F194668

General Info

Members Datasets Scaffolds Average Seq Length
145 103 145 223

Family's Representative Sequence

Representative Sequence 3300013296|Ga0157374_10163149|Ga0157374_101631493
Length 263
Sequence VNNGQHQQTRFLIFSASLRNNSLNTQLTKLAVRTIEKNGGKVDHATMSEFDCPSFNQDLEINHFHPPGAEEFRKRILANDAFIISSPEYNGSMPGYLKNSIDWVSRFRPQPFNERHALLMSASPSMAGANRGVWSLRIPFEHLGANVFPNMFSLAVAHKAFTPEGNISDATLAKRFEDNLIAFMNLVEAAKNYPCIKKAWVEFLGETPDPAIERVEEDNMSNTLKEYCLKNFLILFASKVICGRKTSGATGNCQLNCDCVGDV

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
21 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
27 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
29 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
30 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
31 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
32 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
39 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
40 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
41 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
42 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
43 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
44 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
45 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
46 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
47 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
48 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
49 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
50 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
51 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
78 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
80 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
81 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
82 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
83 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
87 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
88 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
89 3300041501 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_7 MetaG Metagenome Unclassified
90 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
91 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
92 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
93 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
94 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
95 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
96 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
97 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
98 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
100 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
101 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
102 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
103 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.31
Metatranscriptomes 0.69
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.38
Rhizosphere 97.93
Stem 0
Stem Tuber 0
Unclassified 0.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10085718 3300005327 Unclassified 2591
2 Ga0070676_10290094 3300005328 Bacteria 1105
3 Ga0070683_100321976 3300005329 Unclassified 1471
4 Ga0070677_10009308 3300005333 Bacteria 3328
5 Ga0068869_100317652 3300005334 Bacteria 1262
6 Ga0070666_10096606 3300005335 Bacteria 2034
7 Ga0070682_100241359 3300005337 Unclassified 1297
8 Ga0068868_100012031 3300005338 Bacteria 6317
9 Ga0070660_100119647 3300005339 Bacteria 2101
10 Ga0070660_100165951 3300005339 Bacteria 1781
11 Ga0070660_100456401 3300005339 Bacteria 1060
12 Ga0070675_100060411 3300005354 Bacteria 3130
13 Ga0070674_100339853 3300005356 Unclassified 1209
14 Ga0070673_100063350 3300005364 Bacteria 2942
15 Ga0070673_100443742 3300005364 Bacteria 1166
16 Ga0070659_100125453 3300005366 Unclassified 2082
17 Ga0070659_100453818 3300005366 Bacteria 1088
18 Ga0070667_100094880 3300005367 Bacteria 2571
19 Ga0070663_100525908 3300005455 Bacteria 985
20 Ga0070662_100093142 3300005457 Unclassified 2266
21 Ga0070662_100258045 3300005457 Unclassified 1403
22 Ga0068867_100279370 3300005459 Bacteria 1369
23 Ga0068867_100403943 3300005459 Bacteria 1153
24 Ga0070679_100000364 3300005530 Bacteria 38564
25 Ga0070679_100070298 3300005530 Bacteria 3492
26 Ga0070684_100035403 3300005535 Bacteria 4273
27 Ga0068853_100288792 3300005539 Unclassified 1514
28 Ga0070693_100157823 3300005547 Unclassified 1442
29 Ga0068855_100062519 3300005563 Bacteria 4346
30 Ga0068855_100084857 3300005563 Unclassified 3665
31 Ga0070664_100103887 3300005564 Bacteria 2474
32 Ga0068857_100812450 3300005577 Bacteria 893
33 Ga0068856_100045639 3300005614 Bacteria 4315
34 Ga0068860_100027074 3300005843 Bacteria 5524
35 Ga0097621_100141170 3300006237 Unclassified 2058
36 Ga0097621_100556846 3300006237 Unclassified 1044
37 Ga0097621_100619006 3300006237 Bacteria 991
38 Ga0068871_100067023 3300006358 Bacteria 2943
39 Ga0068871_100386784 3300006358 Bacteria 1244
40 Ga0075431_100044279 3300006847 Plasmid 4590
41 Ga0075433_10109102 3300006852 Bacteria 2455
