F199771

General Info

Members Datasets Scaffolds Average Seq Length
147 71 294 304

Family's Representative Sequence

Representative Sequence 3300005530|Ga0070679_100001704|Ga0070679_10000170413
Length 343
Sequence MANAGRTYCDVETLESSGRNLRRRPPVAANFLMTSPIIAVFAGGTSAERDVSLGSGKACAVALARTFPTRLFQIEAEALPPDLDPRRHLVFSTLHGTFGEDGGMQRLLDAAGVTYAGCDATASALTMDKSRTKEAAAAAGVPVIAGLRFDATAKPSADAIIAQFGERLVVKPNAEGSSVGLAIIETRAALDAKLAAIAQGAWLVERRVFGRELSVGVLRGKAMGVVEIRPKSGVYDYASKYTKGLTEYLAPAPLDAAVYQAIQHAAEKAFQACGCRDYARVDFMFSEASGYYLLEINTLPGMKETSLLPMSARCAGLDFTGLVREMALPALQRFQAAVSAPVS

Samples

Sample ID Description Type Environment
1 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
8 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
9 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
10 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
11 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
12 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
13 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
14 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
15 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
16 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
18 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
19 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
20 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
22 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
23 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
24 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
25 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
26 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
27 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
28 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
29 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
30 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
31 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
32 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
33 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
34 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
35 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
36 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
37 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
38 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
39 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
40 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
41 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
42 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
43 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
44 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
45 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
46 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
47 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
48 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
49 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
50 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
51 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
52 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
53 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
54 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
55 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
56 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
57 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
58 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
59 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
60 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
