F192991

General Info

Members Datasets Scaffolds Average Seq Length
144 90 128 307

Family's Representative Sequence

Representative Sequence 3300049703|Ga0501219_000237|Ga0501219_000237_3984_5012
Length 342
Sequence MDRLRQYRQRELQRKIKSIVNKIHYNIIQKKMDNPIVRIEKLSHRYTSSWAIRDINLEISSTGIVGLLGSNGAGKSTTMNILCGSLNQTEGNVFINGINLREQPELAKKQIGFLPQNPPLYMDLTVDEYLTYCAGLRLMPKETMKPAIKEAKERCGVDHFSNRLIRNLSGGYRQRVGIAQAIVHKPRLVVLDEPTNGLDPNQITEVRTLIREIATDRAVIFSSHILTEVQILCKEIKMIESGRIVFSDTMDAFNNYVEPHSLLMHLENPPSESELVQIPGVTKVDFLTERQVRVHFNGEREITETLVAASIQKGWRLQEISLDKSALDEIFKQLSNQTSLNN

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2738543023 Pedobacter sp. OK628 Isolate Unclassified
3 2818991444 Filimonas endophytica 3197 Isolate Unclassified
4 2821136567 Chitinophaga sancti 1232 Isolate Unclassified
5 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
6 2904467357 Chitinophaga sancti 3198 Isolate Unclassified
7 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
8 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
9 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
10 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
11 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere
12 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
13 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
14 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
15 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
16 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
17 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
18 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
19 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
24 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
25 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
26 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
27 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
28 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
29 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
30 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
35 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
36 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
37 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
38 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
39 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
40 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
41 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
52 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
53 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
54 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
55 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
56 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
57 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
58 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
59 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
60 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
61 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
62 3300041441 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_1 MetaG Metagenome Rhizoplane
63 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
64 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
65 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
66 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
67 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
68 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
69 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
70 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
71 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
72 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
73 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
74 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
75 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
76 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
77 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
78 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
79 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
80 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
81 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
82 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
83 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
84 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
85 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
86 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
87 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
88 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
89 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
90 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.89
Metatranscriptomes 0
Isolates 11.11

