F193170

General Info

Members Datasets Scaffolds Average Seq Length
144 116 288 250

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2515154155|2515852591
Length 235
Sequence RLTYDDRQRIAARLADGHSYAEIARALERPTSTVSREVTRNGGYDGYRADHAHRAAGRRARRSRVGLSSAPEATDPYERDRAAMRGFTERFVAMMVETGLPRMVARTLACFLTSDSTSVTAAELVERLQVSPASISKAVGYLENLQLVRRERDPRGRRERYVIDDDVWYRAWSASVRSIAMWADTARQGAGVLGAGTPAGDRLDEMATFFGLLGRDMAEAGERRRQGFVKERQRR

Samples

Sample ID Description Type Environment
1 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
2 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
3 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
4 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
5 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
6 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
7 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
8 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
9 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
10 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
11 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
12 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
13 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
14 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
15 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
16 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
17 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
18 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
19 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
20 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
21 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
22 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
23 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
24 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
25 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
26 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
27 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
28 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
29 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
30 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
31 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
32 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
33 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
34 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
35 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
36 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
37 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
38 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
39 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
40 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
41 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
42 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
43 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
44 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
45 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
46 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
47 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
48 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
49 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
50 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
51 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
52 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
53 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
54 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
55 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
56 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
57 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
58 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
59 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
60 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
61 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
62 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
63 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
64 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
65 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
66 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
67 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
68 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
69 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
70 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
71 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
72 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
73 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
74 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
75 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
76 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
77 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
78 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
79 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
80 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
81 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
82 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
83 2508501039 Frankia saprophytica CN3 Isolate Nodule
84 2558860280 Kutzneria sp. 744 Isolate Unclassified
85 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
86 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
87 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
88 2643221549 Agromyces sp. Root1464 Isolate Unclassified
89 2643221619 Agromyces sp. Root81 Isolate Unclassified
90 2643221647 Streptomyces sp. Root369 Isolate Unclassified
91 2687453737 Frankia sp. BMG5.36 Isolate Nodule
92 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
93 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
94 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
95 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
96 2808606394 Promicromonospora sp. C35 Isolate Unclassified
97 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
98 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
99 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
100 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
101 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
102 2867428634 Streptomyces sp. RP5T Isolate Unclassified
103 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
104 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
105 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
106 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
107 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
108 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
109 2954691527 Streptomyces sp. SAI-127 Isolate Rhizosphere
110 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
111 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
112 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
113 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
114 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
115 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule
116 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 75
Metatranscriptomes 0
Isolates 25

