F199677

General Info

Members Datasets Scaffolds Average Seq Length
147 111 294 312

Family's Representative Sequence

Representative Sequence 3300005445|Ga0070708_100013910|Ga0070708_1000139107
Length 339
Sequence MTTGLVFDERFLLHRAPYNHPEHPGRLTAIRAGLEREDLMSACRRVPARPAADAELTVVHTLEHVRAIDATARRDFCQLDADTYTCRDSAAAARLAAGSLVDLVLAVRRGSLDNGFGLLRPPGHHAEADCAMGFCLYNNVAIAARAALADGAARILIVDWDLHHGNGTQNTFWDDPAVVYFSTHQWPLYPGTGAAQEAGGDGARGRTINLPWPAGMGDPEYLAAFDELLLPMAREFEPDLVLVSCGFDAALGDLLGQMRITPAGYARMTHRLCGLARGRVVLALEGGYNLDAIARSAAACMRVLQGEEPAERPIPQPSPAGRRAIDEARRIQRAYWKSI

Samples

Sample ID Description Type Environment
1 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
6 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
7 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
14 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
17 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
23 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
24 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
25 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
28 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
31 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
32 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
35 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
36 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
37 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
51 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
52 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
53 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
54 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
55 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
56 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
57 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
58 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
59 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
60 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
61 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
62 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
63 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
64 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
65 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
66 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
67 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
68 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
69 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
70 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
71 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
72 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
73 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
74 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
75 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
76 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
77 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
78 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
79 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
80 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
81 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
82 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
83 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
84 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
85 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
86 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
87 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
88 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
98 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
99 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
100 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
101 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
102 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
103 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
104 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
105 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
106 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
107 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
108 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
109 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
110 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
111 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.32
Metatranscriptomes 0
Isolates 0.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.68
Nodule 0
Rhizoplane 0
Rhizosphere 95.24
Stem 0
Stem Tuber 0
Unclassified 3.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070708_100013910 3300005445 Bacteria 6610
2 JGI25406J46586_10000966 3300003203 Bacteria 13507
3 Ga0070666_10000113 3300005335 Bacteria 55648
4 Ga0070689_100380701 3300005340 Bacteria 1189
5 Ga0070661_100117921 3300005344 Bacteria 1986
6 Ga0070714_100017943 3300005435 Bacteria 5739
7 Ga0070694_100305061 3300005444 Bacteria 1221
8 Ga0070681_10314278 3300005458 Bacteria 1476
