F196135

General Info

Members Datasets Scaffolds Average Seq Length
145 115 122 176

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2852677369|2852678969
Length 215
Sequence EDDLERPKVKGLHLRRPRPKPRRDARGDDSENRDHERSDAFGRGMEAFARAMGTPAFLVGLSLFVIFWVVWNSMAPIELRFDSADLGFIALTLMLSLQASYAAPMLLLAQNRQDDRDRVQIAQDRQRAERNSADLEYLAREIVALRVLTKDLASKDFIRAELRALLEDIEDLDDPDEEGSETISREEQRVSDSARRRAEAIRDRKRAAKSAEEQV

Samples

Sample ID Description Type Environment
1 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
2 2643221649 Leifsonia sp. Root4 Isolate Unclassified
3 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
4 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
5 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
6 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
7 2862993130 Planctomonas deserti 13S1-3 v2 Isolate Rhizosphere
8 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
9 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
10 2904430863 Curtobacterium oceanosedimentum 1519 Isolate Rhizosphere
11 2904501621 Curtobacterium sp. 1909 Isolate Unclassified
12 2908674828 Curtobacterium sp. 1517 Isolate Rhizosphere
13 2909074476 Curtobacterium sp. 1310 Isolate Rhizosphere
14 2919039151 Curtobacterium sp. 260 Isolate Rhizosphere
15 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
16 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
17 2928500415 Curtobacterium oceanosedimentum 1257 Isolate Rhizosphere
18 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
19 2964326757 Planctomonas psychrotolerans J5903 Isolate Rhizosphere
20 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
21 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
22 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
23 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
24 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
25 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
26 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
27 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
28 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
29 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
32 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
35 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
36 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
41 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
42 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
43 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
44 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
45 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
52 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
53 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
54 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
55 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
56 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
57 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
58 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
59 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
60 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
61 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
62 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
63 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
64 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
65 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
66 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
67 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
68 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
69 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
70 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
71 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
72 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
73 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
74 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
75 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
76 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
77 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
78 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
79 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
80 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
81 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
82 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
83 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
96 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
97 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
100 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
101 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
102 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
103 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
104 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
105 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
106 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
107 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
108 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
109 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
110 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
111 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
112 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
113 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
114 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
115 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.14
Metatranscriptomes 0
Isolates 15.86

Biome Distribution

Category Percentage (%)
Aerial Root 0.69
Bulb 0
Endosphere 22.07
Nodule 0
Rhizoplane 12.41
Rhizosphere 53.1
Stem 0
Stem Tuber 0.69
Unclassified 11.03

