F189217

General Info

Members Datasets Scaffolds Average Seq Length
143 27 286 313

Family's Representative Sequence

Representative Sequence 3300031691|Ga0316579_10089933|Ga0316579_100899332
Length 317
Sequence MLEYTEKIQQTAKKLLKDKTVDIFIGYRKGTVPMMNEPVLIRDAGKADRLYWDSFCGLNLCNYLTKRGEGKIGIVATGCNSRNMVTHIVENQIKREQLYIVGIPCTGMIDHRAVQRAVDHKQIVGVSEEGDSFTVKGKDFEKTLEKKDYLQTNCAICRHRNPVITDEMVAEPVKEQAEVAAYKDVEKIEQMASDQRHGFFTQLISRCIRCYACRNACPLCYCPTCFVDESRPQWVGKSIDPVDTMTFHILRAYHCAGRCTDCGACERVCPVGIPVRQFTKKLNKDAEALFSWEAGLHLDQRPPLDVYRPDDYDDFIR

Samples

Sample ID Description Type Environment
1 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
2 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
3 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
4 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
5 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
6 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
7 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
8 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
9 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
10 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
11 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
12 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
13 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
14 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
15 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
16 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
17 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
18 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
19 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
20 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
21 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
22 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
23 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
24 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
25 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
26 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
27 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.41
Metatranscriptomes 4.9
Isolates 0.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 74.13
Stem 0
Stem Tuber 0
Unclassified 2.1

