F194297
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 145 | 106 | 104 | 304 |
Family's Representative Sequence
| Representative Sequence | 3300006051|Ga0075364_10204368|Ga0075364_102043682 |
| Length | 329 |
| Sequence | MTTTDPTDASGIPRDDDTDTGARAGTPTAATTVQFGQHAPARRVLVHVSDTHLLAGGAALGGRYDASGNLDATLAAIERTGIRPDALVFTGDLTDLGEPDAYRRLREAVEPVAERLGAPIVWVAGNHDERGPMRAGLWGGAADDESPITAVHDLGGLRLIALDSTVPGWHHGAIDAAQREWLRQVLSEPAPLGTILALHHPPIPSHVPFFDILELRDQPGLAEIVRGTDVRAILAGHLHYSTSGTFAGIPVSVASATCYTMNLQSPADEVNGMDAGSAFQLVHVWDDSVTASVVPVVEADTADHFSPEWLARMSALSPRERLEAFSRKR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2585428157 | Microbacterium sp. CF335 | Isolate | Rhizosphere |
| 2 | 2643221542 | Microbacterium sp. Root1433D1 | Isolate | Unclassified |
| 3 | 2643221546 | Microbacterium sp. Root53 | Isolate | Unclassified |
| 4 | 2643221566 | Microbacterium sp. Root166 | Isolate | Unclassified |
| 5 | 2643221575 | Microbacterium sp. Root61 | Isolate | Unclassified |
| 6 | 2643221597 | Microbacterium sp. Root180 | Isolate | Unclassified |
| 7 | 2643221635 | Yonghaparkia sp. Root332 | Isolate | Unclassified |
| 8 | 2751185788 | Curtobacterium pusillum AA3 | Isolate | Unclassified |
| 9 | 2757320536 | Microbacterium sp. NFIX05 | Isolate | Unclassified |
| 10 | 2773857758 | Microbacterium chocolatum 1320 | Isolate | Unclassified |
| 11 | 2773857763 | Microbacterium sp. SAI-030 | Isolate | Unclassified |
| 12 | 2808606306 | Microbacterium sp. SLBN-146 | Isolate | Unclassified |
| 13 | 2808606368 | Microbacterium sp. SLBN-1 | Isolate | Unclassified |
| 14 | 2808606447 | Microbacterium sp. HAR-UPW-R2A-48 | Isolate | Unclassified |
| 15 | 2811994872 | Microbacterium sp. MU4Y-5-1 | Isolate | Unclassified |
| 16 | 2821268502 | Microbacterium sp. YT0620BN | Isolate | Unclassified |
| 17 | 2833709550 | Microbacterium sp. 3290 | Isolate | Rhizosphere |
| 18 | 2852632344 | Microbacterium sp. AK009 | Isolate | Rhizosphere |
| 19 | 2857720070 | Microbacterium sp. R-72113 | Isolate | Unclassified |
| 20 | 2857729791 | Plantibacter sp. R-72288 | Isolate | Unclassified |
| 21 | 2857737099 | Lysinimonas sp. R-73066 | Isolate | Unclassified |
| 22 | 2870628048 | Microbacterium thalassium DSM 12511 | Isolate | Rhizosphere |
| 23 | 2904509784 | Microbacterium sp. 1676 | Isolate | Rhizosphere |
| 24 | 2906799679 | Microbacterium karelineae TRM80801 | Isolate | Unclassified |
| 25 | 2908678064 | Microbacterium sp. 1518 | Isolate | Rhizosphere |
| 26 | 2919069694 | Microbacterium sp. 1154 | Isolate | Unclassified |
| 27 | 2928090899 | Microbacterium sp. 1262 | Isolate | Rhizosphere |
| 28 | 2928121344 | Plantibacter flavus 1756 | Isolate | Rhizosphere |
| 29 | 2939660829 | Mycetocola sp. 2940 | Isolate | Rhizosphere |
| 30 | 2946033335 | Microbacterium sp. W4I4 | Isolate | Rhizosphere |
| 31 | 2966921586 | Rathayibacter agropyri 617 | Isolate | Rhizosphere |
| 32 | 2974294766 | Microbacterium proteolyticum SORGH_AS 209 | Isolate | Unclassified |
| 33 | 2974324384 | Microbacterium sp. SORGH_AS 344 | Isolate | Unclassified |
| 34 | 2977228692 | Microbacterium sp. SORGH_AS 421 | Isolate | Unclassified |
| 35 | 2977236895 | Microbacterium testaceum SORGH_AS 426 | Isolate | Unclassified |
