F189802

General Info

Members Datasets Scaffolds Average Seq Length
143 105 286 354

Family's Representative Sequence

Representative Sequence 3300047322|Ga0495680_0053011|Ga0495680_0053011_340_1503
Length 387
Sequence MSERKRARADRATAREPGGDGARAVXXXXQPPGIMSRIRPRDDVALMEGYHSPQVDVKVRLNTNEAPEPPPIAFTERLADELRRIDWHRYPDRAATELRAAIADLHGVRPDQVFAANGSNEVLQTLCLTYGGHGRCAAVFEPTYALHSHIAALTGTSVATGERREDFTLDIDEVDRVISRAHPDITFLSSPNNPTGLVETEDTVRRTLEVVPGLLVVDEAYGQFAPWSALELVDEGRPLVVTRTYSKTWSMAAARLGYLIGPSWLVRELEKVVLPYHLDSFKQIAGRLALDYRHEMDARVAALVEERGRLSAALRDLPLEVWPSGANFVLVRPHTVDGDEVWQALLERSILVRNCASWPRLDGCLRITVGTAEEDDALLSALQEVLT

Samples

Sample ID Description Type Environment
1 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
2 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
3 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
4 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
5 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
6 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
7 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
8 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
9 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
10 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
11 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
12 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
13 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
14 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
15 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
16 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
17 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
18 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
19 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
20 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
25 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
26 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
27 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
28 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
29 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
30 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
31 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
32 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
33 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
34 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
35 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
36 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
37 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
38 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
39 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
40 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
41 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
42 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
43 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
44 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
45 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
46 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
47 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
48 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
49 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
50 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
51 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
52 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
53 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
54 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
55 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
56 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
57 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
58 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
59 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
60 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
61 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
62 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
63 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
64 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
65 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
66 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
67 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
68 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
70 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
71 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
79 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
80 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
81 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
82 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
83 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
84 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
85 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
86 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
87 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
88 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
89 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
90 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
91 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
92 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
93 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
94 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
95 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
