F191338

General Info

Members Datasets Scaffolds Average Seq Length
144 101 144 207

Family's Representative Sequence

Representative Sequence 3300006042|Ga0075368_10024319|Ga0075368_100243195
Length 239
Sequence VKDSYSDHKVKNDVRHQLRGYPIISDQISREALEVVCRQLENTLQKDVPGGVVELGCYIGTTSLFIRRILDAHTGHSESHGESAAREFHAYDSFEGLPEKSPQDANAAGIDFEAGKLYVSKKEFLQQFRTAKLMPPITHKGWFSELGPSDMPSQIAFAFLDGDFYQSIIDSLRLVWPLLADEGCIIIDDYKRETLPGVERAIRDFTQNKPVTIREEQNLAILALATGDRTNDVRKGKRR

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
27 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
28 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
29 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
30 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
31 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
35 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
36 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
37 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300009987 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
43 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
44 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
45 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
46 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
47 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
69 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
70 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
72 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
73 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
74 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
75 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
76 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
77 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
78 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
79 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
80 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
81 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
82 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
83 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
84 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
85 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
86 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
87 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
88 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
89 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
90 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
91 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
92 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
93 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
94 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
95 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
96 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
97 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
98 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
99 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
100 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
101 3300053732 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 27.08
Nodule 0
Rhizoplane 0.69
Rhizosphere 69.44
Stem 0
Stem Tuber 0
Unclassified 2.78

