F189067

General Info

Members Datasets Scaffolds Average Seq Length
143 67 286 371

Family's Representative Sequence

Representative Sequence 3300028563|Ga0265319_1014706|Ga0265319_10147062
Length 388
Sequence MPIPKILVIDDQPINVQLLKRKLEREGLEVVAASNGKDGLDLIARLKPDLVLLDVMMPDMNGIEVCQQLQASEETRAIPVIFITARTTKESKLEGLGVGAVDYITKPIDLDETLARVQTQLRFVAINREMVDLQRRLEEARRAATIGAVTQGIAHNLNNLLGVAIGYLDLIKVSADKPAQVQNSIQHIDTALHRIVAIIRQLSSLEIKARPPVAKAALAAVIREAAERFNRICKTSMVVAVDNPLGDLPIETNVEMIEDVLSKILVNAWEAYDTPEETPRPISITTRLLDLGATGMFAEIRVDDRGHGILDEVRDQLFEPFVSTKHTVGVGMGLTVARHALRNLGGEITVVDRPGGGASAILRHPLEKQPPLEDTNAEALARMEPLTP

Samples

Sample ID Description Type Environment
1 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
7 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
8 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
9 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
10 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
11 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
12 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
13 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
14 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
15 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
16 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
19 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
23 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
24 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
25 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
26 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
27 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
28 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
29 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
30 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
31 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
32 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
33 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
34 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
35 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
36 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
37 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
38 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
39 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
40 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
41 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
42 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
43 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
44 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
45 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
46 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
47 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
48 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
49 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
50 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
51 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
52 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
53 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
54 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
55 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
56 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
57 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
58 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
59 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
60 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
61 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
62 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
63 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
64 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
65 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
66 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
67 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.6
Metatranscriptomes 0.7
Isolates 0.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.4
Nodule 0
Rhizoplane 0
Rhizosphere 94.41
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265319_1014706 3300028563 Bacteria 3061
2 rootH2_10002272 3300003320 Bacteria 8486
3 rootH1_10046946 3300003323 Bacteria 3001
4 rootH1_10080470 3300003323 Bacteria 2043
5 Ga0070683_100002294 3300005329 Bacteria 15171
6 Ga0070683_100022787 3300005329 Bacteria 5601
7 Ga0068869_100000381 3300005334 Bacteria 24096
8 Ga0068867_100039406 3300005459 Bacteria 3445
9 Ga0070679_100008899 3300005530 Bacteria 9474
10 Ga0068855_100319393 3300005563 Bacteria 1717
11 Ga0068856_100002464 3300005614 Bacteria 19053
12 Ga0070717_10000037 3300006028 Bacteria 121470
13 Ga0097621_100066656 3300006237 Bacteria 2966
