F195088

General Info

Members Datasets Scaffolds Average Seq Length
145 117 290 292

Family's Representative Sequence

Representative Sequence 3300031507|Ga0307509_10055623|Ga0307509_100556234
Length 331
Sequence MEAAEAMETYHAGSRAVQDRVGVREFADHVGQIIGQGIKPVAAAFLELQPLLILGAADPATGRVWASPLTGTPGFVRATGPHQISITGTTHSTDPLTPALAEARGLPVGTIALDPRTRRRMRVDGRLRRTERGLAIEAERVFSNCPKYIQRRESYDTVADREPAQPRHATELTTSQAEFIAAADTFFLATTHEHGADASHRGGNPGFVQATSPHDLTWPDYPGNAMFLSLGNLLADPRAGLLFLDWTTGTTLQLTGEARTEFDGEGERRVRFAVTEVVETPAAIPLQPRCDRRPWKGRGAVSICGSAAWARPATTARQPNNDTLRHFPRST

Samples

Sample ID Description Type Environment
1 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
5 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
6 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
7 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
8 3300015688 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_G01 Metagenome Rhizosphere
9 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
10 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
11 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
12 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
13 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
14 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
15 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
16 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
17 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
18 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
19 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
20 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
21 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
22 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
23 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
24 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
25 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
26 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
27 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
28 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
29 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
30 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
31 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
32 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
33 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
34 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
35 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
36 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
37 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
38 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
39 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
40 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
41 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
42 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
43 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
44 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
45 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
46 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
47 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
48 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
49 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
50 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
51 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
52 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
53 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
54 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
55 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
56 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
57 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
58 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
59 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
60 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
61 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
62 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
63 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
64 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
65 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
66 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
68 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
74 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
75 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
76 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
79 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
80 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
81 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
82 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
83 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
84 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
85 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
86 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
87 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
88 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
89 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
90 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
91 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
92 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
93 2643221647 Streptomyces sp. Root369 Isolate Unclassified
94 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
95 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
96 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
97 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
98 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
99 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
100 2867428634 Streptomyces sp. RP5T Isolate Unclassified
101 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
102 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
103 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
104 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
105 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
106 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
107 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
108 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
109 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
110 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
111 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
112 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
113 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
114 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
115 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
116 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
117 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 78.62
Metatranscriptomes 0.69
Isolates 20.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.52
Nodule 0
Rhizoplane 0.69
Rhizosphere 71.03
Stem 0
Stem Tuber 0
Unclassified 2.76