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10020383 3300001979 Bacteria 2314
2 JGI25165J46597_1000002 3300003214 Bacteria 765387
3 rootH1_10224022 3300003323 Bacteria 2611
4 Ga0055532_1006185 3300003758 Bacteria 1618
5 Ga0055527_1000012 3300003760 Bacteria 348744
6 Ga0055542_1000017 3300003762 Bacteria 348744
7 Ga0055529_1000023 3300003763 Bacteria 314383
8 Ga0070682_100141011 3300005337 Bacteria 1643
9 Ga0068861_101072344 3300005719 Bacteria 773
10 Ga0068862_100550125 3300005844 Bacteria 1102
11 Ga0075365_10039919 3300006038 Bacteria 3059
12 Ga0075365_10087061 3300006038 Bacteria 2123
13 Ga0075364_10421987 3300006051 Bacteria 911
14 Ga0075364_10637827 3300006051 Bacteria 728
15 Ga0075364_10655195 3300006051 Bacteria 717
16 Ga0105245_10003700 3300009098 Bacteria 13645
17 Ga0105247_10947455 3300009101 Bacteria 668
18 Ga0105243_10259534 3300009148 Bacteria 1555
19 Ga0105243_11909760 3300009148 Bacteria 627
20 Ga0105248_10006773 3300009177 Bacteria 12564
21 Ga0157371_10031739 3300013102 Bacteria 3804
22 Ga0157371_10231176 3300013102 Bacteria 1329
23 Ga0157372_10107643 3300013307 Bacteria 3190
24 Ga0207427_100034 3300025231 Bacteria 320342
25 Ga0209437_100559 3300025233 Bacteria 24640
26 Ga0209759_1055922 3300025256 Bacteria 580
27 Ga0209129_1015921 3300025258 Bacteria 1527
28 Ga0209233_1000001 3300025261 Bacteria 2992747
29 Ga0207647_10101127 3300025904 Bacteria 1710
30 Ga0207705_10164986 3300025909 Bacteria 1665
31 Ga0207687_10103643 3300025927 Bacteria 2098
32 Ga0207711_10365956 3300025941 Bacteria 1337
33 Ga0207675_100594733 3300026118 Bacteria 1109
34 Ga0268265_10861656 3300028380 Bacteria 887
35 Ga0307515_10309817 3300028794 Bacteria 1255
36 Ga0307406_10327398 3300031901 Bacteria 1188
37 Ga0307406_11255772 3300031901 Bacteria 645
38 Ga0307409_100100019 3300031995 Bacteria 2403
39 Ga0307416_100881894 3300032002 Bacteria 994
40 Ga0307416_101023474 3300032002 Bacteria 929
41 Ga0307416_102363437 3300032002 Bacteria 631
42 Ga0307414_11200383 3300032004 Bacteria 702
43 Ga0439465_0151401 3300041413 Bacteria 829
44 Ga0451789_1210551 3300041443 Bacteria 1274
45 Ga0451791_1233083 3300041451 Bacteria 1243
46 Ga0451793_0223686 3300041452 Bacteria 2374
47 Ga0451793_0946728 3300041452 Bacteria 1537
48 Ga0451793_1178446 3300041452 Bacteria 679
49 Ga0450916_007821 3300042530 Bacteria 1290
50 Ga0466972_0161927 3300044658 Bacteria 1051
51 Ga0466965_0068761 3300044683 Bacteria 1778
52 Ga0466968_0102677 3300044735 Bacteria 1278
53 Ga0466970_0131959 3300044765 Bacteria 1372
54 Ga0466960_0063062 3300044901 Bacteria 1823
55 Ga0495590_0000102 3300046457 Bacteria 51553
56 Ga0495613_0741862 3300046689 Bacteria 644
57 Ga0496100_0051185 3300048903 Bacteria 2680
58 Ga0496100_0124969 3300048903 Bacteria 1804
59 Ga0496101_0156946 3300048904 Bacteria 1743
60 Ga0496102_0031267 3300048905 Bacteria 4774
61 Ga0496103_0066356 3300048906 Bacteria 2252
