F198373

General Info

Members Datasets Scaffolds Average Seq Length
146 118 292 137

Family's Representative Sequence

Representative Sequence 3300045051|Ga0451576_0820564|Ga0451576_0820564_426_863
Length 145
Sequence MLAILRGMAEERFHFHVHGERLAIARLDAAAPVPAWARGDFVTVSRTPDELSVVCAERHVPAAGPAAPQAVERGKVALGIEGTVPMTTVGVLAALCAALAKARVSVFAISTYDTDWLLVSADRLQDARAALESLGHRVSGELPAA

Samples

Sample ID Description Type Environment
1 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
2 3300000549 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJQ_Illumina_Assembled Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
22 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
26 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
27 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
28 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
34 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
39 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
58 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
60 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
61 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
62 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
63 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
64 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
65 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
66 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
67 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
68 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
69 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
70 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
71 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
72 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
73 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
74 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
75 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
76 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
77 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
78 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
79 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
80 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
81 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
82 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
83 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
84 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
85 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
86 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
87 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
97 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
98 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
99 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
100 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
101 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
102 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
103 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
104 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
105 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
106 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
107 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
108 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
109 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
110 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
111 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
112 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
113 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
114 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
115 2643221561 Nocardioides sp. Root151 Isolate Unclassified
116 2643221696 Nocardioides sp. Root140 Isolate Unclassified
117 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
118 2917736166 Amycolatopsis dendrobii DR6-1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.58
Metatranscriptomes 0.68
Isolates 2.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.33
Nodule 0
Rhizoplane 2.74
Rhizosphere 80.14
Stem 0
Stem Tuber 0
Unclassified 3.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0451576_0820564 3300045051 Bacteria 976
2 LJQas_1007954 3300000549 Bacteria 1298
3 LJQas_1015278 3300000549 Bacteria 899
4 Ga0070683_100963040 3300005329 Bacteria 819
5 Ga0068868_100001426 3300005338 Bacteria 16483
6 Ga0070689_100024785 3300005340 Bacteria 4503
7 Ga0070687_100934229 3300005343 Bacteria 624
8 Ga0070692_11215126 3300005345 Bacteria 537
9 Ga0070659_100106706 3300005366 Bacteria 2258
10 Ga0070667_100037890 3300005367 Bacteria 4043
11 Ga0070709_11761836 3300005434 Bacteria 506
12 Ga0070700_100074062 3300005441 Bacteria 2181
13 Ga0070708_100058648 3300005445 Bacteria 3430
14 Ga0070707_100860850 3300005468 Unclassified 871