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 21.53
Nodule 0
Rhizoplane 0.69
Rhizosphere 47.92
Stem 0
Stem Tuber 0
Unclassified 29.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_949082 2162886007 Bacteria 1409
2 JGI25158J39367_1007417 3300002739 Bacteria 1547
3 rootH1_10157825 3300003316 Bacteria 1715
4 rootH2_10009467 3300003320 Bacteria 6821
5 rootH2_10019865 3300003320 Bacteria 9712
6 rootH2_10020240 3300003320 Bacteria 23790
7 rootH2_10049039 3300003320 Bacteria 28476
8 rootH2_10085396 3300003320 Bacteria 6107
9 rootH2_10098719 3300003320 Bacteria 21286
10 rootL2_10028507 3300003322 Bacteria 7269
11 rootL2_10073673 3300003322 Bacteria 10407
12 rootL2_10127908 3300003322 Bacteria 1963
13 rootL2_10127909 3300003322 Bacteria 2357
14 rootL2_10152640 3300003322 Bacteria 2072
15 rootL2_10312382 3300003322 Bacteria 7965
16 rootH1_10129925 3300003323 Bacteria 11999
17 Ga0055531_10000068 3300003794 Bacteria 112187
18 Ga0065714_10064683 3300005288 Bacteria 23819
19 Ga0065704_10070204 3300005289 Bacteria 85748
20 Ga0065704_10091736 3300005289 Bacteria 2697
21 Ga0070669_100093176 3300005353 Bacteria 2262
22 Ga0068857_100124727 3300005577 Bacteria 2320
23 Ga0105240_10000044 3300009093 Bacteria 250257
24 Ga0105240_10080571 3300009093 Bacteria 4003
25 Ga0105241_10005763 3300009174 Bacteria 9144
26 Ga0105237_10000326 3300009545 Bacteria 67087
27 Ga0105237_10040539 3300009545 Bacteria 4695
28 Ga0105237_10211791 3300009545 Bacteria 1938
29 Ga0105238_10003429 3300009551 Bacteria 15804
30 Ga0105249_10210496 3300009553 Bacteria 1908
31 Ga0105239_10000038 3300010375 Bacteria 205230
32 Ga0105239_10007935 3300010375 Bacteria 12134
33 Ga0157373_10020235 3300013100 Bacteria 4840
34 Ga0157371_10070908 3300013102 Bacteria 2467
35 Ga0157370_10080118 3300013104 Unclassified 3075
36 Ga0157370_10229271 3300013104 Bacteria 1719
37 Ga0157370_10395677 3300013104 Bacteria 1272
38 Ga0157369_10000007 3300013105 Bacteria 402562
39 Ga0163162_10000382 3300013306 Bacteria 40360
40 Ga0163163_10028843 3300014325 Bacteria 5334
41 Ga0163163_10100191 3300014325 Bacteria 2919
42 Ga0182008_10000452 3300014497 Bacteria 31325
43 Ga0182008_10001648 3300014497 Bacteria 14754
44 Ga0182008_10070506 3300014497 Unclassified 1719
45 Ga0182006_1000409 3300015261 Bacteria 34757
46 Ga0182006_1000904 3300015261 Bacteria 19844
47 Ga0182007_10000007 3300015262 Bacteria 376596
48 Ga0209436_106980 3300025208 Bacteria 2412
49 Ga0209130_1000700 3300025284 Bacteria 30009
50 Ga0207426_1000057 3300025302 Bacteria 369548
51 Ga0207426_1038933 3300025302 Unclassified 1494
52 Ga0209257_1000001 3300025304 Bacteria 2274655
53 Ga0207680_10013711 3300025903 Bacteria 4171
54 Ga0207654_10018683 3300025911 Bacteria 3642
55 Ga0207695_10000013 3300025913 Bacteria 821265
56 Ga0207695_10081239 3300025913 Bacteria 3280
57 Ga0207671_10000875 3300025914 Bacteria 38151
58 Ga0207671_10005395 3300025914 Bacteria 11791
59 Ga0207671_10063766 3300025914 Bacteria 2738
60 Ga0207694_10014562 3300025924 Bacteria 5930
61 Ga0207686_10354224 3300025934 Bacteria 1106
62 Ga0207674_10158924 3300026116 Bacteria 2215