42 Ga0075434_100151786 3300006871 Unclassified 2337
43 Ga0075436_100450232 3300006914 Unclassified 937
44 Ga0097620_100416788 3300006931 Bacteria 1439
45 Ga0111539_10048104 3300009094 Bacteria 5094
46 Ga0111539_10978022 3300009094 Bacteria 984
47 Ga0105242_11200958 3300009176 Bacteria 778
48 Ga0105242_11496358 3300009176 Unclassified 706
49 Ga0105249_10049773 3300009553 Bacteria 3821
50 Ga0105239_10118843 3300010375 Bacteria 2933
51 Ga0157373_10077654 3300013100 Bacteria 2342
52 Ga0157371_10020614 3300013102 Bacteria 4851
53 Ga0157371_10105333 3300013102 Unclassified 2001
54 Ga0157371_10120079 3300013102 Bacteria 1868
55 Ga0157371_10139288 3300013102 Bacteria 1728
56 Ga0157374_10041607 3300013296 Bacteria 4236
57 Ga0157374_10163149 3300013296 Unclassified 2171
58 Ga0157378_10006950 3300013297 Bacteria 9872
59 Ga0157378_11035900 3300013297 Bacteria 856
60 Ga0163162_10006296 3300013306 Bacteria 11495
61 Ga0163162_10018831 3300013306 Bacteria 6769
62 Ga0163162_10042668 3300013306 Bacteria 4541
63 Ga0163162_10129880 3300013306 Unclassified 2628
64 Ga0163162_10436513 3300013306 Bacteria 1442
65 Ga0163162_10779394 3300013306 Bacteria 1074
66 Ga0157372_10098811 3300013307 Bacteria 3330
67 Ga0157372_10437882 3300013307 Bacteria 1524
68 Ga0157372_10484576 3300013307 Bacteria 1442
69 Ga0157372_10661417 3300013307 Bacteria 1216
70 Ga0157375_10044080 3300013308 Bacteria 4330
71 Ga0157375_10096639 3300013308 Bacteria 3027
72 Ga0157375_10299620 3300013308 Bacteria 1771
73 Ga0163163_10001884 3300014325 Bacteria 17736
74 Ga0157380_10256923 3300014326 Unclassified 1585
75 Ga0157377_10023964 3300014745 Bacteria 3241
76 Ga0157379_10115301 3300014968 Unclassified 2416
77 Ga0157379_10391149 3300014968 Bacteria 1277
78 Ga0157379_11051439 3300014968 Unclassified 778
79 Ga0157376_10512888 3300014969 Bacteria 1180
80 Ga0163161_10081249 3300017792 Unclassified 2386
81 Ga0163161_10453537 3300017792 Bacteria 1037
82 Ga0206353_11151197 3300020082 Bacteria 2988
83 Ga0207656_10000081 3300025321 Bacteria 35913
84 Ga0207682_10253495 3300025893 Bacteria 820
85 Ga0207645_10057047 3300025907 Unclassified 2493
86 Ga0207705_10328747 3300025909 Unclassified 1175
87 Ga0207657_10016002 3300025919 Bacteria 7241
88 Ga0207657_10054529 3300025919 Bacteria 3457
89 Ga0207652_10000027 3300025921 Bacteria 151000
90 Ga0207652_10187210 3300025921 Bacteria 1861
91 Ga0207650_10197389 3300025925 Bacteria 1610
92 Ga0207659_10648914 3300025926 Bacteria 902
93 Ga0207687_10683007 3300025927 Unclassified 870
94 Ga0207644_10738645 3300025931 Bacteria 822
95 Ga0207706_10109904 3300025933 Unclassified 2426
96 Ga0207686_10291422 3300025934 Bacteria 1209
97 Ga0207686_10341210 3300025934 Bacteria 1125
98 Ga0207661_10016135 3300025944 Bacteria 5505
99 Ga0207661_10152125 3300025944 Bacteria 2001
100 Ga0207679_10533641 3300025945 Bacteria 1051
101 Ga0207679_10539104 3300025945 Unclassified 1046
102 Ga0207667_10184606 3300025949 Bacteria 2141
103 Ga0207651_10110167 3300025960 Bacteria 2065
104 Ga0207651_10398998 3300025960 Bacteria 1169
105 Ga0207712_10153424 3300025961 Bacteria 1781
106 Ga0207658_10072612 3300025986 Bacteria 2609
107 Ga0207677_10018233 3300026023 Unclassified 4208
108 Ga0207677_10038181 3300026023 Bacteria 3146
109 Ga0207678_10691416 3300026067 Bacteria 897
110 Ga0207702_10323208 3300026078 Bacteria 1470
111 Ga0207641_11169756 3300026088 Bacteria 768
112 Ga0207641_11482828 3300026088 Unclassified 680
113 Ga0207648_10196631 3300026089 Bacteria 1788
114 Ga0207648_10240838 3300026089 Bacteria 1611
115 Ga0207683_10026179 3300026121 Bacteria 5035
116 Ga0207683_10055021 3300026121 Bacteria 3490
117 Ga0207698_10552849 3300026142 Unclassified 1128
118 Ga0207428_10206894 3300027907 Bacteria 1476
119 Ga0268264_10002167 3300028381 Bacteria 17511
120 Ga0265324_10094656 3300029957 Bacteria 1016
121 Ga0307414_10519303 3300032004 Unclassified 1057
122 Ga0373962_0122989 3300035242 Bacteria 829
123 Ga0373931_0527872 3300035691 Unclassified 764
124 Ga0395899_0010052 3300037312 Bacteria 7254
125 Ga0395900_0092108 3300037418 Plasmid 3114
126 Ga0395898_0280095 3300037466 Bacteria 1591
127 Ga0395901_0016111 3300038443 Bacteria 7614
128 Ga0451800_0753993 3300041459 Bacteria 972
129 Ga0451802_0723226 3300041460 Bacteria 995
130 Ga0451845_0923766 3300041501 Bacteria 755
131 Ga0439449_0008838 3300042007 Bacteria 3822
132 Ga0451577_0091602 3300042876 Bacteria 2714
133 Ga0451577_0352916 3300042876 Bacteria 1334
134 Ga0453683_0121821 3300044673 Bacteria 1642
135 Ga0451576_0133865 3300045051 Bacteria 2584
136 Ga0495580_0181342 3300046472 Bacteria 1454
137 Ga0495594_0142907 3300046499 Bacteria 1358
138 Ga0495634_0023102 3300046642 Bacteria 4376
139 Ga0495636_0000039 3300047318 Bacteria 56199
140 Ga0501040_0616315 3300049576 Bacteria 784
141 Ga0501075_0265298 3300049591 Bacteria 1309
142 Ga0501045_0349432 3300049824 Bacteria 1101
143 nmdc:mga08y16_45234_c1 3300050511 Bacteria 4612
144 nmdc:mga0n895_806416_c1 3300050512 Bacteria 929
145 nmdc:mga0a205_37924_c1 3300050515 Plasmid 4634