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.39
Nodule 2.78
Rhizoplane 0
Rhizosphere 75
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10034165 3300001990 Bacteria 1577
2 Ga0070661_100717359 3300005344 Bacteria 816
3 Ga0081455_10078776 3300005937 Bacteria 2707
4 Ga0081538_10000177 3300005981 Bacteria 69143
5 Ga0075430_100189242 3300006846 Bacteria 1711
6 Ga0099826_10147167 3300006948 Bacteria 1352
7 Ga0105246_10002232 3300011119 Bacteria 11683
8 Ga0207426_1021754 3300025302 Bacteria 2212
9 Ga0207647_10015714 3300025904 Bacteria 5183
10 Ga0207711_10602809 3300025941 Bacteria 1025
11 Ga0307515_10000218 3300028794 Bacteria 141810
12 Ga0307512_10032138 3300030522 Bacteria 4535
13 Ga0307513_10253469 3300031456 Bacteria 1555
14 Ga0307513_10282245 3300031456 Bacteria 1437
15 Ga0307509_10266954 3300031507 Bacteria 1482
16 Ga0307514_10008224 3300031649 Bacteria 8907
17 Ga0307514_10021158 3300031649 Bacteria 5304
18 Ga0307514_10212651 3300031649 Bacteria 1198
19 Ga0307516_10003172 3300031730 Bacteria 21396
20 Ga0307407_10399830 3300031903 Bacteria 985
21 Ga0307412_10586871 3300031911 Bacteria 942
22 Ga0307416_100051591 3300032002 Bacteria 3287
23 Ga0451835_0766336 3300041492 Bacteria 958
24 Ga0451853_3197387 3300041512 Bacteria 1257
25 Ga0439448_0036436 3300042005 Bacteria 1578
26 Ga0439449_0001559 3300042007 Bacteria 8978
27 Ga0439455_0001040 3300042012 Bacteria 4393
28 Ga0450903_002851 3300042138 Bacteria 3024
29 Ga0439458_0000094 3300042157 Bacteria 17181
30 Ga0439444_0040129 3300042437 Bacteria 916
31 Ga0466965_0157657 3300044683 Bacteria 1189
32 Ga0466966_0029771 3300044684 Bacteria 3549
33 Ga0466961_0008458 3300044693 Bacteria 6554
34 Ga0466963_0000556 3300044694 Bacteria 17582
35 Ga0466963_0575109 3300044694 Bacteria 796
36 Ga0466971_0002523 3300044719 Bacteria 7747
37 Ga0466970_0002615 3300044765 Bacteria 8683
38 Ga0466957_0004648 3300044842 Bacteria 7671
39 Ga0466959_0000712 3300045049 Bacteria 19444
40 Ga0466958_0002072 3300045836 Bacteria 9917
41 Ga0466967_0000862 3300045976 Bacteria 16136
42 Ga0466967_0112857 3300045976 Bacteria 2499
43 Ga0495592_0001461 3300046454 Bacteria 16419
44 Ga0495592_0041327 3300046454 Bacteria 3455
45 Ga0495603_0002938 3300046455 Bacteria 10078
46 Ga0495629_0006069 3300046459 Bacteria 8980
47 Ga0495629_0026140 3300046459 Bacteria 4148
48 Ga0495629_0033691 3300046459 Bacteria 3622
49 Ga0495629_0045357 3300046459 Bacteria 3084
50 Ga0495651_0002214 3300046462 Bacteria 15006
51 Ga0495651_0033853 3300046462 Bacteria 3984
52 Ga0495580_0168487 3300046472 Bacteria 1515
53 Ga0495605_0047778 3300046474 Bacteria 2098
54 Ga0495639_0049021 3300046475 Bacteria 1916
55 Ga0495664_0028379 3300046477 Bacteria 3268
56 Ga0495664_0226401 3300046477 Bacteria 1132
57 Ga0495594_0044365 3300046499 Bacteria 2438
58 Ga0495594_0106482 3300046499 Bacteria 1579
59 Ga0495583_0013108 3300046506 Bacteria 4646
60 Ga0495608_0037770 3300046511 Bacteria 3247
61 Ga0495618_0003267 3300046514 Bacteria 10152
62 Ga0495618_0078596 3300046514 Bacteria 2103
63 Ga0495620_0014392 3300046515 Bacteria 4021
64 Ga0495628_0001676 3300046516 Bacteria 20224
65 Ga0495628_0089897 3300046516 Bacteria 2377
66 Ga0495643_0004347 3300046522 Bacteria 9941
67 Ga0495648_0045065 3300046524 Bacteria 2747
68 Ga0495666_0069604 3300046526 Bacteria 1674
69 Ga0495652_0004392 3300046529 Bacteria 13484
70 Ga0495652_0009643 3300046529 Bacteria 8768
71 Ga0495640_0000204 3300046533 Bacteria 39439
72 Ga0495622_0073990 3300046557 Bacteria 1571
73 Ga0495668_0011779 3300046616 Bacteria 5214
74 Ga0495634_0010061 3300046642 Bacteria 6942
75 Ga0495635_0006461 3300046663 Bacteria 8174
76 Ga0495588_0021204 3300046674 Bacteria 3199
77 Ga0495657_0009362 3300046675 Bacteria 7430
78 Ga0495657_0012313 3300046675 Bacteria 6356
79 Ga0495623_0009280 3300046679 Bacteria 6387
80 Ga0495613_0001663 3300046689 Bacteria 16913
81 Ga0495613_0011623 3300046689 Bacteria 6543
82 Ga0495613_0013388 3300046689 Bacteria 6093
83 Ga0495613_0083493 3300046689 Bacteria 2319
84 Ga0495624_0030105 3300046690 Bacteria 3538
85 Ga0495624_0249928 3300046690 Bacteria 1072
86 Ga0495589_0044761 3300046794 Bacteria 2200
87 Ga0495589_0248546 3300046794 Bacteria 831
88 Ga0495581_0105088 3300047315 Bacteria 1641
89 Ga0495604_0002832 3300047317 Bacteria 13914
90 Ga0495604_0080618 3300047317 Bacteria 2438
91 Ga0495636_0006053 3300047318 Bacteria 4748
92 Ga0495676_0006932 3300047321 Bacteria 10407
93 Ga0495676_0015556 3300047321 Bacteria 6769
94 Ga0495676_0034101 3300047321 Bacteria 4274
95 Ga0495676_0045663 3300047321 Bacteria 3563
96 Ga0495680_0002437 3300047322 Bacteria 19036
97 Ga0495687_008187 3300047443 Bacteria 6024
98 Ga0495687_017867 3300047443 Bacteria 3521
99 Ga0495675_0064115 3300047444 Bacteria 2324
100 Ga0495685_015635 3300047447 Bacteria 2590
101 Ga0495685_019101 3300047447 Bacteria 2353
