F199477

General Info

Members Datasets Scaffolds Average Seq Length
147 82 146 242

Family's Representative Sequence

Representative Sequence 3300005338|Ga0068868_100171876|Ga0068868_1001718762
Length 277
Sequence MQLDLLPHRTGGAAENMATDFLLLQRYPEASETHARFRHYDWRAPAFTFGTSQRIAYVREQLANILSSGVERVVPDALSVDLCRRPTGGGVVDHREDWTYTLVVPRGHALYDARATESYRLVHAALVESLRAQNQPVVLKQTCDSDCRSLLAGDDPDENPAPPESPASRLLRKAAPAGPTVCFTRPELYDVLNSDTGAKVAGAAQKRTKHGLLFQGSLWKPTVAATVDWDAFEADFTTRLAALLEAEAVETPWPDLNEDELSALTDQYASPEWIEHR

Samples

Sample ID Description Type Environment
1 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
7 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
8 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
9 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
10 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
11 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
12 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
13 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
14 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
15 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
16 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
20 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
23 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
24 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
25 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
26 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
27 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
28 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
29 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
30 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
31 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
32 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
33 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
34 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
35 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
36 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
37 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
38 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
39 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
40 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
41 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
42 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
43 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
44 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
45 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
46 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
47 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
48 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
49 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
50 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
51 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
52 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
53 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
54 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
55 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
56 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
57 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
58 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
59 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
60 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
61 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
62 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
63 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
64 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
65 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
66 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
69 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
73 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
76 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
77 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
78 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
79 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
80 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
82 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.32
Metatranscriptomes 0
Isolates 0.68