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049591 Ga0501075_0265298 Ga0501075_0265298_417_1034 204
2 3300049824 Ga0501045_0349432 Ga0501045_0349432_31_648 204
3 3300005367 Ga0070667_100094880 Ga0070667_1000948802 213
4 3300009176 Ga0105242_11496358 Ga0105242_114963581 213
5 3300005843 Ga0068860_100027074 Ga0068860_1000270746 214
6 3300028381 Ga0268264_10002167 Ga0268264_100021679 214
7 3300046499 Ga0495594_0142907 Ga0495594_0142907_667_1320 214
8 3300005339 Ga0070660_100456401 Ga0070660_1004564012 215
9 3300010375 Ga0105239_10118843 Ga0105239_101188432 215
10 3300013296 Ga0157374_10163149 Ga0157374_101631493 215
11 3300013306 Ga0163162_10042668 Ga0163162_100426682 215
12 3300020082 Ga0206353_11151197 Ga0206353_111511972 215
13 3300049576 Ga0501040_0616315 Ga0501040_0616315_92_748 215
14 3300009176 Ga0105242_11200958 Ga0105242_112009581 216
15 3300026088 Ga0207641_11482828 Ga0207641_114828281 216
16 3300042876 Ga0451577_0352916 Ga0451577_0352916_84_737 216
17 3300044673 Ga0453683_0121821 Ga0453683_0121821_463_1116 216
18 3300045051 Ga0451576_0133865 Ga0451576_0133865_1705_2358 216
19 3300006237 Ga0097621_100619006 Ga0097621_1006190061 217
20 3300009094 Ga0111539_10048104 Ga0111539_100481043 217
21 3300014326 Ga0157380_10256923 Ga0157380_102569232 217
22 3300027907 Ga0207428_10206894 Ga0207428_102068941 217
23 3300041459 Ga0451800_0753993 Ga0451800_0753993_110_766 217
24 3300046642 Ga0495634_0023102 Ga0495634_0023102_1826_2485 217
25 3300050511 nmdc:mga08y16_45234_c1 nmdc:mga08y16_45234_c1_3154_3822 217
26 3300005327 Ga0070658_10085718 Ga0070658_100857183 218
27 3300005328 Ga0070676_10290094 Ga0070676_102900942 218
28 3300005329 Ga0070683_100321976 Ga0070683_1003219762 218
29 3300005333 Ga0070677_10009308 Ga0070677_100093082 218
30 3300005334 Ga0068869_100317652 Ga0068869_1003176522 218
31 3300005335 Ga0070666_10096606 Ga0070666_100966062 218
32 3300005337 Ga0070682_100241359 Ga0070682_1002413592 218
33 3300005338 Ga0068868_100012031 Ga0068868_1000120314 218
34 3300005339 Ga0070660_100119647 Ga0070660_1001196472 218
35 3300005339 Ga0070660_100165951 Ga0070660_1001659513 218
36 3300005354 Ga0070675_100060411 Ga0070675_1000604115 218
37 3300005356 Ga0070674_100339853 Ga0070674_1003398531 218
38 3300005364 Ga0070673_100063350 Ga0070673_1000633503 218
39 3300005364 Ga0070673_100443742 Ga0070673_1004437422 218
40 3300005366 Ga0070659_100125453 Ga0070659_1001254531 218
41 3300005366 Ga0070659_100453818 Ga0070659_1004538182 218
42 3300005455 Ga0070663_100525908 Ga0070663_1005259081 218
43 3300005457 Ga0070662_100093142 Ga0070662_1000931424 218
44 3300005457 Ga0070662_100258045 Ga0070662_1002580452 218
45 3300005459 Ga0068867_100279370 Ga0068867_1002793703 218
46 3300005459 Ga0068867_100403943 Ga0068867_1004039432 218
47 3300005530 Ga0070679_100000364 Ga0070679_10000036431 218
48 3300005530 Ga0070679_100070298 Ga0070679_1000702983 218