62 Ga0496103_0376755 3300048906 Bacteria 912
63 Ga0496104_0112533 3300048907 Bacteria 2610
64 Ga0496105_0013209 3300048908 Bacteria 6552
65 Ga0496107_0145528 3300048910 Bacteria 1752
66 Ga0496114_0027533 3300048917 Bacteria 4657
67 Ga0496114_0130410 3300048917 Bacteria 2170
68 Ga0496115_0016782 3300048918 Bacteria 5580
69 Ga0496115_0148128 3300048918 Bacteria 1937
70 Ga0496117_0078325 3300048920 Bacteria 2182
71 Ga0496118_0018824 3300048921 Bacteria 6200
72 Ga0496120_0128914 3300048923 Bacteria 1298
73 Ga0496122_0033327 3300048925 Bacteria 4239
74 Ga0496122_0076800 3300048925 Bacteria 2349
75 Ga0496123_0035077 3300048926 Bacteria 3581
76 Ga0496123_0055507 3300048926 Bacteria 2598
77 Ga0496126_0000878 3300048929 Bacteria 52921
78 Ga0496126_0015137 3300048929 Bacteria 7769
79 Ga0496126_0019425 3300048929 Bacteria 6691
80 Ga0501031_0002312 3300049568 Bacteria 12077
81 Ga0501032_0004417 3300049569 Bacteria 10614
82 Ga0501033_0012799 3300049570 Bacteria 6397
83 Ga0501034_0001971 3300049571 Bacteria 26025
84 Ga0501036_0002578 3300049572 Bacteria 14257
85 Ga0501037_0011272 3300049573 Bacteria 6579
86 Ga0501037_0449956 3300049573 Bacteria 878
87 Ga0501038_0012010 3300049574 Bacteria 7909
88 Ga0501039_0002439 3300049575 Bacteria 13848
89 Ga0501043_0012925 3300049579 Bacteria 6525
90 Ga0501043_0480321 3300049579 Bacteria 930
91 Ga0501046_0010540 3300049580 Bacteria 7929
92 Ga0501046_0134367 3300049580 Bacteria 1874
93 Ga0501047_0056844 3300049581 Bacteria 3784
94 Ga0501047_0126730 3300049581 Bacteria 2433
95 Ga0501048_0005559 3300049582 Bacteria 9588
96 Ga0501070_0062178 3300049586 Bacteria 3093
97 Ga0501083_0111653 3300049744 Bacteria 1797
98 Ga0501035_0008427 3300049822 Bacteria 9600
99 Ga0501035_0402312 3300049822 Bacteria 1139
100 Ga0501044_0012148 3300049823 Bacteria 9326
101 Ga0501044_0093654 3300049823 Bacteria 3029
102 Ga0501045_0084462 3300049824 Bacteria 2342
103 nmdc:mga00v17_13605_c1 3300050491 Bacteria 4521
104 nmdc:mga00v17_418464_c1 3300050491 Bacteria 870
105 nmdc:mga0yw44_45698_c1 3300050492 Bacteria 2626
106 nmdc:mga0yw44_62586_c1 3300050492 Bacteria 2286
107 Ga0500635_0000472 3300053080 Bacteria 11439
108 Ga0500556_0000163 3300053104 Bacteria 54246
109 Ga0500593_010645 3300053117 Bacteria 3865
110 Ga0500655_000608 3300053133 Bacteria 7206
111 Ga0500559_0000083 3300053136 Bacteria 74324
112 Ga0500559_0014327 3300053136 Bacteria 3351
113 Ga0500559_0198643 3300053136 Bacteria 945
114 Ga0500568_0000727 3300053139 Bacteria 23611
115 Ga0500573_0075419 3300053140 Bacteria 1920
116 Ga0500588_0018865 3300053146 Bacteria 1825
117 Ga0500616_0000058 3300053153 Bacteria 266276
118 Ga0500616_0000151 3300053153 Bacteria 116796
119 Ga0500616_0051904 3300053153 Bacteria 2159
120 Ga0500645_007858 3300053730 Bacteria 3686
121 Ga0501082_0075373 3300060353 Bacteria 2907
122 Ga0466962_0322154 3300061719 Bacteria 767