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307509_10055623 3300031507 Bacteria 4204
2 rootL2_10030617 3300003322 Bacteria 3010
3 Ga0006562J51391_1097179 3300003578 Bacteria 2080
4 Ga0081455_10101886 3300005937 Bacteria 2303
5 Ga0075363_100004523 3300006048 Bacteria 6095
6 Ga0075370_10182372 3300006353 Bacteria 1236
7 Ga0105248_10717525 3300009177 Bacteria 1128
8 Ga0183367_1006 3300015688 Bacteria 648044
9 Ga0307517_10006681 3300028786 Bacteria 16989
10 Ga0307517_10015968 3300028786 Bacteria 9916
11 Ga0307515_10002762 3300028794 Bacteria 37490
12 Ga0307511_10000836 3300030521 Bacteria 32726
13 Ga0307511_10103179 3300030521 Bacteria 1859
14 Ga0307511_10103508 3300030521 Bacteria 1854
15 Ga0307512_10003747 3300030522 Bacteria 17203
16 Ga0307513_10246755 3300031456 Bacteria 1585
17 Ga0307509_10070224 3300031507 Bacteria 3658
18 Ga0307509_10101791 3300031507 Bacteria 2906
19 Ga0307508_10007620 3300031616 Bacteria 10062
20 Ga0307508_10059608 3300031616 Bacteria 3375
21 Ga0307516_10031895 3300031730 Bacteria 5310
22 Ga0307518_10095710 3300031838 Bacteria 2131
23 Ga0307507_10061935 3300033179 Bacteria 3480
24 Ga0307510_10096064 3300033180 Bacteria 2781
25 Ga0307510_10141654 3300033180 Bacteria 2046
26 Ga0395900_0118156 3300037418 Bacteria 2721
27 Ga0439466_0032651 3300041411 Bacteria 1773
28 Ga0439465_0001665 3300041413 Bacteria 7260
29 Ga0439448_0023757 3300042005 Bacteria 1914
30 Ga0439455_0001026 3300042012 Bacteria 4406
31 Ga0450903_001152 3300042138 Bacteria 4995
32 Ga0439458_0003166 3300042157 Bacteria 3901
33 Ga0466969_0003329 3300044656 Bacteria 8554
34 Ga0466972_0055455 3300044658 Bacteria 1906
35 Ga0466966_0005094 3300044684 Bacteria 8636
36 Ga0466961_0040973 3300044693 Bacteria 2969
37 Ga0466961_0137807 3300044693 Bacteria 1528
38 Ga0466971_0006591 3300044719 Bacteria 5046
39 Ga0466958_0132188 3300045836 Bacteria 1568
40 Ga0466967_0107635 3300045976 Bacteria 2557
41 Ga0495592_0008236 3300046454 Bacteria 7825
42 Ga0495603_0069255 3300046455 Bacteria 2075
43 Ga0495603_0165358 3300046455 Bacteria 1282
44 Ga0495629_0014695 3300046459 Bacteria 5631
45 Ga0495629_0017838 3300046459 Bacteria 5087
46 Ga0495651_0034145 3300046462 Bacteria 3966
47 Ga0495580_0002610 3300046472 Bacteria 15654
48 Ga0495662_0003140 3300046476 Bacteria 8332
49 Ga0495662_0010986 3300046476 Bacteria 4427
50 Ga0495662_0018033 3300046476 Bacteria 3415
51 Ga0495594_0045505 3300046499 Bacteria 2409
52 Ga0495608_0000374 3300046511 Bacteria 31246
53 Ga0495618_0021148 3300046514 Unclassified 4011
54 Ga0495628_0033146 3300046516 Bacteria 4164
55 Ga0495630_0025343 3300046517 Unclassified 4384
56 Ga0495630_0056759 3300046517 Bacteria 2933
57 Ga0495666_0160402 3300046526 Bacteria 1043
58 Ga0495640_0147215 3300046533 Bacteria 1514
59 Ga0495640_0214189 3300046533 Bacteria 1217
60 Ga0495586_0051411 3300046535 Bacteria 2230
61 Ga0495645_0085034 3300046543 Bacteria 2264
62 Ga0495645_0114070 3300046543 Bacteria 1910
63 Ga0495622_0023554 3300046557 Bacteria 2872
64 Ga0495634_0039652 3300046642 Bacteria 3207
65 Ga0495634_0085277 3300046642 Bacteria 2058
66 Ga0495635_0096405 3300046663 Bacteria 2021
67 Ga0495588_0046312 3300046674 Bacteria 2231
68 Ga0495588_0274492 3300046674 Bacteria 888
69 Ga0495657_0000779 3300046675 Bacteria 28366
70 Ga0495657_0004276 3300046675 Bacteria 11408
71 Ga0495599_0070981 3300046678 Bacteria 2174
72 Ga0495613_0013841 3300046689 Bacteria 5984
73 Ga0495613_0013884 3300046689 Bacteria 5977
74 Ga0495671_0009649 3300046692 Bacteria 5384
75 Ga0495600_0006980 3300046809 Bacteria 6891
76 Ga0495604_0000995 3300047317 Bacteria 23556
77 Ga0495636_0001309 3300047318 Bacteria 9437
78 Ga0495675_0034089 3300047444 Bacteria 3249
79 Ga0495675_0039660 3300047444 Bacteria 2999
80 Ga0495675_0059422 3300047444 Bacteria 2423
81 Ga0495675_0115363 3300047444 Bacteria 1675
82 Ga0495675_0186851 3300047444 Bacteria 1266
83 Ga0495681_0001201 3300047470 Bacteria 19717
84 Ga0495681_0077490 3300047470 Bacteria 1491
85 Ga0495684_0113567 3300047471 Bacteria 2042
86 Ga0495593_0004018 3300047673 Bacteria 8769
87 Ga0495602_0014990 3300048088 Bacteria 7839
88 Ga0495614_0013409 3300048089 Bacteria 3594
89 Ga0496110_0139112 3300048913 Bacteria 2195
90 Ga0501031_0025099 3300049568 Bacteria 3887
91 Ga0501032_0123220 3300049569 Bacteria 1713
92 Ga0501034_0036018 3300049571 Bacteria 5016
93 Ga0501037_0089834 3300049573 Bacteria 2223
94 Ga0501037_0371478 3300049573 Bacteria 984
95 Ga0501038_0000997 3300049574 Bacteria 25475
96 Ga0501043_0325030 3300049579 Bacteria 1172
97 Ga0501047_0055239 3300049581 Bacteria 3840
98 Ga0501047_0072366 3300049581 Bacteria 3318
99 Ga0501070_0240185 3300049586 Bacteria 1483
100 Ga0501076_0388006 3300049592 Unclassified 1148
101 Ga0501080_0075082 3300049742 Bacteria 3145
102 Ga0501035_0088343 3300049822 Bacteria 2731
103 Ga0501044_0021560 3300049823 Bacteria 6870