49 3300005535 Ga0070684_100035403 Ga0070684_1000354031 218
50 3300005539 Ga0068853_100288792 Ga0068853_1002887921 218
51 3300005547 Ga0070693_100157823 Ga0070693_1001578232 218
52 3300005563 Ga0068855_100062519 Ga0068855_1000625194 218
53 3300005563 Ga0068855_100084857 Ga0068855_1000848572 218
54 3300005564 Ga0070664_100103887 Ga0070664_1001038872 218
55 3300005577 Ga0068857_100812450 Ga0068857_1008124502 218
56 3300005614 Ga0068856_100045639 Ga0068856_1000456397 218
57 3300006237 Ga0097621_100141170 Ga0097621_1001411703 218
58 3300006237 Ga0097621_100556846 Ga0097621_1005568462 218
59 3300006358 Ga0068871_100067023 Ga0068871_1000670234 218
60 3300006358 Ga0068871_100386784 Ga0068871_1003867841 218
61 3300006847 Ga0075431_100044279 Ga0075431_1000442792 218
62 3300006852 Ga0075433_10109102 Ga0075433_101091023 218
63 3300006871 Ga0075434_100151786 Ga0075434_1001517862 218
64 3300006914 Ga0075436_100450232 Ga0075436_1004502321 218
65 3300006931 Ga0097620_100416788 Ga0097620_1004167882 218
66 3300009094 Ga0111539_10978022 Ga0111539_109780222 218
67 3300009553 Ga0105249_10049773 Ga0105249_100497732 218
68 3300013100 Ga0157373_10077654 Ga0157373_100776543 218
69 3300013102 Ga0157371_10020614 Ga0157371_100206147 218
70 3300013102 Ga0157371_10105333 Ga0157371_101053332 218
71 3300013102 Ga0157371_10120079 Ga0157371_101200791 218
72 3300013102 Ga0157371_10139288 Ga0157371_101392882 218
73 3300013296 Ga0157374_10041607 Ga0157374_100416075 218
74 3300013297 Ga0157378_10006950 Ga0157378_100069506 218
75 3300013297 Ga0157378_11035900 Ga0157378_110359001 218
76 3300013306 Ga0163162_10006296 Ga0163162_100062963 218
77 3300013306 Ga0163162_10018831 Ga0163162_100188315 218
78 3300013306 Ga0163162_10129880 Ga0163162_101298803 218
79 3300013306 Ga0163162_10436513 Ga0163162_104365131 218
80 3300013306 Ga0163162_10779394 Ga0163162_107793942 218
81 3300013307 Ga0157372_10098811 Ga0157372_100988114 218
82 3300013307 Ga0157372_10437882 Ga0157372_104378823 218
83 3300013307 Ga0157372_10484576 Ga0157372_104845762 218
84 3300013307 Ga0157372_10661417 Ga0157372_106614171 218
85 3300013308 Ga0157375_10044080 Ga0157375_100440802 218
86 3300013308 Ga0157375_10096639 Ga0157375_100966392 218
87 3300013308 Ga0157375_10299620 Ga0157375_102996202 218
88 3300014325 Ga0163163_10001884 Ga0163163_1000188419 218
89 3300014745 Ga0157377_10023964 Ga0157377_100239644 218
90 3300014968 Ga0157379_10115301 Ga0157379_101153013 218
91 3300014968 Ga0157379_10391149 Ga0157379_103911491 218
92 3300014968 Ga0157379_11051439 Ga0157379_110514391 218
93 3300014969 Ga0157376_10512888 Ga0157376_105128882 218
94 3300017792 Ga0163161_10081249 Ga0163161_100812493 218
95 3300017792 Ga0163161_10453537 Ga0163161_104535371 218
96 3300025321 Ga0207656_10000081 Ga0207656_1000008112 218
97 3300025893 Ga0207682_10253495 Ga0207682_102534951 218
