F194537

General Info

Members Datasets Scaffolds Average Seq Length
145 105 145 319

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10206928|Ga0114129_102069283
Length 351
Sequence MQATSALMRAGHSRAILRRSMNRVVALLAAVLASAGLAACGGDGAEPGAPRGATLVLDFQPNAVHAGIYAALAEGYYREAGVDLHVQQPSASTDAPKLLEAGRTQFAILDIHDLAIARERGLDIVGVMPIVQRPLAALIARDRTQIQTPGDLAGKTVGVTGLPSDDAVLDSVLAAGGLAPSSVHRVTIGFNAVADLRAGKLDAATAFWNAEGVTLKRDGVPIREFRVDRFGAPPYPELILCTTSKLARDDPALVRSVREATTRGYLVAVHDPDRALSSLLDAADGLDPDEQRAELRALDRANAFLPAGRFRAAPLIEWTRWEVAHGIVDHRPSLRAFGLRPDVRRLGANRP

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
3 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
4 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
13 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
16 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
17 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
21 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
22 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
23 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
28 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
33 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
36 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
37 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
38 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
39 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
40 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
53 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
54 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
55 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
56 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
57 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
58 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
59 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
60 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
61 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
62 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
63 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
64 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
65 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
66 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
67 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
68 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
69 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
70 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
71 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
72 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
73 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
74 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
75 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
76 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
77 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
78 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
79 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
80 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
81 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
82 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
83 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
84 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
85 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
86 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
87 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
88 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
89 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
93 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
94 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
95 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
96 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
97 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
98 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
99 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
100 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
101 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
102 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
103 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
104 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
105 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.14
Nodule 0
Rhizoplane 19.31
Rhizosphere 75.17
Stem 0
Stem Tuber 0
Unclassified 1.38