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316579_10089933 3300031691 Bacteria 1466
2 Ga0316575_10000897 3300031665 Bacteria 9126
3 Ga0316575_10006854 3300031665 Bacteria 4118
4 Ga0316575_10012047 3300031665 Unclassified 3210
5 Ga0316575_10015634 3300031665 Bacteria 2862
6 Ga0316575_10018559 3300031665 Bacteria 2653
7 Ga0316575_10044906 3300031665 Bacteria 1753
8 Ga0316575_10089611 3300031665 Bacteria 1245
9 Ga0316575_10096996 3300031665 Bacteria 1197
10 Ga0316579_10005493 3300031691 Bacteria 5123
11 Ga0316579_10006864 3300031691 Bacteria 4670
12 Ga0316579_10010594 3300031691 Bacteria 3902
13 Ga0316579_10010788 3300031691 Bacteria 3870
14 Ga0316579_10046998 3300031691 Bacteria 2015
15 Ga0316579_10115562 3300031691 Bacteria 1288
16 Ga0316579_10133842 3300031691 Bacteria 1195
17 Ga0316576_10005405 3300031727 Bacteria 7801
18 Ga0316576_10005727 3300031727 Bacteria 7645
19 Ga0316576_10006900 3300031727 Bacteria 7099
20 Ga0316576_10008438 3300031727 Bacteria 6571
21 Ga0316576_10013852 3300031727 Bacteria 5374
22 Ga0316576_10037501 3300031727 Bacteria 3470
23 Ga0316576_10052586 3300031727 Bacteria 2966
24 Ga0316576_10062262 3300031727 Bacteria 2736
25 Ga0316576_10069588 3300031727 Bacteria 2595
26 Ga0316576_10084203 3300031727 Bacteria 2363
27 Ga0316576_10110520 3300031727 Bacteria 2060
28 Ga0316576_10134806 3300031727 Bacteria 1858
29 Ga0316576_10179655 3300031727 Bacteria 1596
30 Ga0316578_10000255 3300031728 Bacteria 15959
31 Ga0316578_10002879 3300031728 Bacteria 7699
32 Ga0316578_10005942 3300031728 Bacteria 5976
33 Ga0316578_10036148 3300031728 Bacteria 2843
34 Ga0316578_10066478 3300031728 Bacteria 2129
35 Ga0316578_10074539 3300031728 Bacteria 2012
36 Ga0316578_10117757 3300031728 Bacteria 1596
37 Ga0316578_10131473 3300031728 Bacteria 1506
38 Ga0316577_10000008 3300031733 Bacteria 41093
39 Ga0316577_10001143 3300031733 Bacteria 12149
40 Ga0316577_10007723 3300031733 Bacteria 5743
41 Ga0316577_10010338 3300031733 Bacteria 5037
42 Ga0316577_10016284 3300031733 Bacteria 4095
43 Ga0316577_10026727 3300031733 Bacteria 3215
44 Ga0316577_10026807 3300031733 Bacteria 3211
45 Ga0316577_10043336 3300031733 Bacteria 2517
46 Ga0316577_10098490 3300031733 Bacteria 1638
47 Ga0316577_10224092 3300031733 Bacteria 1063
48 Ga0316583_10002329 3300032133 Bacteria 6556
49 Ga0316583_10007062 3300032133 Bacteria 4039
50 Ga0316583_10008426 3300032133 Bacteria 3719
51 Ga0316583_10015949 3300032133 Bacteria 2706
52 Ga0316583_10015950 3300032133 Bacteria 2705
53 Ga0316583_10018540 3300032133 Bacteria 2498
54 Ga0316583_10031225 3300032133 Bacteria 1896
55 Ga0316585_10002121 3300032137 Bacteria 5326
56 Ga0316585_10005585 3300032137 Bacteria 3556
57 Ga0316585_10014161 3300032137 Bacteria 2381
58 Ga0316585_10038390 3300032137 Bacteria 1522
59 Ga0316580_10005029 3300032139 Bacteria 3848
60 Ga0316580_10009174 3300032139 Bacteria 2973
61 Ga0316580_10018499 3300032139 Bacteria 2143
62 Ga0316580_10019904 3300032139 Bacteria 2064
63 Ga0316580_10025643 3300032139 Bacteria 1823
64 Ga0316593_10009285 3300032168 Bacteria 2771
65 Ga0316593_10070476 3300032168 Bacteria 1208
66 Ga0316592_1001848 3300033524 Bacteria 3536
67 Ga0316592_1004684 3300033524 Bacteria 2555
68 Ga0316588_1025106 3300033528 Bacteria 1375
69 Ga0316596_1004348 3300033541 Bacteria 3172
70 Ga0316596_1011698 3300033541 Bacteria 2150
71 Ga0316574_0002502 3300035398 Bacteria 9227
72 Ga0316574_0018814 3300035398 Bacteria 4066
73 Ga0316574_0021865 3300035398 Bacteria 3801
74 Ga0316582_0001159 3300036647 Bacteria 11255
75 Ga0316582_0001338 3300036647 Bacteria 10702
76 Ga0316582_0001634 3300036647 Bacteria 10011
77 Ga0316582_0004783 3300036647 Bacteria 6898
78 Ga0316582_0007004 3300036647 Bacteria 5974
79 Ga0316582_0010700 3300036647 Bacteria 5035
80 Ga0316582_0013902 3300036647 Bacteria 4549
81 Ga0316582_0030266 3300036647 Bacteria 3296
82 Ga0316582_0053285 3300036647 Bacteria 2573
83 Ga0316582_0056343 3300036647 Bacteria 2507
84 Ga0316582_0061556 3300036647 Bacteria 2407
85 Ga0316582_0066921 3300036647 Unclassified 2317
86 Ga0316582_0068449 3300036647 Bacteria 2293
87 Ga0316582_0077371 3300036647 Bacteria 2165
88 Ga0316582_0089046 3300036647 Bacteria 2028
89 Ga0316582_0127066 3300036647 Unclassified 1710
90 Ga0316582_0157100 3300036647 Bacteria 1539
91 Ga0316582_0183330 3300036647 Bacteria 1425
92 Ga0316582_0374992 3300036647 Bacteria 979
93 Ga0316584_0000005 3300036712 Bacteria 71154
94 Ga0316584_0001352 3300036712 Bacteria 14560
95 Ga0316584_0008568 3300036712 Bacteria 7051
96 Ga0316584_0010665 3300036712 Bacteria 6432
97 Ga0316584_0021590 3300036712 Bacteria 4682
98 Ga0316584_0030299 3300036712 Bacteria 3996
99 Ga0316584_0037237 3300036712 Bacteria 3613
100 Ga0316584_0146599 3300036712 Bacteria 1758
101 Ga0316584_0172940 3300036712 Bacteria 1601
102 Ga0316584_0242722 3300036712 Bacteria 1318
103 Ga0316581_0001113 3300037588 Bacteria 5845
104 Ga0316581_0001365 3300037588 Bacteria 5440