| 36 | 2977251589 | Microbacterium sp. SORGH_AS 505 | Isolate | Unclassified |
| 37 | 2977264416 | Microbacterium testaceum SORGH_AS 594 | Isolate | Unclassified |
| 38 | 2984542743 | Microbacterium sp. SORGH_AS454 | Isolate | Aerial Root |
| 39 | 2984580707 | Microbacterium paludicola SORGH_AS919 | Isolate | Aerial Root |
| 40 | 3300003578 | Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) | Metatranscriptome | Unclassified |
| 41 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 42 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 43 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 44 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 45 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 46 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 47 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 48 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 49 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 50 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 51 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 52 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 53 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300013250 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 | Metagenome | Rhizosphere |
| 55 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 57 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 58 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300027866 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) | Metagenome | Endosphere |
| 62 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 64 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 65 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 66 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 67 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 68 | 3300041491 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG | Metagenome | Unclassified |
| 69 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 70 | 3300046453 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere | Metagenome | Rhizosphere |
| 71 | 3300046457 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere | Metagenome | Rhizosphere |
| 72 | 3300046538 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere | Metagenome | Rhizosphere |
| 73 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 74 | 3300047320 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere | Metagenome | Rhizosphere |
| 75 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 76 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 77 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 78 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 79 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 80 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 81 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 82 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 83 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 84 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 85 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 86 | 3300048919 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled | Metagenome | Unclassified |
| 87 | 3300048920 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 | Metagenome | Unclassified |
