 Bacteria 4718
137 Ga0501044_0127795 3300049823 Bacteria 2538
138 nmdc:mga0qj67_2686_c1 3300050509 Bacteria 12746
139 Ga0500616_0000271 3300053153 Bacteria 77556

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025942 Ga0207689_10413618 Ga0207689_104136182 218
2 3300009177 Ga0105248_10468560 Ga0105248_104685602 239
3 3300013308 Ga0157375_10589159 Ga0157375_105891592 239
4 3300025960 Ga0207651_10308968 Ga0207651_103089682 239
5 3300005366 Ga0070659_100269328 Ga0070659_1002693282 241
6 3300031995 Ga0307409_100631747 Ga0307409_1006317471 241
7 3300032126 Ga0307415_100032374 Ga0307415_1000323743 241
8 3300041512 Ga0451853_0378427 Ga0451853_0378427_251_979 241
9 iso_pu_bacteria 2599185156 2599336157 246
10 iso_pu_bacteria 2643221688 2644492776 246
11 iso_pu_bacteria 650716007 650741920 246
12 iso_pu_bacteria 2739367874 2740059332 247
13 iso_pu_bacteria 2816332119 2816428180 247
14 iso_pu_bacteria 2887478801 2887479090 247
15 iso_pu_bacteria 2904555929 2904559346 247
16 3300006844 Ga0075428_100137247 Ga0075428_1001372472 248
17 3300006846 Ga0075430_100016941 Ga0075430_1000169414 248
18 3300006847 Ga0075431_100029692 Ga0075431_1000296923 248
19 3300006880 Ga0075429_100023789 Ga0075429_1000237893 248
20 3300009147 Ga0114129_10032923 Ga0114129_100329234 248
21 3300031995 Ga0307409_100770997 Ga0307409_1007709971 248
22 3300050509 nmdc:mga0qj67_2686_c1 nmdc:mga0qj67_2686_c1_7747_8496 248
23 iso_pu_bacteria 2643221651 2644289264 248
24 3300031903 Ga0307407_10031092 Ga0307407_100310923 249
25 3300031995 Ga0307409_100442595 Ga0307409_1004425952 249
26 3300013105 Ga0157369_10015259 Ga0157369_100152595 250
27 3300020076 Ga0206355_1362213 Ga0206355_13622132 250
28 3300037466 Ga0395898_0100714 Ga0395898_0100714_1527_2279 250
29 3300037471 Ga0395905_0743387 Ga0395905_0743387_85_837 250
30 3300038443 Ga0395901_0184053 Ga0395901_0184053_1351_2103 250
31 3300048925 Ga0496122_0053648 Ga0496122_0053648_1086_1838 250
32 3300049571 Ga0501034_0059628 Ga0501034_0059628_1791_2543 250
33 3300003320 rootH2_10085996 rootH2_1008599612 251
34 3300005295 Ga0065707_10180899 Ga0065707_101808991 251
35 3300005331 Ga0070670_100110528 Ga0070670_1001105282 251
36 3300005355 Ga0070671_100036979 Ga0070671_1000369793 251
37 3300005981 Ga0081538_10011574 Ga0081538_100115743 251
38 3300010375 Ga0105239_10027268 Ga0105239_100272684 251
39 3300011119 Ga0105246_10072176 Ga0105246_100721762 251
40 3300025925 Ga0207650_10190124 Ga0207650_101901242 251
41 3300025941 Ga0207711_10077831 Ga0207711_100778313 251
42 3300035695 Ga0373927_0077870 Ga0373927_0077870_49_804 251
43 3300046492 Ga0495585_0000041 Ga0495585_0000041_30766_31521 251
44 3300046492 Ga0495585_0000259 Ga0495585_0000259_29271_30125 251
45 3300046520 Ga0495637_0103669 Ga0495637_0103669_10_765 251
46 3300053153 Ga0500616_0000271 Ga0500616_0000271_45906_46721 251
47 3300025904 Ga0207647_10040613 Ga0207647_100406131 252
48 3300035692 Ga0373935_0131106 Ga0373935_0131106_651_1409 252
49 3300036401 Ga0373937_0578743 Ga0373937_0578743_247_1005 252
50 3300046463 Ga0495653_0142243 Ga0495653_0142243_397_1155 252
51 3300046683 Ga0495658_0056702 Ga0495658_0056702_1095_1853 252
52 3300048914 Ga0496111_0093628 Ga0496111_0093628_283_1041 252
53 3300003320 rootH2_10037093 rootH2_100370936 253
54 3300003323 rootH1_10097437 rootH1_100974373 253
55 3300005331 Ga0070670_100437205 Ga0070670_1004372052 253
56 3300005353 Ga0070669_100252234 Ga0070669_1002522342 253
57 3300005355 Ga0070671_100005165 Ga0070671_1000051658 253
58 3300005435 Ga0070714_100032583 Ga0070714_1000325834 253
59 3300005440 Ga0070705_100014790 Ga0070705_1000147903 253
60 3300005445 Ga0070708_100019939 Ga0070708_1000199396 253
61 3300005457 Ga0070662_100110688 Ga0070662_1001106882 253
62 3300005467 Ga0070706_100037834 Ga0070706_1000378343 253
63 3300005536 Ga0070697_100274491 Ga0070697_1002744912 253
64 3300005563 Ga0068855_100028537 Ga0068855_1000285372 253
65 3300005564 Ga0070664_100059673 Ga0070664_1000596732 253
66 3300005578 Ga0068854_100085545 Ga0068854_1000855453 253
67 3300005614 Ga0068856_100003215 Ga0068856_10000321515 253
68 3300005614 Ga0068856_100238347 Ga0068856_1002383472 253
69 3300005616 Ga0068852_100000770 Ga0068852_1000007703 253
70 3300005617 Ga0068859_100117734 Ga0068859_1001177343 253
71 3300005841 Ga0068863_100216424 Ga0068863_1002164243 253
72 3300005844 Ga0068862_100055914 Ga0068862_1000559142 253
73 3300006175 Ga0070712_100202800 Ga0070712_1002028001 253
74 3300006931 Ga0097620_100117734 Ga0097620_1001177343 253