63 Ga0268266_10000010 3300028379 Bacteria 1030233
64 Ga0268265_10148850 3300028380 Bacteria 1972
65 Ga0268264_10000094 3300028381 Bacteria 231083
66 Ga0307517_10010130 3300028786 Bacteria 13231
67 Ga0307515_10119507 3300028794 Bacteria 2997
68 Ga0307511_10000024 3300030521 Bacteria 112616
69 Ga0307511_10000341 3300030521 Bacteria 49636
70 Ga0307511_10000388 3300030521 Bacteria 46905
71 Ga0307511_10000614 3300030521 Bacteria 38191
72 Ga0307512_10181072 3300030522 Bacteria 1184
73 Ga0316181_1056771 3300030744 Bacteria 2317
74 Ga0307513_10168358 3300031456 Bacteria 2072
75 Ga0307509_10023492 3300031507 Bacteria 6919
76 Ga0307516_10004315 3300031730 Bacteria 17623
77 Ga0307516_10034311 3300031730 Bacteria 5099
78 Ga0307516_10136953 3300031730 Bacteria 2222
79 Ga0307414_10105221 3300032004 Bacteria 2133
80 Ga0307510_10001392 3300033180 Bacteria 26510
81 Ga0307510_10005124 3300033180 Bacteria 15574
82 Ga0395899_0057641 3300037312 Bacteria 2867
83 Ga0451787_081698 3300041441 Bacteria 1337
84 Ga0466960_0068842 3300044901 Bacteria 1757
85 Ga0466959_0007137 3300045049 Bacteria 7819
86 Ga0495627_005431 3300046453 Bacteria 5139
87 Ga0495638_0026230 3300046460 Bacteria 3779
88 Ga0495638_0083679 3300046460 Bacteria 1932
89 Ga0495606_0008937 3300046507 Bacteria 8579
90 Ga0495648_0011566 3300046524 Bacteria 6639
91 Ga0495633_0000283 3300046558 Bacteria 58257
92 Ga0495611_0146073 3300046648 Bacteria 1104
93 Ga0495672_0029085 3300047320 Bacteria 3485
94 Ga0495687_000001 3300047443 Bacteria 1215582
95 Ga0495686_0000039 3300047472 Bacteria 304821
96 Ga0495686_0000086 3300047472 Bacteria 197490
97 Ga0495686_0000128 3300047472 Bacteria 156223
98 Ga0495686_0000195 3300047472 Bacteria 113003
99 Ga0495686_0142290 3300047472 Bacteria 1415
100 Ga0496120_0147483 3300048923 Bacteria 1186
101 Ga0496121_0000026 3300048924 Bacteria 450157
102 Ga0501219_000237 3300049703 Bacteria 10513
103 Ga0501284_00012 3300050005 Bacteria 124103
104 Ga0501284_00080 3300050005 Bacteria 24773
105 Ga0500578_0000042 3300053086 Bacteria 129410
106 Ga0500578_0032989 3300053086 Bacteria 3329
107 Ga0500644_0002667 3300053088 Bacteria 4456
108 Ga0500583_0000197 3300053092 Bacteria 23017
109 Ga0500583_0001354 3300053092 Bacteria 7015
110 Ga0500583_0006658 3300053092 Bacteria 3996
111 Ga0500651_0000126 3300053093 Bacteria 47037
112 Ga0500650_0089926 3300053098 Bacteria 1437
113 Ga0500556_0097041 3300053104 Bacteria 1132
114 Ga0500562_000028 3300053108 Bacteria 95758
115 Ga0500562_013912 3300053108 Unclassified 2058
116 Ga0500562_028574 3300053108 Bacteria 1466
117 Ga0500642_0048098 3300053130 Bacteria 1872
118 Ga0500568_0015195 3300053139 Bacteria 3451
119 Ga0500604_0003344 3300053151 Bacteria 4313
120 Ga0500622_0000040 3300053156 Bacteria 170371
121 Ga0500622_0000224 3300053156 Bacteria 58882
122 Ga0500622_0001876 3300053156 Bacteria 15870
123 Ga0500622_0002484 3300053156 Bacteria 13266
124 Ga0500622_0017494 3300053156 Bacteria 3814
125 Ga0500622_0020454 3300053156 Bacteria 3513
126 Ga0500622_0122828 3300053156 Unclassified 1257
127 Ga0500639_153720 3300053163 Bacteria 1057
128 Ga0500636_0028251 3300053177 Bacteria 3314