14 Ga0068865_100007715 3300006881 Bacteria 6632
15 Ga0105240_10230835 3300009093 Bacteria 2151
16 Ga0157374_10435550 3300013296 Bacteria 1311
17 Ga0206356_10797531 3300020070 Bacteria 1796
18 Ga0207652_10059008 3300025921 Bacteria 3307
19 Ga0207704_10008840 3300025938 Bacteria 4836
20 Ga0207689_10013039 3300025942 Bacteria 7098
21 Ga0207661_10013813 3300025944 Bacteria 5903
22 Ga0207661_10032858 3300025944 Bacteria 4024
23 Ga0207702_10000570 3300026078 Bacteria 40941
24 Ga0207702_10151670 3300026078 Bacteria 2108
25 Ga0207648_10021735 3300026089 Bacteria 5765
26 Ga0265319_1000046 3300028563 Bacteria 101716
27 Ga0265319_1001092 3300028563 Bacteria 16863
28 Ga0265319_1001446 3300028563 Bacteria 14186
29 Ga0265319_1003652 3300028563 Bacteria 7940
30 Ga0265319_1007392 3300028563 Bacteria 4947
31 Ga0265319_1015917 3300028563 Bacteria 2895
32 Ga0265334_10003312 3300028573 Bacteria 7344
33 Ga0265334_10011724 3300028573 Bacteria 3685
34 Ga0265318_10000285 3300028577 Bacteria 41459
35 Ga0265318_10000713 3300028577 Bacteria 22300
36 Ga0265318_10003379 3300028577 Bacteria 8042
37 Ga0265318_10005469 3300028577 Bacteria 5964
38 Ga0265318_10008649 3300028577 Bacteria 4515
39 Ga0265318_10012074 3300028577 Bacteria 3689
40 Ga0265318_10014522 3300028577 Bacteria 3305
41 Ga0265318_10023401 3300028577 Bacteria 2462
42 Ga0265323_10000152 3300028653 Bacteria 40620
43 Ga0265323_10008378 3300028653 Bacteria 4265
44 Ga0265323_10009552 3300028653 Bacteria 3955
45 Ga0265323_10020562 3300028653 Bacteria 2540
46 Ga0265323_10030729 3300028653 Bacteria 1999
47 Ga0265323_10059383 3300028653 Bacteria 1334
48 Ga0265322_10000429 3300028654 Bacteria 17051
49 Ga0265336_10005974 3300028666 Bacteria 4439
50 Ga0307515_10090456 3300028794 Bacteria 3838
51 Ga0265338_10008140 3300028800 Bacteria 12797
52 Ga0265338_10023147 3300028800 Bacteria 6397
53 Ga0265338_10098738 3300028800 Bacteria 2388
54 Ga0265324_10031731 3300029957 Bacteria 1849
55 Ga0265330_10004434 3300031235 Bacteria 7126
56 Ga0265330_10048218 3300031235 Bacteria 1873
57 Ga0265320_10000032 3300031240 Bacteria 141785
58 Ga0265320_10002221 3300031240 Bacteria 13622
59 Ga0265320_10002315 3300031240 Bacteria 13366
60 Ga0265320_10005064 3300031240 Bacteria 8523
61 Ga0265320_10005401 3300031240 Bacteria 8212
62 Ga0265320_10006022 3300031240 Bacteria 7704
63 Ga0265320_10006773 3300031240 Bacteria 7185
64 Ga0265320_10006866 3300031240 Bacteria 7127
65 Ga0265320_10017314 3300031240 Bacteria 4004
66 Ga0265320_10022133 3300031240 Bacteria 3406
67 Ga0265320_10057304 3300031240 Bacteria 1869
68 Ga0265340_10063262 3300031247 Bacteria 1766
69 Ga0265340_10092858 3300031247 Bacteria 1409
70 Ga0265331_10051365 3300031250 Bacteria 1973
71 Ga0265327_10000088 3300031251 Bacteria 198019
72 Ga0265327_10016765 3300031251 Bacteria 4630
73 Ga0265327_10022764 3300031251 Bacteria 3732
74 Ga0265316_10007319 3300031344 Bacteria 10409
75 Ga0265316_10012713 3300031344 Bacteria 7526
76 Ga0265316_10033051 3300031344 Bacteria 4217
77 Ga0265316_10125709 3300031344 Bacteria 1934
78 Ga0265316_10155889 3300031344 Bacteria 1709
79 Ga0307408_100000007 3300031548 Bacteria 463086
80 Ga0265313_10000973 3300031595 Bacteria 28336
81 Ga0265313_10002363 3300031595 Bacteria 16429
82 Ga0265313_10003037 3300031595 Bacteria 13948
83 Ga0265313_10005807 3300031595 Bacteria 8961
84 Ga0265313_10006949 3300031595 Bacteria 7859
85 Ga0307508_10000027 3300031616 Bacteria 171013
86 Ga0265314_10002413 3300031711 Bacteria 19182
87 Ga0265314_10010894 3300031711 Bacteria 7557
88 Ga0265314_10015243 3300031711 Bacteria 6104
89 Ga0265314_10075341 3300031711 Bacteria 2245
90 Ga0265314_10138759 3300031711 Bacteria 1506
91 Ga0265314_10144739 3300031711 Bacteria 1465
92 Ga0265342_10003653 3300031712 Bacteria 12505
93 Ga0307410_10000053 3300031852 Bacteria 40797
94 Ga0307407_10007479 3300031903 Bacteria 4948
95 Ga0307412_10148321 3300031911 Bacteria 1727
96 Ga0307409_100000152 3300031995 Bacteria 26310
97 Ga0307416_100055550 3300032002 Bacteria 3190
98 Ga0395905_0000018 3300037471 Bacteria 369321
99 Ga0395905_0123668 3300037471 Bacteria 2433
100 Ga0451577_0002510 3300042876 Bacteria 21732
101 Ga0451577_0262207 3300042876 Bacteria 1565
102 Ga0453683_0001284 3300044673 Bacteria 22251
103 Ga0453683_0031505 3300044673 Bacteria 3350
104 Ga0453684_0001010 3300044712 Bacteria 90816
105 Ga0453684_0069500 3300044712 Bacteria 4465
106 Ga0453684_0107429 3300044712 Bacteria 3398
107 Ga0453684_0394106 3300044712 Bacteria 1552
108 Ga0451576_0001322 3300045051 Bacteria 42888
109 Ga0451576_0006495 3300045051 Bacteria 14321
110 Ga0451576_0078491 3300045051 Bacteria 3436
111 Ga0451576_0100847 3300045051 Bacteria 3002
112 Ga0451576_0407011 3300045051 Bacteria 1427