| 88 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 89 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 90 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 91 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 92 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 93 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 94 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 95 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 96 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 97 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 98 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 99 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 100 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 101 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 102 | 3300050495 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation | Metagenome | Endosphere |
| 103 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 104 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 105 | 8016254467 | Microbacterium sp. SLBN-111 (version 3) | Isolate | Rhizosphere |
| 106 | 8045830549 | Microbacterium yannicii DSM 23203 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 70.34 |
| Metatranscriptomes | 1.38 |
| Isolates | 28.28 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 1.38 |
| Bulb | 0 |
| Endosphere | 13.79 |
| Nodule | 0 |
| Rhizoplane | 11.03 |
| Rhizosphere | 27.59 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 46.21 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0006562J51391_1059013 | 3300003578 | Bacteria | 11208 |
| 2 | Ga0006562J51391_1059016 | 3300003578 | Bacteria | 7470 |
| 3 | Ga0070683_100010804 | 3300005329 | Bacteria | 7858 |
| 4 | Ga0068853_100036144 | 3300005539 | Bacteria | 4199 |
| 5 | Ga0068855_100768663 | 3300005563 | Bacteria | 1026 |
| 6 | Ga0075365_10004250 | 3300006038 | Bacteria | 7552 |
| 7 | Ga0075365_10014288 | 3300006038 | Bacteria | 4774 |
| 8 | Ga0075365_10270171 | 3300006038 | Bacteria | 1196 |
| 9 | Ga0075368_10004555 | 3300006042 | Bacteria | 4709 |
| 10 | Ga0075363_100004723 | 3300006048 | Bacteria | 5999 |
| 11 | Ga0075364_10019435 | 3300006051 | Bacteria | 4264 |
| 12 | Ga0075364_10056413 | 3300006051 | Bacteria | 2572 |
| 13 | Ga0075364_10204368 | 3300006051 | Bacteria | 1339 |
| 14 | Ga0075367_10006259 | 3300006178 | Bacteria | 5998 |
| 15 | Ga0075369_10003014 | 3300006186 | Bacteria | 6094 |
| 16 | Ga0075370_10003789 | 3300006353 | Bacteria | 7238 |
| 17 | Ga0105243_10012528 | 3300009148 | Bacteria | 6412 |
| 18 | Ga0105243_10098469 | 3300009148 | Bacteria | 2422 |
| 19 | Ga0105249_10531251 | 3300009553 | Bacteria | 1225 |
| 20 | Ga0157369_10008437 | 3300013105 | Bacteria | 11818 |
| 21 | Ga0171462_1001 | 3300013250 | Bacteria | 1135406 |
| 22 | Ga0163162_10006570 | 3300013306 | Bacteria | 11268 |
| 23 | Ga0163161_10132400 | 3300017792 | Bacteria | 1882 |
| 24 | Ga0209646_1000098 | 3300025246 | Bacteria | 180711 |
| 25 | Ga0207655_1015062 | 3300025728 | Bacteria | 4325 |
| 26 | Ga0207647_10021389 | 3300025904 | Bacteria | 4318 |
| 27 | Ga0207704_10080739 | 3300025938 | Bacteria | 2101 |
| 28 | Ga0209813_10007044 | 3300027866 | Bacteria | 2792 |
| 29 | Ga0268265_10148689 | 3300028380 | Bacteria | 1973 |