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10164640 3300003320 Bacteria 5318
2 rootH2_10284495 3300003320 Bacteria 1343
3 rootL2_10311190 3300003322 Bacteria 1956
4 rootH1_10231202 3300003323 Bacteria 2582
5 JGI25405J52794_10070671 3300003911 Unclassified 761
6 Ga0070658_10000071 3300005327 Bacteria 98592
7 Ga0070658_10005957 3300005327 Bacteria 9892
8 Ga0070658_10057375 3300005327 Bacteria 3167
9 Ga0070676_10092461 3300005328 Unclassified 1855
10 Ga0070682_100022558 3300005337 Bacteria 3730
11 Ga0070682_100206174 3300005337 Unclassified 1390
12 Ga0070660_100019688 3300005339 Unclassified 4949
13 Ga0070692_10148731 3300005345 Unclassified 1332
14 Ga0070674_100004587 3300005356 Bacteria 7895
15 Ga0070674_100665533 3300005356 Unclassified 886
16 Ga0070673_100000436 3300005364 Bacteria 22037
17 Ga0070659_100509592 3300005366 Bacteria 1026
18 Ga0070678_100002479 3300005456 Bacteria 10109
19 Ga0068867_100033648 3300005459 Bacteria 3713
20 Ga0070685_10003889 3300005466 Bacteria 7550
21 Ga0070685_10010508 3300005466 Unclassified 4812
22 Ga0070679_100023334 3300005530 Bacteria 6054
23 Ga0068853_100000995 3300005539 Bacteria 19948
24 Ga0068855_100060720 3300005563 Bacteria 4420
25 Ga0070664_100265739 3300005564 Bacteria 1544
26 Ga0068857_100000011 3300005577 Bacteria 106771
27 Ga0068857_100447507 3300005577 Bacteria 1207
28 Ga0068857_100752704 3300005577 Unclassified 928
29 Ga0068856_100032993 3300005614 Bacteria 5071
30 Ga0068856_100098475 3300005614 Bacteria 2914
31 Ga0068856_100719711 3300005614 Bacteria 1018
32 Ga0068852_100874001 3300005616 Bacteria 915
33 Ga0068863_100158641 3300005841 Bacteria 2166
34 Ga0068860_101519249 3300005843 Unclassified 691
35 Ga0081455_10000003 3300005937 Bacteria 367763
36 Ga0075365_10000040 3300006038 Bacteria 47942
37 Ga0075368_10024319 3300006042 Bacteria 2320
38 Ga0075364_10002205 3300006051 Bacteria 10921
39 Ga0075364_10005562 3300006051 Bacteria 7343
40 Ga0075364_10016719 3300006051 Unclassified 4568
41 Ga0075364_10024968 3300006051 Unclassified 3801
42 Ga0075362_10171573 3300006177 Bacteria 1048
43 Ga0075366_10000113 3300006195 Bacteria 33132
44 Ga0075366_10000890 3300006195 Bacteria 14434
45 Ga0075366_10002601 3300006195 Bacteria 9279
46 Ga0097621_100000001 3300006237 Bacteria 632268
47 Ga0068871_100000001 3300006358 Bacteria 215987
48 Ga0068865_100087803 3300006881 Bacteria 2248
49 Ga0105240_10000003 3300009093 Bacteria 1183681
50 Ga0105245_10000155 3300009098 Bacteria 64286
51 Ga0105245_10001407 3300009098 Bacteria 21814
52 Ga0105245_10051996 3300009098 Bacteria 3673
53 Ga0105243_10000001 3300009148 Bacteria 1156578
54 Ga0105242_10000002 3300009176 Bacteria 262559
55 Ga0105238_10286215 3300009551 Bacteria 1630
56 Ga0105030_100324 3300009987 Bacteria 4171
57 Ga0105239_10034476 3300010375 Bacteria 5558
58 Ga0105239_10163476 3300010375 Bacteria 2488
59 Ga0157369_10029624 3300013105 Bacteria 6046
60 Ga0157374_10000317 3300013296 Bacteria 44873
61 Ga0157374_10000926 3300013296 Bacteria 25525
62 Ga0157378_10023146 3300013297 Bacteria 5467
63 Ga0157378_10259830 3300013297 Bacteria 1665
64 Ga0157372_10000843 3300013307 Bacteria 33262
65 Ga0157377_10160882 3300014745 Unclassified 1396
66 Ga0157376_10000007 3300014969 Bacteria 368004
67 Ga0207645_10100776 3300025907 Unclassified 1863
68 Ga0207705_10000065 3300025909 Bacteria 137123
69 Ga0207705_10025831 3300025909 Bacteria 4191
70 Ga0207705_10072409 3300025909 Bacteria 2499
71 Ga0207707_10006236 3300025912 Bacteria 10414
72 Ga0207695_10000005 3300025913 Bacteria 1196715