105 Ga0316581_0003069 3300037588 Bacteria 4112
106 Ga0400484_17088 3300038725 Bacteria 7313
107 Ga0400490_09662 3300038726 Bacteria 1669
108 Ga0400490_18040 3300038726 Bacteria 6776
109 Ga0400490_24199 3300038726 Bacteria 46426
110 Ga0400490_42254 3300038726 Bacteria 2309
111 Ga0400490_59107 3300038726 Bacteria 1968
112 Ga0400491_10920 3300038727 Bacteria 2921
113 Ga0400491_18371 3300038727 Bacteria 8285
114 Ga0400485_02583 3300038735 Bacteria 28656
115 Ga0400485_15270 3300038735 Bacteria 6706
116 Ga0400485_19623 3300038735 Bacteria 5563
117 Ga0400485_22039 3300038735 Bacteria 3510
118 Ga0400488_11736 3300038741 Bacteria 2257
119 Ga0400488_38210 3300038741 Bacteria 2729
120 Ga0400486_04029 3300038742 Bacteria 63930
121 Ga0400486_05035 3300038742 Bacteria 38593
122 Ga0400486_09392 3300038742 Bacteria 9336
123 Ga0400486_14505 3300038742 Bacteria 66302
124 Ga0400486_23241 3300038742 Bacteria 32107
125 Ga0400483_010410 3300039062 Bacteria 15374
126 Ga0400483_095319 3300039062 Bacteria 29855
127 Ga0400483_110554 3300039062 Bacteria 2279
128 Ga0400483_142841 3300039062 Bacteria 2329
129 Ga0400483_163314 3300039062 Bacteria 6863
130 Ga0400483_272777 3300039062 Bacteria 5235
131 Ga0400483_273721 3300039062 Bacteria 14123
132 Ga0400489_01551 3300039093 Bacteria 26932
133 Ga0400489_26587 3300039093 Bacteria 16557
134 Ga0400489_58634 3300039093 Bacteria 20114
135 Ga0400489_61543 3300039093 Bacteria 71464
136 Ga0400489_64603 3300039093 Bacteria 19023
137 Ga0400489_73535 3300039093 Bacteria 1119
138 Ga0400487_19006 3300039110 Bacteria 3075
139 Ga0400487_25326 3300039110 Bacteria 41174
140 Ga0400487_36045 3300039110 Bacteria 1887
141 Ga0400487_61538 3300039110 Bacteria 13390
142 Ga0453683_0156894 3300044673 Bacteria 1439
143 2740991087 2740891818 Bacteria 6711283
144 Ga0316579_10089933
145 Ga0316575_10000897
146 Ga0316575_10006854
147 Ga0316575_10012047
148 Ga0316575_10015634
149 Ga0316575_10018559
150 Ga0316575_10044906
151 Ga0316575_10089611
152 Ga0316575_10096996
153 Ga0316579_10005493
154 Ga0316579_10006864
155 Ga0316579_10010594
156 Ga0316579_10010788
157 Ga0316579_10046998
158 Ga0316579_10115562
159 Ga0316579_10133842
160 Ga0316576_10005405
161 Ga0316576_10005727
162 Ga0316576_10006900
163 Ga0316576_10008438
164 Ga0316576_10013852
165 Ga0316576_10037501
166 Ga0316576_10052586
167 Ga0316576_10062262
168 Ga0316576_10069588
169 Ga0316576_10084203
170 Ga0316576_10110520
171 Ga0316576_10134806
172 Ga0316576_10179655
173 Ga0316578_10000255
174 Ga0316578_10002879
175 Ga0316578_10005942
176 Ga0316578_10036148
177 Ga0316578_10066478
178 Ga0316578_10074539
179 Ga0316578_10117757
180 Ga0316578_10131473
181 Ga0316577_10000008
182 Ga0316577_10001143
183 Ga0316577_10007723
184 Ga0316577_10010338
185 Ga0316577_10016284
186 Ga0316577_10026727
187 Ga0316577_10026807
188 Ga0316577_10043336
189 Ga0316577_10098490
190 Ga0316577_10224092
191 Ga0316583_10002329
192 Ga0316583_10007062
193 Ga0316583_10008426
194 Ga0316583_10015949
195 Ga0316583_10015950
196 Ga0316583_10018540
197 Ga0316583_10031225
198 Ga0316585_10002121
199 Ga0316585_10005585
200 Ga0316585_10014161
201 Ga0316585_10038390
202 Ga0316580_10005029
203 Ga0316580_10009174
204 Ga0316580_10018499
205 Ga0316580_10019904
206 Ga0316580_10025643
207 Ga0316593_10009285
208 Ga0316593_10070476
209 Ga0316592_1001848
210 Ga0316592_1004684
211 Ga0316588_1025106
212 Ga0316596_1004348
213 Ga0316596_1011698
214 Ga0316574_0002502
215 Ga0316574_0018814
216 Ga0316574_0021865
217 Ga0316582_0001159
218 Ga0316582_0001338
219 Ga0316582_0001634
220 Ga0316582_0004783
221 Ga0316582_0007004
222 Ga0316582_0010700
223 Ga0316582_0013902
224 Ga0316582_0030266
225 Ga0316582_0053285
226 Ga0316582_0056343
227 Ga0316582_0061556
228 Ga0316582_0066921
229 Ga0316582_0068449
230 Ga0316582_0077371
231 Ga0316582_0089046
232 Ga0316582_0127066
233 Ga0316582_0157100
234 Ga0316582_0183330
235 Ga0316582_0374992
236 Ga0316584_0000005
237 Ga0316584_0001352
238 Ga0316584_0008568
239 Ga0316584_0010665
240 Ga0316584_0021590
241 Ga0316584_0030299
242 Ga0316584_0037237
243 Ga0316584_0146599
244 Ga0316584_0172940
245 Ga0316584_0242722
246 Ga0316581_0001113
247 Ga0316581_0001365
248 Ga0316581_0003069
249 Ga0400484_17088
250 Ga0400490_09662
251 Ga0400490_18040
252 Ga0400490_24199
253 Ga0400490_42254
254 Ga0400490_59107
255 Ga0400491_10920
256 Ga0400491_18371
257 Ga0400485_02583
258 Ga0400485_15270
259 Ga0400485_19623
260 Ga0400485_22039
261 Ga0400488_11736
262 Ga0400488_38210
263 Ga0400486_04029
264 Ga0400486_05035
265 Ga0400486_09392
266 Ga0400486_14505
267 Ga0400486_23241
268 Ga0400483_010410
269 Ga0400483_095319
270 Ga0400483_110554
271 Ga0400483_142841
272 Ga0400483_163314
273 Ga0400483_272777
274 Ga0400483_273721
275 Ga0400489_01551
276 Ga0400489_26587
277 Ga0400489_58634
278 Ga0400489_61543
279 Ga0400489_64603
280 Ga0400489_73535
281 Ga0400487_19006
282 Ga0400487_25326
283 Ga0400487_36045
284 Ga0400487_61538
285 Ga0453683_0156894
286 2740991087

