F189647

General Info

Members Datasets Scaffolds Average Seq Length
143 94 286 318

Family's Representative Sequence

Representative Sequence 3300046460|Ga0495638_0008718|Ga0495638_0008718_6026_7087
Length 353
Sequence LALNARLTRSLKPEAGSLMKTVQTIAILGAGSWGTALAVHLARTGHDVRLWARDGALVTSMMTRRENPTYLSGVPLEARITPTASMAEALPGASVVVVAVPSHGLRTTLRPAVALLDRGVPIVSTVKGLEQGSLLRMSEVIGDEAGGAWPIVALSGPTFAREFAAALPAAVSVASADRAAAELVQAEFRSPAVRLYITDDVVGVEMGGALKNVIAIAAGLVDSLGLGHNAMAALVTRGLAEMSRLATALGGRRETLAGLSGLGDLVLTCTGDLSRNRQVGVELGRGQSLDSILGGMKMVAEGVRTAQAALALGARHGVELPIIAQMHEVLDTGKNPRTALGDLMLRPQRAEHE

Samples

Sample ID Description Type Environment
1 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
5 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
6 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
7 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
11 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
15 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
16 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
17 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
18 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
19 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
34 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
35 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
36 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
47 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
49 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
50 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
51 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
52 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
53 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
54 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
55 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
56 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
57 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
58 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
59 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
60 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
61 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
62 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
63 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
64 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
65 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
66 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
67 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
68 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
69 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
70 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
71 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
72 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
73 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
74 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
75 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
77 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
79 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
80 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
81 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
82 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
83 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
84 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
85 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
86 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
87 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
88 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