73 Ga0207671_10287928 3300025914 Bacteria 1297
74 Ga0207657_10086711 3300025919 Bacteria 2620
75 Ga0207652_10011820 3300025921 Bacteria 7044
76 Ga0207694_10274285 3300025924 Bacteria 1384
77 Ga0207687_10000791 3300025927 Bacteria 21335
78 Ga0207687_10034783 3300025927 Unclassified 3423
79 Ga0207687_10149011 3300025927 Bacteria 1783
80 Ga0207686_10000001 3300025934 Bacteria 1169580
81 Ga0207709_10000002 3300025935 Bacteria 1171536
82 Ga0207669_10001530 3300025937 Bacteria 9858
83 Ga0207689_10195323 3300025942 Bacteria 1670
84 Ga0207679_10235559 3300025945 Bacteria 1548
85 Ga0207667_10047631 3300025949 Bacteria 4536
86 Ga0207651_10000247 3300025960 Bacteria 23298
87 Ga0207702_10024275 3300026078 Bacteria 5030
88 Ga0207702_10046089 3300026078 Bacteria 3669
89 Ga0207702_11264909 3300026078 Bacteria 732
90 Ga0207648_10048600 3300026089 Bacteria 3713
91 Ga0207674_10000001 3300026116 Bacteria 616581
92 Ga0207674_10053684 3300026116 Bacteria 4106
93 Ga0207674_10663655 3300026116 Unclassified 1007
94 Ga0207683_10006347 3300026121 Bacteria 10126
95 Ga0209983_1011185 3300027665 Bacteria 1837
96 Ga0209813_10005001 3300027866 Bacteria 3200
97 Ga0209974_10004256 3300027876 Bacteria 5107
98 Ga0268266_10001121 3300028379 Bacteria 33420
99 Ga0268266_10244817 3300028379 Unclassified 1656
100 Ga0265337_1019113 3300028556 Unclassified 2165
101 Ga0265334_10000025 3300028573 Bacteria 117961
102 Ga0265338_10000381 3300028800 Bacteria 79305
103 Ga0265338_10001823 3300028800 Bacteria 33421
104 Ga0265320_10173104 3300031240 Bacteria 969
105 Ga0265340_10000101 3300031247 Bacteria 41410
106 Ga0265327_10001670 3300031251 Bacteria 26672
107 Ga0265327_10205313 3300031251 Bacteria 891
108 Ga0265314_10225493 3300031711 Bacteria 1091
109 Ga0265342_10110263 3300031712 Bacteria 1558
110 Ga0395900_0065359 3300037418 Unclassified 3737
111 Ga0395905_0002200 3300037471 Bacteria 22030
112 Ga0395901_0023279 3300038443 Bacteria 6350
113 Ga0395901_0029741 3300038443 Bacteria 5625
114 Ga0466967_0574420 3300045976 Unclassified 1111
115 Ga0495671_0303835 3300046692 Unclassified 767
116 Ga0496112_0096948 3300048915 Bacteria 2919
117 nmdc:mga03683_180777_c1 3300050489 Unclassified 962
118 nmdc:mga03683_33154_c1 3300050489 Bacteria 1049
119 nmdc:mga00v17_120508_c1 3300050491 Bacteria 1670
120 nmdc:mga00v17_13075_c1 3300050491 Unclassified 4599
121 nmdc:mga00v17_1551_c1 3300050491 Bacteria 11996
122 nmdc:mga00v17_175292_c1 3300050491 Unclassified 1383
123 nmdc:mga0yw44_163710_c1 3300050492 Bacteria 1457
124 nmdc:mga0yw44_2_c1 3300050492 Bacteria 586884
125 nmdc:mga0yw44_765430_c1 3300050492 Unclassified 656
126 nmdc:mga0k408_849_c1 3300050493 Bacteria 16828
127 nmdc:mga0k408_86_c3 3300050493 Bacteria 30584
128 nmdc:mga06z11_131600_c1 3300050494 Bacteria 1405
129 nmdc:mga04h51_5434_c1 3300050495 Bacteria 3250
130 Ga0500644_0000842 3300053088 Bacteria 10257
131 Ga0500644_0005358 3300053088 Unclassified 3237
132 Ga0500646_0003786 3300053090 Bacteria 3866
133 Ga0500583_0148287 3300053092 Unclassified 1167
134 Ga0500651_0000193 3300053093 Bacteria 38970
135 Ga0500651_0000200 3300053093 Bacteria 38124
136 Ga0500651_0001039 3300053093 Bacteria 13715
137 Ga0500650_0000001 3300053098 Bacteria 818797
138 Ga0500562_025406 3300053108 Bacteria 1550
139 Ga0500594_0000001 3300053118 Bacteria 1178472
140 Ga0500655_003512 3300053133 Bacteria 2831
141 Ga0500577_0000577 3300053142 Bacteria 9467
142 Ga0500577_0000638 3300053142 Bacteria 8990
143 Ga0500579_000457 3300053143 Bacteria 23670
144 Ga0500656_014728 3300053732 Bacteria 908