| 30 | Ga0307406_10000592 | 3300031901 | Bacteria | 20809 |
| 31 | Ga0307406_10140729 | 3300031901 | Bacteria | 1708 |
| 32 | Ga0307409_100109719 | 3300031995 | Bacteria | 2311 |
| 33 | Ga0307416_100619565 | 3300032002 | Bacteria | 1164 |
| 34 | Ga0307414_10233889 | 3300032004 | Bacteria | 1517 |
| 35 | Ga0307415_100023663 | 3300032126 | Bacteria | 3819 |
| 36 | Ga0451833_1325796 | 3300041491 | Bacteria | 1796 |
| 37 | Ga0466968_0016994 | 3300044735 | Bacteria | 2902 |
| 38 | Ga0495627_000831 | 3300046453 | Bacteria | 22269 |
| 39 | Ga0495590_0000743 | 3300046457 | Bacteria | 14782 |
| 40 | Ga0495609_0012755 | 3300046538 | Bacteria | 3982 |
| 41 | Ga0495656_0029421 | 3300046615 | Bacteria | 2212 |
| 42 | Ga0495672_0042633 | 3300047320 | Bacteria | 2735 |
| 43 | Ga0496101_0193180 | 3300048904 | Bacteria | 1571 |
| 44 | Ga0496103_0017310 | 3300048906 | Bacteria | 4313 |
| 45 | Ga0496104_0057413 | 3300048907 | Bacteria | 3682 |
| 46 | Ga0496105_0097188 | 3300048908 | Bacteria | 2432 |
| 47 | Ga0496105_0382234 | 3300048908 | Bacteria | 1120 |
| 48 | Ga0496109_0180272 | 3300048912 | Bacteria | 1983 |
| 49 | Ga0496110_0151936 | 3300048913 | Bacteria | 2097 |
| 50 | Ga0496111_0033603 | 3300048914 | Bacteria | 3658 |
| 51 | Ga0496112_0044186 | 3300048915 | Bacteria | 4365 |
| 52 | Ga0496113_0072510 | 3300048916 | Bacteria | 2621 |
| 53 | Ga0496114_0032618 | 3300048917 | Bacteria | 4288 |
| 54 | Ga0496114_0038531 | 3300048917 | Bacteria | 3955 |
| 55 | Ga0496114_0078598 | 3300048917 | Bacteria | 2783 |
| 56 | Ga0496114_0090166 | 3300048917 | Bacteria | 2602 |
| 57 | Ga0496115_0030172 | 3300048918 | Bacteria | 4263 |
| 58 | Ga0496115_0086070 | 3300048918 | Bacteria | 2564 |
| 59 | Ga0496116_0006712 | 3300048919 | Bacteria | 10368 |
| 60 | Ga0496117_0000028 | 3300048920 | Bacteria | 407392 |
| 61 | Ga0496117_0005090 | 3300048920 | Bacteria | 14059 |
| 62 | Ga0496117_0043679 | 3300048920 | Bacteria | 3256 |
| 63 | Ga0496118_0009754 | 3300048921 | Bacteria | 9631 |
| 64 | Ga0496119_0002375 | 3300048922 | Bacteria | 20686 |
| 65 | Ga0496119_0002505 | 3300048922 | Bacteria | 20085 |
| 66 | Ga0496119_0004315 | 3300048922 | Bacteria | 14201 |
| 67 | Ga0496119_0009032 | 3300048922 | Bacteria | 8642 |
| 68 | Ga0496119_0012681 | 3300048922 | Bacteria | 6818 |
| 69 | Ga0496120_0002231 | 3300048923 | Bacteria | 20317 |
| 70 | Ga0496120_0006437 | 3300048923 | Bacteria | 9026 |
| 71 | Ga0496120_0011275 | 3300048923 | Bacteria | 6159 |
| 72 | Ga0496121_0133244 | 3300048924 | Bacteria | 1856 |
| 73 | Ga0496122_0000055 | 3300048925 | Bacteria | 258485 |
| 74 | Ga0496122_0000377 | 3300048925 | Bacteria | 95371 |
| 75 | Ga0496122_0002954 | 3300048925 | Bacteria | 23177 |
| 76 | Ga0496122_0033372 | 3300048925 | Bacteria | 4235 |
| 77 | Ga0496122_0058103 | 3300048925 | Bacteria | 2867 |
| 78 | Ga0496123_0000003 | 3300048926 | Bacteria | 866556 |
| 79 | Ga0496123_0000879 | 3300048926 | Bacteria | 47728 |
| 80 | Ga0496123_0005033 | 3300048926 | Bacteria | 13524 |
| 81 | Ga0496123_0051732 | 3300048926 | Bacteria | 2733 |
| 82 | Ga0496124_0003330 | 3300048927 | Bacteria | 19792 |
| 83 | Ga0496124_0006787 | 3300048927 | Bacteria | 12361 |
| 84 | Ga0496124_0083214 | 3300048927 | Bacteria | 2626 |