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049573 Ga0501037_0449956 Ga0501037_0449956_149_667 154
2 3300049579 Ga0501043_0480321 Ga0501043_0480321_125_643 154
3 3300049580 Ga0501046_0134367 Ga0501046_0134367_876_1394 154
4 3300049581 Ga0501047_0126730 Ga0501047_0126730_236_754 154
5 3300049744 Ga0501083_0111653 Ga0501083_0111653_1193_1711 154
6 3300041452 Ga0451793_1178446 Ga0451793_1178446_121_639 166
7 iso_pu_bacteria 2928090899 2928091792 166
8 iso_pu_bacteria 2984580707 2984581448 166
9 3300041443 Ga0451789_1210551 Ga0451789_1210551_593_1114 167
10 3300041452 Ga0451793_0946728 Ga0451793_0946728_690_1211 167
11 3300044658 Ga0466972_0161927 Ga0466972_0161927_353_874 167
12 3300048925 Ga0496122_0076800 Ga0496122_0076800_1155_1724 167
13 3300053136 Ga0500559_0014327 Ga0500559_0014327_453_974 167
14 3300053136 Ga0500559_0198643 Ga0500559_0198643_367_888 167
15 3300009148 Ga0105243_10259534 Ga0105243_102595342 168
16 3300013102 Ga0157371_10231176 Ga0157371_102311762 168
17 3300049568 Ga0501031_0002312 Ga0501031_0002312_9178_9705 168
18 3300049569 Ga0501032_0004417 Ga0501032_0004417_5275_5802 168
19 3300049570 Ga0501033_0012799 Ga0501033_0012799_3744_4271 168
20 3300049571 Ga0501034_0001971 Ga0501034_0001971_12927_13454 168
21 3300049572 Ga0501036_0002578 Ga0501036_0002578_4200_4727 168
22 3300049573 Ga0501037_0011272 Ga0501037_0011272_3616_4143 168
23 3300049574 Ga0501038_0012010 Ga0501038_0012010_3744_4271 168
24 3300049575 Ga0501039_0002439 Ga0501039_0002439_9525_10052 168
25 3300049579 Ga0501043_0012925 Ga0501043_0012925_3744_4271 168
26 3300049580 Ga0501046_0010540 Ga0501046_0010540_4969_5496 168
27 3300049581 Ga0501047_0056844 Ga0501047_0056844_2438_2965 168
28 3300049582 Ga0501048_0005559 Ga0501048_0005559_3368_3895 168
29 3300049586 Ga0501070_0062178 Ga0501070_0062178_1177_1704 168
30 3300049822 Ga0501035_0008427 Ga0501035_0008427_4200_4727 168
31 3300049823 Ga0501044_0012148 Ga0501044_0012148_5305_5832 168
32 3300049824 Ga0501045_0084462 Ga0501045_0084462_972_1499 168
33 3300060353 Ga0501082_0075373 Ga0501082_0075373_1991_2518 168
34 iso_pu_bacteria 2904430863 2904430952 168
35 iso_pu_bacteria 2964326757 2964328986 168
36 3300025909 Ga0207705_10164986 Ga0207705_101649862 169
37 3300048925 Ga0496122_0033327 Ga0496122_0033327_3178_3705 169
38 3300048926 Ga0496123_0035077 Ga0496123_0035077_2901_3428 169
39 3300053153 Ga0500616_0000151 Ga0500616_0000151_106613_107131 169
40 iso_pu_bacteria 2721755702 2723641561 169
41 iso_pu_bacteria 2852677369 2852678969 169
42 iso_pu_bacteria 2870628048 2870630715 169
43 iso_pu_bacteria 2935409751 2935410984 169
44 3300025258 Ga0209129_1015921 Ga0209129_10159212 170
45 3300049822 Ga0501035_0402312 Ga0501035_0402312_494_1018 170
46 3300049823 Ga0501044_0093654 Ga0501044_0093654_459_983 170
47 3300053139 Ga0500568_0000727 Ga0500568_0000727_11791_12309 170
48 3300053153 Ga0500616_0000058 Ga0500616_0000058_229412_229999 170
49 iso_pu_bacteria 2844852863 2844855893 170
50 iso_pu_bacteria 2862993130 2862995271 170
51 iso_pu_bacteria 2884763398 2884764887 170
52 iso_pu_bacteria 2904501621 2904503528 170
53 iso_pu_bacteria 2908674828 2908675175 170
54 iso_pu_bacteria 2909074476 2909075508 170
55 iso_pu_bacteria 2919039151 2919039854 170
56 iso_pu_bacteria 2928500415 2928501196 170
57 iso_pu_bacteria 2966921586 2966921717 170
58 iso_pu_bacteria 8056037122 8056039770 170
59 iso_pu_bacteria 8057345674 8057348328 170
60 3300003323 rootH1_10224022 rootH1_102240222 171
61 3300006051 Ga0075364_10655195 Ga0075364_106551952 171
62 3300009101 Ga0105247_10947455 Ga0105247_109474552 171
63 3300031901 Ga0307406_10327398 Ga0307406_103273981 171
64 3300031901 Ga0307406_11255772 Ga0307406_112557721 171
65 3300031995 Ga0307409_100100019 Ga0307409_1001000192 171
66 3300032002 Ga0307416_100881894 Ga0307416_1008818942 171
67 3300032002 Ga0307416_101023474 Ga0307416_1010234741 171
68 3300032002 Ga0307416_102363437 Ga0307416_1023634371 171
69 3300032004 Ga0307414_11200383 Ga0307414_112003831 171
70 3300041413 Ga0439465_0151401 Ga0439465_0151401_107_628 171
71 3300046689 Ga0495613_0741862 Ga0495613_0741862_41_562 171
72 3300048903 Ga0496100_0051185 Ga0496100_0051185_1367_1891 171
73 3300048906 Ga0496103_0376755 Ga0496103_0376755_378_902 171
74 3300048917 Ga0496114_0027533 Ga0496114_0027533_1814_2338 171
75 3300048918 Ga0496115_0148128 Ga0496115_0148128_1035_1559 171
76 3300053104 Ga0500556_0000163 Ga0500556_0000163_18693_19214 171
77 3300053117 Ga0500593_010645 Ga0500593_010645_1451_1972 171