61 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
62 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
63 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
68 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
69 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
71 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.32
Metatranscriptomes 0
Isolates 0.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 95.24
Stem 0
Stem Tuber 0
Unclassified 5.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070679_100001704 3300005530 Bacteria 19803
2 rootH2_10006349 3300003320 Bacteria 25989
3 rootL2_10080216 3300003322 Bacteria 4026
4 rootH1_10120913 3300003323 Bacteria 2170
5 rootH1_10280211 3300003323 Bacteria 3662
6 Ga0068869_100001702 3300005334 Bacteria 13143
7 Ga0068868_100001820 3300005338 Bacteria 14657
8 Ga0068868_100082885 3300005338 Bacteria 2573
9 Ga0068867_100002141 3300005459 Bacteria 13858
10 Ga0068856_100000639 3300005614 Bacteria 38100
11 Ga0070717_10009348 3300006028 Bacteria 7366
12 Ga0068871_100029257 3300006358 Bacteria 4325
13 Ga0068865_100001606 3300006881 Bacteria 13237
14 Ga0157369_10197888 3300013105 Bacteria 2109
15 Ga0163163_10012730 3300014325 Bacteria 7673
16 Ga0207652_10053782 3300025921 Bacteria 3459
17 Ga0207704_10070232 3300025938 Bacteria 2217
18 Ga0207689_10001681 3300025942 Bacteria 21011
19 Ga0207661_10022918 3300025944 Bacteria 4711
20 Ga0207677_10029252 3300026023 Bacteria 3498
21 Ga0207677_10116434 3300026023 Bacteria 2001
22 Ga0207702_10000155 3300026078 Bacteria 80813
23 Ga0207648_10006475 3300026089 Bacteria 11631
24 Ga0265337_1002995 3300028556 Bacteria 7487
25 Ga0265337_1005270 3300028556 Bacteria 5164
26 Ga0265319_1000298 3300028563 Bacteria 36808
27 Ga0265319_1001997 3300028563 Bacteria 11505
28 Ga0265319_1007464 3300028563 Bacteria 4913
29 Ga0265319_1010307 3300028563 Bacteria 3908
30 Ga0265319_1012147 3300028563 Bacteria 3492
31 Ga0265319_1024531 3300028563 Bacteria 2169
32 Ga0265319_1028278 3300028563 Unclassified 1978
33 Ga0265334_10002193 3300028573 Bacteria 9188
34 Ga0265318_10000007 3300028577 Bacteria 280699
35 Ga0265318_10002561 3300028577 Bacteria 9637
36 Ga0265318_10002630 3300028577 Bacteria 9474
37 Ga0265318_10015414 3300028577 Bacteria 3180
38 Ga0265318_10028540 3300028577 Bacteria 2181
39 Ga0265323_10003095 3300028653 Bacteria 7400
40 Ga0265322_10011911 3300028654 Bacteria 2516
41 Ga0265322_10018859 3300028654 Unclassified 1981
42 Ga0265322_10028449 3300028654 Unclassified 1596
43 Ga0265322_10050560 3300028654 Bacteria 1180
44 Ga0265336_10024231 3300028666 Bacteria 1919
45 Ga0265338_10012637 3300028800 Bacteria 9613
46 Ga0265338_10014004 3300028800 Bacteria 8984
47 Ga0265330_10045329 3300031235 Unclassified 1939
48 Ga0265332_10057905 3300031238 Bacteria 1659
49 Ga0265328_10017738 3300031239 Bacteria 2755
50 Ga0265320_10000520 3300031240 Bacteria 29871
51 Ga0265320_10002628 3300031240 Bacteria 12467
52 Ga0265320_10009749 3300031240 Bacteria 5762
53 Ga0265320_10028471 3300031240 Bacteria 2900
54 Ga0265320_10051519 3300031240 Unclassified 1996
55 Ga0265320_10060572 3300031240 Bacteria 1807
56 Ga0265320_10069145 3300031240 Bacteria 1667
57 Ga0265320_10098431 3300031240 Bacteria 1349
58 Ga0265320_10104298 3300031240 Bacteria 1303
59 Ga0265325_10020315 3300031241 Bacteria 3662
60 Ga0265331_10005582 3300031250 Bacteria 7574
61 Ga0265331_10006857 3300031250 Bacteria 6657
62 Ga0265331_10012433 3300031250 Bacteria 4611
63 Ga0265327_10000091 3300031251 Bacteria 196369
64 Ga0265327_10004492 3300031251 Bacteria 12323
65 Ga0265327_10007484 3300031251 Bacteria 8419
66 Ga0265327_10022751 3300031251 Bacteria 3734