| 85 | Ga0496125_0000120 | 3300048928 | Bacteria | 175991 |
| 86 | Ga0496125_0001979 | 3300048928 | Bacteria | 27860 |
| 87 | Ga0496125_0015830 | 3300048928 | Bacteria | 7266 |
| 88 | Ga0496125_0018152 | 3300048928 | Bacteria | 6686 |
| 89 | Ga0496125_0021979 | 3300048928 | Bacteria | 5933 |
| 90 | Ga0496125_0038789 | 3300048928 | Bacteria | 4114 |
| 91 | Ga0496126_0010765 | 3300048929 | Bacteria | 9551 |
| 92 | Ga0496126_0011850 | 3300048929 | Bacteria | 8970 |
| 93 | Ga0496126_0013773 | 3300048929 | Bacteria | 8203 |
| 94 | Ga0496126_0259165 | 3300048929 | Bacteria | 1447 |
| 95 | Ga0501039_0044654 | 3300049575 | Bacteria | 3424 |
| 96 | Ga0501070_0002401 | 3300049586 | Bacteria | 16432 |
| 97 | nmdc:mga00v17_168945_c1 | 3300050491 | Bacteria | 1410 |
| 98 | nmdc:mga00v17_244041_c1 | 3300050491 | Bacteria | 1165 |
| 99 | nmdc:mga0yw44_102316_c1 | 3300050492 | Bacteria | 1826 |
| 100 | nmdc:mga06z11_2214_c1 | 3300050494 | Bacteria | 7386 |
| 101 | nmdc:mga04h51_1849_c1 | 3300050495 | Bacteria | 4945 |
| 102 | nmdc:mga07m45_3046_c1 | 3300050496 | Bacteria | 8001 |
| 103 | nmdc:mga0sz30_16832_c1 | 3300050516 | Bacteria | 2908 |
| 104 | nmdc:mga0sz30_4575_c1 | 3300050516 | Bacteria | 5010 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300050491 | nmdc:mga00v17_244041_c1 | nmdc:mga00v17_244041_c1_270_1091 | 271 |
| 2 | iso_pu_bacteria | 2751185788 | 2753304397 | 277 |
| 3 | 3300009148 | Ga0105243_10098469 | Ga0105243_100984693 | 285 |
| 4 | iso_pu_bacteria | 2906799679 | 2906801471 | 291 |
| 5 | iso_pu_bacteria | 2643221546 | 2643754158 | 292 |
| 6 | iso_pu_bacteria | 2857737099 | 2857738725 | 292 |
| 7 | iso_pu_bacteria | 2643221635 | 2644198331 | 293 |
| 8 | iso_pu_bacteria | 2939660829 | 2939664234 | 294 |
| 9 | iso_pu_bacteria | 2757320536 | 2758224280 | 295 |
| 10 | iso_pu_bacteria | 2773857758 | 2774381447 | 295 |
| 11 | iso_pu_bacteria | 2904509784 | 2904509868 | 295 |
| 12 | iso_pu_bacteria | 2908678064 | 2908678917 | 295 |
| 13 | iso_pu_bacteria | 2919069694 | 2919071265 | 295 |
| 14 | iso_pu_bacteria | 2974294766 | 2974297893 | 295 |
| 15 | iso_pu_bacteria | 2974324384 | 2974325869 | 295 |
| 16 | iso_pu_bacteria | 2977228692 | 2977230820 | 295 |
| 17 | iso_pu_bacteria | 2977236895 | 2977239617 | 295 |
| 18 | iso_pu_bacteria | 2977251589 | 2977253525 | 295 |
| 19 | iso_pu_bacteria | 2977264416 | 2977266048 | 295 |
| 20 | iso_pu_bacteria | 2984542743 | 2984546112 | 295 |
| 21 | iso_pu_bacteria | 8016254467 | 8016254558 | 295 |
| 22 | 3300005329 | Ga0070683_100010804 | Ga0070683_1000108046 | 296 |
| 23 | 3300009553 | Ga0105249_10531251 | Ga0105249_105312512 | 296 |
| 24 | 3300028380 | Ga0268265_10148689 | Ga0268265_101486891 | 296 |
| 25 | 3300046457 | Ga0495590_0000743 | Ga0495590_0000743_2398_3333 | 296 |
| 26 | 3300047320 | Ga0495672_0042633 | Ga0495672_0042633_277_1212 | 296 |
| 27 | 3300050492 | nmdc:mga0yw44_102316_c1 | nmdc:mga0yw44_102316_c1_709_1629 | 296 |
| 28 | iso_pu_bacteria | 2585428157 | 2588106624 | 296 |
| 29 | iso_pu_bacteria | 2857729791 | 2857733503 | 296 |
| 30 | iso_pu_bacteria | 2928121344 | 2928124698 | 296 |
| 31 | iso_pu_bacteria | 2946033335 | 2946034144 | 296 |
| 32 | 3300046538 | Ga0495609_0012755 | Ga0495609_0012755_789_1721 | 297 |