15 Ga0070699_100009625 3300005518 Bacteria 8368
16 Ga0070697_101728946 3300005536 Unclassified 560
17 Ga0068853_101112260 3300005539 Bacteria 762
18 Ga0070672_100000028 3300005543 Bacteria 64492
19 Ga0070664_100511827 3300005564 Bacteria 1107
20 Ga0070702_100008905 3300005615 Unclassified 4885
21 Ga0070702_100484470 3300005615 Bacteria 905
22 Ga0068852_100323815 3300005616 Bacteria 1498
23 Ga0068861_102450059 3300005719 Bacteria 525
24 Ga0068870_10594367 3300005840 Bacteria 751
25 Ga0068858_100001504 3300005842 Bacteria 23980
26 Ga0075365_10061044 3300006038 Bacteria 2516
27 Ga0075365_10141446 3300006038 Bacteria 1670
28 Ga0075365_10924127 3300006038 Bacteria 615
29 Ga0075363_100037632 3300006048 Bacteria 2542
30 Ga0075363_100062610 3300006048 Bacteria 2006
31 Ga0075364_10230173 3300006051 Bacteria 1259
32 Ga0075364_10342072 3300006051 Bacteria 1019
33 Ga0075367_10031633 3300006178 Bacteria 3039
34 Ga0075433_10475357 3300006852 Bacteria 1101
35 Ga0075434_100286485 3300006871 Bacteria 1667
36 Ga0068865_100363138 3300006881 Bacteria 1176
37 Ga0105245_10011088 3300009098 Bacteria 7846
38 Ga0105245_11947278 3300009098 Bacteria 641
39 Ga0105243_10218436 3300009148 Bacteria 1683
40 Ga0105242_11072056 3300009176 Bacteria 818
41 Ga0105242_12323352 3300009176 Bacteria 583
42 Ga0105248_11986477 3300009177 Bacteria 661
43 Ga0105238_11626322 3300009551 Bacteria 676
44 Ga0105239_12020149 3300010375 Bacteria 669
45 Ga0157369_10793032 3300013105 Bacteria 973
46 Ga0157378_10554121 3300013297 Bacteria 1155
47 Ga0206353_10328042 3300020082 Bacteria 1601
48 Ga0207643_10332308 3300025908 Bacteria 951
49 Ga0207657_10352930 3300025919 Bacteria 1160
50 Ga0207687_10000917 3300025927 Bacteria 20039
51 Ga0207690_10269261 3300025932 Bacteria 1323
52 Ga0207686_11168204 3300025934 Bacteria 629
53 Ga0207670_10032025 3300025936 Bacteria 3377
54 Ga0207691_10003766 3300025940 Bacteria 14728
55 Ga0207691_10989754 3300025940 Bacteria 702
56 Ga0207711_11338129 3300025941 Bacteria 659
57 Ga0207679_10193060 3300025945 Bacteria 1695
58 Ga0207667_10157317 3300025949 Bacteria 2338
59 Ga0207658_10208222 3300025986 Bacteria 1637
60 Ga0207658_11370170 3300025986 Unclassified 647
61 Ga0207677_10000007 3300026023 Bacteria 274553
62 Ga0207703_10000660 3300026035 Bacteria 34515
63 Ga0207639_11010205 3300026041 Bacteria 779
64 Ga0207678_10054792 3300026067 Bacteria 3435
65 Ga0207708_10072156 3300026075 Bacteria 2645
66 Ga0207675_101745859 3300026118 Bacteria 642
67 Ga0209813_10000804 3300027866 Bacteria 7117
68 Ga0268264_10001453 3300028381 Bacteria 22147
69 Ga0268264_10872880 3300028381 Bacteria 902
70 Ga0265330_10006747 3300031235 Bacteria 5659
71 Ga0265332_10000179 3300031238 Bacteria 52359
72 Ga0265325_10144269 3300031241 Bacteria 1130
73 Ga0265329_10008733 3300031242 Bacteria 3823
74 Ga0265331_10000649 3300031250 Bacteria 30112
75 Ga0265327_10006526 3300031251 Bacteria 9288
76 Ga0265316_10032913 3300031344 Bacteria 4228
77 Ga0265314_10024754 3300031711 Bacteria 4543
78 Ga0307413_10237642 3300031824 Bacteria 1343
79 Ga0307410_10822437 3300031852 Bacteria 791
80 Ga0307406_10202921 3300031901 Bacteria 1461
81 Ga0307407_10209588 3300031903 Bacteria 1311
82 Ga0307407_10489480 3300031903 Bacteria 900
83 Ga0307407_10973609 3300031903 Bacteria 654
84 Ga0307412_10368422 3300031911 Bacteria 1159
85 Ga0307412_10512012 3300031911 Bacteria 1001
86 Ga0307412_10718287 3300031911 Bacteria 859
87 Ga0307409_100015002 3300031995 Bacteria 5066
88 Ga0307409_100182688 3300031995 Bacteria 1858
89 Ga0307409_100803178 3300031995 Bacteria 948
90 Ga0307416_100037561 3300032002 Bacteria 3728
91 Ga0307411_10316041 3300032005 Bacteria 1259
92 Ga0307411_11072488 3300032005 Bacteria 725
93 Ga0307415_100001865 3300032126 Bacteria 10337
94 Ga0373937_0331747 3300036401 Bacteria 1440
95 Ga0395901_0419365 3300038443 Bacteria 1373
96 Ga0451851_0660854 3300041507 Bacteria 516
97 Ga0451855_0185994 3300041511 Bacteria 721
98 Ga0451853_2100977 3300041512 Bacteria 571
99 Ga0439448_0294917 3300042005 Unclassified 575
100 Ga0439464_0012262 3300042439 Bacteria 2280
101 Ga0495635_0214135 3300046663 Bacteria 1304
102 Ga0496101_0244811 3300048904 Bacteria 1396
103 Ga0496101_0520832 3300048904 Bacteria 940
104 Ga0496105_0401492 3300048908 Bacteria 1088
105 Ga0496110_0251337 3300048913 Bacteria 1609
106 Ga0501031_0031312 3300049568 Bacteria 3470
107 Ga0501031_0233227 3300049568 Bacteria 1197
108 Ga0501032_0414155 3300049569 Bacteria 865
109 Ga0501033_0594111 3300049570 Bacteria 760
110 Ga0501036_0473708 3300049572 Bacteria 1043
111 Ga0501036_1186218 3300049572 Bacteria 622
112 Ga0501040_0879492 3300049576 Bacteria 649
113 Ga0501041_0076459 3300049577 Bacteria 2060
114 Ga0501041_0142855 3300049577 Bacteria 1493
115 Ga0501041_0227167 3300049577 Bacteria 1172
116 Ga0501043_0184517 3300049579 Bacteria 1625