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005337 Ga0070682_100022558 Ga0070682_1000225585 176
2 3300046692 Ga0495671_0303835 Ga0495671_0303835_205_756 182
3 3300028800 Ga0265338_10000381 Ga0265338_1000038146 195
4 3300031712 Ga0265342_10110263 Ga0265342_101102634 195
5 3300013307 Ga0157372_10000843 Ga0157372_1000084316 196
6 3300005843 Ga0068860_101519249 Ga0068860_1015192491 199
7 3300005564 Ga0070664_100265739 Ga0070664_1002657392 200
8 3300025945 Ga0207679_10235559 Ga0207679_102355591 200
9 3300003323 rootH1_10231202 rootH1_102312023 201
10 3300005327 Ga0070658_10005957 Ga0070658_1000595710 201
11 3300005327 Ga0070658_10057375 Ga0070658_100573754 201
12 3300006051 Ga0075364_10002205 Ga0075364_1000220513 201
13 3300006051 Ga0075364_10005562 Ga0075364_1000556210 201
14 3300013105 Ga0157369_10029624 Ga0157369_100296245 201
15 3300025909 Ga0207705_10072409 Ga0207705_100724093 201
16 3300028556 Ga0265337_1019113 Ga0265337_10191132 201
17 3300028573 Ga0265334_10000025 Ga0265334_1000002534 201
18 3300028800 Ga0265338_10001823 Ga0265338_1000182326 201
19 3300031240 Ga0265320_10173104 Ga0265320_101731042 201
20 3300031247 Ga0265340_10000101 Ga0265340_100001014 201
21 3300031251 Ga0265327_10205313 Ga0265327_102053132 201
22 3300031711 Ga0265314_10225493 Ga0265314_102254932 201
23 3300050491 nmdc:mga00v17_1551_c1 nmdc:mga00v17_1551_c1_739_1344 201
24 3300053088 Ga0500644_0005358 Ga0500644_0005358_207_812 201
25 3300053090 Ga0500646_0003786 Ga0500646_0003786_2705_3310 201
26 3300053092 Ga0500583_0148287 Ga0500583_0148287_174_779 201
27 3300053093 Ga0500651_0000200 Ga0500651_0000200_16863_17468 201
28 3300053098 Ga0500650_0000001 Ga0500650_0000001_740757_741362 201
29 3300053108 Ga0500562_025406 Ga0500562_025406_315_920 201
30 3300053118 Ga0500594_0000001 Ga0500594_0000001_222594_223199 201
31 3300053133 Ga0500655_003512 Ga0500655_003512_1524_2129 201
32 3300053142 Ga0500577_0000638 Ga0500577_0000638_4995_5600 201
33 3300053143 Ga0500579_000457 Ga0500579_000457_9018_9623 201
34 3300053732 Ga0500656_014728 Ga0500656_014728_265_870 201
35 3300005356 Ga0070674_100004587 Ga0070674_1000045872 202
36 3300005366 Ga0070659_100509592 Ga0070659_1005095922 202
37 3300005466 Ga0070685_10003889 Ga0070685_100038894 202
38 3300005539 Ga0068853_100000995 Ga0068853_1000009959 202
39 3300025937 Ga0207669_10001530 Ga0207669_100015308 202
40 3300028379 Ga0268266_10001121 Ga0268266_1000112122 202
41 3300031251 Ga0265327_10001670 Ga0265327_1000167011 202
42 3300037471 Ga0395905_0002200 Ga0395905_0002200_5910_6518 202
43 3300053093 Ga0500651_0001039 Ga0500651_0001039_12517_13125 202
44 3300005327 Ga0070658_10000071 Ga0070658_1000007118 203
45 3300005328 Ga0070676_10092461 Ga0070676_100924611 203
46 3300005337 Ga0070682_100206174 Ga0070682_1002061742 203
47 3300005339 Ga0070660_100019688 Ga0070660_1000196887 203
48 3300005356 Ga0070674_100665533 Ga0070674_1006655331 203
49 3300005364 Ga0070673_100000436 Ga0070673_10000043614 203
50 3300005456 Ga0070678_100002479 Ga0070678_1000024797 203
51 3300005459 Ga0068867_100033648 Ga0068867_1000336482 203
52 3300005466 Ga0070685_10010508 Ga0070685_100105087 203
53 3300005614 Ga0068856_100098475 Ga0068856_1000984753 203
54 3300005614 Ga0068856_100719711 Ga0068856_1007197112 203
55 3300009093 Ga0105240_10000003 Ga0105240_100000031142 203
56 3300009098 Ga0105245_10000155 Ga0105245_1000015552 203
57 3300009098 Ga0105245_10001407 Ga0105245_1000140711 203
58 3300009148 Ga0105243_10000001 Ga0105243_10000001151 203
59 3300009176 Ga0105242_10000002 Ga0105242_10000002145 203
60 3300010375 Ga0105239_10034476 Ga0105239_100344762 203
61 3300010375 Ga0105239_10163476 Ga0105239_101634763 203
62 3300013297 Ga0157378_10023146 Ga0157378_100231462 203
63 3300013297 Ga0157378_10259830 Ga0157378_102598303 203
64 3300014969 Ga0157376_10000007 Ga0157376_10000007182 203
65 3300025907 Ga0207645_10100776 Ga0207645_101007761 203
66 3300025909 Ga0207705_10000065 Ga0207705_1000006543 203
67 3300025912 Ga0207707_10006236 Ga0207707_1000623610 203
68 3300025913 Ga0207695_10000005 Ga0207695_100000051153 203
69 3300025914 Ga0207671_10287928 Ga0207671_102879282 203
70 3300025919 Ga0207657_10086711 Ga0207657_100867112 203
71 3300025927 Ga0207687_10000791 Ga0207687_1000079123 203
72 3300025927 Ga0207687_10034783 Ga0207687_100347834 203
73 3300025934 Ga0207686_10000001 Ga0207686_100000011007 203