89 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
90 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
91 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
92 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
93 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
94 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 4.2
Rhizosphere 95.8
Stem 0
Stem Tuber 0
Unclassified 6.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495638_0008718 3300046460 Bacteria 7169
2 Ga0070658_10007853 3300005327 Bacteria 8594
3 Ga0070666_10199048 3300005335 Bacteria 1409
4 Ga0070669_100002325 3300005353 Bacteria 13747
5 Ga0070701_10019577 3300005438 Bacteria 3199
6 Ga0070705_100022202 3300005440 Bacteria 3388
7 Ga0070700_100055766 3300005441 Bacteria 2474
8 Ga0070694_100004661 3300005444 Bacteria 8246
9 Ga0070708_100111252 3300005445 Bacteria 2518
10 Ga0070663_100003197 3300005455 Bacteria 9406
11 Ga0068867_100026506 3300005459 Bacteria 4163
12 Ga0070707_100223381 3300005468 Bacteria 1834
13 Ga0070679_100182165 3300005530 Unclassified 2073
14 Ga0070695_100004064 3300005545 Bacteria 8563
15 Ga0070696_100069988 3300005546 Bacteria 2467
16 Ga0070696_100100503 3300005546 Bacteria 2072
17 Ga0070704_100007489 3300005549 Bacteria 6497
18 Ga0070702_100001630 3300005615 Bacteria 9293
19 Ga0068861_100021221 3300005719 Bacteria 4667
20 Ga0068858_100081530 3300005842 Bacteria 3007
21 Ga0068860_100139656 3300005843 Bacteria 2328
22 Ga0070717_10001087 3300006028 Bacteria 18276
23 Ga0075428_100008965 3300006844 Bacteria 11099
24 Ga0075431_100002553 3300006847 Bacteria 17577
25 Ga0075431_100237127 3300006847 Unclassified 1857
26 Ga0075433_10035320 3300006852 Bacteria 4297
27 Ga0075433_10069846 3300006852 Bacteria 3086
28 Ga0075433_10090297 3300006852 Bacteria 2708
29 Ga0075434_100032438 3300006871 Bacteria 5150
30 Ga0075434_100085295 3300006871 Bacteria 3157
31 Ga0075434_100176363 3300006871 Bacteria 2157
32 Ga0075429_100110561 3300006880 Bacteria 2402
33 Ga0075429_100274868 3300006880 Bacteria 1475
34 Ga0075436_100031044 3300006914 Bacteria 3677
35 Ga0075436_100085998 3300006914 Bacteria 2184
36 Ga0097620_100244509 3300006931 Bacteria 1884
37 Ga0075435_100129666 3300007076 Bacteria 2110
38 Ga0111539_10001538 3300009094 Bacteria 30724
39 Ga0111539_10057668 3300009094 Unclassified 4610
40 Ga0111539_10073504 3300009094 Bacteria 4031
41 Ga0111539_10264760 3300009094 Bacteria 2001
42 Ga0111539_10412626 3300009094 Bacteria 1573
43 Ga0111539_10416892 3300009094 Bacteria 1564
44 Ga0114129_10000257 3300009147 Bacteria 60056
45 Ga0114129_10000306 3300009147 Bacteria 57109
46 Ga0114129_10002632 3300009147 Bacteria 24977
47 Ga0114129_10011766 3300009147 Bacteria 12451
48 Ga0114129_10027021 3300009147 Bacteria 8125
49 Ga0114129_10174906 3300009147 Unclassified 2924
50 Ga0114129_10192710 3300009147 Bacteria 2766
51 Ga0114129_10213376 3300009147 Bacteria 2608
52 Ga0114129_10258884 3300009147 Bacteria 2333
53 Ga0114129_10268471 3300009147 Unclassified 2283
54 Ga0105248_10100824 3300009177 Bacteria 3254
55 Ga0105248_10115528 3300009177 Bacteria 3027
56 Ga0105248_10152408 3300009177 Bacteria 2608
57 Ga0157373_10146905 3300013100 Bacteria 1658
58 Ga0157371_10128252 3300013102 Bacteria 1804
59 Ga0157380_10014083 3300014326 Bacteria 5844
60 Ga0157380_10235764 3300014326 Bacteria 1646
61 Ga0207660_10077562 3300025917 Bacteria 2433
62 Ga0207709_10020282 3300025935 Bacteria 3748
63 Ga0207704_10050449 3300025938 Bacteria 2510
64 Ga0207711_10385386 3300025941 Bacteria 1301
65 Ga0207679_10135950 3300025945 Bacteria 1979