9 Ga0070706_100000884 3300005467 Bacteria 32815
10 Ga0070706_100003811 3300005467 Bacteria 14729
11 Ga0070707_100006352 3300005468 Bacteria 10991
12 Ga0070698_100000729 3300005471 Bacteria 35340
13 Ga0070684_100499707 3300005535 Bacteria 1126
14 Ga0070697_100013042 3300005536 Bacteria 6515
15 Ga0070697_100014454 3300005536 Bacteria 6199
16 Ga0070704_100156999 3300005549 Bacteria 1795
17 Ga0068859_100217465 3300005617 Bacteria 1998
18 Ga0068859_100247358 3300005617 Bacteria 1873
19 Ga0068863_100155884 3300005841 Bacteria 2187
20 Ga0068862_100159439 3300005844 Bacteria 2013
21 Ga0081539_10000101 3300005985 Bacteria 198612
22 Ga0070717_10115317 3300006028 Bacteria 2296
23 Ga0097621_100328084 3300006237 Bacteria 1357
24 Ga0097621_100341860 3300006237 Bacteria 1329
25 Ga0097620_100217462 3300006931 Bacteria 1998
26 Ga0097620_100247357 3300006931 Bacteria 1873
27 Ga0075435_100078360 3300007076 Bacteria 2710
28 Ga0105240_10180647 3300009093 Bacteria 2490
29 Ga0111539_10193116 3300009094 Bacteria 2375
30 Ga0105243_10270391 3300009148 Bacteria 1526
31 Ga0105248_10078662 3300009177 Bacteria 3707
32 Ga0105248_10147847 3300009177 Bacteria 2651
33 Ga0105248_10328232 3300009177 Bacteria 1723
34 Ga0105237_10039721 3300009545 Bacteria 4749
35 Ga0105239_10004795 3300010375 Bacteria 16050
36 Ga0157369_10043698 3300013105 Bacteria 4883
37 Ga0157378_10000084 3300013297 Bacteria 87722
38 Ga0157372_10635473 3300013307 Unclassified 1243
39 Ga0157375_10067293 3300013308 Bacteria 3579
40 Ga0163163_10001170 3300014325 Bacteria 22285
41 Ga0163163_10072562 3300014325 Bacteria 3432
42 Ga0157376_10251463 3300014969 Bacteria 1651
43 Ga0213876_10015339 3300021384 Bacteria 4057
44 Ga0213875_10005773 3300021388 Bacteria 6591
45 Ga0213875_10074400 3300021388 Bacteria 1585
46 Ga0207684_10099213 3300025910 Bacteria 2487
47 Ga0207695_10182810 3300025913 Bacteria 2017
48 Ga0207671_10099221 3300025914 Bacteria 2204
49 Ga0207660_10564885 3300025917 Bacteria 926
50 Ga0207646_10004941 3300025922 Bacteria 14256
51 Ga0207700_10014648 3300025928 Bacteria 5145
52 Ga0207664_10117335 3300025929 Bacteria 2222
53 Ga0207706_10241376 3300025933 Bacteria 1579
54 Ga0207670_10037829 3300025936 Bacteria 3147
55 Ga0207711_10046531 3300025941 Bacteria 3707
56 Ga0207711_10127066 3300025941 Bacteria 2282
57 Ga0207641_10106124 3300026088 Bacteria 2482
58 Ga0207676_10054668 3300026095 Bacteria 3130
59 Ga0207676_10079072 3300026095 Bacteria 2666
60 Ga0268265_10216222 3300028380 Bacteria 1674
61 Ga0265316_10000969 3300031344 Bacteria 31275
62 Ga0265316_10008869 3300031344 Bacteria 9287
63 Ga0265316_10331320 3300031344 Bacteria 1104
64 Ga0316578_10101642 3300031728 Bacteria 1724
65 Ga0316574_0173652 3300035398 Bacteria 1387
66 Ga0373927_0145212 3300035695 Bacteria 1553
67 Ga0373947_0139102 3300035725 Bacteria 1556
68 Ga0373937_0170329 3300036401 Bacteria 2043
69 Ga0373937_0714062 3300036401 Bacteria 949
70 Ga0316584_0023376 3300036712 Bacteria 4516
71 Ga0373925_0104491 3300037068 Bacteria 2181
72 Ga0373925_0315184 3300037068 Bacteria 1265
73 Ga0395899_0030248 3300037312 Bacteria 4073
74 Ga0395899_0057913 3300037312 Bacteria 2858
75 Ga0395900_0013178 3300037418 Bacteria 8450
76 Ga0395898_0067383 3300037466 Bacteria 3465
77 Ga0436364_0290522 3300037853 Bacteria 2036
78 Ga0436364_0839607 3300037853 Bacteria 12788
79 Ga0395901_0018655 3300038443 Bacteria 7085
80 Ga0436365_0359531 3300039437 Bacteria 3312
81 Ga0436360_0805841 3300039438 Bacteria 1099
82 Ga0436362_0890279 3300039453 Bacteria 2621
83 Ga0451577_0294140 3300042876 Bacteria 1472
84 Ga0453684_0002663 3300044712 Bacteria 42577
85 Ga0466960_0163715 3300044901 Bacteria 1196
86 Ga0451576_0178094 3300045051 Bacteria 2220
87 Ga0451576_0197570 3300045051 Unclassified 2101
88 Ga0495651_0009642 3300046462 Bacteria 7423
89 Ga0495651_0029032 3300046462 Bacteria 4313
90 Ga0495580_0000455 3300046472 Bacteria 33864
91 Ga0495580_0034964 3300046472 Bacteria 3615
92 Ga0495580_0137327 3300046472 Bacteria 1695
93 Ga0495662_0033623 3300046476 Bacteria 2477
94 Ga0495664_0002986 3300046477 Bacteria 9142
95 Ga0495608_0025443 3300046511 Bacteria 4041
96 Ga0495608_0248351 3300046511 Bacteria 1110
97 Ga0495628_0138937 3300046516 Bacteria 1855
98 Ga0495628_0351354 3300046516 Bacteria 1084
99 Ga0495666_0109325 3300046526 Bacteria 1299
100 Ga0495665_0050298 3300046531 Bacteria 2209
101 Ga0495665_0090920 3300046531 Bacteria 1604
102 Ga0495640_0197539 3300046533 Bacteria 1276
103 Ga0495640_0210296 3300046533 Bacteria 1230
104 Ga0495645_0001219 3300046543 Bacteria 17580
105 Ga0495645_0002242 3300046543 Bacteria 13150
106 Ga0495645_0146207 3300046543 Bacteria 1646
107 Ga0495635_0042640 3300046663 Bacteria 3133
108 Ga0495599_0084618 3300046678 Bacteria 1981
109 Ga0495623_0060632 3300046679 Bacteria 2374
110 Ga0495623_0194688 3300046679 Bacteria 1169
111 Ga0495658_0164827 3300046683 Bacteria 1369
112 Ga0495600_0014100 3300046809 Bacteria 5034
113 Ga0495674_0068032 3300047319 Bacteria 3084