102 Ga0495602_0062138 3300048088 Bacteria 3242
103 Ga0495614_0006803 3300048089 Bacteria 5117
104 nmdc:mga0qj67_75482_c1 3300050509 Bacteria 2694
105 Ga0495601_0001601 3300053077 Bacteria 12490
106 Ga0495612_0066480 3300053078 Bacteria 1498
107 Ga0500600_0106818 3300053149 Bacteria 1467
108 Ga0466962_0012157 3300061719 Bacteria 4138
109 2515852591 2515154155 Bacteria 7985436
110 2508674087 2508501039 Bacteria 9978592
111 2559426250 2558860280 Bacteria 11429938
112 2585308816 2582581313 Bacteria 10042643
113 2616698030 2616644814 Bacteria 11555299
114 2623586467 2622736626 Bacteria 7181580
115 2643766339 2643221549 Bacteria 4042819
116 2644113206 2643221619 Bacteria 4158469
117 2644113624 2643221619 Bacteria 4158469
118 2644262302 2643221647 Bacteria 10741251
119 2689960124 2687453737 Bacteria 11203906
120 2738697699 2738541272 Bacteria 6848551
121 2739328254 2738543027 Bacteria 6409078
122 2786670631 2786546132 Bacteria 10419719
123 2808915796 2808606375 Bacteria 9466072
124 2809030375 2808606394 Bacteria 6248540
125 2835189090 2835188231 Bacteria 3476928
126 2862512983 2862507626 Bacteria 9425308
127 2867305975 2867302475 Bacteria 7087181
128 2867317931 2867312974 Bacteria 7058875
129 2867319627 2867319477 Bacteria 7069771
130 2867435305 2867428634 Bacteria 9590268
131 2884698845 2884693830 Bacteria 11273186
132 2895450112 2895442618 Bacteria 11027144
133 2919468970 2919468124 Bacteria 9133025
134 2954386213 2954380949 Bacteria 10050426
135 2954676953 2954673503 Bacteria 9685905
136 2954687205 2954682443 Bacteria 9862841
137 2954696851 2954691527 Bacteria 10720516
138 2954705285 2954701450 Bacteria 10834262
139 2966603105 2966598605 Bacteria 7676064
140 2996221940 2996221748 Bacteria 6799777
141 3006487855 3006486233 Bacteria 8157040
142 3006500945 3006493962 Bacteria 8825450
143 8055418088 8055412473 Bacteria 6257500
144 8056670479 8056667051 Bacteria 6953971
145 JGI24737J22298_10034165
146 Ga0070661_100717359
147 Ga0081455_10078776
148 Ga0081538_10000177
149 Ga0075430_100189242
150 Ga0099826_10147167
151 Ga0105246_10002232
152 Ga0207426_1021754
153 Ga0207647_10015714
154 Ga0207711_10602809
155 Ga0307515_10000218
156 Ga0307512_10032138
157 Ga0307513_10253469
158 Ga0307513_10282245
159 Ga0307509_10266954
160 Ga0307514_10008224
161 Ga0307514_10021158
162 Ga0307514_10212651
163 Ga0307516_10003172
164 Ga0307407_10399830
165 Ga0307412_10586871
166 Ga0307416_100051591
167 Ga0451835_0766336
168 Ga0451853_3197387
169 Ga0439448_0036436
170 Ga0439449_0001559
171 Ga0439455_0001040
172 Ga0450903_002851
173 Ga0439458_0000094
174 Ga0439444_0040129
175 Ga0466965_0157657
176 Ga0466966_0029771
177 Ga0466961_0008458
178 Ga0466963_0000556
179 Ga0466963_0575109
180 Ga0466971_0002523
181 Ga0466970_0002615
182 Ga0466957_0004648
183 Ga0466959_0000712
184 Ga0466958_0002072
185 Ga0466967_0000862
186 Ga0466967_0112857
187 Ga0495592_0001461
188 Ga0495592_0041327
189 Ga0495603_0002938
190 Ga0495629_0006069
191 Ga0495629_0026140
192 Ga0495629_0033691
193 Ga0495629_0045357
194 Ga0495651_0002214
195 Ga0495651_0033853
196 Ga0495580_0168487
197 Ga0495605_0047778
198 Ga0495639_0049021
199 Ga0495664_0028379
200 Ga0495664_0226401
201 Ga0495594_0044365
202 Ga0495594_0106482
203 Ga0495583_0013108
204 Ga0495608_0037770
205 Ga0495618_0003267
206 Ga0495618_0078596
207 Ga0495620_0014392
208 Ga0495628_0001676
209 Ga0495628_0089897
210 Ga0495643_0004347
211 Ga0495648_0045065
212 Ga0495666_0069604
213 Ga0495652_0004392
214 Ga0495652_0009643
215 Ga0495640_0000204
216 Ga0495622_0073990
217 Ga0495668_0011779
218 Ga0495634_0010061
219 Ga0495635_0006461
220 Ga0495588_0021204
221 Ga0495657_0009362
222 Ga0495657_0012313
223 Ga0495623_0009280
224 Ga0495613_0001663
225 Ga0495613_0011623
226 Ga0495613_0013388
227 Ga0495613_0083493
228 Ga0495624_0030105
229 Ga0495624_0249928
230 Ga0495589_0044761
231 Ga0495589_0248546
232 Ga0495581_0105088
233 Ga0495604_0002832
234 Ga0495604_0080618
235 Ga0495636_0006053
236 Ga0495676_0006932
237 Ga0495676_0015556
238 Ga0495676_0034101
239 Ga0495676_0045663
240 Ga0495680_0002437
241 Ga0495687_008187
242 Ga0495687_017867
243 Ga0495675_0064115
244 Ga0495685_015635
245 Ga0495685_019101
246 Ga0495602_0062138
247 Ga0495614_0006803
248 nmdc:mga0qj67_75482_c1
249 Ga0495601_0001601
250 Ga0495612_0066480
251 Ga0500600_0106818
252 Ga0466962_0012157
253 2515852591
254 2508674087
255 2559426250
256 2585308816
257 2616698030
258 2623586467
259 2643766339
260 2644113206
261 2644113624
262 2644262302
263 2689960124
264 2738697699
265 2739328254
266 2786670631
267 2808915796
268 2809030375
269 2835189090
270 2862512983
271 2867305975
272 2867317931
273 2867319627
274 2867435305
275 2884698845
276 2895450112
277 2919468970
278 2954386213
279 2954676953
280 2954687205
281 2954696851
282 2954705285
283 2966603105
284 2996221940
285 3006487855
286 3006500945
287 8055418088
288 8056670479