| 33 | iso_pu_bacteria | 2643221575 | 2643888667 | 297 |
| 34 | iso_pu_bacteria | 2773857763 | 2774400046 | 297 |
| 35 | iso_pu_bacteria | 2808606306 | 2808631617 | 297 |
| 36 | iso_pu_bacteria | 2808606368 | 2808885197 | 297 |
| 37 | iso_pu_bacteria | 2808606447 | 2809226979 | 297 |
| 38 | iso_pu_bacteria | 2821268502 | 2821269512 | 297 |
| 39 | iso_pu_bacteria | 2833709550 | 2833710418 | 297 |
| 40 | iso_pu_bacteria | 2852632344 | 2852633636 | 297 |
| 41 | iso_pu_bacteria | 2870628048 | 2870629856 | 297 |
| 42 | 3300006038 | Ga0075365_10270171 | Ga0075365_102701711 | 298 |
| 43 | 3300025938 | Ga0207704_10080739 | Ga0207704_100807391 | 298 |
| 44 | iso_pu_bacteria | 2966921586 | 2966922230 | 298 |
| 45 | 3300003578 | Ga0006562J51391_1059013 | Ga0006562J51391_10590138 | 299 |
| 46 | 3300003578 | Ga0006562J51391_1059016 | Ga0006562J51391_10590166 | 299 |
| 47 | 3300005539 | Ga0068853_100036144 | Ga0068853_1000361443 | 299 |
| 48 | 3300005563 | Ga0068855_100768663 | Ga0068855_1007686631 | 299 |
| 49 | 3300006038 | Ga0075365_10004250 | Ga0075365_100042505 | 299 |
| 50 | 3300006038 | Ga0075365_10014288 | Ga0075365_100142884 | 299 |
| 51 | 3300006042 | Ga0075368_10004555 | Ga0075368_100045552 | 299 |
| 52 | 3300006048 | Ga0075363_100004723 | Ga0075363_1000047234 | 299 |
| 53 | 3300006051 | Ga0075364_10019435 | Ga0075364_100194354 | 299 |
| 54 | 3300006051 | Ga0075364_10056413 | Ga0075364_100564132 | 299 |
| 55 | 3300006051 | Ga0075364_10204368 | Ga0075364_102043682 | 299 |
| 56 | 3300006178 | Ga0075367_10006259 | Ga0075367_100062592 | 299 |
| 57 | 3300006186 | Ga0075369_10003014 | Ga0075369_100030145 | 299 |
| 58 | 3300006353 | Ga0075370_10003789 | Ga0075370_100037895 | 299 |
| 59 | 3300009148 | Ga0105243_10012528 | Ga0105243_100125284 | 299 |
| 60 | 3300013105 | Ga0157369_10008437 | Ga0157369_100084374 | 299 |
| 61 | 3300013250 | Ga0171462_1001 | Ga0171462_1001107 | 299 |
| 62 | 3300013306 | Ga0163162_10006570 | Ga0163162_100065708 | 299 |
| 63 | 3300017792 | Ga0163161_10132400 | Ga0163161_101324001 | 299 |
| 64 | 3300025246 | Ga0209646_1000098 | Ga0209646_100009892 | 299 |
| 65 | 3300025728 | Ga0207655_1015062 | Ga0207655_10150623 | 299 |
| 66 | 3300025904 | Ga0207647_10021389 | Ga0207647_100213892 | 299 |
| 67 | 3300027866 | Ga0209813_10007044 | Ga0209813_100070443 | 299 |
| 68 | 3300031901 | Ga0307406_10000592 | Ga0307406_1000059220 | 299 |
| 69 | 3300031901 | Ga0307406_10140729 | Ga0307406_101407292 | 299 |
| 70 | 3300031995 | Ga0307409_100109719 | Ga0307409_1001097192 | 299 |
| 71 | 3300032002 | Ga0307416_100619565 | Ga0307416_1006195652 | 299 |
| 72 | 3300032004 | Ga0307414_10233889 | Ga0307414_102338892 | 299 |
| 73 | 3300032126 | Ga0307415_100023663 | Ga0307415_1000236633 | 299 |
| 74 | 3300041491 | Ga0451833_1325796 | Ga0451833_1325796_320_1222 | 299 |
| 75 | 3300044735 | Ga0466968_0016994 | Ga0466968_0016994_756_1664 | 299 |
| 76 | 3300046453 | Ga0495627_000831 | Ga0495627_000831_7709_8629 | 299 |
| 77 | 3300046615 | Ga0495656_0029421 | Ga0495656_0029421_443_1354 | 299 |
| 78 | 3300048904 | Ga0496101_0193180 | Ga0496101_0193180_457_1365 | 299 |
| 79 | 3300048906 | Ga0496103_0017310 | Ga0496103_0017310_1227_2135 | 299 |
| 80 | 3300048907 | Ga0496104_0057413 | Ga0496104_0057413_2190_3098 | 299 |