67 Ga0265327_10054630 3300031251 Bacteria 2066
68 Ga0265327_10065332 3300031251 Bacteria 1840
69 Ga0265316_10008855 3300031344 Bacteria 9294
70 Ga0265316_10017483 3300031344 Bacteria 6194
71 Ga0265316_10017818 3300031344 Bacteria 6124
72 Ga0265316_10019902 3300031344 Bacteria 5728
73 Ga0265316_10030280 3300031344 Bacteria 4438
74 Ga0265316_10133991 3300031344 Bacteria 1864
75 Ga0307509_10295654 3300031507 Unclassified 1371
76 Ga0307408_100000003 3300031548 Bacteria 618438
77 Ga0265313_10001833 3300031595 Bacteria 19383
78 Ga0265313_10001991 3300031595 Bacteria 18419
79 Ga0265313_10003044 3300031595 Bacteria 13917
80 Ga0265313_10004299 3300031595 Bacteria 11028
81 Ga0265313_10005046 3300031595 Bacteria 9841
82 Ga0265313_10008991 3300031595 Bacteria 6551
83 Ga0265313_10028046 3300031595 Bacteria 2934
84 Ga0307508_10001088 3300031616 Bacteria 31450
85 Ga0265314_10002313 3300031711 Bacteria 19685
86 Ga0265314_10003210 3300031711 Bacteria 15992
87 Ga0265314_10004972 3300031711 Bacteria 12119
88 Ga0265314_10007455 3300031711 Bacteria 9488
89 Ga0265314_10007677 3300031711 Bacteria 9326
90 Ga0265314_10011528 3300031711 Bacteria 7282
91 Ga0265314_10207477 3300031711 Bacteria 1153
92 Ga0265342_10017155 3300031712 Bacteria 4716
93 Ga0265342_10054572 3300031712 Unclassified 2374
94 Ga0265342_10062947 3300031712 Bacteria 2182
95 Ga0307413_10168008 3300031824 Bacteria 1549
96 Ga0307410_10001051 3300031852 Bacteria 12004
97 Ga0307412_10007310 3300031911 Bacteria 6263
98 Ga0307409_100000013 3300031995 Bacteria 64596
99 Ga0307416_100000057 3300032002 Bacteria 105624
100 Ga0395905_0000119 3300037471 Bacteria 131498
101 Ga0451577_0000024 3300042876 Bacteria 411758
102 Ga0451577_0109936 3300042876 Bacteria 2465
103 Ga0451577_0147993 3300042876 Bacteria 2112
104 Ga0453683_0001815 3300044673 Bacteria 17625
105 Ga0466961_0155750 3300044693 Unclassified 1425
106 Ga0453684_0007107 3300044712 Bacteria 20864
107 Ga0453684_0051822 3300044712 Bacteria 5373
108 Ga0453684_0263023 3300044712 Bacteria 1975
109 Ga0453684_0281652 3300044712 Bacteria 1896
110 Ga0466957_0158711 3300044842 Bacteria 1468
111 Ga0451576_0002775 3300045051 Bacteria 25283
112 Ga0451576_0003405 3300045051 Bacteria 21917
113 Ga0451576_0007566 3300045051 Bacteria 12948
114 Ga0451576_0071520 3300045051 Bacteria 3610
115 Ga0501031_0002898 3300049568 Bacteria 10964
116 Ga0501032_0001723 3300049569 Bacteria 17307
117 Ga0501032_0017097 3300049569 Bacteria 5097
118 Ga0501033_0000882 3300049570 Bacteria 27415
119 Ga0501033_0003381 3300049570 Bacteria 13158
120 Ga0501036_0008996 3300049572 Bacteria 8212
121 Ga0501037_0215067 3300049573 Bacteria 1354
122 Ga0501038_0001105 3300049574 Bacteria 24439
123 Ga0501039_0015180 3300049575 Bacteria 5894
124 Ga0501042_0008826 3300049578 Bacteria 6683
125 Ga0501043_0009655 3300049579 Bacteria 7562
126 Ga0501046_0000796 3300049580 Bacteria 30570
127 Ga0501046_0004770 3300049580 Bacteria 12232
128 Ga0501046_0017173 3300049580 Bacteria 6047
129 Ga0501046_0076667 3300049580 Bacteria 2589
130 Ga0501047_0026521 3300049581 Bacteria 5575
131 Ga0501047_0029210 3300049581 Bacteria 5317
132 Ga0501047_0036453 3300049581 Bacteria 4753
133 Ga0501047_0042822 3300049581 Bacteria 4373
134 Ga0501048_0001499 3300049582 Bacteria 17673
135 Ga0501048_0032508 3300049582 Bacteria 3770
136 Ga0501083_0001671 3300049744 Bacteria 15142
137 Ga0501083_0013544 3300049744 Bacteria 5701
138 Ga0501083_0039025 3300049744 Bacteria 3226
139 Ga0501035_0002594 3300049822 Bacteria 17645
140 Ga0501035_0002713 3300049822 Bacteria 17207
141 Ga0501035_0009376 3300049822 Bacteria 9100