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 95.24
Stem 0
Stem Tuber 0
Unclassified 4.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10129654 3300003320 Bacteria 12754
2 rootH2_10256249 3300003320 Bacteria 1972
3 rootH1_10278904 3300003323 Bacteria 4600
4 rootH1_10360512 3300003323 Archaea 2063
5 Ga0070680_100813061 3300005336 Unclassified 805
6 Ga0068868_100171876 3300005338 Bacteria 1794
7 Ga0068868_100198152 3300005338 Bacteria 1673
8 Ga0068868_100233277 3300005338 Bacteria 1544
9 Ga0068867_100138754 3300005459 Bacteria 1898
10 Ga0070679_100016050 3300005530 Bacteria 7214
11 Ga0070684_100865499 3300005535 Bacteria 846
12 Ga0068857_100003034 3300005577 Bacteria 13885
13 Ga0068856_100000846 3300005614 Bacteria 32975
14 Ga0070717_10000231 3300006028 Bacteria 38509
15 Ga0097621_100001673 3300006237 Bacteria 15167
16 Ga0068871_100006057 3300006358 Bacteria 8508
17 Ga0068865_100010603 3300006881 Bacteria 5743
18 Ga0105245_10733286 3300009098 Unclassified 1023
19 Ga0207652_10016187 3300025921 Bacteria 6084
20 Ga0207704_10076012 3300025938 Bacteria 2150
21 Ga0207689_10000211 3300025942 Bacteria 51556
22 Ga0207667_10526028 3300025949 Bacteria 1198
23 Ga0207702_10000050 3300026078 Bacteria 140110
24 Ga0207648_10157932 3300026089 Bacteria 2002
25 Ga0207674_10008109 3300026116 Bacteria 12177
26 Ga0265337_1001889 3300028556 Bacteria 9978
27 Ga0265337_1008461 3300028556 Bacteria 3741
28 Ga0265337_1036178 3300028556 Bacteria 1442
29 Ga0265326_10063422 3300028558 Bacteria 1045
30 Ga0265319_1000921 3300028563 Bacteria 18442
31 Ga0265319_1001753 3300028563 Bacteria 12484
32 Ga0265319_1002338 3300028563 Bacteria 10444
33 Ga0265319_1004063 3300028563 Bacteria 7379
34 Ga0265319_1004348 3300028563 Bacteria 7029
35 Ga0265319_1013380 3300028563 Bacteria 3265
36 Ga0265319_1029684 3300028563 Bacteria 1918
37 Ga0265319_1029708 3300028563 Bacteria 1917
38 Ga0265319_1074478 3300028563 Bacteria 1084
39 Ga0265334_10006416 3300028573 Bacteria 5070
40 Ga0265334_10007313 3300028573 Unclassified 4738
41 Ga0265334_10092082 3300028573 Unclassified 1105
42 Ga0265318_10000599 3300028577 Bacteria 25145
43 Ga0265318_10000893 3300028577 Bacteria 19459
44 Ga0265318_10003153 3300028577 Bacteria 8434
45 Ga0265318_10011483 3300028577 Bacteria 3810
46 Ga0265318_10021009 3300028577 Bacteria 2626
47 Ga0265318_10057109 3300028577 Unclassified 1459
48 Ga0265323_10000871 3300028653 Bacteria 16013
49 Ga0265323_10015084 3300028653 Bacteria 3043
50 Ga0265323_10018627 3300028653 Bacteria 2685
51 Ga0265323_10037718 3300028653 Bacteria 1769
52 Ga0265322_10038932 3300028654 Bacteria 1352
53 Ga0265336_10010721 3300028666 Bacteria 3133
54 Ga0307515_10175835 3300028794 Unclassified 2112
55 Ga0265338_10000098 3300028800 Bacteria 159918
56 Ga0265338_10004863 3300028800 Bacteria 17900
57 Ga0265338_10165913 3300028800 Bacteria 1700
58 Ga0265324_10004731 3300029957 Bacteria 6037
59 Ga0265324_10129716 3300029957 Bacteria 856
60 Ga0265330_10019670 3300031235 Bacteria 3091
61 Ga0265332_10026823 3300031238 Bacteria 2525
62 Ga0265328_10028621 3300031239 Bacteria 2084
63 Ga0265328_10033946 3300031239 Bacteria 1890
64 Ga0265320_10000459 3300031240 Bacteria 32009
65 Ga0265320_10001884 3300031240 Bacteria 14806
66 Ga0265320_10004479 3300031240 Bacteria 9155
67 Ga0265320_10005130 3300031240 Bacteria 8457
68 Ga0265320_10039252 3300031240 Bacteria 2369
69 Ga0265320_10102493 3300031240 Bacteria 1317
70 Ga0265325_10004879 3300031241 Bacteria 8380
71 Ga0265329_10059005 3300031242 Bacteria 1215
72 Ga0265340_10032590 3300031247 Bacteria 2600