98 3300025907 Ga0207645_10057047 Ga0207645_100570473 218
99 3300025909 Ga0207705_10328747 Ga0207705_103287472 218
100 3300025919 Ga0207657_10016002 Ga0207657_100160022 218
101 3300025919 Ga0207657_10054529 Ga0207657_100545292 218
102 3300025921 Ga0207652_10000027 Ga0207652_1000002730 218
103 3300025921 Ga0207652_10187210 Ga0207652_101872102 218
104 3300025925 Ga0207650_10197389 Ga0207650_101973892 218
105 3300025926 Ga0207659_10648914 Ga0207659_106489142 218
106 3300025927 Ga0207687_10683007 Ga0207687_106830071 218
107 3300025931 Ga0207644_10738645 Ga0207644_107386451 218
108 3300025933 Ga0207706_10109904 Ga0207706_101099041 218
109 3300025934 Ga0207686_10291422 Ga0207686_102914222 218
110 3300025934 Ga0207686_10341210 Ga0207686_103412102 218
111 3300025944 Ga0207661_10016135 Ga0207661_100161356 218
112 3300025944 Ga0207661_10152125 Ga0207661_101521252 218
113 3300025945 Ga0207679_10533641 Ga0207679_105336412 218
114 3300025945 Ga0207679_10539104 Ga0207679_105391042 218
115 3300025949 Ga0207667_10184606 Ga0207667_101846063 218
116 3300025960 Ga0207651_10110167 Ga0207651_101101672 218
117 3300025960 Ga0207651_10398998 Ga0207651_103989982 218
118 3300025961 Ga0207712_10153424 Ga0207712_101534241 218
119 3300025986 Ga0207658_10072612 Ga0207658_100726122 218
120 3300026023 Ga0207677_10018233 Ga0207677_100182331 218
121 3300026023 Ga0207677_10038181 Ga0207677_100381812 218
122 3300026067 Ga0207678_10691416 Ga0207678_106914162 218
123 3300026078 Ga0207702_10323208 Ga0207702_103232082 218
124 3300026088 Ga0207641_11169756 Ga0207641_111697561 218
125 3300026089 Ga0207648_10196631 Ga0207648_101966313 218
126 3300026089 Ga0207648_10240838 Ga0207648_102408382 218
127 3300026121 Ga0207683_10026179 Ga0207683_100261795 218
128 3300026121 Ga0207683_10055021 Ga0207683_100550213 218
129 3300026142 Ga0207698_10552849 Ga0207698_105528491 218
130 3300029957 Ga0265324_10094656 Ga0265324_100946562 218
131 3300032004 Ga0307414_10519303 Ga0307414_105193031 218
132 3300035242 Ga0373962_0122989 Ga0373962_0122989_51_722 218
133 3300035691 Ga0373931_0527872 Ga0373931_0527872_37_753 218
134 3300037312 Ga0395899_0010052 Ga0395899_0010052_5660_6316 218
135 3300037418 Ga0395900_0092108 Ga0395900_0092108_1787_2443 218
136 3300037466 Ga0395898_0280095 Ga0395898_0280095_897_1553 218
137 3300038443 Ga0395901_0016111 Ga0395901_0016111_4518_5174 218
138 3300041460 Ga0451802_0723226 Ga0451802_0723226_208_873 218
139 3300041501 Ga0451845_0923766 Ga0451845_0923766_72_737 218
140 3300042007 Ga0439449_0008838 Ga0439449_0008838_585_1253 218
141 3300042876 Ga0451577_0091602 Ga0451577_0091602_1184_1843 218
142 3300046472 Ga0495580_0181342 Ga0495580_0181342_320_982 218
143 3300047318 Ga0495636_0000039 Ga0495636_0000039_28833_29495 218
144 3300050512 nmdc:mga0n895_806416_c1 nmdc:mga0n895_806416_c1_65_724 218
145 3300050515 nmdc:mga0a205_37924_c1 nmdc:mga0a205_37924_c1_909_1583 218