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10023014 3300003203 Bacteria 2469
2 Ga0068868_100016195 3300005338 Bacteria 5531
3 Ga0068868_100159776 3300005338 Bacteria 1860
4 Ga0070674_100126996 3300005356 Bacteria 1896
5 Ga0070703_10047186 3300005406 Bacteria 1364
6 Ga0070714_100003010 3300005435 Bacteria 12496
7 Ga0070714_100093675 3300005435 Bacteria 2635
8 Ga0070710_10000009 3300005437 Bacteria 165863
9 Ga0070711_100006609 3300005439 Bacteria 7004
10 Ga0070705_100002259 3300005440 Bacteria 9755
11 Ga0070685_10123872 3300005466 Bacteria 1608
12 Ga0070684_100170168 3300005535 Bacteria 1979
13 Ga0070665_100010286 3300005548 Bacteria 9467
14 Ga0070704_100037218 3300005549 Bacteria 3322
15 Ga0068854_100197964 3300005578 Bacteria 1578
16 Ga0068856_100073406 3300005614 Bacteria 3388
17 Ga0081455_10007955 3300005937 Bacteria 11088
18 Ga0081455_10062106 3300005937 Bacteria 3141
19 Ga0081538_10000467 3300005981 Bacteria 45342
20 Ga0081540_1000449 3300005983 Bacteria 40724
21 Ga0081539_10003509 3300005985 Bacteria 19131
22 Ga0070717_10000013 3300006028 Bacteria 228046
23 Ga0075365_10001932 3300006038 Bacteria 9782
24 Ga0075365_10002660 3300006038 Bacteria 8870
25 Ga0075365_10048427 3300006038 Bacteria 2797
26 Ga0075363_100035824 3300006048 Bacteria 2599
27 Ga0075364_10006609 3300006051 Bacteria 6827
28 Ga0070712_100000170 3300006175 Bacteria 35641
29 Ga0070712_100019861 3300006175 Bacteria 4391
30 Ga0075428_100186974 3300006844 Bacteria 2241
31 Ga0075430_100020198 3300006846 Bacteria 5667
32 Ga0075431_100000536 3300006847 Bacteria 31867
33 Ga0075431_100266416 3300006847 Bacteria 1737
34 Ga0075433_10084818 3300006852 Bacteria 2796
35 Ga0075434_100001678 3300006871 Bacteria 18909
36 Ga0111539_10005066 3300009094 Bacteria 17115
37 Ga0111539_10461252 3300009094 Bacteria 1480
38 Ga0105245_10006636 3300009098 Bacteria 10162
39 Ga0114129_10206928 3300009147 Bacteria 2654
40 Ga0105243_10232366 3300009148 Bacteria 1637
41 Ga0105242_10071445 3300009176 Bacteria 2880
42 Ga0105239_10032711 3300010375 Bacteria 5714
43 Ga0105239_10264720 3300010375 Bacteria 1933
44 Ga0163162_10314226 3300013306 Bacteria 1699
45 Ga0157375_10300412 3300013308 Bacteria 1769
46 Ga0163163_10286613 3300014325 Bacteria 1699
47 Ga0157379_10014957 3300014968 Bacteria 6806
48 Ga0157379_10024551 3300014968 Bacteria 5351
49 Ga0157379_10180670 3300014968 Bacteria 1906
50 Ga0213875_10037258 3300021388 Bacteria 2292
51 Ga0207692_10000005 3300025898 Bacteria 370169
52 Ga0207693_10000028 3300025915 Bacteria 120041
53 Ga0207693_10005539 3300025915 Bacteria 10504
54 Ga0207663_10020039 3300025916 Bacteria 3782
55 Ga0207687_10291696 3300025927 Bacteria 1311
56 Ga0207664_10027539 3300025929 Bacteria 4310
57 Ga0207664_10081387 3300025929 Bacteria 2635
58 Ga0207689_10460734 3300025942 Bacteria 1063
59 Ga0207661_10104086 3300025944 Bacteria 2390
60 Ga0207678_10193167 3300026067 Bacteria 1740
61 Ga0207648_10088339 3300026089 Bacteria 2706
62 Ga0207675_100026414 3300026118 Bacteria 5405
63 Ga0268266_10023800 3300028379 Bacteria 5212
64 Ga0268265_10249719 3300028380 Bacteria 1571
65 Ga0265326_10000030 3300028558 Bacteria 96518
66 Ga0265319_1003070 3300028563 Bacteria 8842
67 Ga0265334_10000026 3300028573 Bacteria 116448
68 Ga0265336_10001539 3300028666 Bacteria 10364
69 Ga0265338_10000536 3300028800 Bacteria 66434
70 Ga0265324_10002837 3300029957 Bacteria 8533
71 Ga0373931_0022559 3300035691 Bacteria 3170
72 Ga0373935_0223123 3300035692 Bacteria 1310