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300003322 rootL2_10073673 rootL2_100736736 278
2 3300009093 Ga0105240_10000044 Ga0105240_100000448 281
3 3300009174 Ga0105241_10005763 Ga0105241_100057633 281
4 3300009545 Ga0105237_10000326 Ga0105237_1000032625 281
5 3300009551 Ga0105238_10003429 Ga0105238_100034294 281
6 3300010375 Ga0105239_10007935 Ga0105239_100079353 281
7 3300025911 Ga0207654_10018683 Ga0207654_100186832 281
8 3300025913 Ga0207695_10000013 Ga0207695_10000013481 281
9 3300025914 Ga0207671_10000875 Ga0207671_100008757 281
10 3300025924 Ga0207694_10014562 Ga0207694_100145622 281
11 3300047472 Ga0495686_0142290 Ga0495686_0142290_525_1370 281
12 3300053156 Ga0500622_0000224 Ga0500622_0000224_116_961 281
13 3300013104 Ga0157370_10395677 Ga0157370_103956771 282
14 3300014497 Ga0182008_10070506 Ga0182008_100705062 282
15 3300045049 Ga0466959_0007137 Ga0466959_0007137_869_1726 282
16 3300053104 Ga0500556_0097041 Ga0500556_0097041_245_1099 282
17 3300047472 Ga0495686_0000195 Ga0495686_0000195_104186_105067 291
18 iso_pu_bacteria 2818991444 2819589148 302
19 iso_pu_bacteria 2896109856 2896112190 302
20 iso_pu_bacteria 2929154850 2929154872 302
21 iso_pu_bacteria 2929154850 2929158610 302
22 iso_pu_bacteria 2929177148 2929182216 302
23 iso_pu_bacteria 2738543023 2739301763 303
24 iso_pu_bacteria 2738543023 2739303636 303
25 iso_pu_bacteria 2818991444 2819591103 303
26 iso_pu_bacteria 2821136567 2821139825 303
27 iso_pu_bacteria 2821136567 2821143011 303
28 iso_pu_bacteria 2904467357 2904470734 303
29 iso_pu_bacteria 2904467357 2904473423 303
30 iso_pu_bacteria 2929177148 2929181630 303
31 iso_pu_bacteria 2929239360 2929241983 303
32 iso_pu_bacteria 2945977869 2945984046 303
33 iso_pu_bacteria 2946013367 2946016562 303
34 3300013102 Ga0157371_10070908 Ga0157371_100709082 305
35 3300025903 Ga0207680_10013711 Ga0207680_100137112 305
36 3300050005 Ga0501284_00080 Ga0501284_00080_20081_20998 305
37 3300002739 JGI25158J39367_1007417 JGI25158J39367_10074172 306
38 3300003320 rootH2_10009467 rootH2_100094673 306
39 3300003320 rootH2_10019865 rootH2_100198659 306
40 3300003320 rootH2_10098719 rootH2_100987196 306
41 3300003322 rootL2_10152640 rootL2_101526402 306
42 3300003794 Ga0055531_10000068 Ga0055531_1000006885 306
43 3300005288 Ga0065714_10064683 Ga0065714_100646837 306
44 3300005289 Ga0065704_10070204 Ga0065704_1007020469 306
45 3300009093 Ga0105240_10080571 Ga0105240_100805713 306
46 3300009545 Ga0105237_10211791 Ga0105237_102117912 306
47 3300009553 Ga0105249_10210496 Ga0105249_102104962 306
48 3300013100 Ga0157373_10020235 Ga0157373_100202352 306
49 3300013104 Ga0157370_10080118 Ga0157370_100801182 306
50 3300013105 Ga0157369_10000007 Ga0157369_10000007314 306
51 3300013306 Ga0163162_10000382 Ga0163162_1000038220 306
52 3300014325 Ga0163163_10100191 Ga0163163_101001912 306
53 3300015261 Ga0182006_1000409 Ga0182006_100040913 306
54 3300015262 Ga0182007_10000007 Ga0182007_10000007174 306
55 3300025208 Ga0209436_106980 Ga0209436_1069802 306
56 3300025284 Ga0209130_1000700 Ga0209130_100070011 306
57 3300025302 Ga0207426_1000057 Ga0207426_1000057277 306
58 3300025304 Ga0209257_1000001 Ga0209257_1000001537 306
59 3300025913 Ga0207695_10081239 Ga0207695_100812392 306
60 3300028381 Ga0268264_10000094 Ga0268264_1000009479 306
61 3300030521 Ga0307511_10000614 Ga0307511_100006144 306
62 3300030522 Ga0307512_10181072 Ga0307512_101810721 306
63 3300031456 Ga0307513_10168358 Ga0307513_101683582 306
64 3300031507 Ga0307509_10023492 Ga0307509_100234922 306
65 3300031730 Ga0307516_10136953 Ga0307516_101369532 306
66 3300033180 Ga0307510_10001392 Ga0307510_1000139213 306
67 3300046453 Ga0495627_005431 Ga0495627_005431_1132_2061 306
68 3300046524 Ga0495648_0011566 Ga0495648_0011566_4650_5576 306
69 3300046558 Ga0495633_0000283 Ga0495633_0000283_32939_33868 306
70 3300047320 Ga0495672_0029085 Ga0495672_0029085_593_1516 306
71 3300047443 Ga0495687_000001 Ga0495687_000001_422106_423032 306
72 3300048923 Ga0496120_0147483 Ga0496120_0147483_43_963 306
73 3300048924 Ga0496121_0000026 Ga0496121_0000026_122091_123011 306
74 3300053086 Ga0500578_0000042 Ga0500578_0000042_27071_28006 306
75 3300053092 Ga0500583_0001354 Ga0500583_0001354_1094_2020 306