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03358

FMN_red

NADPH-dependent FMN reductase

9

159

0.96

PF02525

Flavodoxin_2

Flavodoxin-like fold

9

170

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
1x77-assembly1.cif.gz_B crystal structure of a nad(p)h-dependent fmn reductase complexed with fmn 0.9002 12 186
3svl-assembly1.cif.gz_B structural basis of the improvement of chrr - a multi-purpose enzyme 0.8992 11 190
1x77-assembly1.cif.gz_B crystal structure of a nad(p)h-dependent fmn reductase complexed with fmn 0.8906 12 186
3s2y-assembly1.cif.gz_A crystal structure of a chromate/uranium reductase from gluconacetobacter hansenii 0.8903 10 191
4hs4-assembly1.cif.gz_G-1 crystal structure of a putative chromate reductase from gluconacetobacter hansenii, gh-chrr, containing a y129n substitution. 0.8862 10 191
ID Description Score Start End Superfamily
1x77B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain 0.9002 12 186 3.40.50.360
3svlA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain 0.8994 11 189 3.40.50.360
1x77B00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain 0.8906 12 186 3.40.50.360
3svlA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain 0.8855 11 189 3.40.50.360
af_P95105_3_183_3.40.50.360 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Flavodoxin domain 0.8683 11 185 3.40.50.360
ID Description Score Start End GO Terms
AF-A0A4D4KT54-F1-model_v4 Oxidoreductase 0.9721 35 194 GO:0005829
GO:0010181
GO:0016491
AF-A0A495HT47-F1-model_v4 deleted 0.9695 11 184
AF-A0A7W0WNT1-F1-model_v4 NAD(P)H-dependent oxidoreductase 0.9684 12 185 GO:0005829
GO:0010181
GO:0016491
AF-A0A1G0E895-F1-model_v4 NADPH-dependent FMN reductase-like domain-containing protein 0.9671 12 191 GO:0005829
GO:0010181
GO:0016491
AF-A0A2E6GLE6-F1-model_v4 NADPH-dependent FMN reductase 0.9664 12 193 GO:0005829
GO:0010181
GO:0016491

Feature Viewer

pLDDT pTM Quality
87.06 0.84 High
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Predicted Structure (AlphaFold2)

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