142 Ga0501035_0162386 3300049822 Bacteria 1933
143 Ga0501044_0000206 3300049823 Bacteria 75006
144 Ga0501044_0003350 3300049823 Bacteria 18063
145 Ga0501044_0155980 3300049823 Bacteria 2262
146 Ga0501045_0042715 3300049824 Bacteria 3301
147 2788435629 2786546940 Bacteria 6396474
148 Ga0070679_100001704
149 rootH2_10006349
150 rootL2_10080216
151 rootH1_10120913
152 rootH1_10280211
153 Ga0068869_100001702
154 Ga0068868_100001820
155 Ga0068868_100082885
156 Ga0068867_100002141
157 Ga0068856_100000639
158 Ga0070717_10009348
159 Ga0068871_100029257
160 Ga0068865_100001606
161 Ga0157369_10197888
162 Ga0163163_10012730
163 Ga0207652_10053782
164 Ga0207704_10070232
165 Ga0207689_10001681
166 Ga0207661_10022918
167 Ga0207677_10029252
168 Ga0207677_10116434
169 Ga0207702_10000155
170 Ga0207648_10006475
171 Ga0265337_1002995
172 Ga0265337_1005270
173 Ga0265319_1000298
174 Ga0265319_1001997
175 Ga0265319_1007464
176 Ga0265319_1010307
177 Ga0265319_1012147
178 Ga0265319_1024531
179 Ga0265319_1028278
180 Ga0265334_10002193
181 Ga0265318_10000007
182 Ga0265318_10002561
183 Ga0265318_10002630
184 Ga0265318_10015414
185 Ga0265318_10028540
186 Ga0265323_10003095
187 Ga0265322_10011911
188 Ga0265322_10018859
189 Ga0265322_10028449
190 Ga0265322_10050560
191 Ga0265336_10024231
192 Ga0265338_10012637
193 Ga0265338_10014004
194 Ga0265330_10045329
195 Ga0265332_10057905
196 Ga0265328_10017738
197 Ga0265320_10000520
198 Ga0265320_10002628
199 Ga0265320_10009749
200 Ga0265320_10028471
201 Ga0265320_10051519
202 Ga0265320_10060572
203 Ga0265320_10069145
204 Ga0265320_10098431
205 Ga0265320_10104298
206 Ga0265325_10020315
207 Ga0265331_10005582
208 Ga0265331_10006857
209 Ga0265331_10012433
210 Ga0265327_10000091
211 Ga0265327_10004492
212 Ga0265327_10007484
213 Ga0265327_10022751
214 Ga0265327_10054630
215 Ga0265327_10065332
216 Ga0265316_10008855
217 Ga0265316_10017483
218 Ga0265316_10017818
219 Ga0265316_10019902
220 Ga0265316_10030280
221 Ga0265316_10133991
222 Ga0307509_10295654
223 Ga0307408_100000003
224 Ga0265313_10001833
225 Ga0265313_10001991
226 Ga0265313_10003044
227 Ga0265313_10004299
228 Ga0265313_10005046
229 Ga0265313_10008991
230 Ga0265313_10028046
231 Ga0307508_10001088
232 Ga0265314_10002313
233 Ga0265314_10003210
234 Ga0265314_10004972
235 Ga0265314_10007455
236 Ga0265314_10007677
237 Ga0265314_10011528
238 Ga0265314_10207477
239 Ga0265342_10017155
240 Ga0265342_10054572
241 Ga0265342_10062947
242 Ga0307413_10168008
243 Ga0307410_10001051
244 Ga0307412_10007310
245 Ga0307409_100000013
246 Ga0307416_100000057
247 Ga0395905_0000119
248 Ga0451577_0000024
249 Ga0451577_0109936
250 Ga0451577_0147993
251 Ga0453683_0001815
252 Ga0466961_0155750
253 Ga0453684_0007107
254 Ga0453684_0051822
255 Ga0453684_0263023
256 Ga0453684_0281652
257 Ga0466957_0158711
258 Ga0451576_0002775
259 Ga0451576_0003405
260 Ga0451576_0007566
261 Ga0451576_0071520
262 Ga0501031_0002898
263 Ga0501032_0001723
264 Ga0501032_0017097
265 Ga0501033_0000882
266 Ga0501033_0003381
267 Ga0501036_0008996
268 Ga0501037_0215067
269 Ga0501038_0001105
270 Ga0501039_0015180
271 Ga0501042_0008826
272 Ga0501043_0009655
273 Ga0501046_0000796
274 Ga0501046_0004770
275 Ga0501046_0017173
276 Ga0501046_0076667
277 Ga0501047_0026521
278 Ga0501047_0029210
279 Ga0501047_0036453
280 Ga0501047_0042822
281 Ga0501048_0001499
282 Ga0501048_0032508
283 Ga0501083_0001671
284 Ga0501083_0013544
285 Ga0501083_0039025
286 Ga0501035_0002594
287 Ga0501035_0002713
288 Ga0501035_0009376
289 Ga0501035_0162386
290 Ga0501044_0000206
291 Ga0501044_0003350
292 Ga0501044_0155980
293 Ga0501045_0042715
294 2788435629