75 3300007076 Ga0075435_100189074 Ga0075435_1001890742 253
76 3300009093 Ga0105240_10069240 Ga0105240_100692404 253
77 3300009093 Ga0105240_10116723 Ga0105240_101167234 253
78 3300009177 Ga0105248_10168461 Ga0105248_101684612 253
79 3300009553 Ga0105249_10069762 Ga0105249_100697624 253
80 3300010375 Ga0105239_10211227 Ga0105239_102112272 253
81 3300013100 Ga0157373_10026950 Ga0157373_100269503 253
82 3300013104 Ga0157370_10043041 Ga0157370_100430412 253
83 3300013104 Ga0157370_10101841 Ga0157370_101018411 253
84 3300013105 Ga0157369_10129981 Ga0157369_101299813 253
85 3300013105 Ga0157369_10190284 Ga0157369_101902842 253
86 3300013297 Ga0157378_10256318 Ga0157378_102563182 253
87 3300013306 Ga0163162_10013171 Ga0163162_100131715 253
88 3300013307 Ga0157372_10149680 Ga0157372_101496803 253
89 3300014325 Ga0163163_10508605 Ga0163163_105086052 253
90 3300025904 Ga0207647_10003124 Ga0207647_100031248 253
91 3300025910 Ga0207684_10011769 Ga0207684_100117693 253
92 3300025913 Ga0207695_10102969 Ga0207695_101029691 253
93 3300025915 Ga0207693_10193129 Ga0207693_101931291 253
94 3300025917 Ga0207660_10001085 Ga0207660_1000108510 253
95 3300025923 Ga0207681_10239329 Ga0207681_102393292 253
96 3300025925 Ga0207650_10399812 Ga0207650_103998122 253
97 3300025931 Ga0207644_10004827 Ga0207644_100048277 253
98 3300025933 Ga0207706_10017968 Ga0207706_100179688 253
99 3300025933 Ga0207706_10110116 Ga0207706_101101162 253
100 3300025935 Ga0207709_10086363 Ga0207709_100863632 253
101 3300025949 Ga0207667_10076192 Ga0207667_100761924 253
102 3300025961 Ga0207712_10139852 Ga0207712_101398522 253
103 3300026023 Ga0207677_10403245 Ga0207677_104032452 253
104 3300026067 Ga0207678_10046753 Ga0207678_100467532 253
105 3300026078 Ga0207702_10002246 Ga0207702_1000224615 253
106 3300026121 Ga0207683_10597228 Ga0207683_105972281 253
107 3300026142 Ga0207698_10000286 Ga0207698_1000028616 253
108 3300028380 Ga0268265_10089439 Ga0268265_100894391 253
109 3300031824 Ga0307413_10392382 Ga0307413_103923822 253
110 3300037312 Ga0395899_0093085 Ga0395899_0093085_1350_2141 253
111 3300037418 Ga0395900_0019724 Ga0395900_0019724_1659_2450 253
112 3300037418 Ga0395900_0122777 Ga0395900_0122777_564_1445 253
113 3300037418 Ga0395900_0296498 Ga0395900_0296498_326_1150 253
114 3300037466 Ga0395898_0042126 Ga0395898_0042126_2469_3266 253
115 3300037466 Ga0395898_0208424 Ga0395898_0208424_719_1510 253
116 3300037466 Ga0395898_0320916 Ga0395898_0320916_663_1454 253
117 3300037471 Ga0395905_0064906 Ga0395905_0064906_355_1236 253
118 3300037471 Ga0395905_0074425 Ga0395905_0074425_1278_2102 253
119 3300037471 Ga0395905_0098790 Ga0395905_0098790_804_1601 253
120 3300037471 Ga0395905_0223778 Ga0395905_0223778_844_1689 253
121 3300038443 Ga0395901_0023020 Ga0395901_0023020_4688_5485 253
122 3300038443 Ga0395901_0220784 Ga0395901_0220784_613_1437 253
123 3300038443 Ga0395901_0726029 Ga0395901_0726029_95_886 253
124 3300042005 Ga0439448_0003465 Ga0439448_0003465_50_811 253
125 3300042012 Ga0439455_0000889 Ga0439455_0000889_420_1181 253
126 3300042012 Ga0439455_0075383 Ga0439455_0075383_30_791 253
127 3300046684 Ga0495669_0006070 Ga0495669_0006070_2025_2819 253
128 3300047445 Ga0495677_0002631 Ga0495677_0002631_4639_5433 253
129 3300048915 Ga0496112_0149152 Ga0496112_0149152_349_1203 253
130 3300049569 Ga0501032_0004620 Ga0501032_0004620_6463_7224 253
131 3300049570 Ga0501033_0010917 Ga0501033_0010917_5561_6322 253
132 3300049571 Ga0501034_0346177 Ga0501034_0346177_500_1261 253
133 3300049572 Ga0501036_0097369 Ga0501036_0097369_1152_1946 253
134 3300049573 Ga0501037_0011079 Ga0501037_0011079_1111_1872 253
135 3300049574 Ga0501038_0002189 Ga0501038_0002189_3712_4530 253
136 3300049574 Ga0501038_0023017 Ga0501038_0023017_29_790 253
137 3300049574 Ga0501038_0522245 Ga0501038_0522245_10_804 253
138 3300049578 Ga0501042_0094501 Ga0501042_0094501_250_1011 253
139 3300049580 Ga0501046_0042193 Ga0501046_0042193_932_1693 253
140 3300049584 Ga0501068_0087069 Ga0501068_0087069_191_952 253
141 3300049586 Ga0501070_0022178 Ga0501070_0022178_81_842 253
142 3300049587 Ga0501071_0080426 Ga0501071_0080426_1329_2090 253
143 3300049588 Ga0501072_0113722 Ga0501072_0113722_1236_1997 253
144 3300049589 Ga0501073_0025201 Ga0501073_0025201_3018_3779 253
145 3300049822 Ga0501035_0046995 Ga0501035_0046995_106_867 253
146 3300049823 Ga0501044_0042635 Ga0501044_0042635_14_775 253
147 3300049823 Ga0501044_0127795 Ga0501044_0127795_84_878 253