| 81 | 3300048908 | Ga0496105_0097188 | Ga0496105_0097188_468_1376 | 299 |
| 82 | 3300048908 | Ga0496105_0382234 | Ga0496105_0382234_115_1029 | 299 |
| 83 | 3300048912 | Ga0496109_0180272 | Ga0496109_0180272_375_1283 | 299 |
| 84 | 3300048913 | Ga0496110_0151936 | Ga0496110_0151936_546_1454 | 299 |
| 85 | 3300048914 | Ga0496111_0033603 | Ga0496111_0033603_670_1578 | 299 |
| 86 | 3300048915 | Ga0496112_0044186 | Ga0496112_0044186_1187_2095 | 299 |
| 87 | 3300048916 | Ga0496113_0072510 | Ga0496113_0072510_1087_1995 | 299 |
| 88 | 3300048917 | Ga0496114_0032618 | Ga0496114_0032618_1191_2105 | 299 |
| 89 | 3300048917 | Ga0496114_0038531 | Ga0496114_0038531_2250_3164 | 299 |
| 90 | 3300048917 | Ga0496114_0078598 | Ga0496114_0078598_596_1504 | 299 |
| 91 | 3300048917 | Ga0496114_0090166 | Ga0496114_0090166_286_1194 | 299 |
| 92 | 3300048918 | Ga0496115_0030172 | Ga0496115_0030172_2111_3019 | 299 |
| 93 | 3300048918 | Ga0496115_0086070 | Ga0496115_0086070_35_943 | 299 |
| 94 | 3300048919 | Ga0496116_0006712 | Ga0496116_0006712_445_1362 | 299 |
| 95 | 3300048920 | Ga0496117_0000028 | Ga0496117_0000028_324458_325357 | 299 |
| 96 | 3300048920 | Ga0496117_0005090 | Ga0496117_0005090_6711_7649 | 299 |
| 97 | 3300048920 | Ga0496117_0043679 | Ga0496117_0043679_717_1616 | 299 |
| 98 | 3300048921 | Ga0496118_0009754 | Ga0496118_0009754_8608_9525 | 299 |
| 99 | 3300048922 | Ga0496119_0002375 | Ga0496119_0002375_7575_8474 | 299 |
| 100 | 3300048922 | Ga0496119_0002505 | Ga0496119_0002505_6803_7720 | 299 |
| 101 | 3300048922 | Ga0496119_0004315 | Ga0496119_0004315_1656_2564 | 299 |
| 102 | 3300048922 | Ga0496119_0009032 | Ga0496119_0009032_1122_2021 | 299 |
| 103 | 3300048922 | Ga0496119_0012681 | Ga0496119_0012681_3847_4785 | 299 |
| 104 | 3300048923 | Ga0496120_0002231 | Ga0496120_0002231_17351_18250 | 299 |
| 105 | 3300048923 | Ga0496120_0006437 | Ga0496120_0006437_6725_7624 | 299 |
| 106 | 3300048923 | Ga0496120_0011275 | Ga0496120_0011275_2933_3850 | 299 |
| 107 | 3300048924 | Ga0496121_0133244 | Ga0496121_0133244_692_1603 | 299 |
| 108 | 3300048925 | Ga0496122_0000055 | Ga0496122_0000055_137047_137964 | 299 |
| 109 | 3300048925 | Ga0496122_0000377 | Ga0496122_0000377_10305_11243 | 299 |
| 110 | 3300048925 | Ga0496122_0002954 | Ga0496122_0002954_5495_6394 | 299 |
| 111 | 3300048925 | Ga0496122_0033372 | Ga0496122_0033372_2626_3537 | 299 |
| 112 | 3300048925 | Ga0496122_0058103 | Ga0496122_0058103_180_1106 | 299 |
| 113 | 3300048926 | Ga0496123_0000003 | Ga0496123_0000003_753872_754789 | 299 |
| 114 | 3300048926 | Ga0496123_0000879 | Ga0496123_0000879_28512_29450 | 299 |
| 115 | 3300048926 | Ga0496123_0005033 | Ga0496123_0005033_8076_8975 | 299 |
| 116 | 3300048926 | Ga0496123_0051732 | Ga0496123_0051732_155_1066 | 299 |
| 117 | 3300048927 | Ga0496124_0003330 | Ga0496124_0003330_7431_8348 | 299 |
| 118 | 3300048927 | Ga0496124_0006787 | Ga0496124_0006787_7947_8846 | 299 |
| 119 | 3300048927 | Ga0496124_0083214 | Ga0496124_0083214_647_1558 | 299 |
| 120 | 3300048928 | Ga0496125_0000120 | Ga0496125_0000120_173578_174525 | 299 |
| 121 | 3300048928 | Ga0496125_0001979 | Ga0496125_0001979_5388_6287 | 299 |
| 122 | 3300048928 | Ga0496125_0015830 | Ga0496125_0015830_5342_6259 | 299 |