76 3300053130 Ga0500642_0048098 Ga0500642_0048098_884_1810 306
77 3300053139 Ga0500568_0015195 Ga0500568_0015195_1687_2607 306
78 3300053151 Ga0500604_0003344 Ga0500604_0003344_2800_3726 306
79 3300053156 Ga0500622_0000040 Ga0500622_0000040_123000_123926 306
80 3300053156 Ga0500622_0001876 Ga0500622_0001876_6685_7611 306
81 3300053156 Ga0500622_0002484 Ga0500622_0002484_10635_11564 306
82 3300053163 Ga0500639_153720 Ga0500639_153720_88_1023 306
83 3300053177 Ga0500636_0028251 Ga0500636_0028251_1884_2819 306
84 2162886007 SwRhRL2b_contig_949082 SwRhRL2b_0446.00004520 307
85 3300003316 rootH1_10157825 rootH1_101578252 307
86 3300003320 rootH2_10020240 rootH2_100202401 307
87 3300003320 rootH2_10049039 rootH2_100490395 307
88 3300003320 rootH2_10085396 rootH2_100853962 307
89 3300003322 rootL2_10028507 rootL2_100285074 307
90 3300003322 rootL2_10127908 rootL2_101279082 307
91 3300003322 rootL2_10127909 rootL2_101279092 307
92 3300003322 rootL2_10312382 rootL2_103123825 307
93 3300003323 rootH1_10129925 rootH1_101299257 307
94 3300005289 Ga0065704_10091736 Ga0065704_100917362 307
95 3300005353 Ga0070669_100093176 Ga0070669_1000931762 307
96 3300005577 Ga0068857_100124727 Ga0068857_1001247272 307
97 3300009545 Ga0105237_10040539 Ga0105237_100405391 307
98 3300010375 Ga0105239_10000038 Ga0105239_10000038119 307
99 3300013104 Ga0157370_10229271 Ga0157370_102292712 307
100 3300014325 Ga0163163_10028843 Ga0163163_100288434 307
101 3300014497 Ga0182008_10000452 Ga0182008_1000045214 307
102 3300014497 Ga0182008_10001648 Ga0182008_100016484 307
103 3300015261 Ga0182006_1000904 Ga0182006_10009047 307
104 3300025302 Ga0207426_1038933 Ga0207426_10389332 307
105 3300025914 Ga0207671_10005395 Ga0207671_100053959 307
106 3300025914 Ga0207671_10063766 Ga0207671_100637661 307
107 3300025934 Ga0207686_10354224 Ga0207686_103542242 307
108 3300026116 Ga0207674_10158924 Ga0207674_101589242 307
109 3300028379 Ga0268266_10000010 Ga0268266_10000010597 307
110 3300028380 Ga0268265_10148850 Ga0268265_101488502 307
111 3300028786 Ga0307517_10010130 Ga0307517_100101303 307
112 3300028794 Ga0307515_10119507 Ga0307515_101195072 307
113 3300030521 Ga0307511_10000024 Ga0307511_1000002419 307
114 3300030521 Ga0307511_10000341 Ga0307511_100003417 307
115 3300030521 Ga0307511_10000388 Ga0307511_100003883 307
116 3300030744 Ga0316181_1056771 Ga0316181_10567712 307
117 3300031730 Ga0307516_10004315 Ga0307516_100043153 307
118 3300031730 Ga0307516_10034311 Ga0307516_100343112 307
119 3300032004 Ga0307414_10105221 Ga0307414_101052212 307
120 3300033180 Ga0307510_10005124 Ga0307510_100051245 307
121 3300037312 Ga0395899_0057641 Ga0395899_0057641_1833_2762 307
122 3300041441 Ga0451787_081698 Ga0451787_081698_120_1103 307
123 3300044901 Ga0466960_0068842 Ga0466960_0068842_678_1613 307
124 3300046460 Ga0495638_0026230 Ga0495638_0026230_2748_3695 307
125 3300046460 Ga0495638_0083679 Ga0495638_0083679_30_971 307
126 3300046507 Ga0495606_0008937 Ga0495606_0008937_2931_3863 307
127 3300046648 Ga0495611_0146073 Ga0495611_0146073_133_1062 307
128 3300047472 Ga0495686_0000039 Ga0495686_0000039_231858_232793 307
129 3300047472 Ga0495686_0000086 Ga0495686_0000086_102319_103245 307
130 3300047472 Ga0495686_0000128 Ga0495686_0000128_28457_29392 307
131 3300049703 Ga0501219_000237 Ga0501219_000237_3984_5012 307
132 3300050005 Ga0501284_00012 Ga0501284_00012_90864_91892 307
133 3300053086 Ga0500578_0032989 Ga0500578_0032989_1794_2720 307
134 3300053088 Ga0500644_0002667 Ga0500644_0002667_3273_4202 307
135 3300053092 Ga0500583_0000197 Ga0500583_0000197_21494_22423 307
136 3300053092 Ga0500583_0006658 Ga0500583_0006658_2873_3802 307
137 3300053093 Ga0500651_0000126 Ga0500651_0000126_38634_39563 307
138 3300053098 Ga0500650_0089926 Ga0500650_0089926_473_1402 307
139 3300053108 Ga0500562_000028 Ga0500562_000028_34509_35441 307
140 3300053108 Ga0500562_013912 Ga0500562_013912_117_1049 307
141 3300053108 Ga0500562_028574 Ga0500562_028574_461_1390 307
142 3300053156 Ga0500622_0017494 Ga0500622_0017494_2687_3634 307
143 3300053156 Ga0500622_0020454 Ga0500622_0020454_1842_2771 307
144 3300053156 Ga0500622_0122828 Ga0500622_0122828_246_1175 307