Structural Annotation

Top 5 Hits

ID Description Score Start End
6jkh-assembly1.cif.gz_B the nad+-bound form of human nsdhl 0.8339 2 129
6jkg-assembly1.cif.gz_A the nad+-free form of human nsdhl 0.8251 2 130
3wj7-assembly1.cif.gz_C crystal structure of gox2253 0.8124 3 211
5xtb-assembly1.cif.gz_J cryo-em structure of human respiratory complex i matrix arm 0.804 1 213
6jkh-assembly1.cif.gz_A the nad+-bound form of human nsdhl 0.8035 2 130
ID Description Score Start End Superfamily
af_Q9N3H3_46_282_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8318 2 183 3.40.50.720
af_A0A1D6Q1L1_31_330_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.821 1 208 3.40.50.720
af_Q9DC69_47_264_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8103 2 181 3.40.50.720
af_P9WQP7_5_351_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8071 2 214 3.40.50.720
af_Q12177_1_262_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.8053 1 212 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A2V6TUZ8-F1-model_v4 NmrA family transcriptional regulator 0.9968 1 87
AF-A0A2V7CXT5-F1-model_v4 NmrA family transcriptional regulator 0.9965 1 129
AF-A0A1G9U2B0-F1-model_v4 NAD(P)H-binding 0.9935 1 141
AF-A0A6G3DJR2-F1-model_v4 NmrA family transcriptional regulator 0.9931 1 136
AF-A0A535W482-F1-model_v4 SDR family oxidoreductase 0.9929 1 245

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pLDDT pTM Quality
95.53 0.92 High
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Predicted Structure (AlphaFold2)

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