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07478

Dala_Dala_lig_C

D-ala D-ala ligase C-terminus

136

327

0.91

PF02786

CPSase_L_D2

Carbamoyl-phosphate synthase L chain, ATP binding domain

128

318

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
4zqi-assembly2.cif.gz_C crystal structure of apo d-alanine-d-alanine ligase(ddl) from yersinia pestis 0.9102 6 298
5nri-assembly2.cif.gz_B crystal structure of burkholderia pseudomallei d-alanine-d-alanine ligase in complex with amp and d-ala-d-ala 0.9058 2 301
5bpf-assembly1.cif.gz_B crystal structure of adp complexed d-alanine-d-alanine ligase(ddl) from yersinia pestis 0.9011 6 298
5bpf-assembly1.cif.gz_A crystal structure of adp complexed d-alanine-d-alanine ligase(ddl) from yersinia pestis 0.894 6 298
5c1p-assembly2.cif.gz_D crystal structure of adp and d-alanyl-d-alanine complexed d-alanine-d-alanine ligase(ddl) from yersinia pestis 0.8939 6 298
ID Description Score Start End Superfamily
af_P9WP31_235_360_3.30.470.20 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.9118 180 294 3.30.470.20
af_P9WP31_140_368_3.40.50.20 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.8867 87 304 3.40.50.20
3se7F02 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.8862 88 301 3.30.470.20
5dmxB02 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.8767 91 286 3.30.470.20
5bpfD02 Alpha Beta;2-Layer Sandwich;D-amino Acid Aminotransferase; Chain A, domain 1;ATP-grasp fold, B domain 0.8747 87 304 3.30.470.20
ID Description Score Start End GO Terms
AF-A0A1H1KXQ9-F1-model_v4 D-alanine-D-alanine ligase 0.9793 4 309 GO:0005524
GO:0005737
GO:0008716
GO:0046872
GO:0071555
AF-A0A7X1EA70-F1-model_v4 D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase) 0.9773 4 306 GO:0005524
GO:0005737
GO:0008360
GO:0008716
GO:0009252
GO:0046872
GO:0071555
AF-A0A2V2C2H7-F1-model_v4 D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase) 0.9733 5 310 GO:0005524
GO:0005737
GO:0008360
GO:0008716
GO:0009252
GO:0046872
GO:0071555
AF-A0A7X1EA70-F1-model_v4 D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase) 0.9648 4 306 GO:0005524
GO:0005737
GO:0008360
GO:0008716
GO:0009252
GO:0046872
GO:0071555
AF-A0A2V2C2H7-F1-model_v4 D-alanine--D-alanine ligase (EC 6.3.2.4) (D-Ala-D-Ala ligase) (D-alanylalanine synthetase) 0.961 5 310 GO:0005524
GO:0005737
GO:0008360
GO:0008716
GO:0009252
GO:0046872
GO:0071555

Map