114 Ga0495680_0093501 3300047322 Bacteria 2251
115 Ga0495684_0005275 3300047471 Bacteria 10064
116 Ga0495684_0072502 3300047471 Bacteria 2616
117 Ga0501031_0013322 3300049568 Bacteria 5367
118 Ga0501031_0077864 3300049568 Bacteria 2160
119 Ga0501036_0021691 3300049572 Bacteria 5399
120 Ga0501037_0096404 3300049573 Bacteria 2138
121 Ga0501040_0006920 3300049576 Bacteria 7343
122 Ga0501041_0046616 3300049577 Bacteria 2637
123 Ga0501042_0004641 3300049578 Bacteria 8768
124 Ga0501046_0081809 3300049580 Bacteria 2494
125 Ga0501047_0046134 3300049581 Bacteria 4212
126 Ga0501047_0090618 3300049581 Bacteria 2935
127 Ga0501047_0215775 3300049581 Bacteria 1776
128 Ga0501048_0014941 3300049582 Bacteria 5743
129 Ga0501067_0061897 3300049583 Bacteria 2072
130 Ga0501070_0253886 3300049586 Unclassified 1438
131 Ga0501071_0003973 3300049587 Bacteria 9329
132 Ga0501071_0228797 3300049587 Bacteria 1401
133 Ga0501072_0014251 3300049588 Bacteria 6091
134 Ga0501072_0263786 3300049588 Bacteria 1371
135 Ga0501074_0009629 3300049590 Bacteria 7012
136 Ga0501075_0006675 3300049591 Bacteria 7959
137 Ga0501076_0008316 3300049592 Bacteria 7604
138 Ga0501081_0125680 3300049743 Unclassified 1829
139 Ga0501083_0053727 3300049744 Bacteria 2704
140 Ga0501044_0236834 3300049823 Bacteria 1771
141 nmdc:mga0rr50_50859_c1 3300050513 Bacteria 3072
142 Ga0500642_0008073 3300053130 Bacteria 3579
143 Ga0501084_0135263 3300054114 Unclassified 2075
144 Ga0501082_0001480 3300060353 Bacteria 20642
145 Ga0501082_0066492 3300060353 Bacteria 3105
146 Ga0501082_0068828 3300060353 Bacteria 3048
147 2894777534 2894772417 Bacteria 5305674
148 Ga0070708_100013910
149 JGI25406J46586_10000966
150 Ga0070666_10000113
151 Ga0070689_100380701
152 Ga0070661_100117921
153 Ga0070714_100017943
154 Ga0070694_100305061
155 Ga0070681_10314278
156 Ga0070706_100000884
157 Ga0070706_100003811
158 Ga0070707_100006352
159 Ga0070698_100000729
160 Ga0070684_100499707
161 Ga0070697_100013042
162 Ga0070697_100014454
163 Ga0070704_100156999
164 Ga0068859_100217465
165 Ga0068859_100247358
166 Ga0068863_100155884
167 Ga0068862_100159439
168 Ga0081539_10000101
169 Ga0070717_10115317
170 Ga0097621_100328084
171 Ga0097621_100341860
172 Ga0097620_100217462
173 Ga0097620_100247357
174 Ga0075435_100078360
175 Ga0105240_10180647
176 Ga0111539_10193116
177 Ga0105243_10270391
178 Ga0105248_10078662
179 Ga0105248_10147847
180 Ga0105248_10328232
181 Ga0105237_10039721
182 Ga0105239_10004795
183 Ga0157369_10043698
184 Ga0157378_10000084
185 Ga0157372_10635473
186 Ga0157375_10067293
187 Ga0163163_10001170
188 Ga0163163_10072562
189 Ga0157376_10251463
190 Ga0213876_10015339
191 Ga0213875_10005773
192 Ga0213875_10074400
193 Ga0207684_10099213
194 Ga0207695_10182810
195 Ga0207671_10099221
196 Ga0207660_10564885
197 Ga0207646_10004941
198 Ga0207700_10014648
199 Ga0207664_10117335
200 Ga0207706_10241376
201 Ga0207670_10037829
202 Ga0207711_10046531
203 Ga0207711_10127066
204 Ga0207641_10106124
205 Ga0207676_10054668
206 Ga0207676_10079072
207 Ga0268265_10216222
208 Ga0265316_10000969
209 Ga0265316_10008869
210 Ga0265316_10331320
211 Ga0316578_10101642
212 Ga0316574_0173652
213 Ga0373927_0145212
214 Ga0373947_0139102
215 Ga0373937_0170329
216 Ga0373937_0714062
217 Ga0316584_0023376
218 Ga0373925_0104491
219 Ga0373925_0315184
220 Ga0395899_0030248
221 Ga0395899_0057913
222 Ga0395900_0013178
223 Ga0395898_0067383
224 Ga0436364_0290522
225 Ga0436364_0839607
226 Ga0395901_0018655
227 Ga0436365_0359531
228 Ga0436360_0805841
229 Ga0436362_0890279
230 Ga0451577_0294140
231 Ga0453684_0002663
232 Ga0466960_0163715
233 Ga0451576_0178094
234 Ga0451576_0197570
235 Ga0495651_0009642
236 Ga0495651_0029032
237 Ga0495580_0000455
238 Ga0495580_0034964
239 Ga0495580_0137327
240 Ga0495662_0033623
241 Ga0495664_0002986
242 Ga0495608_0025443
243 Ga0495608_0248351
244 Ga0495628_0138937
245 Ga0495628_0351354
246 Ga0495666_0109325
247 Ga0495665_0050298
248 Ga0495665_0090920
249 Ga0495640_0197539
250 Ga0495640_0210296
251 Ga0495645_0001219
252 Ga0495645_0002242
253 Ga0495645_0146207
254 Ga0495635_0042640
255 Ga0495599_0084618
256 Ga0495623_0060632
257 Ga0495623_0194688
258 Ga0495658_0164827
259 Ga0495600_0014100
260 Ga0495674_0068032
261 Ga0495680_0093501
262 Ga0495684_0005275
263 Ga0495684_0072502
264 Ga0501031_0013322
265 Ga0501031_0077864
266 Ga0501036_0021691
267 Ga0501037_0096404
268 Ga0501040_0006920
269 Ga0501041_0046616
270 Ga0501042_0004641
271 Ga0501046_0081809
272 Ga0501047_0046134
273 Ga0501047_0090618
274 Ga0501047_0215775
275 Ga0501048_0014941
276 Ga0501067_0061897
277 Ga0501070_0253886
278 Ga0501071_0003973
279 Ga0501071_0228797
280 Ga0501072_0014251
281 Ga0501072_0263786
282 Ga0501074_0009629
283 Ga0501075_0006675
284 Ga0501076_0008316
285 Ga0501081_0125680
286 Ga0501083_0053727
287 Ga0501044_0236834
288 nmdc:mga0rr50_50859_c1
289 Ga0500642_0008073
290 Ga0501084_0135263
291 Ga0501082_0001480
292 Ga0501082_0066492
293 Ga0501082_0068828
294 2894777534