73 Ga0395900_0014396 3300037418 Bacteria 8073
74 Ga0395898_0001408 3300037466 Bacteria 34249
75 Ga0395898_0122202 3300037466 Bacteria 2495
76 Ga0395905_0019420 3300037471 Bacteria 6443
77 Ga0436364_0470364 3300037853 Bacteria 10566
78 Ga0395901_0004783 3300038443 Bacteria 13666
79 Ga0395901_0077826 3300038443 Bacteria 3462
80 Ga0395901_0094374 3300038443 Bacteria 3134
81 Ga0439440_0032049 3300042993 Bacteria 1246
82 Ga0466965_0019876 3300044683 Bacteria 3225
83 Ga0466963_0081207 3300044694 Bacteria 2196
84 Ga0466968_0061711 3300044735 Bacteria 1617
85 Ga0466960_0001732 3300044901 Bacteria 8011
86 Ga0466960_0015854 3300044901 Bacteria 3258
87 Ga0466960_0039817 3300044901 Bacteria 2218
88 Ga0466960_0057742 3300044901 Bacteria 1894
89 Ga0466960_0069031 3300044901 Bacteria 1755
90 Ga0466958_0014877 3300045836 Bacteria 4448
91 Ga0466958_0032909 3300045836 Bacteria 3087
92 Ga0466967_0011365 3300045976 Bacteria 6738
93 Ga0466967_0286102 3300045976 Bacteria 1583
94 Ga0466967_0333566 3300045976 Bacteria 1465
95 Ga0495641_0025776 3300046461 Bacteria 2881
96 Ga0495589_0155275 3300046794 Bacteria 1092
97 Ga0496100_0000285 3300048903 Bacteria 25690
98 Ga0496100_0005599 3300048903 Bacteria 6782
99 Ga0496101_0002936 3300048904 Bacteria 10480
100 Ga0496101_0003134 3300048904 Bacteria 10228
101 Ga0496102_0012047 3300048905 Bacteria 7473
102 Ga0496103_0020807 3300048906 Bacteria 3944
103 Ga0496104_0026838 3300048907 Bacteria 5323
104 Ga0496104_0093912 3300048907 Bacteria 2869
105 Ga0496105_0256764 3300048908 Bacteria 1414
106 Ga0496106_0022170 3300048909 Bacteria 4716
107 Ga0496106_0095454 3300048909 Bacteria 2300
108 Ga0496107_0009590 3300048910 Bacteria 6713
109 Ga0496107_0021204 3300048910 Bacteria 4593
110 Ga0496108_0000593 3300048911 Bacteria 28361
111 Ga0496108_0045800 3300048911 Bacteria 3653
112 Ga0496108_0072492 3300048911 Bacteria 2907
113 Ga0496110_0002652 3300048913 Bacteria 13492
114 Ga0496110_0148897 3300048913 Bacteria 2118
115 Ga0496111_0011152 3300048914 Bacteria 6050
116 Ga0496111_0234515 3300048914 Unclassified 1363
117 Ga0496112_0007491 3300048915 Bacteria 9689
118 Ga0496112_0103116 3300048915 Bacteria 2822
119 Ga0496112_0472065 3300048915 Bacteria 1192
120 Ga0496113_0063298 3300048916 Bacteria 2795
121 Ga0496113_0080952 3300048916 Bacteria 2488
122 Ga0496114_0024341 3300048917 Bacteria 4940
123 Ga0496114_0176061 3300048917 Bacteria 1867
124 Ga0496115_0009661 3300048918 Bacteria 7177
125 Ga0501033_0210454 3300049570 Unclassified 1387
126 Ga0501036_0007298 3300049572 Bacteria 9004
127 Ga0501036_0310500 3300049572 Bacteria 1318
128 Ga0501041_0089716 3300049577 Bacteria 1898
129 Ga0501068_0028354 3300049584 Bacteria 3311
130 Ga0501070_0203755 3300049586 Bacteria 1625
131 Ga0501071_0105128 3300049587 Bacteria 2084
132 Ga0501072_0101450 3300049588 Bacteria 2287
133 Ga0501072_0126218 3300049588 Bacteria 2039
134 Ga0501075_0026086 3300049591 Bacteria 4298
135 Ga0501075_0087662 3300049591 Bacteria 2359
136 Ga0501076_0011181 3300049592 Bacteria 6680
137 Ga0501079_0220650 3300049741 Bacteria 1481
138 nmdc:mga03n38_18813_c1 3300050490 Bacteria 2732
139 nmdc:mga06r32_48645_c1 3300050510 Bacteria 4054
140 nmdc:mga06r32_5859_c1 3300050510 Bacteria 11060
141 nmdc:mga0n895_92086_c1 3300050512 Bacteria 3035
142 nmdc:mga0a205_143809_c1 3300050515 Bacteria 2285
143 Ga0501084_0125768 3300054114 Bacteria 2157
144 Ga0501082_0175559 3300060353 Bacteria 1863
145 Ga0530510_0068203 3300061734 Bacteria 2580