66 Ga0207668_10146439 3300025972 Bacteria 1823
67 Ga0207703_10116392 3300026035 Bacteria 2288
68 Ga0207708_10007428 3300026075 Bacteria 8100
69 Ga0207648_10018303 3300026089 Bacteria 6346
70 Ga0207648_10137251 3300026089 Bacteria 2155
71 Ga0207675_100003256 3300026118 Bacteria 15906
72 Ga0207675_100069641 3300026118 Bacteria 3288
73 Ga0207428_10005045 3300027907 Bacteria 12402
74 Ga0207428_10169285 3300027907 Bacteria 1655
75 Ga0268264_10099856 3300028381 Bacteria 2520
76 Ga0265338_10002893 3300028800 Bacteria 25011
77 Ga0265316_10032987 3300031344 Bacteria 4221
78 Ga0307408_100069185 3300031548 Bacteria 2602
79 Ga0265314_10015966 3300031711 Bacteria 5946
80 Ga0307405_10231260 3300031731 Bacteria 1363
81 Ga0307413_10020070 3300031824 Bacteria 3546
82 Ga0307410_10022459 3300031852 Bacteria 3901
83 Ga0307410_10072477 3300031852 Bacteria 2392
84 Ga0307407_10022724 3300031903 Bacteria 3260
85 Ga0307407_10026014 3300031903 Bacteria 3094
86 Ga0307412_10030500 3300031911 Unclassified 3396
87 Ga0307409_100121976 3300031995 Bacteria 2209
88 Ga0307409_100173303 3300031995 Bacteria 1901
89 Ga0307415_100113497 3300032126 Bacteria 2015
90 Ga0373954_0031636 3300035118 Bacteria 2444
91 Ga0373955_0012693 3300035172 Bacteria 4056
92 Ga0373937_0004389 3300036401 Bacteria 11985
93 Ga0373937_0073841 3300036401 Bacteria 3147
94 Ga0373937_0212645 3300036401 Bacteria 1820
95 Ga0451577_0024536 3300042876 Bacteria 5484
96 Ga0453683_0176596 3300044673 Unclassified 1354
97 Ga0453684_0549411 3300044712 Bacteria 1272
98 Ga0466967_0194176 3300045976 Bacteria 1920
99 Ga0495580_0071315 3300046472 Bacteria 2427
100 Ga0495640_0088410 3300046533 Bacteria 2048
101 Ga0495613_0007712 3300046689 Bacteria 8006
102 Ga0495684_0023389 3300047471 Bacteria 4751
103 Ga0496102_0015215 3300048905 Bacteria 6698
104 Ga0496103_0060823 3300048906 Bacteria 2348
105 Ga0496104_0406544 3300048907 Bacteria 1274
106 Ga0496105_0221575 3300048908 Bacteria 1540
107 Ga0496114_0053328 3300048917 Bacteria 3371
108 Ga0496114_0365961 3300048917 Bacteria 1276
109 Ga0501033_0075897 3300049570 Bacteria 2467
110 Ga0501036_0263351 3300049572 Bacteria 1444
111 Ga0501039_0335941 3300049575 Bacteria 1187
112 Ga0501042_0058003 3300049578 Bacteria 2763
113 Ga0501042_0089415 3300049578 Bacteria 2210
114 Ga0501071_0085236 3300049587 Bacteria 2316
115 Ga0501071_0089193 3300049587 Bacteria 2263
116 Ga0501072_0008843 3300049588 Bacteria 7653
117 Ga0501075_0094576 3300049591 Bacteria 2268
118 Ga0501076_0055284 3300049592 Bacteria 3148
119 Ga0501076_0143698 3300049592 Bacteria 1939
120 Ga0501079_0212532 3300049741 Bacteria 1511
121 Ga0501081_0024393 3300049743 Bacteria 4061
122 nmdc:mga05p37_2193_c1 3300050507 Bacteria 22758
123 nmdc:mga05p37_225526_c1 3300050507 Unclassified 2260
124 nmdc:mga05p37_245653_c1 3300050507 Bacteria 2149
125 nmdc:mga05p37_4611_c1 3300050507 Bacteria 16111
126 nmdc:mga05p37_71590_c1 3300050507 Bacteria 4265
127 nmdc:mga05p37_9_c1 3300050507 Bacteria 151480
128 nmdc:mga09592_277610_c1 3300050508 Bacteria 1453
129 nmdc:mga09592_33052_c1 3300050508 Bacteria 4315
130 nmdc:mga0qj67_359086_c1 3300050509 Bacteria 1177
131 nmdc:mga06r32_120145_c1 3300050510 Bacteria 2591
132 nmdc:mga08y16_193066_c1 3300050511 Bacteria 2112
133 nmdc:mga08y16_22716_c1 3300050511 Bacteria 6623
134 nmdc:mga08y16_254765_c1 3300050511 Bacteria 1813
135 nmdc:mga0n895_12564_c1 3300050512 Bacteria 7599
136 nmdc:mga0n895_8874_c1 3300050512 Bacteria 8753
137 nmdc:mga0n895_97833_c1 3300050512 Unclassified 2940
138 nmdc:mga0rr50_113618_c1 3300050513 Bacteria 2146
139 nmdc:mga0rr50_114821_c1 3300050513 Bacteria 2136