73 Ga0265339_10017836 3300031249 Unclassified 4196
74 Ga0265339_10091667 3300031249 Bacteria 1592
75 Ga0265339_10201074 3300031249 Bacteria 983
76 Ga0265331_10139411 3300031250 Bacteria 1104
77 Ga0265327_10000061 3300031251 Bacteria 234364
78 Ga0265327_10000066 3300031251 Bacteria 221705
79 Ga0265327_10012386 3300031251 Bacteria 5760
80 Ga0265316_10004080 3300031344 Bacteria 14612
81 Ga0265316_10006576 3300031344 Bacteria 11090
82 Ga0265316_10163095 3300031344 Bacteria 1666
83 Ga0265316_10173323 3300031344 Unclassified 1608
84 Ga0265316_10178624 3300031344 Bacteria 1581
85 Ga0307408_100000011 3300031548 Bacteria 414737
86 Ga0265313_10001629 3300031595 Bacteria 20838
87 Ga0265313_10002122 3300031595 Bacteria 17647
88 Ga0265313_10013818 3300031595 Bacteria 4813
89 Ga0265313_10017247 3300031595 Bacteria 4111
90 Ga0307508_10000091 3300031616 Bacteria 105896
91 Ga0265314_10009213 3300031711 Bacteria 8362
92 Ga0265314_10012427 3300031711 Bacteria 6946
93 Ga0265314_10049799 3300031711 Bacteria 2930
94 Ga0265314_10065131 3300031711 Bacteria 2463
95 Ga0265314_10120453 3300031711 Archaea 1653
96 Ga0265314_10159735 3300031711 Bacteria 1373
97 Ga0265342_10003294 3300031712 Bacteria 13359
98 Ga0265342_10003938 3300031712 Bacteria 11922
99 Ga0265342_10062511 3300031712 Bacteria 2191
100 Ga0265342_10112348 3300031712 Bacteria 1541
101 Ga0307407_10003369 3300031903 Bacteria 6540
102 Ga0307412_10125087 3300031911 Bacteria 1858
103 Ga0307416_100000035 3300032002 Bacteria 144188
104 Ga0307411_10042202 3300032005 Bacteria 2908
105 Ga0373934_0249284 3300035086 Unclassified 734
106 Ga0373951_0003272 3300035091 Bacteria 3959
107 Ga0373942_0102353 3300035207 Bacteria 877
108 Ga0373935_0030438 3300035692 Bacteria 3346
109 Ga0373933_0060082 3300035724 Bacteria 2291
110 Ga0395905_0000026 3300037471 Bacteria 315051
111 Ga0451577_0000017 3300042876 Bacteria 523453
112 Ga0451577_0451354 3300042876 Bacteria 1168
113 Ga0466966_0010870 3300044684 Bacteria 6046
114 Ga0453684_0000019 3300044712 Bacteria 908702
115 Ga0453684_0002340 3300044712 Bacteria 46360
116 Ga0453684_0018421 3300044712 Bacteria 10717
117 Ga0466971_0179097 3300044719 Bacteria 996
118 Ga0451576_0000052 3300045051 Bacteria 310414
119 Ga0451576_0000548 3300045051 Bacteria 80649
120 Ga0451576_0000985 3300045051 Bacteria 52711
121 Ga0451576_0138539 3300045051 Bacteria 2538
122 Ga0451576_0160728 3300045051 Bacteria 2344
123 Ga0495611_0083785 3300046648 Bacteria 1469
124 Ga0501031_0042757 3300049568 Bacteria 2957
125 Ga0501032_0000961 3300049569 Bacteria 23289
126 Ga0501032_0528964 3300049569 Bacteria 752
127 Ga0501033_0004746 3300049570 Bacteria 10874
128 Ga0501036_0041853 3300049572 Bacteria 3876
129 Ga0501038_0004516 3300049574 Bacteria 12950
130 Ga0501039_0017017 3300049575 Bacteria 5573
131 Ga0501042_0011583 3300049578 Bacteria 5955
132 Ga0501046_0049420 3300049580 Bacteria 3326
133 Ga0501047_0004855 3300049581 Bacteria 12630
134 Ga0501047_0235037 3300049581 Bacteria 1685
135 Ga0501068_0077289 3300049584 Bacteria 2038
136 Ga0501070_0037861 3300049586 Bacteria 4025
137 Ga0501070_0154197 3300049586 Bacteria 1895
138 Ga0501080_0335443 3300049742 Unclassified 1367
139 Ga0501083_0007204 3300049744 Bacteria 7898
140 Ga0501083_0094014 3300049744 Bacteria 1979
141 Ga0501035_0004518 3300049822 Bacteria 13205
142 Ga0501035_0008728 3300049822 Bacteria 9437
143 Ga0501044_0001526 3300049823 Bacteria 27149
144 Ga0501044_0051115 3300049823 Bacteria 4262
145 Ga0501045_0072904 3300049824 Bacteria 2528
146 Ga0501082_0183349 3300060353 Bacteria 1821