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00850

Hist_deacetyl

Histone deacetylase domain

20

304

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ji5-assembly1.cif.gz_A crystal structure of a histone deacetylase superfamily protein from burkholderia phymatumphymatum 0.9229 3 292
8szt-assembly1.cif.gz_D-2 structure of kdac1 from acinetobacter baumannii 0.9206 3 295
4cbt-assembly2.cif.gz_B design, synthesis, and biological evaluation of potent and selective class iia hdac inhibitors as a potential therapy for huntington's disease 0.9204 2 292
5g11-assembly1.cif.gz_B pseudomonas aeruginosa hdah bound to pfsaha. 0.92 1 292
6fyz-assembly2.cif.gz_B development and characterization of a cns-penetrant benzhydryl hydroxamic acid class iia histone deacetylase inhibitor 0.9198 2 294
ID Description Score Start End Superfamily
af_A0A1D6N7T5_1_214_3.40.800.20 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Histone deacetylase domain 0.9791 119 294 3.40.800.20
5ji5A00 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Histone deacetylase domain 0.9228 3 292 3.40.800.20
af_Q60DG7_22_389_3.40.800.20 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Histone deacetylase domain 0.9138 3 294 3.40.800.20
5wgmA00 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Histone deacetylase domain 0.9099 3 292 3.40.800.20
af_A0A0R0FIH2_7_382_3.40.800.20 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Histone deacetylase domain 0.9046 2 294 3.40.800.20
ID Description Score Start End GO Terms
AF-A0A832ALN7-F1-model_v4 Histone deacetylase family protein 0.9945 126 295 GO:0004407
GO:0040029
AF-A0A3B9YVB9-F1-model_v4 Acetoin utilization protein 0.9924 94 295 GO:0004407
GO:0040029
AF-A0A435AXE0-F1-model_v4 deleted 0.9905 88 295
AF-A0A6N6ZCE0-F1-model_v4 deleted 0.9901 90 295
AF-A0A527ZVN2-F1-model_v4 Histone deacetylase family protein 0.9896 147 295 GO:0004407
GO:0040029

Map