78 3300053133 Ga0500655_000608 Ga0500655_000608_681_1202 171
79 3300053730 Ga0500645_007858 Ga0500645_007858_1133_1657 171
80 iso_pu_bacteria 2585428094 2587863057 171
81 iso_pu_bacteria 2643221649 2644277422 171
82 iso_pu_bacteria 2857729791 2857730311 171
83 iso_pu_bacteria 2928121344 2928123526 171
84 3300005719 Ga0068861_101072344 Ga0068861_1010723442 172
85 3300005844 Ga0068862_100550125 Ga0068862_1005501251 172
86 3300009148 Ga0105243_11909760 Ga0105243_119097601 172
87 3300013102 Ga0157371_10031739 Ga0157371_100317394 172
88 3300026118 Ga0207675_100594733 Ga0207675_1005947332 172
89 3300028380 Ga0268265_10861656 Ga0268265_108616562 172
90 3300044683 Ga0466965_0068761 Ga0466965_0068761_383_904 172
91 3300044735 Ga0466968_0102677 Ga0466968_0102677_243_806 172
92 3300044765 Ga0466970_0131959 Ga0466970_0131959_389_910 172
93 3300044901 Ga0466960_0063062 Ga0466960_0063062_1097_1618 172
94 3300046457 Ga0495590_0000102 Ga0495590_0000102_18028_18558 172
95 3300048926 Ga0496123_0055507 Ga0496123_0055507_21_551 172
96 3300050491 nmdc:mga00v17_418464_c1 nmdc:mga00v17_418464_c1_165_695 172
97 3300006038 Ga0075365_10039919 Ga0075365_100399194 173
98 3300006038 Ga0075365_10087061 Ga0075365_100870612 173
99 3300006051 Ga0075364_10421987 Ga0075364_104219872 173
100 3300006051 Ga0075364_10637827 Ga0075364_106378271 173
101 3300025256 Ga0209759_1055922 Ga0209759_10559221 173
102 3300028794 Ga0307515_10309817 Ga0307515_103098172 173
103 3300041451 Ga0451791_1233083 Ga0451791_1233083_303_845 173
104 3300041452 Ga0451793_0223686 Ga0451793_0223686_1103_1645 173
105 3300048929 Ga0496126_0015137 Ga0496126_0015137_2299_2850 173
106 3300050491 nmdc:mga00v17_13605_c1 nmdc:mga00v17_13605_c1_226_762 173
107 3300050492 nmdc:mga0yw44_45698_c1 nmdc:mga0yw44_45698_c1_1512_2048 173
108 3300050492 nmdc:mga0yw44_62586_c1 nmdc:mga0yw44_62586_c1_1469_2005 173
109 3300053136 Ga0500559_0000083 Ga0500559_0000083_6369_6920 173
110 3300053146 Ga0500588_0018865 Ga0500588_0018865_765_1295 173
111 3300053153 Ga0500616_0051904 Ga0500616_0051904_283_819 173
112 3300001979 JGI24740J21852_10020383 JGI24740J21852_100203833 174
113 3300003214 JGI25165J46597_1000002 JGI25165J46597_1000002175 174
114 3300003758 Ga0055532_1006185 Ga0055532_10061852 174
115 3300003760 Ga0055527_1000012 Ga0055527_100001247 174
116 3300003762 Ga0055542_1000017 Ga0055542_100001747 174
117 3300003763 Ga0055529_1000023 Ga0055529_100002315 174
118 3300005337 Ga0070682_100141011 Ga0070682_1001410112 174
119 3300009098 Ga0105245_10003700 Ga0105245_100037002 174
120 3300009177 Ga0105248_10006773 Ga0105248_100067732 174
121 3300013307 Ga0157372_10107643 Ga0157372_101076433 174
122 3300025231 Ga0207427_100034 Ga0207427_100034103 174
123 3300025233 Ga0209437_100559 Ga0209437_10055918 174
124 3300025261 Ga0209233_1000001 Ga0209233_10000012630 174
125 3300025904 Ga0207647_10101127 Ga0207647_101011272 174
126 3300025927 Ga0207687_10103643 Ga0207687_101036431 174
127 3300025941 Ga0207711_10365956 Ga0207711_103659562 174
128 3300042530 Ga0450916_007821 Ga0450916_007821_710_1246 174
129 3300048903 Ga0496100_0124969 Ga0496100_0124969_983_1507 174
130 3300048904 Ga0496101_0156946 Ga0496101_0156946_116_640 174
131 3300048905 Ga0496102_0031267 Ga0496102_0031267_2578_3102 174
132 3300048906 Ga0496103_0066356 Ga0496103_0066356_362_886 174
133 3300048907 Ga0496104_0112533 Ga0496104_0112533_61_585 174
134 3300048908 Ga0496105_0013209 Ga0496105_0013209_5926_6450 174
135 3300048910 Ga0496107_0145528 Ga0496107_0145528_65_589 174
136 3300048917 Ga0496114_0130410 Ga0496114_0130410_903_1427 174
137 3300048918 Ga0496115_0016782 Ga0496115_0016782_366_890 174
138 3300048920 Ga0496117_0078325 Ga0496117_0078325_1203_1736 174
139 3300048921 Ga0496118_0018824 Ga0496118_0018824_1701_2234 174
140 3300048923 Ga0496120_0128914 Ga0496120_0128914_743_1267 174
141 3300048929 Ga0496126_0000878 Ga0496126_0000878_15848_16390 174
142 3300048929 Ga0496126_0019425 Ga0496126_0019425_2413_2937 174
143 3300053080 Ga0500635_0000472 Ga0500635_0000472_3401_3925 174
144 3300053140 Ga0500573_0075419 Ga0500573_0075419_1275_1829 174
145 3300061719 Ga0466962_0322154 Ga0466962_0322154_35_562 174

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06210

DUF1003

Protein of unknown function (DUF1003)

52

156

0.95

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pLDDT pTM Quality
66.44 0.26 Low
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Predicted Structure (AlphaFold2)

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