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049569 Ga0501032_0528964 Ga0501032_0528964_78_731 217
2 3300035086 Ga0373934_0249284 Ga0373934_0249284_27_683 218
3 3300049586 Ga0501070_0154197 Ga0501070_0154197_880_1545 220
4 3300045051 Ga0451576_0160728 Ga0451576_0160728_34_705 223
5 3300044684 Ga0466966_0010870 Ga0466966_0010870_5341_6021 226
6 3300028794 Ga0307515_10175835 Ga0307515_101758353 231
7 3300044712 Ga0453684_0002340 Ga0453684_0002340_7924_8622 232
8 3300028558 Ga0265326_10063422 Ga0265326_100634221 233
9 3300028563 Ga0265319_1004063 Ga0265319_10040633 233
10 3300028563 Ga0265319_1029684 Ga0265319_10296842 233
11 3300028577 Ga0265318_10003153 Ga0265318_100031537 233
12 3300028577 Ga0265318_10057109 Ga0265318_100571091 233
13 3300028654 Ga0265322_10038932 Ga0265322_100389323 233
14 3300031250 Ga0265331_10139411 Ga0265331_101394112 233
15 3300031251 Ga0265327_10012386 Ga0265327_100123866 233
16 3300031344 Ga0265316_10006576 Ga0265316_100065762 233
17 3300031344 Ga0265316_10163095 Ga0265316_101630952 233
18 3300031711 Ga0265314_10009213 Ga0265314_100092133 233
19 3300031711 Ga0265314_10049799 Ga0265314_100497992 233
20 3300049580 Ga0501046_0049420 Ga0501046_0049420_1562_2263 233
21 3300049581 Ga0501047_0004855 Ga0501047_0004855_9442_10143 233
22 3300049822 Ga0501035_0008728 Ga0501035_0008728_3339_4040 233
23 3300025949 Ga0207667_10526028 Ga0207667_105260282 234
24 3300028563 Ga0265319_1002338 Ga0265319_10023382 234
25 3300031240 Ga0265320_10001884 Ga0265320_100018846 234
26 3300031251 Ga0265327_10000061 Ga0265327_10000061119 234
27 3300035692 Ga0373935_0030438 Ga0373935_0030438_1008_1712 234
28 3300035724 Ga0373933_0060082 Ga0373933_0060082_1354_2058 234
29 iso_pu_bacteria 2786546940 2788436217 234
30 3300005530 Ga0070679_100016050 Ga0070679_1000160506 235
31 3300005535 Ga0070684_100865499 Ga0070684_1008654991 235
32 3300025921 Ga0207652_10016187 Ga0207652_100161875 235
33 3300028573 Ga0265334_10006416 Ga0265334_100064163 235
34 3300028800 Ga0265338_10004863 Ga0265338_100048634 235
35 3300031711 Ga0265314_10012427 Ga0265314_100124272 235
36 3300031711 Ga0265314_10159735 Ga0265314_101597352 235
37 3300044712 Ga0453684_0000019 Ga0453684_0000019_522774_523526 235
38 3300045051 Ga0451576_0000548 Ga0451576_0000548_22282_22989 235
39 3300028556 Ga0265337_1036178 Ga0265337_10361782 236
40 3300028563 Ga0265319_1013380 Ga0265319_10133802 236
41 3300028577 Ga0265318_10021009 Ga0265318_100210092 236
42 3300028666 Ga0265336_10010721 Ga0265336_100107213 236
43 3300031240 Ga0265320_10039252 Ga0265320_100392523 236
44 3300031242 Ga0265329_10059005 Ga0265329_100590052 236
45 3300031595 Ga0265313_10017247 Ga0265313_100172474 236
46 3300031711 Ga0265314_10065131 Ga0265314_100651313 236
47 3300045051 Ga0451576_0000052 Ga0451576_0000052_277203_277913 236
48 3300045051 Ga0451576_0000985 Ga0451576_0000985_9567_10277 236
49 3300003323 rootH1_10360512 rootH1_103605122 237
50 3300006028 Ga0070717_10000231 Ga0070717_100002314 237
51 3300028563 Ga0265319_1029708 Ga0265319_10297082 237
52 3300031595 Ga0265313_10013818 Ga0265313_100138186 237
53 3300031616 Ga0307508_10000091 Ga0307508_100000916 237
54 3300035207 Ga0373942_0102353 Ga0373942_0102353_58_807 237
55 3300042876 Ga0451577_0451354 Ga0451577_0451354_14_742 237
56 3300049581 Ga0501047_0235037 Ga0501047_0235037_785_1501 237
57 3300049742 Ga0501080_0335443 Ga0501080_0335443_60_776 237
58 3300049744 Ga0501083_0007204 Ga0501083_0007204_6491_7204 237
59 3300049744 Ga0501083_0094014 Ga0501083_0094014_686_1399 237
60 3300049823 Ga0501044_0001526 Ga0501044_0001526_12729_13445 237
61 3300005336 Ga0070680_100813061 Ga0070680_1008130611 238
62 3300028563 Ga0265319_1000921 Ga0265319_10009215 238
63 3300028577 Ga0265318_10000599 Ga0265318_100005996 238
64 3300029957 Ga0265324_10129716 Ga0265324_101297161 238
65 3300031240 Ga0265320_10004479 Ga0265320_100044793 238
66 3300031251 Ga0265327_10000066 Ga0265327_1000006661 238
67 3300042876 Ga0451577_0000017 Ga0451577_0000017_121520_122236 238
68 3300028556 Ga0265337_1001889 Ga0265337_10018897 239
69 3300028556 Ga0265337_1008461 Ga0265337_10084612 239
70 3300028563 Ga0265319_1001753 Ga0265319_100175310 239
71 3300028563 Ga0265319_1004348 Ga0265319_10043487 239
72 3300028563 Ga0265319_1074478 Ga0265319_10744782 239
73 3300028573 Ga0265334_10007313 Ga0265334_100073132 239
74 3300028577 Ga0265318_10000893 Ga0265318_1000089316 239