104 Ga0501044_0067854 3300049823 Bacteria 3633
105 Ga0501044_0132902 3300049823 Bacteria 2481
106 Ga0501045_0210094 3300049824 Bacteria 1450
107 Ga0495619_0026314 3300053085 Bacteria 3741
108 Ga0500578_0005171 3300053086 Bacteria 8930
109 Ga0500650_0047255 3300053098 Bacteria 1995
110 Ga0500560_008085 3300053107 Bacteria 2513
111 Ga0500600_0026923 3300053149 Bacteria 3410
112 Ga0500616_0010455 3300053153 Bacteria 5552
113 Ga0500634_0087941 3300053161 Bacteria 1585
114 Ga0501084_0249753 3300054114 Unclassified 1498
115 Ga0466962_0105542 3300061719 Bacteria 1354
116 2554258550 2554235005 Bacteria 6457341
117 2585304769 2582581313 Bacteria 10042643
118 2585319313 2582581314 Bacteria 11452267
119 2644018270 2643221601 Bacteria 7493239
120 2644174307 2643221631 Bacteria 8168043
121 2644263099 2643221647 Bacteria 10741251
122 2644436435 2643221678 Bacteria 9540101
123 2786669745 2786546132 Bacteria 10419719
124 2808841320 2808606359 Bacteria 9866990
125 2808919847 2808606375 Bacteria 9466072
126 2811848309 2808606982 Bacteria 7791042
127 2862288094 2862281513 Bacteria 9621493
128 2867434734 2867428634 Bacteria 9590268
129 2877681873 2877676314 Bacteria 9512378
130 2919468717 2919468124 Bacteria 9133025
131 2954676171 2954673503 Bacteria 9685905
132 2954687997 2954682443 Bacteria 9862841
133 2954697848 2954691527 Bacteria 10720516
134 2954704368 2954701450 Bacteria 10834262
135 2954716963 2954711539 Bacteria 10867210
136 2954726914 2954721474 Bacteria 10456478
137 2954734884 2954731030 Bacteria 10243860
138 2954745835 2954740390 Bacteria 10229294
139 2954753755 2954749733 Bacteria 10366972
140 2954764808 2954759201 Bacteria 9358192
141 2995468838 2995463766 Bacteria 8577691
142 3006396727 3006393351 Bacteria 6615579
143 8008579570 8008574985 Bacteria 7815457
144 8055181310 8055172936 Bacteria 9305943
145 8056833949 8056829672 Bacteria 9045328
146 Ga0307509_10055623
147 rootL2_10030617
148 Ga0006562J51391_1097179
149 Ga0081455_10101886
150 Ga0075363_100004523
151 Ga0075370_10182372
152 Ga0105248_10717525
153 Ga0183367_1006
154 Ga0307517_10006681
155 Ga0307517_10015968
156 Ga0307515_10002762
157 Ga0307511_10000836
158 Ga0307511_10103179
159 Ga0307511_10103508
160 Ga0307512_10003747
161 Ga0307513_10246755
162 Ga0307509_10070224
163 Ga0307509_10101791
164 Ga0307508_10007620
165 Ga0307508_10059608
166 Ga0307516_10031895
167 Ga0307518_10095710
168 Ga0307507_10061935
169 Ga0307510_10096064
170 Ga0307510_10141654
171 Ga0395900_0118156
172 Ga0439466_0032651
173 Ga0439465_0001665
174 Ga0439448_0023757
175 Ga0439455_0001026
176 Ga0450903_001152
177 Ga0439458_0003166
178 Ga0466969_0003329
179 Ga0466972_0055455
180 Ga0466966_0005094
181 Ga0466961_0040973
182 Ga0466961_0137807
183 Ga0466971_0006591
184 Ga0466958_0132188
185 Ga0466967_0107635
186 Ga0495592_0008236
187 Ga0495603_0069255
188 Ga0495603_0165358
189 Ga0495629_0014695
190 Ga0495629_0017838
191 Ga0495651_0034145
192 Ga0495580_0002610
193 Ga0495662_0003140
194 Ga0495662_0010986
195 Ga0495662_0018033
196 Ga0495594_0045505
197 Ga0495608_0000374
198 Ga0495618_0021148
199 Ga0495628_0033146
200 Ga0495630_0025343
201 Ga0495630_0056759
202 Ga0495666_0160402
203 Ga0495640_0147215
204 Ga0495640_0214189
205 Ga0495586_0051411
206 Ga0495645_0085034
207 Ga0495645_0114070
208 Ga0495622_0023554
209 Ga0495634_0039652
210 Ga0495634_0085277
211 Ga0495635_0096405
212 Ga0495588_0046312
213 Ga0495588_0274492
214 Ga0495657_0000779
215 Ga0495657_0004276
216 Ga0495599_0070981
217 Ga0495613_0013841
218 Ga0495613_0013884
219 Ga0495671_0009649
220 Ga0495600_0006980
221 Ga0495604_0000995
222 Ga0495636_0001309
223 Ga0495675_0034089
224 Ga0495675_0039660
225 Ga0495675_0059422
226 Ga0495675_0115363
227 Ga0495675_0186851
228 Ga0495681_0001201
229 Ga0495681_0077490
230 Ga0495684_0113567
231 Ga0495593_0004018
232 Ga0495602_0014990
233 Ga0495614_0013409
234 Ga0496110_0139112
235 Ga0501031_0025099
236 Ga0501032_0123220
237 Ga0501034_0036018
238 Ga0501037_0089834
239 Ga0501037_0371478
240 Ga0501038_0000997
241 Ga0501043_0325030
242 Ga0501047_0055239
243 Ga0501047_0072366
244 Ga0501070_0240185
245 Ga0501076_0388006
246 Ga0501080_0075082
247 Ga0501035_0088343
248 Ga0501044_0021560
249 Ga0501044_0067854
250 Ga0501044_0132902
251 Ga0501045_0210094
252 Ga0495619_0026314
253 Ga0500578_0005171
254 Ga0500650_0047255
255 Ga0500560_008085
256 Ga0500600_0026923
257 Ga0500616_0010455
258 Ga0500634_0087941
259 Ga0501084_0249753
260 Ga0466962_0105542
261 2554258550
262 2585304769
263 2585319313
264 2644018270
265 2644174307
266 2644263099
267 2644436435
268 2786669745
269 2808841320
270 2808919847
271 2811848309
272 2862288094
273 2867434734
274 2877681873
275 2919468717
276 2954676171
277 2954687997
278 2954697848
279 2954704368
280 2954716963
281 2954726914
282 2954734884
283 2954745835
284 2954753755
285 2954764808
286 2995468838
287 3006396727
288 8008579570
289 8055181310
290 8056833949