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13936

HTH_38

Helix-turn-helix domain

1

41

0.99

PF12802

MarR_2

MarR family

98

159

0.96

PF13384

HTH_23

Homeodomain-like domain

1

46

0.93

PF01047

MarR

MarR family

103

159

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
2hoe-assembly1.cif.gz_A crystal structure of n-acetylglucosamine kinase (tm1224) from thermotoga maritima at 2.46 a resolution 0.9382 123 169
4ija-assembly1.cif.gz_B structure of s. aureus methicillin resistance factor mecr2 0.9138 123 167
5zhy-assembly1.cif.gz_B structural characterization of the hcov-229e fusion core 0.8963 169 232
6s1k-assembly1.cif.gz_F e. coli core signaling unit, carrying qqqq receptor mutation 0.8836 169 233
2f2e-assembly1.cif.gz_A crystal structure of pa1607, a putative transcription factor 0.8814 125 169
ID Description Score Start End Superfamily
2hoeA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9387 123 168 1.10.10.10
af_Q58948_3_81_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9149 106 170 1.10.10.10
af_Q86JM3_2_62_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9129 108 165 1.10.10.10
af_Q57824_147_206_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9074 106 166 1.10.10.10
af_A0A0P0XQU3_172_252_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.8971 122 167 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A2P9IX85-F1-model_v4 deleted 0.9634 100 233
AF-A0A2P9IX85-F1-model_v4 deleted 0.9165 100 233
AF-A0A810M3J1-F1-model_v4 deleted 0.9153 84 175
AF-A0A840EMM4-F1-model_v4 DNA-binding transcriptional regulator GbsR (MarR family) 0.8575 82 234 GO:0003677
GO:0005737
AF-A0A2W2EPV6-F1-model_v4 Transcriptional regulator 0.8536 89 231 GO:0003677
GO:0003700

Map