75 3300028577 Ga0265318_10011483 Ga0265318_100114835 239
76 3300028800 Ga0265338_10000098 Ga0265338_1000009841 239
77 3300028800 Ga0265338_10165913 Ga0265338_101659132 239
78 3300029957 Ga0265324_10004731 Ga0265324_100047313 239
79 3300031238 Ga0265332_10026823 Ga0265332_100268233 239
80 3300031239 Ga0265328_10028621 Ga0265328_100286213 239
81 3300031239 Ga0265328_10033946 Ga0265328_100339462 239
82 3300031240 Ga0265320_10000459 Ga0265320_1000045925 239
83 3300031240 Ga0265320_10005130 Ga0265320_100051305 239
84 3300031241 Ga0265325_10004879 Ga0265325_1000487910 239
85 3300031247 Ga0265340_10032590 Ga0265340_100325905 239
86 3300031249 Ga0265339_10017836 Ga0265339_100178365 239
87 3300031249 Ga0265339_10091667 Ga0265339_100916672 239
88 3300031249 Ga0265339_10201074 Ga0265339_102010741 239
89 3300031344 Ga0265316_10173323 Ga0265316_101733233 239
90 3300031344 Ga0265316_10178624 Ga0265316_101786243 239
91 3300031548 Ga0307408_100000011 Ga0307408_10000001126 239
92 3300031595 Ga0265313_10001629 Ga0265313_1000162917 239
93 3300031595 Ga0265313_10002122 Ga0265313_100021226 239
94 3300031711 Ga0265314_10120453 Ga0265314_101204532 239
95 3300031712 Ga0265342_10003938 Ga0265342_100039387 239
96 3300031712 Ga0265342_10062511 Ga0265342_100625112 239
97 3300031903 Ga0307407_10003369 Ga0307407_100033696 239
98 3300031911 Ga0307412_10125087 Ga0307412_101250873 239
99 3300032002 Ga0307416_100000035 Ga0307416_10000003513 239
100 3300032005 Ga0307411_10042202 Ga0307411_100422022 239
101 3300046648 Ga0495611_0083785 Ga0495611_0083785_511_1233 239
102 3300028653 Ga0265323_10000871 Ga0265323_1000087110 240
103 3300028653 Ga0265323_10018627 Ga0265323_100186272 240
104 3300028653 Ga0265323_10037718 Ga0265323_100377182 240
105 3300031344 Ga0265316_10004080 Ga0265316_1000408010 240
106 3300031712 Ga0265342_10003294 Ga0265342_1000329411 240
107 3300031712 Ga0265342_10112348 Ga0265342_101123482 240
108 3300035091 Ga0373951_0003272 Ga0373951_0003272_998_1720 240
109 3300044712 Ga0453684_0018421 Ga0453684_0018421_3670_4392 240
110 3300045051 Ga0451576_0138539 Ga0451576_0138539_1390_2112 240
111 3300009098 Ga0105245_10733286 Ga0105245_107332862 241
112 3300028573 Ga0265334_10092082 Ga0265334_100920822 241
113 3300028653 Ga0265323_10015084 Ga0265323_100150842 241
114 3300031235 Ga0265330_10019670 Ga0265330_100196703 241
115 3300031240 Ga0265320_10102493 Ga0265320_101024932 241
116 3300037471 Ga0395905_0000026 Ga0395905_0000026_119506_120243 241
117 3300049568 Ga0501031_0042757 Ga0501031_0042757_1976_2746 241
118 3300049569 Ga0501032_0000961 Ga0501032_0000961_2844_3614 241
119 3300049570 Ga0501033_0004746 Ga0501033_0004746_5289_6059 241
120 3300049572 Ga0501036_0041853 Ga0501036_0041853_597_1367 241
121 3300049574 Ga0501038_0004516 Ga0501038_0004516_5922_6692 241
122 3300049575 Ga0501039_0017017 Ga0501039_0017017_139_909 241
123 3300049578 Ga0501042_0011583 Ga0501042_0011583_3313_4083 241
124 3300049584 Ga0501068_0077289 Ga0501068_0077289_1170_1940 241
125 3300049586 Ga0501070_0037861 Ga0501070_0037861_724_1494 241
126 3300049822 Ga0501035_0004518 Ga0501035_0004518_3838_4608 241
127 3300049823 Ga0501044_0051115 Ga0501044_0051115_812_1582 241
128 3300049824 Ga0501045_0072904 Ga0501045_0072904_1072_1842 241
129 3300060353 Ga0501082_0183349 Ga0501082_0183349_790_1560 241
130 3300003320 rootH2_10129654 rootH2_101296549 242
131 3300003320 rootH2_10256249 rootH2_102562492 242
132 3300003323 rootH1_10278904 rootH1_102789045 242
133 3300005338 Ga0068868_100171876 Ga0068868_1001718762 242
134 3300005338 Ga0068868_100198152 Ga0068868_1001981522 242
135 3300005338 Ga0068868_100233277 Ga0068868_1002332771 242
136 3300005459 Ga0068867_100138754 Ga0068867_1001387541 242
137 3300005577 Ga0068857_100003034 Ga0068857_1000030348 242
138 3300005614 Ga0068856_100000846 Ga0068856_1000008467 242
139 3300006237 Ga0097621_100001673 Ga0097621_1000016733 242
140 3300006358 Ga0068871_100006057 Ga0068871_1000060574 242
141 3300006881 Ga0068865_100010603 Ga0068865_1000106037 242
142 3300025938 Ga0207704_10076012 Ga0207704_100760122 242
143 3300025942 Ga0207689_10000211 Ga0207689_1000021137 242
144 3300026078 Ga0207702_10000050 Ga0207702_1000005054 242
145 3300026089 Ga0207648_10157932 Ga0207648_101579322 242
146 3300026116 Ga0207674_10008109 Ga0207674_100081094 242
147 3300044719 Ga0466971_0179097 Ga0466971_0179097_209_940 242