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005338 Ga0068868_100159776 Ga0068868_1001597762 271
2 3300005356 Ga0070674_100126996 Ga0070674_1001269962 271
3 3300009094 Ga0111539_10461252 Ga0111539_104612522 271
4 3300009148 Ga0105243_10232366 Ga0105243_102323662 271
5 3300025927 Ga0207687_10291696 Ga0207687_102916962 271
6 3300049588 Ga0501072_0126218 Ga0501072_0126218_677_1546 283
7 3300005983 Ga0081540_1000449 Ga0081540_100044933 284
8 3300045836 Ga0466958_0014877 Ga0466958_0014877_2422_3360 284
9 3300049587 Ga0501071_0105128 Ga0501071_0105128_20_901 284
10 3300005535 Ga0070684_100170168 Ga0070684_1001701682 285
11 3300045976 Ga0466967_0286102 Ga0466967_0286102_365_1309 287
12 3300044694 Ga0466963_0081207 Ga0466963_0081207_106_1047 288
13 3300006048 Ga0075363_100035824 Ga0075363_1000358242 289
14 3300050490 nmdc:mga03n38_18813_c1 nmdc:mga03n38_18813_c1_153_1130 289
15 3300028563 Ga0265319_1003070 Ga0265319_10030708 290
16 3300046461 Ga0495641_0025776 Ga0495641_0025776_1919_2848 290
17 3300006038 Ga0075365_10048427 Ga0075365_100484272 291
18 3300013308 Ga0157375_10300412 Ga0157375_103004122 291
19 3300026089 Ga0207648_10088339 Ga0207648_100883392 292
20 3300026118 Ga0207675_100026414 Ga0207675_1000264143 292
21 3300045976 Ga0466967_0333566 Ga0466967_0333566_180_1097 292
22 3300005937 Ga0081455_10007955 Ga0081455_1000795511 294
23 3300044901 Ga0466960_0057742 Ga0466960_0057742_282_1223 294
24 3300046794 Ga0495589_0155275 Ga0495589_0155275_70_1074 294
25 3300005437 Ga0070710_10000009 Ga0070710_100000095 295
26 3300005466 Ga0070685_10123872 Ga0070685_101238722 295
27 3300005548 Ga0070665_100010286 Ga0070665_1000102868 295
28 3300006844 Ga0075428_100186974 Ga0075428_1001869742 295
29 3300006847 Ga0075431_100000536 Ga0075431_10000053628 295
30 3300006852 Ga0075433_10084818 Ga0075433_100848183 295
31 3300006871 Ga0075434_100001678 Ga0075434_10000167815 295
32 3300009094 Ga0111539_10005066 Ga0111539_1000506615 295
33 3300025898 Ga0207692_10000005 Ga0207692_10000005321 295
34 3300026067 Ga0207678_10193167 Ga0207678_101931672 295
35 3300028379 Ga0268266_10023800 Ga0268266_100238002 295
36 3300050510 nmdc:mga06r32_5859_c1 nmdc:mga06r32_5859_c1_7392_8387 295
37 3300037418 Ga0395900_0014396 Ga0395900_0014396_6568_7611 296
38 3300037466 Ga0395898_0001408 Ga0395898_0001408_8516_9559 296
39 3300037471 Ga0395905_0019420 Ga0395905_0019420_1418_2461 296
40 3300038443 Ga0395901_0004783 Ga0395901_0004783_7845_8888 296
41 3300006038 Ga0075365_10001932 Ga0075365_100019324 297
42 3300038443 Ga0395901_0077826 Ga0395901_0077826_1035_2027 297
43 3300048909 Ga0496106_0022170 Ga0496106_0022170_201_1196 297
44 3300049584 Ga0501068_0028354 Ga0501068_0028354_1557_2552 297
45 3300050512 nmdc:mga0n895_92086_c1 nmdc:mga0n895_92086_c1_27_1022 297
46 3300050515 nmdc:mga0a205_143809_c1 nmdc:mga0a205_143809_c1_901_1896 297
47 3300005338 Ga0068868_100016195 Ga0068868_1000161953 298
48 3300005406 Ga0070703_10047186 Ga0070703_100471862 298
49 3300005439 Ga0070711_100006609 Ga0070711_1000066092 298
50 3300005549 Ga0070704_100037218 Ga0070704_1000372184 298
51 3300006051 Ga0075364_10006609 Ga0075364_100066094 298
52 3300006175 Ga0070712_100019861 Ga0070712_1000198612 298
53 3300009098 Ga0105245_10006636 Ga0105245_100066364 298
54 3300009147 Ga0114129_10206928 Ga0114129_102069283 298
55 3300009176 Ga0105242_10071445 Ga0105242_100714454 298
56 3300013306 Ga0163162_10314226 Ga0163162_103142263 298
57 3300025915 Ga0207693_10005539 Ga0207693_100055396 298
58 3300025916 Ga0207663_10020039 Ga0207663_100200395 298
59 3300035691 Ga0373931_0022559 Ga0373931_0022559_1049_2014 298
60 3300035692 Ga0373935_0223123 Ga0373935_0223123_87_1052 298
61 3300037466 Ga0395898_0122202 Ga0395898_0122202_740_1762 298
62 3300038443 Ga0395901_0094374 Ga0395901_0094374_1852_2874 298
63 3300045976 Ga0466967_0011365 Ga0466967_0011365_5485_6480 298
64 3300048903 Ga0496100_0005599 Ga0496100_0005599_5220_6185 298
65 3300048904 Ga0496101_0002936 Ga0496101_0002936_4950_5915 298
66 3300048905 Ga0496102_0012047 Ga0496102_0012047_4374_5339 298
67 3300048906 Ga0496103_0020807 Ga0496103_0020807_1123_2088 298
68 3300048907 Ga0496104_0093912 Ga0496104_0093912_433_1398 298
69 3300048910 Ga0496107_0009590 Ga0496107_0009590_3572_4537 298
70 3300048914 Ga0496111_0011152 Ga0496111_0011152_3935_4900 298
71 3300048915 Ga0496112_0103116 Ga0496112_0103116_1657_2622 298
72 3300048916 Ga0496113_0080952 Ga0496113_0080952_561_1526 298
73 3300048917 Ga0496114_0024341 Ga0496114_0024341_1863_2828 298