113 Ga0466967_0017683 3300045976 Bacteria 5671
114 Ga0501032_0001360 3300049569 Bacteria 19452
115 Ga0501032_0002398 3300049569 Bacteria 14605
116 Ga0501033_0002973 3300049570 Bacteria 14157
117 Ga0501033_0005059 3300049570 Bacteria 10500
118 Ga0501034_0178901 3300049571 Bacteria 2086
119 Ga0501038_0001592 3300049574 Bacteria 21061
120 Ga0501039_0008362 3300049575 Bacteria 7886
121 Ga0501042_0011768 3300049578 Bacteria 5910
122 Ga0501046_0001002 3300049580 Bacteria 27612
123 Ga0501046_0020072 3300049580 Bacteria 5533
124 Ga0501046_0033994 3300049580 Bacteria 4116
125 Ga0501046_0083214 3300049580 Bacteria 2470
126 Ga0501046_0183877 3300049580 Bacteria 1561
127 Ga0501047_0013719 3300049581 Bacteria 7693
128 Ga0501047_0048285 3300049581 Bacteria 4110
129 Ga0501047_0242942 3300049581 Bacteria 1650
130 Ga0501047_0469639 3300049581 Bacteria 1086
131 Ga0501048_0047932 3300049582 Bacteria 3047
132 Ga0501070_0088947 3300049586 Bacteria 2556
133 Ga0501070_0150141 3300049586 Bacteria 1923
134 Ga0501083_0000237 3300049744 Bacteria 35480
135 Ga0501083_0004097 3300049744 Bacteria 10260
136 Ga0501035_0000932 3300049822 Bacteria 30968
137 Ga0501035_0202290 3300049822 Bacteria 1702
138 Ga0501044_0000371 3300049823 Bacteria 56211
139 Ga0501044_0004412 3300049823 Bacteria 15742
140 Ga0501044_0014648 3300049823 Bacteria 8456
141 Ga0500568_0016112 3300053139 Bacteria 3330
142 Ga0500622_0014546 3300053156 Bacteria 4224
143 2788435091 2786546940 Bacteria 6396474
144 Ga0265319_1014706
145 rootH2_10002272
146 rootH1_10046946
147 rootH1_10080470
148 Ga0070683_100002294
149 Ga0070683_100022787
150 Ga0068869_100000381
151 Ga0068867_100039406
152 Ga0070679_100008899
153 Ga0068855_100319393
154 Ga0068856_100002464
155 Ga0070717_10000037
156 Ga0097621_100066656
157 Ga0068865_100007715
158 Ga0105240_10230835
159 Ga0157374_10435550
160 Ga0206356_10797531
161 Ga0207652_10059008
162 Ga0207704_10008840
163 Ga0207689_10013039
164 Ga0207661_10013813
165 Ga0207661_10032858
166 Ga0207702_10000570
167 Ga0207702_10151670
168 Ga0207648_10021735
169 Ga0265319_1000046
170 Ga0265319_1001092
171 Ga0265319_1001446
172 Ga0265319_1003652
173 Ga0265319_1007392
174 Ga0265319_1015917
175 Ga0265334_10003312
176 Ga0265334_10011724
177 Ga0265318_10000285
178 Ga0265318_10000713
179 Ga0265318_10003379
180 Ga0265318_10005469
181 Ga0265318_10008649
182 Ga0265318_10012074
183 Ga0265318_10014522
184 Ga0265318_10023401
185 Ga0265323_10000152
186 Ga0265323_10008378
187 Ga0265323_10009552
188 Ga0265323_10020562
189 Ga0265323_10030729
190 Ga0265323_10059383
191 Ga0265322_10000429
192 Ga0265336_10005974
193 Ga0307515_10090456
194 Ga0265338_10008140
195 Ga0265338_10023147
196 Ga0265338_10098738
197 Ga0265324_10031731
198 Ga0265330_10004434
199 Ga0265330_10048218
200 Ga0265320_10000032
201 Ga0265320_10002221
202 Ga0265320_10002315
203 Ga0265320_10005064
204 Ga0265320_10005401
205 Ga0265320_10006022
206 Ga0265320_10006773
207 Ga0265320_10006866
208 Ga0265320_10017314
209 Ga0265320_10022133
210 Ga0265320_10057304
211 Ga0265340_10063262
212 Ga0265340_10092858
213 Ga0265331_10051365
214 Ga0265327_10000088
215 Ga0265327_10016765
216 Ga0265327_10022764
217 Ga0265316_10007319
218 Ga0265316_10012713
219 Ga0265316_10033051
220 Ga0265316_10125709
221 Ga0265316_10155889
222 Ga0307408_100000007
223 Ga0265313_10000973
224 Ga0265313_10002363
225 Ga0265313_10003037
226 Ga0265313_10005807
227 Ga0265313_10006949
228 Ga0307508_10000027
229 Ga0265314_10002413
230 Ga0265314_10010894
231 Ga0265314_10015243
232 Ga0265314_10075341
233 Ga0265314_10138759
234 Ga0265314_10144739
235 Ga0265342_10003653
236 Ga0307410_10000053
237 Ga0307407_10007479
238 Ga0307412_10148321
239 Ga0307409_100000152
240 Ga0307416_100055550
241 Ga0395905_0000018
242 Ga0395905_0123668
243 Ga0451577_0002510
244 Ga0451577_0262207
245 Ga0453683_0001284
246 Ga0453683_0031505
247 Ga0453684_0001010
248 Ga0453684_0069500
249 Ga0453684_0107429
250 Ga0453684_0394106
251 Ga0451576_0001322
252 Ga0451576_0006495
253 Ga0451576_0078491
254 Ga0451576_0100847
255 Ga0451576_0407011
256 Ga0466967_0017683
257 Ga0501032_0001360
258 Ga0501032_0002398
259 Ga0501033_0002973
260 Ga0501033_0005059
261 Ga0501034_0178901
262 Ga0501038_0001592
263 Ga0501039_0008362
264 Ga0501042_0011768
265 Ga0501046_0001002
266 Ga0501046_0020072
267 Ga0501046_0033994
268 Ga0501046_0083214
269 Ga0501046_0183877
270 Ga0501047_0013719
271 Ga0501047_0048285
272 Ga0501047_0242942
273 Ga0501047_0469639
274 Ga0501048_0047932
275 Ga0501070_0088947
276 Ga0501070_0150141
277 Ga0501083_0000237
278 Ga0501083_0004097
279 Ga0501035_0000932
280 Ga0501035_0202290
281 Ga0501044_0000371
282 Ga0501044_0004412
283 Ga0501044_0014648
284 Ga0500568_0016112
285 Ga0500622_0014546
286 2788435091