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03099

BPL_LplA_LipB

Biotin/lipoate A/B protein ligase family

60

219

0.85

PF21948

LplA-B_cat

Lipoyl protein ligase A/B catalytic domain

12

223

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
2c7i-assembly3.cif.gz_C structure of protein ta0514, putative lipoate protein ligase from t. acidophilum. 0.7274 1 242
2c7i-assembly3.cif.gz_C structure of protein ta0514, putative lipoate protein ligase from t. acidophilum. 0.7246 1 242
2c8m-assembly4.cif.gz_D structure of protein ta0514, putative lipoate protein ligase from t. acidophilum with bound lipoic acid 0.7155 2 239
2c8m-assembly3.cif.gz_C structure of protein ta0514, putative lipoate protein ligase from t. acidophilum with bound lipoic acid 0.7076 1 242
2c8m-assembly3.cif.gz_C structure of protein ta0514, putative lipoate protein ligase from t. acidophilum with bound lipoic acid 0.7049 1 242
ID Description Score Start End Superfamily
af_Q2FY37_5_276_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.7442 6 239 3.30.930.10
af_Q2FY37_5_276_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.7183 6 239 3.30.930.10
af_Q9SXP7_6_215_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.7026 3 209 3.30.930.10
af_Q54L19_25_179_2.50.20.30 Mainly Beta;Clam;outer membrane lipoprotein receptor (LolB), chain A; 0.6979 155 193 2.50.20.30
af_Q9SXP7_6_215_3.30.930.10 Alpha Beta;2-Layer Sandwich;BirA Bifunctional Protein; domain 2;Bira Bifunctional Protein; Domain 2 0.6906 3 209 3.30.930.10
ID Description Score Start End GO Terms
AF-A0A1J5SVT2-F1-model_v4 Octanoyltransferase LipM (EC 2.3.1.181) 0.9723 1 242 GO:0033819
GO:0036211
AF-A0A1J5SVT2-F1-model_v4 Octanoyltransferase LipM (EC 2.3.1.181) 0.9682 1 242 GO:0033819
GO:0036211
AF-A0A2Z4AHX1-F1-model_v4 Octanoyltransferase LipM (EC 2.3.1.181) 0.9665 2 242 GO:0033819
GO:0036211
AF-A0A1Z9IMQ0-F1-model_v4 deleted 0.9644 2 242
AF-A0A7X1B9W2-F1-model_v4 BPL/LPL catalytic domain-containing protein 0.9617 2 242 GO:0036211

Feature Viewer

pLDDT pTM Quality
90.25 0.88 High
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Predicted Structure (AlphaFold2)

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