74 3300025935 Ga0207709_10000002 Ga0207709_100000021111 203
75 3300025960 Ga0207651_10000247 Ga0207651_100002471 203
76 3300026078 Ga0207702_10046089 Ga0207702_100460893 203
77 3300026078 Ga0207702_11264909 Ga0207702_112649091 203
78 3300026121 Ga0207683_10006347 Ga0207683_100063476 203
79 3300028379 Ga0268266_10244817 Ga0268266_102448171 203
80 3300038443 Ga0395901_0023279 Ga0395901_0023279_5408_6019 203
81 3300038443 Ga0395901_0029741 Ga0395901_0029741_2267_2878 203
82 3300045976 Ga0466967_0574420 Ga0466967_0574420_201_815 203
83 3300050492 nmdc:mga0yw44_765430_c1 nmdc:mga0yw44_765430_c1_10_621 203
84 3300003320 rootH2_10284495 rootH2_102844952 204
85 3300003322 rootL2_10311190 rootL2_103111903 204
86 3300005563 Ga0068855_100060720 Ga0068855_1000607202 204
87 3300005577 Ga0068857_100447507 Ga0068857_1004475072 204
88 3300005616 Ga0068852_100874001 Ga0068852_1008740012 204
89 3300005841 Ga0068863_100158641 Ga0068863_1001586412 204
90 3300025927 Ga0207687_10149011 Ga0207687_101490111 204
91 3300025949 Ga0207667_10047631 Ga0207667_100476312 204
92 3300026116 Ga0207674_10053684 Ga0207674_100536846 204
93 3300027665 Ga0209983_1011185 Ga0209983_10111853 204
94 3300027876 Ga0209974_10004256 Ga0209974_100042564 204
95 3300048915 Ga0496112_0096948 Ga0496112_0096948_64_681 204
96 3300053093 Ga0500651_0000193 Ga0500651_0000193_18034_18648 204
97 3300005345 Ga0070692_10148731 Ga0070692_101487312 205
98 3300005530 Ga0070679_100023334 Ga0070679_1000233342 205
99 3300005577 Ga0068857_100000011 Ga0068857_10000001147 205
100 3300009551 Ga0105238_10286215 Ga0105238_102862152 205
101 3300025909 Ga0207705_10025831 Ga0207705_100258312 205
102 3300025921 Ga0207652_10011820 Ga0207652_100118208 205
103 3300025924 Ga0207694_10274285 Ga0207694_102742852 205
104 3300026116 Ga0207674_10000001 Ga0207674_10000001115 205
105 3300037418 Ga0395900_0065359 Ga0395900_0065359_2419_3060 205
106 3300009098 Ga0105245_10051996 Ga0105245_100519964 206
107 3300013296 Ga0157374_10000926 Ga0157374_1000092623 206
108 3300003911 JGI25405J52794_10070671 JGI25405J52794_100706711 207
109 3300005937 Ga0081455_10000003 Ga0081455_1000000396 207
110 3300013296 Ga0157374_10000317 Ga0157374_1000031726 207
111 3300014745 Ga0157377_10160882 Ga0157377_101608822 207
112 3300025942 Ga0207689_10195323 Ga0207689_101953232 209
113 3300050494 nmdc:mga06z11_131600_c1 nmdc:mga06z11_131600_c1_135_767 209
114 3300005577 Ga0068857_100752704 Ga0068857_1007527041 211
115 3300026116 Ga0207674_10663655 Ga0207674_106636552 211
116 3300005614 Ga0068856_100032993 Ga0068856_1000329933 212
117 3300006881 Ga0068865_100087803 Ga0068865_1000878033 212
118 3300026078 Ga0207702_10024275 Ga0207702_100242753 212
119 3300026089 Ga0207648_10048600 Ga0207648_100486005 212
120 3300006237 Ga0097621_100000001 Ga0097621_100000001375 214
121 3300006358 Ga0068871_100000001 Ga0068871_100000001230 214
122 3300006051 Ga0075364_10024968 Ga0075364_100249682 216
123 3300006195 Ga0075366_10000890 Ga0075366_1000089012 216
124 3300050491 nmdc:mga00v17_120508_c1 nmdc:mga00v17_120508_c1_302_958 216
125 3300050493 nmdc:mga0k408_86_c3 nmdc:mga0k408_86_c3_23745_24401 216
126 3300006195 Ga0075366_10002601 Ga0075366_100026018 217
127 3300050489 nmdc:mga03683_180777_c1 nmdc:mga03683_180777_c1_41_700 217
128 3300050491 nmdc:mga00v17_175292_c1 nmdc:mga00v17_175292_c1_427_1086 217
129 3300050492 nmdc:mga0yw44_163710_c1 nmdc:mga0yw44_163710_c1_314_973 217
130 3300053088 Ga0500644_0000842 Ga0500644_0000842_8734_9393 218
131 3300053142 Ga0500577_0000577 Ga0500577_0000577_4270_4929 218
132 3300006038 Ga0075365_10000040 Ga0075365_100000407 219
133 3300006051 Ga0075364_10016719 Ga0075364_100167194 219
134 3300006177 Ga0075362_10171573 Ga0075362_101715731 219
135 3300009987 Ga0105030_100324 Ga0105030_1003245 219
136 3300050489 nmdc:mga03683_33154_c1 nmdc:mga03683_33154_c1_53_715 219
137 3300050491 nmdc:mga00v17_13075_c1 nmdc:mga00v17_13075_c1_1583_2245 219
138 3300050492 nmdc:mga0yw44_2_c1 nmdc:mga0yw44_2_c1_538422_539087 219
139 3300006042 Ga0075368_10024319 Ga0075368_100243195 220
140 3300006195 Ga0075366_10000113 Ga0075366_1000011319 220
141 3300027866 Ga0209813_10005001 Ga0209813_100050012 220
142 3300050493 nmdc:mga0k408_849_c1 nmdc:mga0k408_849_c1_15004_15723 220
143 3300050495 nmdc:mga04h51_5434_c1 nmdc:mga04h51_5434_c1_1295_2014 220
144 3300003320 rootH2_10164640 rootH2_101646402 221