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

6

118

0.97

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

252

368

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
6rh1-assembly1.cif.gz_C revisiting ph-gated conformational switch. complex hk853-rr468 d53a ph 7 0.9875 3 121
1nxx-assembly1.cif.gz_A-2 micarec ph 5.5 0.9873 4 122
6rfv-assembly1.cif.gz_C revisiting ph-gated conformational switch. complex hk853-rr468 ph 7 0.9823 3 121
8fk2-assembly1.cif.gz_B the n-terminal vicr from streptococcus mutans 0.9817 3 125
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9807 4 122
ID Description Score Start End Superfamily
4ja2A00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9865 3 122 3.40.50.2300
af_P9WGM1_5_87_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.984 1 82 3.40.50.2300
af_Q06065_2_134_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9805 1 134 3.40.50.2300
1nxoA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9767 4 122 3.40.50.2300
1m5uA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9742 3 121 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A7X6HS16-F1-model_v4 Response regulator 0.9963 1 71 GO:0000160
AF-A0A258BFB1-F1-model_v4 Hybrid sensor histidine kinase/response regulator 0.9917 1 85 GO:0000160
GO:0016301
AF-A0A7R8ZVL0-F1-model_v4 Response regulatory domain-containing protein 0.99 2 79 GO:0000160
AF-A0A2W4LBZ9-F1-model_v4 Response regulatory domain-containing protein 0.9846 3 125 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A7V2W325-F1-model_v4 Response regulator transcription factor 0.9842 5 122 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993

Map