74 3300048918 Ga0496115_0009661 Ga0496115_0009661_6163_7128 298
75 3300049570 Ga0501033_0210454 Ga0501033_0210454_139_1125 298
76 3300049572 Ga0501036_0310500 Ga0501036_0310500_276_1262 298
77 3300049591 Ga0501075_0087662 Ga0501075_0087662_105_1091 298
78 3300054114 Ga0501084_0125768 Ga0501084_0125768_1030_2016 298
79 3300060353 Ga0501082_0175559 Ga0501082_0175559_20_1006 298
80 3300005435 Ga0070714_100093675 Ga0070714_1000936752 299
81 3300010375 Ga0105239_10264720 Ga0105239_102647202 299
82 3300014968 Ga0157379_10180670 Ga0157379_101806702 299
83 3300025929 Ga0207664_10081387 Ga0207664_100813874 299
84 3300025942 Ga0207689_10460734 Ga0207689_104607341 299
85 3300042993 Ga0439440_0032049 Ga0439440_0032049_233_1201 299
86 3300048911 Ga0496108_0072492 Ga0496108_0072492_1780_2745 299
87 3300048913 Ga0496110_0148897 Ga0496110_0148897_350_1315 299
88 3300048915 Ga0496112_0472065 Ga0496112_0472065_157_1122 299
89 3300048917 Ga0496114_0176061 Ga0496114_0176061_517_1482 299
90 3300005578 Ga0068854_100197964 Ga0068854_1001979641 300
91 3300005614 Ga0068856_100073406 Ga0068856_1000734063 300
92 3300005981 Ga0081538_10000467 Ga0081538_1000046734 300
93 3300014968 Ga0157379_10014957 Ga0157379_100149579 300
94 3300044901 Ga0466960_0001732 Ga0466960_0001732_2041_3009 300
95 3300044901 Ga0466960_0015854 Ga0466960_0015854_1951_2919 300
96 3300044901 Ga0466960_0039817 Ga0466960_0039817_1111_2079 300
97 3300044901 Ga0466960_0069031 Ga0466960_0069031_556_1533 300
98 3300048907 Ga0496104_0026838 Ga0496104_0026838_2436_3416 300
99 3300048908 Ga0496105_0256764 Ga0496105_0256764_329_1309 300
100 3300048909 Ga0496106_0095454 Ga0496106_0095454_1285_2265 300
101 3300048910 Ga0496107_0021204 Ga0496107_0021204_100_1080 300
102 3300048911 Ga0496108_0000593 Ga0496108_0000593_13410_14390 300
103 3300048913 Ga0496110_0002652 Ga0496110_0002652_9923_10903 300
104 3300048915 Ga0496112_0007491 Ga0496112_0007491_3591_4571 300
105 3300048916 Ga0496113_0063298 Ga0496113_0063298_1406_2386 300
106 3300005937 Ga0081455_10062106 Ga0081455_100621061 301
107 3300006038 Ga0075365_10002660 Ga0075365_100026607 301
108 3300006846 Ga0075430_100020198 Ga0075430_1000201985 301
109 3300006847 Ga0075431_100266416 Ga0075431_1002664163 301
110 3300050510 nmdc:mga06r32_48645_c1 nmdc:mga06r32_48645_c1_552_1529 301
111 3300048911 Ga0496108_0045800 Ga0496108_0045800_2347_3336 302
112 3300049572 Ga0501036_0007298 Ga0501036_0007298_5018_6004 302
113 3300049577 Ga0501041_0089716 Ga0501041_0089716_702_1688 302
114 3300049588 Ga0501072_0101450 Ga0501072_0101450_690_1676 302
115 3300049591 Ga0501075_0026086 Ga0501075_0026086_1528_2514 302
116 3300049592 Ga0501076_0011181 Ga0501076_0011181_1164_2150 302
117 3300049741 Ga0501079_0220650 Ga0501079_0220650_278_1264 302
118 3300061734 Ga0530510_0068203 Ga0530510_0068203_1339_2325 302
119 3300005435 Ga0070714_100003010 Ga0070714_10000301012 303
120 3300005440 Ga0070705_100002259 Ga0070705_1000022595 303
121 3300006175 Ga0070712_100000170 Ga0070712_1000001704 303
122 3300010375 Ga0105239_10032711 Ga0105239_100327117 303
123 3300014325 Ga0163163_10286613 Ga0163163_102866132 303
124 3300025915 Ga0207693_10000028 Ga0207693_10000028125 303
125 3300025929 Ga0207664_10027539 Ga0207664_100275395 303
126 3300028380 Ga0268265_10249719 Ga0268265_102497191 303
127 3300028558 Ga0265326_10000030 Ga0265326_1000003067 303
128 3300028573 Ga0265334_10000026 Ga0265334_1000002612 303
129 3300028666 Ga0265336_10001539 Ga0265336_100015398 303
130 3300028800 Ga0265338_10000536 Ga0265338_1000053664 303
131 3300029957 Ga0265324_10002837 Ga0265324_100028374 303
132 3300044683 Ga0466965_0019876 Ga0466965_0019876_1361_2353 303
133 3300044735 Ga0466968_0061711 Ga0466968_0061711_75_1067 303
134 3300048903 Ga0496100_0000285 Ga0496100_0000285_4200_5201 303
135 3300048904 Ga0496101_0003134 Ga0496101_0003134_4164_5165 303
136 3300048914 Ga0496111_0234515 Ga0496111_0234515_141_1142 303
137 3300003203 JGI25406J46586_10023014 JGI25406J46586_100230142 304
138 3300005985 Ga0081539_10003509 Ga0081539_1000350919 304
139 3300006028 Ga0070717_10000013 Ga0070717_10000013161 304
140 3300014968 Ga0157379_10024551 Ga0157379_100245513 304
141 3300021388 Ga0213875_10037258 Ga0213875_100372582 304
142 3300025944 Ga0207661_10104086 Ga0207661_101040863 304
143 3300037853 Ga0436364_0470364 Ga0436364_0470364_242_1252 304
144 3300045836 Ga0466958_0032909 Ga0466958_0032909_1565_2554 304
145 3300049586 Ga0501070_0203755 Ga0501070_0203755_575_1567 304