96 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
97 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
98 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
99 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
100 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
101 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
102 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
103 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
104 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
105 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.09
Nodule 0
Rhizoplane 1.4
Rhizosphere 86.01
Stem 0
Stem Tuber 0
Unclassified 4.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495680_0053011 3300047322 Bacteria 3159
2 Ga0070708_100000799 3300005445 Bacteria 23764
3 Ga0070706_100034310 3300005467 Bacteria 4686
4 Ga0070706_100085748 3300005467 Bacteria 2918
5 Ga0070698_100006926 3300005471 Bacteria 12281
6 Ga0070699_100101472 3300005518 Bacteria 2522
7 Ga0070699_100138230 3300005518 Bacteria 2150
8 Ga0075365_10015342 3300006038 Bacteria 4633
9 Ga0075365_10024744 3300006038 Bacteria 3793
10 Ga0075365_10092850 3300006038 Bacteria 2058
11 Ga0075363_100089901 3300006048 Bacteria 1689
12 Ga0075364_10005280 3300006051 Bacteria 7500
13 Ga0075364_10040736 3300006051 Bacteria 3013
14 Ga0075362_10107010 3300006177 Bacteria 1313
15 Ga0075428_100135616 3300006844 Bacteria 2676
16 Ga0075428_100499441 3300006844 Bacteria 1302
17 Ga0075428_100585531 3300006844 Bacteria 1192
18 Ga0075430_100135761 3300006846 Bacteria 2050
19 Ga0075433_10032066 3300006852 Bacteria 4497
20 Ga0111539_10011448 3300009094 Bacteria 11137
21 Ga0105245_10008048 3300009098 Bacteria 9218
22 Ga0105242_10280301 3300009176 Bacteria 1514
23 Ga0105239_10173664 3300010375 Bacteria 2410
24 Ga0157375_10337130 3300013308 Unclassified 1673
25 Ga0157377_10183804 3300014745 Bacteria 1317
26 Ga0163161_10341867 3300017792 Bacteria 1187
27 Ga0207684_10054948 3300025910 Bacteria 3378
28 Ga0207684_10344962 3300025910 Unclassified 1282
29 Ga0207646_10076577 3300025922 Bacteria 2989
30 Ga0207687_10129752 3300025927 Bacteria 1898
31 Ga0207675_100137820 3300026118 Bacteria 2316
32 Ga0265330_10030556 3300031235 Bacteria 2417
33 Ga0265327_10010431 3300031251 Bacteria 6538
34 Ga0316576_10005813 3300031727 Bacteria 7605
35 Ga0316576_10099450 3300031727 Bacteria 2173
36 Ga0316578_10038664 3300031728 Bacteria 2753
37 Ga0307413_10214855 3300031824 Bacteria 1400
38 Ga0307410_10015005 3300031852 Bacteria 4582
39 Ga0307406_10091850 3300031901 Bacteria 2046
40 Ga0307409_100030565 3300031995 Bacteria 3872
41 Ga0307416_100006336 3300032002 Bacteria 7396
42 Ga0307411_10010502 3300032005 Bacteria 4940
43 Ga0307415_100018650 3300032126 Bacteria 4196
44 Ga0316585_10034739 3300032137 Bacteria 1595
45 Ga0373932_0001031 3300035112 Bacteria 8048
46 Ga0316574_0010960 3300035398 Bacteria 5139
47 Ga0373931_0000001 3300035691 Bacteria 634029
48 Ga0373937_0003642 3300036401 Bacteria 12998
49 Ga0373937_0364438 3300036401 Unclassified 1370
50 Ga0316584_0008081 3300036712 Bacteria 7227
51 Ga0436364_0875763 3300037853 Bacteria 1423
52 Ga0400485_06905 3300038735 Bacteria 10507
53 Ga0400483_031727 3300039062 Bacteria 4177
54 Ga0451843_1713478 3300041509 Bacteria 2091
55 Ga0451853_0915893 3300041512 Bacteria 1439
56 Ga0439434_0001101 3300042435 Bacteria 7826
57 Ga0451577_0225039 3300042876 Unclassified 1696
58 Ga0453684_0049941 3300044712 Bacteria 5508
59 Ga0495629_0275810 3300046459 Unclassified 1154
60 Ga0495653_0130929 3300046463 Bacteria 1776
61 Ga0495582_0019308 3300046473 Bacteria 3728
62 Ga0495608_0050999 3300046511 Bacteria 2744
63 Ga0495608_0178484 3300046511 Bacteria 1344
64 Ga0495630_0033141 3300046517 Bacteria 3852
65 Ga0495630_0086403 3300046517 Bacteria 2369
66 Ga0495652_0167853 3300046529 Bacteria 1697
67 Ga0495586_0055964 3300046535 Bacteria 2138
68 Ga0495587_0013674 3300046536 Bacteria 5098
69 Ga0495621_0045030 3300046539 Bacteria 1562
70 Ga0495667_0004320 3300046559 Bacteria 9588
71 Ga0495657_0006564 3300046675 Bacteria 9089
72 Ga0495657_0184878 3300046675 Bacteria 1277
73 Ga0495623_0169713 3300046679 Bacteria 1275
74 Ga0495658_0092782 3300046683 Bacteria 1791
75 Ga0495658_0128033 3300046683 Bacteria 1543
76 Ga0495613_0000201 3300046689 Bacteria 58736
77 Ga0495674_0084525 3300047319 Bacteria 2720
78 Ga0495672_0004368 3300047320 Bacteria 11613
79 Ga0495680_0008662 3300047322 Bacteria 9232
80 Ga0495602_0113767 3300048088 Bacteria 2193
81 Ga0496102_0361276 3300048905 Bacteria 1367
82 Ga0496109_0373482 3300048912 Bacteria 1347
83 Ga0501031_0166417 3300049568 Bacteria 1441
84 Ga0501032_0008938 3300049569 Bacteria 7286
85 Ga0501034_0000566 3300049571 Bacteria 58602
86 Ga0501034_0027863 3300049571 Bacteria 5745
87 Ga0501034_0029200 3300049571 Bacteria 5606
88 Ga0501034_0168091 3300049571 Bacteria 2161
89 Ga0501034_0351486 3300049571 Bacteria 1402
90 Ga0501037_0004464 3300049573 Bacteria 10164
91 Ga0501038_0055574 3300049574 Bacteria 3400
92 Ga0501038_0132233 3300049574 Bacteria 2047
93 Ga0501040_0163253 3300049576 Bacteria 1575
94 Ga0501041_0064283 3300049577 Bacteria 2247
95 Ga0501041_0179287 3300049577 Bacteria 1326
96 Ga0501042_0033463 3300049578 Bacteria 3644
97 Ga0501042_0045338 3300049578 Bacteria 3134
98 Ga0501047_0136924 3300049581 Bacteria 2329
99 Ga0501047_0224730 3300049581 Bacteria 1733