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13183

Fer4_8

4Fe-4S dicluster domain

203

273

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
7xfr-assembly1.cif.gz_C-2 crystal structure of wipi2b in complex with the second site of atg16l1 0.8967 117 147
7mu2-assembly1.cif.gz_A crystal structure of wipi2 in complex with w2ir of atg16l1 0.8927 117 147
7f69-assembly1.cif.gz_A crystal structure of wipi2b in complex with atg16l1 0.8855 117 147
3vu4-assembly3.cif.gz_B crystal structure of kluyvelomyces marxianus hsv2 0.8814 117 143
7mu2-assembly2.cif.gz_C crystal structure of wipi2 in complex with w2ir of atg16l1 0.8806 117 147
ID Description Score Start End Superfamily
af_A4HSP6_564_675_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.9362 117 143 2.130.10.10
af_A4I8M2_273_434_2.40.128.630 Mainly Beta;Beta Barrel;Lipocalin; 0.9337 117 143 2.40.128.630
af_Q6K9M2_60_275_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.932 117 143 2.130.10.10
af_Q9VYT5_394_580_2.130.10.10 Mainly Beta;7 Propeller;Methylamine Dehydrogenase; Chain H;YVTN repeat-like/Quinoprotein amine dehydrogenase 0.924 120 143 2.130.10.10
af_A0A0G2K4H2_576_753_2.40.128.630 Mainly Beta;Beta Barrel;Lipocalin; 0.9195 117 143 2.40.128.630
ID Description Score Start End GO Terms
AF-A0A7X6VTQ7-F1-model_v4 4Fe-4S ferredoxin 0.993 5 53
AF-A0A0F8X3I9-F1-model_v4 Uncharacterized protein 0.9917 5 60
AF-A0A3D0H0S0-F1-model_v4 4Fe-4S ferredoxin 0.9866 4 119
AF-X0X8T4-F1-model_v4 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain-containing protein 0.9842 5 165
AF-A0A0F8WCC8-F1-model_v4 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain-containing protein 0.9747 1 156

Map