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09084

NMT1

NMT1/THI5 like

62

275

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
4nmy-assembly2.cif.gz_B crystal structure of the thiamin-bound form of substrate-binding protein of abc transporter from clostridium difficile 0.8524 11 304
3ix1-assembly1.cif.gz_A periplasmic n-formyl-4-amino-5-aminomethyl-2-methylpyrimidine binding protein from bacillus halodurans 0.8391 10 298
4nmy-assembly2.cif.gz_B crystal structure of the thiamin-bound form of substrate-binding protein of abc transporter from clostridium difficile 0.8369 11 304
4h6d-assembly4.cif.gz_D crystal structure of plp-soaked hmp synthase thi5 from s. cerevisiae 0.8344 12 303
2x26-assembly2.cif.gz_B crystal structure of the periplasmic aliphatic sulphonate binding protein ssua from escherichia coli 0.8297 11 294
ID Description Score Start End Superfamily
4nmyB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9038 11 304 3.40.190.10
4nmyB01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.895 11 304 3.40.190.10
3ix1B02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8904 94 193 3.40.190.10
3ix1B01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.888 10 298 3.40.190.10
3ix1B01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.8669 10 298 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A7W0TFI1-F1-model_v4 Thiamine pyrimidine synthase 0.9831 12 303 GO:0009228
GO:0016740
GO:0046872
AF-A0A5B8U4X0-F1-model_v4 Thiamine pyrimidine synthase 0.9678 12 301 GO:0009228
GO:0016740
GO:0046872
AF-Q1AU98-F1-model_v4 Hydroxymethylpyrimidine-binding protein 0.9535 12 304 GO:0009228
GO:0016740
GO:0046872
AF-A0A7W0TFI1-F1-model_v4 Thiamine pyrimidine synthase 0.9416 12 303 GO:0009228
GO:0016740
GO:0046872
AF-A0A2P8EQB8-F1-model_v4 deleted 0.9413 1 298

Feature Viewer

pLDDT pTM Quality
94.92 0.91 High
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Predicted Structure (AlphaFold2)

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