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

52

196

0.97

PF13304

AAA_21

AAA domain, putative AbiEii toxin, Type IV TA system

163

229

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
6z4w-assembly1.cif.gz_A ftse structure from streptococcus pneumoniae in complex with adp (space group p 1) 0.9435 4 219
3c41-assembly1.cif.gz_K abc protein artp in complex with amp-pnp/mg2+ 0.9399 4 222
1vpl-assembly1.cif.gz_A-2 crystal structure of abc transporter atp-binding protein (tm0544) from thermotoga maritima at 2.10 a resolution 0.9352 5 223
2pcj-assembly1.cif.gz_B crystal structure of abc transporter (aq_297) from aquifex aeolicus vf5 0.9349 4 218
4mki-assembly1.cif.gz_B cobalt transporter atp-binding subunit 0.9345 5 223
ID Description Score Start End Superfamily
af_Q8T5Z7_540_794_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9768 3 223 3.40.50.300
af_Q8T6J0_514_774_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9759 2 223 3.40.50.300
af_A1ZBS3_1241_1472_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9651 6 223 3.40.50.300
af_P36879_1_236_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9593 3 222 3.40.50.300
af_A4I2P8_1496_1744_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9557 3 223 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A2V6WXH7-F1-model_v4 AAA+ ATPase domain-containing protein 0.9749 1 167 GO:0005524
GO:0016887
AF-A0A2W7B2T3-F1-model_v4 Multidrug ABC transporter ATP-binding protein 0.9724 4 208 GO:0005524
GO:0016887
AF-A0A2V6WXH7-F1-model_v4 AAA+ ATPase domain-containing protein 0.9692 1 167 GO:0005524
GO:0016887
AF-A0A3R8R1F7-F1-model_v4 deleted 0.9653 6 98
AF-A0A1B2CTP3-F1-model_v4 ABC transporter ATP-binding protein 0.9616 3 219 GO:0005524
GO:0016887

Feature Viewer

pLDDT pTM Quality
89.44 0.76 High
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Predicted Structure (AlphaFold2)

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