140 nmdc:mga0a205_69207_c1 3300050515 Bacteria 3409
141 Ga0501084_0154804 3300054114 Bacteria 1933
142 Ga0501082_0058100 3300060353 Bacteria 3333
143 Ga0501082_0134406 3300060353 Bacteria 2146
144 Ga0495638_0008718
145 Ga0070658_10007853
146 Ga0070666_10199048
147 Ga0070669_100002325
148 Ga0070701_10019577
149 Ga0070705_100022202
150 Ga0070700_100055766
151 Ga0070694_100004661
152 Ga0070708_100111252
153 Ga0070663_100003197
154 Ga0068867_100026506
155 Ga0070707_100223381
156 Ga0070679_100182165
157 Ga0070695_100004064
158 Ga0070696_100069988
159 Ga0070696_100100503
160 Ga0070704_100007489
161 Ga0070702_100001630
162 Ga0068861_100021221
163 Ga0068858_100081530
164 Ga0068860_100139656
165 Ga0070717_10001087
166 Ga0075428_100008965
167 Ga0075431_100002553
168 Ga0075431_100237127
169 Ga0075433_10035320
170 Ga0075433_10069846
171 Ga0075433_10090297
172 Ga0075434_100032438
173 Ga0075434_100085295
174 Ga0075434_100176363
175 Ga0075429_100110561
176 Ga0075429_100274868
177 Ga0075436_100031044
178 Ga0075436_100085998
179 Ga0097620_100244509
180 Ga0075435_100129666
181 Ga0111539_10001538
182 Ga0111539_10057668
183 Ga0111539_10073504
184 Ga0111539_10264760
185 Ga0111539_10412626
186 Ga0111539_10416892
187 Ga0114129_10000257
188 Ga0114129_10000306
189 Ga0114129_10002632
190 Ga0114129_10011766
191 Ga0114129_10027021
192 Ga0114129_10174906
193 Ga0114129_10192710
194 Ga0114129_10213376
195 Ga0114129_10258884
196 Ga0114129_10268471
197 Ga0105248_10100824
198 Ga0105248_10115528
199 Ga0105248_10152408
200 Ga0157373_10146905
201 Ga0157371_10128252
202 Ga0157380_10014083
203 Ga0157380_10235764
204 Ga0207660_10077562
205 Ga0207709_10020282
206 Ga0207704_10050449
207 Ga0207711_10385386
208 Ga0207679_10135950
209 Ga0207668_10146439
210 Ga0207703_10116392
211 Ga0207708_10007428
212 Ga0207648_10018303
213 Ga0207648_10137251
214 Ga0207675_100003256
215 Ga0207675_100069641
216 Ga0207428_10005045
217 Ga0207428_10169285
218 Ga0268264_10099856
219 Ga0265338_10002893
220 Ga0265316_10032987
221 Ga0307408_100069185
222 Ga0265314_10015966
223 Ga0307405_10231260
224 Ga0307413_10020070
225 Ga0307410_10022459
226 Ga0307410_10072477
227 Ga0307407_10022724
228 Ga0307407_10026014
229 Ga0307412_10030500
230 Ga0307409_100121976
231 Ga0307409_100173303
232 Ga0307415_100113497
233 Ga0373954_0031636
234 Ga0373955_0012693
235 Ga0373937_0004389
236 Ga0373937_0073841
237 Ga0373937_0212645
238 Ga0451577_0024536
239 Ga0453683_0176596
240 Ga0453684_0549411
241 Ga0466967_0194176
242 Ga0495580_0071315
243 Ga0495640_0088410
244 Ga0495613_0007712
245 Ga0495684_0023389
246 Ga0496102_0015215
247 Ga0496103_0060823
248 Ga0496104_0406544
249 Ga0496105_0221575
250 Ga0496114_0053328
251 Ga0496114_0365961
252 Ga0501033_0075897
253 Ga0501036_0263351
254 Ga0501039_0335941
255 Ga0501042_0058003
256 Ga0501042_0089415
257 Ga0501071_0085236
258 Ga0501071_0089193
259 Ga0501072_0008843
260 Ga0501075_0094576
261 Ga0501076_0055284
262 Ga0501076_0143698
263 Ga0501079_0212532
264 Ga0501081_0024393
265 nmdc:mga05p37_2193_c1
266 nmdc:mga05p37_225526_c1
267 nmdc:mga05p37_245653_c1
268 nmdc:mga05p37_4611_c1
269 nmdc:mga05p37_71590_c1
270 nmdc:mga05p37_9_c1
271 nmdc:mga09592_277610_c1
272 nmdc:mga09592_33052_c1
273 nmdc:mga0qj67_359086_c1
274 nmdc:mga06r32_120145_c1
275 nmdc:mga08y16_193066_c1
276 nmdc:mga08y16_22716_c1
277 nmdc:mga08y16_254765_c1
278 nmdc:mga0n895_12564_c1
279 nmdc:mga0n895_8874_c1
280 nmdc:mga0n895_97833_c1
281 nmdc:mga0rr50_113618_c1
282 nmdc:mga0rr50_114821_c1
283 nmdc:mga0a205_69207_c1
284 Ga0501084_0154804
285 Ga0501082_0058100
286 Ga0501082_0134406