117 Ga0501046_0834361 3300049580 Bacteria 645
118 Ga0501048_0330821 3300049582 Bacteria 1085
119 Ga0501067_0144104 3300049583 Bacteria 1327
120 Ga0501068_0691784 3300049584 Bacteria 667
121 Ga0501069_0047404 3300049585 Bacteria 2385
122 Ga0501071_0287680 3300049587 Bacteria 1244
123 Ga0501072_1029992 3300049588 Bacteria 641
124 Ga0501073_0908795 3300049589 Bacteria 606
125 Ga0501074_0163943 3300049590 Bacteria 1587
126 Ga0501076_1468272 3300049592 Bacteria 560
127 Ga0501045_0190205 3300049824 Bacteria 1530
128 nmdc:mga03n38_1302_c1 3300050490 Bacteria 7042
129 nmdc:mga03n38_68885_c1 3300050490 Bacteria 1632
130 nmdc:mga00v17_300411_c1 3300050491 Bacteria 1043
131 nmdc:mga0yw44_217401_c1 3300050492 Bacteria 1266
132 nmdc:mga0yw44_66895_c1 3300050492 Bacteria 2219
133 nmdc:mga0yw44_679464_c1 3300050492 Bacteria 700
134 nmdc:mga06z11_10804_c1 3300050494 Bacteria 3907
135 nmdc:mga04h51_2416_c1 3300050495 Bacteria 4429
136 nmdc:mga0rr50_388725_c1 3300050513 Bacteria 1177
137 Ga0500573_0430705 3300053140 Bacteria 616
138 Ga0501084_0688790 3300054114 Bacteria 862
139 Ga0501084_0823317 3300054114 Bacteria 782
140 Ga0501082_1445005 3300060353 Bacteria 601
141 Ga0530510_0341316 3300061734 Bacteria 1124
142 Ga0530510_0375661 3300061734 Bacteria 1070
143 2643823589 2643221561 Bacteria 4984412
144 2644535270 2643221696 Bacteria 5431823
145 2857485719 2857481737 Bacteria 4761446
146 2917744771 2917736166 Bacteria 9690793
147 Ga0451576_0820564
148 LJQas_1007954
149 LJQas_1015278
150 Ga0070683_100963040
151 Ga0068868_100001426
152 Ga0070689_100024785
153 Ga0070687_100934229
154 Ga0070692_11215126
155 Ga0070659_100106706
156 Ga0070667_100037890
157 Ga0070709_11761836
158 Ga0070700_100074062
159 Ga0070708_100058648
160 Ga0070707_100860850
161 Ga0070699_100009625
162 Ga0070697_101728946
163 Ga0068853_101112260
164 Ga0070672_100000028
165 Ga0070664_100511827
166 Ga0070702_100008905
167 Ga0070702_100484470
168 Ga0068852_100323815
169 Ga0068861_102450059
170 Ga0068870_10594367
171 Ga0068858_100001504
172 Ga0075365_10061044
173 Ga0075365_10141446
174 Ga0075365_10924127
175 Ga0075363_100037632
176 Ga0075363_100062610
177 Ga0075364_10230173
178 Ga0075364_10342072
179 Ga0075367_10031633
180 Ga0075433_10475357
181 Ga0075434_100286485
182 Ga0068865_100363138
183 Ga0105245_10011088
184 Ga0105245_11947278
185 Ga0105243_10218436
186 Ga0105242_11072056
187 Ga0105242_12323352
188 Ga0105248_11986477
189 Ga0105238_11626322
190 Ga0105239_12020149
191 Ga0157369_10793032
192 Ga0157378_10554121
193 Ga0206353_10328042
194 Ga0207643_10332308
195 Ga0207657_10352930
196 Ga0207687_10000917
197 Ga0207690_10269261
198 Ga0207686_11168204
199 Ga0207670_10032025
200 Ga0207691_10003766
201 Ga0207691_10989754
202 Ga0207711_11338129
203 Ga0207679_10193060
204 Ga0207667_10157317
205 Ga0207658_10208222
206 Ga0207658_11370170
207 Ga0207677_10000007
208 Ga0207703_10000660
209 Ga0207639_11010205
210 Ga0207678_10054792
211 Ga0207708_10072156
212 Ga0207675_101745859
213 Ga0209813_10000804
214 Ga0268264_10001453
215 Ga0268264_10872880
216 Ga0265330_10006747
217 Ga0265332_10000179
218 Ga0265325_10144269
219 Ga0265329_10008733
220 Ga0265331_10000649
221 Ga0265327_10006526
222 Ga0265316_10032913
223 Ga0265314_10024754
224 Ga0307413_10237642
225 Ga0307410_10822437
226 Ga0307406_10202921
227 Ga0307407_10209588
228 Ga0307407_10489480
229 Ga0307407_10973609
230 Ga0307412_10368422
231 Ga0307412_10512012
232 Ga0307412_10718287
233 Ga0307409_100015002
234 Ga0307409_100182688
235 Ga0307409_100803178
236 Ga0307416_100037561
237 Ga0307411_10316041
238 Ga0307411_11072488
239 Ga0307415_100001865
240 Ga0373937_0331747
241 Ga0395901_0419365
242 Ga0451851_0660854
243 Ga0451855_0185994
244 Ga0451853_2100977
245 Ga0439448_0294917
246 Ga0439464_0012262
247 Ga0495635_0214135
248 Ga0496101_0244811
249 Ga0496101_0520832
250 Ga0496105_0401492
251 Ga0496110_0251337
252 Ga0501031_0031312
253 Ga0501031_0233227
254 Ga0501032_0414155
255 Ga0501033_0594111
256 Ga0501036_0473708
257 Ga0501036_1186218
258 Ga0501040_0879492
259 Ga0501041_0076459
260 Ga0501041_0142855
261 Ga0501041_0227167
262 Ga0501043_0184517
263 Ga0501046_0834361
264 Ga0501048_0330821
265 Ga0501067_0144104
266 Ga0501068_0691784
267 Ga0501069_0047404
268 Ga0501071_0287680
269 Ga0501072_1029992
270 Ga0501073_0908795
271 Ga0501074_0163943
272 Ga0501076_1468272
273 Ga0501045_0190205
274 nmdc:mga03n38_1302_c1
275 nmdc:mga03n38_68885_c1
276 nmdc:mga00v17_300411_c1
277 nmdc:mga0yw44_217401_c1
278 nmdc:mga0yw44_66895_c1
279 nmdc:mga0yw44_679464_c1
280 nmdc:mga06z11_10804_c1
281 nmdc:mga04h51_2416_c1
282 nmdc:mga0rr50_388725_c1
283 Ga0500573_0430705
284 Ga0501084_0688790
285 Ga0501084_0823317
286 Ga0501082_1445005
287 Ga0530510_0341316
288 Ga0530510_0375661
289 2643823589
290 2644535270
291 2857485719
292 2917744771