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01243

Putative_PNPOx

Pyridoxamine 5'-phosphate oxidase

172

265

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3amf-assembly1.cif.gz_B e13r mutant of fmn-binding protein from desulfovibrio vulgaris (miyazaki f) 0.8102 165 271
3a6q-assembly1.cif.gz_B e13t mutant of fmn-binding protein from desulfovibrio vulgaris (miyazaki f) 0.8068 165 271
6h00-assembly1.cif.gz_A-2 crystal structure of human pyridoxine 5-phophate oxidase, r116q variant 0.8047 176 255
3a6r-assembly2.cif.gz_C e13q mutant of fmn-binding protein from desulfovibrio vulgaris (miyazaki f) 0.8035 165 269
3vya-assembly1.cif.gz_A-2 w32y mutant of fmn-binding protein from desulfovibrio vulgaris (miyazaki f) 0.7883 167 271
ID Description Score Start End Superfamily
6h00A00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.8047 176 255 2.30.110.10
5escD00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.7733 165 271 2.30.110.10
af_Q57730_15_149_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.7551 164 266 2.30.110.10
1wv4B00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.7528 177 266 2.30.110.10
2i51B00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.7508 177 253 2.30.110.10
ID Description Score Start End GO Terms
AF-A0A7W8BHS0-F1-model_v4 Pyridoxamine 5'-phosphate oxidase N-terminal domain-containing protein 0.9935 1 291
AF-A0A7T7KYV2-F1-model_v4 Pyridoxamine 5'-phosphate oxidase family protein 0.9902 3 291
AF-A0A3N4TIU9-F1-model_v4 deleted 0.9892 1 294
AF-A0A4R3IY91-F1-model_v4 deleted 0.9868 1 291
AF-A0A3N4TIU9-F1-model_v4 deleted 0.9858 1 294

Map