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01210

NAD_Gly3P_dh_N

NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus

24

181

0.99

PF07479

NAD_Gly3P_dh_C

NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus

200

341

0.99

PF03446

NAD_binding_2

NAD binding domain of 6-phosphogluconate dehydrogenase

24

126

0.93

PF20618

GPD_NAD_C_bact

Bacterial GPD, NAD-dependent C-terminal

260

326

0.9

PF03807

F420_oxidored

NADP oxidoreductase coenzyme F420-dependent

24

128

0.87

PF02558

ApbA

Ketopantoate reductase PanE/ApbA

25

144

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
3k96-assembly1.cif.gz_B 2.1 angstrom resolution crystal structure of glycerol-3-phosphate dehydrogenase (gpsa) from coxiella burnetii 0.9751 2 325
3k96-assembly1.cif.gz_B 2.1 angstrom resolution crystal structure of glycerol-3-phosphate dehydrogenase (gpsa) from coxiella burnetii 0.9633 2 325
1z82-assembly1.cif.gz_B crystal structure of glycerol-3-phosphate dehydrogenase (tm0378) from thermotoga maritima at 2.00 a resolution 0.9619 3 325
1z82-assembly1.cif.gz_B crystal structure of glycerol-3-phosphate dehydrogenase (tm0378) from thermotoga maritima at 2.00 a resolution 0.9558 3 325
5mbx-assembly1.cif.gz_A crystal structure of reduced murine n1-acetylpolyamine oxidase in complex with n1-acetylspermine 0.9441 1 35
ID Description Score Start End Superfamily
af_P9WN75_188_329_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9762 183 323 1.10.1040.10
af_P9WN77_188_331_1.10.1040.10 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9745 183 325 1.10.1040.10
3k96B02 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9722 187 325 1.10.1040.10
3k96B02 Mainly Alpha;Orthogonal Bundle;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2;N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.9653 187 325 1.10.1040.10
3k96B01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9612 2 184 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A419J550-F1-model_v4 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)(+)-dependent glycerol-3-phosphate dehydrogenase) (NAD(P)H-dependent dihydroxyacetone-phosphate reductase) 0.9859 1 325 GO:0005829
GO:0005975
GO:0006650
GO:0008654
GO:0046167
GO:0046168
GO:0047952
GO:0051287
AF-A0A2V8HG95-F1-model_v4 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)(+)-dependent glycerol-3-phosphate dehydrogenase) (NAD(P)H-dependent dihydroxyacetone-phosphate reductase) 0.9854 4 266 GO:0005829
GO:0005975
GO:0006650
GO:0008654
GO:0046167
GO:0046168
GO:0047952
GO:0051287
AF-A0A661U601-F1-model_v4 Glycerol-3-phosphate dehydrogenase (EC 1.1.1.94) 0.9846 2 270 GO:0005829
GO:0005975
GO:0008654
GO:0046168
GO:0047952
GO:0051287
AF-Q8R9J3-F1-model_v4 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) (NAD(P)(+)-dependent glycerol-3-phosphate dehydrogenase) (NAD(P)H-dependent dihydroxyacetone-phosphate reductase) 0.9841 4 325 GO:0005829
GO:0005975
GO:0006650
GO:0008654
GO:0046167
GO:0046168
GO:0047952
GO:0051287
AF-A0A496T6K4-F1-model_v4 Glycerol-3-phosphate dehydrogenase (EC 1.1.1.94) 0.9838 3 266 GO:0005829
GO:0005975
GO:0008654
GO:0046168
GO:0047952
GO:0051287

Map