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21631

A9CJY8-like_N

A9CJY8-like, N-terminal domain

20

63

0.93

PF13840

ACT_7

ACT domain

70

133

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1zhv-assembly1.cif.gz_A x-ray crystal structure protein atu0741 from agobacterium tumefaciens. northeast structural genomics consortium target atr8. 0.8945 15 144
3lcv-assembly1.cif.gz_B crystal structure of antibiotic related methyltransferase 0.8692 91 120
1zhv-assembly1.cif.gz_A x-ray crystal structure protein atu0741 from agobacterium tumefaciens. northeast structural genomics consortium target atr8. 0.8635 15 144
8axn-assembly1.cif.gz_a inner membrane ring and secretin n0 n1 domains of the type 3 secretion system of shigella flexneri 0.8506 94 136
1zvp-assembly1.cif.gz_A crystal structure of a protein of unknown function vc0802 from vibrio cholerae, possible transport protein 0.8339 17 134
ID Description Score Start End Superfamily
1zhvA00 Alpha Beta;2-Layer Sandwich;VC0802-like;VC0802-like 0.8945 15 144 3.30.2130.10
1zhvA00 Alpha Beta;2-Layer Sandwich;VC0802-like;VC0802-like 0.8635 15 144 3.30.2130.10
2zhoB02 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;ACT domain 0.8382 88 135 3.30.70.260
1zvpB00 Alpha Beta;2-Layer Sandwich;VC0802-like;VC0802-like 0.8037 17 134 3.30.2130.10
1yj7B01 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Hypothetical protein rpa1041 0.7994 90 136 3.30.70.1530
ID Description Score Start End GO Terms
AF-A0A2V8XVE8-F1-model_v4 CASTOR ACT domain-containing protein 0.9578 75 144 GO:0004072
AF-A0A853C2E6-F1-model_v4 Aspartate kinase 0.9543 15 144
AF-A0A2D5S3K0-F1-model_v4 CASTOR ACT domain-containing protein 0.9486 76 144 GO:0004072
AF-A0A7C6UU79-F1-model_v4 ACT domain-containing protein 0.9459 63 136 GO:0004072
AF-A0A7W3IU43-F1-model_v4 Aspartate kinase 0.9402 11 144

Map