100 Ga0501048_0063568 3300049582 Bacteria 2610
101 Ga0501068_0005636 3300049584 Bacteria 6858
102 Ga0501068_0012932 3300049584 Bacteria 4743
103 Ga0501069_0000047 3300049585 Bacteria 73029
104 Ga0501069_0028176 3300049585 Bacteria 3079
105 Ga0501070_0000008 3300049586 Bacteria 199963
106 Ga0501070_0001488 3300049586 Bacteria 20962
107 Ga0501070_0029422 3300049586 Bacteria 4605
108 Ga0501070_0317412 3300049586 Bacteria 1268
109 Ga0501072_0055777 3300049588 Bacteria 3114
110 Ga0501073_0132052 3300049589 Bacteria 1731
111 Ga0501074_0038334 3300049590 Bacteria 3474
112 Ga0501075_0362962 3300049591 Bacteria 1104
113 Ga0501077_0071280 3300049593 Bacteria 2203
114 Ga0501079_0035533 3300049741 Bacteria 3836
115 Ga0501080_0000737 3300049742 Bacteria 26441
116 Ga0501080_0004296 3300049742 Bacteria 12649
117 Ga0501080_0431257 3300049742 Bacteria 1183
118 Ga0501081_0035539 3300049743 Bacteria 3392
119 Ga0501083_0002079 3300049744 Bacteria 13778
120 Ga0501083_0019602 3300049744 Bacteria 4711
121 Ga0501035_0022255 3300049822 Bacteria 5821
122 Ga0501044_0011816 3300049823 Bacteria 9460
123 Ga0501044_0047104 3300049823 Bacteria 4460
124 nmdc:mga03683_76171_c1 3300050489 Bacteria 1441
125 nmdc:mga00v17_98178_c1 3300050491 Bacteria 1846
126 nmdc:mga0yw44_12181_c1 3300050492 Bacteria 4472
127 nmdc:mga0yw44_4557_c1 3300050492 Bacteria 6382
128 nmdc:mga05p37_425322_c1 3300050507 Bacteria 1544
129 nmdc:mga0qj67_127491_c1 3300050509 Bacteria 2059
130 nmdc:mga0n895_47347_c1 3300050512 Bacteria 4204
131 nmdc:mga0rr50_46956_c1 3300050513 Bacteria 3182
132 Ga0495601_0217398 3300053077 Bacteria 1248
133 Ga0495601_0266323 3300053077 Bacteria 1118
134 Ga0495595_0048101 3300053084 Bacteria 1969
135 Ga0495619_0224583 3300053085 Unclassified 1301
136 Ga0495619_0282411 3300053085 Bacteria 1150
137 Ga0500566_0000200 3300053094 Bacteria 31433
138 Ga0500568_0000081 3300053139 Bacteria 92418
139 Ga0501084_0000026 3300054114 Bacteria 132271
140 Ga0501084_0064602 3300054114 Bacteria 3062
141 Ga0501084_0149668 3300054114 Bacteria 1967
142 Ga0501082_0051085 3300060353 Bacteria 3564
143 Ga0501082_0093859 3300060353 Bacteria 2593
144 Ga0495680_0053011
145 Ga0070708_100000799
146 Ga0070706_100034310
147 Ga0070706_100085748
148 Ga0070698_100006926
149 Ga0070699_100101472
150 Ga0070699_100138230
151 Ga0075365_10015342
152 Ga0075365_10024744
153 Ga0075365_10092850
154 Ga0075363_100089901
155 Ga0075364_10005280
156 Ga0075364_10040736
157 Ga0075362_10107010
158 Ga0075428_100135616
159 Ga0075428_100499441
160 Ga0075428_100585531
161 Ga0075430_100135761
162 Ga0075433_10032066
163 Ga0111539_10011448
164 Ga0105245_10008048
165 Ga0105242_10280301
166 Ga0105239_10173664
167 Ga0157375_10337130
168 Ga0157377_10183804
169 Ga0163161_10341867
170 Ga0207684_10054948
171 Ga0207684_10344962
172 Ga0207646_10076577
173 Ga0207687_10129752
174 Ga0207675_100137820
175 Ga0265330_10030556
176 Ga0265327_10010431
177 Ga0316576_10005813
178 Ga0316576_10099450
179 Ga0316578_10038664
180 Ga0307413_10214855
181 Ga0307410_10015005
182 Ga0307406_10091850
183 Ga0307409_100030565
184 Ga0307416_100006336
185 Ga0307411_10010502
186 Ga0307415_100018650
187 Ga0316585_10034739
188 Ga0373932_0001031
189 Ga0316574_0010960
190 Ga0373931_0000001
191 Ga0373937_0003642
192 Ga0373937_0364438
193 Ga0316584_0008081
194 Ga0436364_0875763
195 Ga0400485_06905
196 Ga0400483_031727
197 Ga0451843_1713478
198 Ga0451853_0915893
199 Ga0439434_0001101
200 Ga0451577_0225039
201 Ga0453684_0049941
202 Ga0495629_0275810
203 Ga0495653_0130929
204 Ga0495582_0019308
205 Ga0495608_0050999
206 Ga0495608_0178484
207 Ga0495630_0033141
208 Ga0495630_0086403
209 Ga0495652_0167853
210 Ga0495586_0055964
211 Ga0495587_0013674
212 Ga0495621_0045030
213 Ga0495667_0004320
214 Ga0495657_0006564
215 Ga0495657_0184878
216 Ga0495623_0169713
217 Ga0495658_0092782
218 Ga0495658_0128033
219 Ga0495613_0000201
220 Ga0495674_0084525
221 Ga0495672_0004368
222 Ga0495680_0008662
223 Ga0495602_0113767
224 Ga0496102_0361276
225 Ga0496109_0373482
226 Ga0501031_0166417
227 Ga0501032_0008938
228 Ga0501034_0000566
229 Ga0501034_0027863
230 Ga0501034_0029200
231 Ga0501034_0168091
232 Ga0501034_0351486
233 Ga0501037_0004464
234 Ga0501038_0055574
235 Ga0501038_0132233
236 Ga0501040_0163253
237 Ga0501041_0064283
238 Ga0501041_0179287
239 Ga0501042_0033463
240 Ga0501042_0045338
241 Ga0501047_0136924
242 Ga0501047_0224730
243 Ga0501048_0063568
244 Ga0501068_0005636
245 Ga0501068_0012932
246 Ga0501069_0000047
247 Ga0501069_0028176
248 Ga0501070_0000008
249 Ga0501070_0001488
250 Ga0501070_0029422
251 Ga0501070_0317412
252 Ga0501072_0055777
253 Ga0501073_0132052
254 Ga0501074_0038334
255 Ga0501075_0362962
256 Ga0501077_0071280
257 Ga0501079_0035533
258 Ga0501080_0000737
259 Ga0501080_0004296
260 Ga0501080_0431257
261 Ga0501081_0035539
262 Ga0501083_0002079
263 Ga0501083_0019602
264 Ga0501035_0022255
265 Ga0501044_0011816
266 Ga0501044_0047104
267 nmdc:mga03683_76171_c1
268 nmdc:mga00v17_98178_c1
269 nmdc:mga0yw44_12181_c1
270 nmdc:mga0yw44_4557_c1
271 nmdc:mga05p37_425322_c1
272 nmdc:mga0qj67_127491_c1
273 nmdc:mga0n895_47347_c1
274 nmdc:mga0rr50_46956_c1
275 Ga0495601_0217398
276 Ga0495601_0266323
277 Ga0495595_0048101
278 Ga0495619_0224583
279 Ga0495619_0282411
280 Ga0500566_0000200
281 Ga0500568_0000081
282 Ga0501084_0000026
283 Ga0501084_0064602
284 Ga0501084_0149668
285 Ga0501082_0051085
286 Ga0501082_0093859