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13578

Methyltransf_24

Methyltransferase domain

53

190

0.86

PF05711

TylF

Macrocin-O-methyltransferase (TylF)

2

217

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
4cdz-assembly1.cif.gz_A-2 crystal structure of spinosyn rhamnosyl 4'-o-methyltransferase spnh from saccharopolyspora spinosa 0.9106 30 219
5i10-assembly1.cif.gz_A crystal structure of spinosyn rhamnosyl 4'-o-methyltransferase spnh mutant t242q from saccharopolyspora spinosa 0.9008 30 219
4ce0-assembly1.cif.gz_A-2 crystal structure of sah-bound spinosyn rhamnosyl 4'-o- methyltransferase spnh from saccharopolyspora spinosa 0.8806 30 219
4xvz-assembly2.cif.gz_D mycf mycinamicin iii 3'-o-methyltransferase in complex with mg 0.8584 26 219
4xvz-assembly2.cif.gz_C mycf mycinamicin iii 3'-o-methyltransferase in complex with mg 0.8375 3 219
ID Description Score Start End Superfamily
af_Q4CNK2_1_171_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8519 70 218 3.40.50.150
af_Q4D9H6_110_325_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8487 29 218 3.40.50.150
4gf5C00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8369 33 219 3.40.50.150
af_A0A1D6N1S4_236_397_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.8099 34 155 3.40.50.150
2wk1A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.7755 2 220 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A7T9EY92-F1-model_v4 deleted 0.9811 24 218
AF-A0A2G6HKU3-F1-model_v4 Methyltransferase 0.9764 24 218
AF-R4PV83-F1-model_v4 Methyltransferase 0.9667 24 221
AF-A0A3B8XF08-F1-model_v4 deleted 0.9628 24 221
AF-A0A563CUG1-F1-model_v4 Class I SAM-dependent methyltransferase 0.9628 81 218

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Predicted Structure (AlphaFold2)

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