| 123 | 3300048928 | Ga0496125_0018152 | Ga0496125_0018152_4425_5333 | 299 |
| 124 | 3300048928 | Ga0496125_0021979 | Ga0496125_0021979_3576_4514 | 299 |
| 125 | 3300048928 | Ga0496125_0038789 | Ga0496125_0038789_1569_2489 | 299 |
| 126 | 3300048929 | Ga0496126_0010765 | Ga0496126_0010765_3351_4250 | 299 |
| 127 | 3300048929 | Ga0496126_0011850 | Ga0496126_0011850_1022_1960 | 299 |
| 128 | 3300048929 | Ga0496126_0013773 | Ga0496126_0013773_1335_2252 | 299 |
| 129 | 3300048929 | Ga0496126_0259165 | Ga0496126_0259165_321_1232 | 299 |
| 130 | 3300049575 | Ga0501039_0044654 | Ga0501039_0044654_2207_3118 | 299 |
| 131 | 3300049586 | Ga0501070_0002401 | Ga0501070_0002401_6685_7611 | 299 |
| 132 | 3300050491 | nmdc:mga00v17_168945_c1 | nmdc:mga00v17_168945_c1_306_1211 | 299 |
| 133 | 3300050494 | nmdc:mga06z11_2214_c1 | nmdc:mga06z11_2214_c1_4587_5498 | 299 |
| 134 | 3300050495 | nmdc:mga04h51_1849_c1 | nmdc:mga04h51_1849_c1_978_1889 | 299 |
| 135 | 3300050496 | nmdc:mga07m45_3046_c1 | nmdc:mga07m45_3046_c1_4673_5584 | 299 |
| 136 | 3300050516 | nmdc:mga0sz30_16832_c1 | nmdc:mga0sz30_16832_c1_1721_2626 | 299 |
| 137 | 3300050516 | nmdc:mga0sz30_4575_c1 | nmdc:mga0sz30_4575_c1_3750_4661 | 299 |
| 138 | iso_pu_bacteria | 2643221542 | 2643734028 | 299 |
| 139 | iso_pu_bacteria | 2643221566 | 2643849519 | 299 |
| 140 | iso_pu_bacteria | 2643221597 | 2643996259 | 299 |
| 141 | iso_pu_bacteria | 2811994872 | 2812322585 | 299 |
| 142 | iso_pu_bacteria | 2857720070 | 2857720374 | 299 |
| 143 | iso_pu_bacteria | 2928090899 | 2928092539 | 299 |
| 144 | iso_pu_bacteria | 2984580707 | 2984583927 | 299 |
| 145 | iso_pu_bacteria | 8045830549 | 8045832553 | 299 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2hy1-assembly1.cif.gz_A-2 | crystal structure of rv0805 | 0.992 | 10 | 265 |
| 2hyo-assembly1.cif.gz_A-2 | crystal structure of rv0805 n97a mutant | 0.9911 | 10 | 265 |
| 2hy1-assembly1.cif.gz_A-2 | crystal structure of rv0805 | 0.9877 | 10 | 265 |
| 2hyo-assembly1.cif.gz_A-2 | crystal structure of rv0805 n97a mutant | 0.9867 | 10 | 265 |
| 2hyp-assembly1.cif.gz_A-2 | crystal structure of rv0805 d66a mutant | 0.9819 | 10 | 265 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 2hypA00 | Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases | 0.9819 | 10 | 265 | 3.60.21.10 |
| 2hypA00 | Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases | 0.9777 | 10 | 265 | 3.60.21.10 |
| 3ib7A00 | Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases | 0.9744 | 5 | 282 | 3.60.21.10 |
| 3ib7A00 | Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases | 0.916 | 5 | 282 | 3.60.21.10 |
| af_P0AEW4_8_273_3.60.21.10 | Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases | 0.8609 | 7 | 268 | 3.60.21.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A1P8U9T9-F1-model_v4 | Phosphodiesterase | 0.9981 | 5 | 299 |
GO:0004115
|
| AF-A0A1P8U9T9-F1-model_v4 | Phosphodiesterase | 0.9914 | 5 | 299 |
GO:0004115
|
| AF-A0A6P1FE91-F1-model_v4 | Phosphodiesterase | 0.9872 | 5 | 299 |
GO:0004115
|
| AF-A0A316BPJ0-F1-model_v4 | deleted | 0.9872 | 5 | 299 |
|
| AF-A0A506Y4R7-F1-model_v4 | Phosphodiesterase | 0.9849 | 4 | 299 |
GO:0004115
|
Predicted Structure (AlphaFold2)
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