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00155

Aminotran_1_2

Aminotransferase class I and II

56

382

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
4r8d-assembly1.cif.gz_A crystal structure of rv1600 encoded aminotransferase in complex with plp-mes from mycobacterium tuberculosis 0.9469 4 350
3cq5-assembly1.cif.gz_B histidinol-phosphate aminotransferase from corynebacterium glutamicum in complex with pmp 0.9422 4 350
4r8d-assembly1.cif.gz_A crystal structure of rv1600 encoded aminotransferase in complex with plp-mes from mycobacterium tuberculosis 0.9338 4 350
3cq5-assembly1.cif.gz_B histidinol-phosphate aminotransferase from corynebacterium glutamicum in complex with pmp 0.9292 4 350
3ftb-assembly2.cif.gz_E the crystal structure of the histidinol-phosphate aminotransferase from clostridium acetobutylicum 0.9142 23 350
ID Description Score Start End Superfamily
3cq4B01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9552 254 348 3.90.1150.10
af_Q58365_285_372_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9523 266 347 3.90.1150.10
af_P36605_51_267_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9478 51 253 3.40.640.10
af_P9WML7_277_364_3.90.1150.10 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.946 257 346 3.90.1150.10
1geyA02 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9427 255 342 3.90.1150.10
ID Description Score Start End GO Terms
AF-A0A6J7KTE3-F1-model_v4 Unannotated protein 0.9827 229 349 GO:0008483
GO:0008652
GO:0030170
AF-A0A6I3EU76-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9766 1 264 GO:0000105
GO:0008483
GO:0030170
AF-A0A6I3CA09-F1-model_v4 Aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.9758 1 261 GO:0000105
GO:0008483
GO:0030170
AF-A0A7W2H3I1-F1-model_v4 Histidinol-phosphate aminotransferase (EC 2.6.1.9) (Imidazole acetol-phosphate transaminase) 0.9749 1 349 GO:0000105
GO:0004400
GO:0030170
AF-A0A382E517-F1-model_v4 Aminotransferase class I/classII large domain-containing protein 0.9674 38 226 GO:0000105
GO:0008483
GO:0030170

Map