F187002

General Info

Members Datasets Scaffolds Average Seq Length
142 115 284 501

Family's Representative Sequence

Representative Sequence 3300049591|Ga0501075_0030671|Ga0501075_0030671_1608_3188
Length 526
Sequence MAGLEFRDVRKSFGAVRALTGVSFRVAENEAHALVGENGAGKSTLLKILAGIVRPDGGAVIWRDEHIELARPKDALERGIGMVYQEMLCFPNLSVAANIFAGRELTRGGRLLDAEMRRRTRTLLDELHLSIDPDARAESLSAAHRQLLQVARALAFQCQILVLDEPTTSLTDAEADHLFAVLHRLKRQGTTLLYVSHRIPEVFRLCDRITVLRDGGYVGTYERTAIAPDAIVRAMVGRDLPHRVESAPPSAAEGPAIEVVDLTRRPCFEHVSLSVAPGEIVGLFGLVGSGRSELLETLFGLHAPGGGEIRIRGRAVHFRSARDAARAGIALVPEERQRQGLFFNLNIRHNLVMPRRIVRGDVRVRAADERREAGALVSEWRIKASSVDAPPDSLSGGNQQKIVVAKWLATAPSVLLLDEPTKGVDVGAKFEIHAMIRRQAEAGLACLVVSSDLPEVLSIAQRVIVMREGIVRGVLAGPEATEEAIMQLATHESDRNGAGRSPGALGAAGPAAGDPAGPGEDRVHAP

Samples

Sample ID Description Type Environment
1 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
2 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
3 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
14 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
17 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
18 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
19 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
20 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
23 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
24 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
29 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
31 3300006943 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW Metagenome Nodule
32 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
33 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
36 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
37 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
38 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
39 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
40 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
41 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
42 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
43 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
44 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
45 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
46 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
61 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
62 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
63 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
65 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
66 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
67 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
68 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
69 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
70 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
71 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
72 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
73 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
74 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
75 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
76 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
77 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
78 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
79 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
80 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
81 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
83 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
84 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
88 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
89 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
90 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
91 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
92 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
93 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
94 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
95 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
96 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
97 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
98 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
99 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
100 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
101 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
102 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
103 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
104 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
105 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
106 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
107 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
108 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
109 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
110 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
111 2687453129 Halotalea alkalilenta IHB B 13600 Isolate Unclassified
112 2909042592 Labrys sp. LIt4 Isolate Nodule
113 2932401849 Devosia sp. 2618 Isolate Rhizosphere
114 2939669807 Kaistia defluvii 3207 Isolate Rhizosphere
115 8018150411 Rhizobium straminoryzae SM12 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 95.77
Metatranscriptomes 0
Isolates 4.23

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.27
Nodule 4.93
Rhizoplane 0
Rhizosphere 81.69
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501075_0030671 3300049591 Bacteria 3984
2 Ga0055526_1008573 3300003771 Bacteria 5069
3 Ga0055528_1000597 3300003790 Bacteria 27186
4 Ga0065707_10007099 3300005295 Bacteria 3866
5 Ga0070670_100007123 3300005331 Bacteria 9469
6 Ga0070670_100087225 3300005331 Bacteria 2682
7 Ga0070689_100011957 3300005340 Bacteria 6235
8 Ga0070669_100012979 3300005353 Bacteria 5917
9 Ga0070671_100032107 3300005355 Bacteria 4342
10 Ga0070673_100080899 3300005364 Bacteria 2633
11 Ga0070688_100050933 3300005365 Bacteria 2581
12 Ga0070713_100117635 3300005436 Bacteria 2326
13 Ga0068867_100006053 3300005459 Bacteria 8574
14 Ga0070684_100017391 3300005535 Bacteria 5901
15 Ga0070695_100035388 3300005545 Bacteria 3137
16 Ga0068859_100234164 3300005617 Bacteria 1925
17 Ga0068866_10058646 3300005718 Bacteria 1989
18 Ga0068861_100137426 3300005719 Bacteria 1990
19 Ga0068862_100054861 3300005844 Bacteria 3412
20 Ga0081540_1003150 3300005983 Bacteria 13180
21 Ga0075365_10007765 3300006038 Bacteria 6041
22 Ga0075364_10003529 3300006051 Bacteria 8899
23 Ga0075364_10021332 3300006051 Bacteria 4081
24 Ga0075364_10098026 3300006051 Bacteria 1950
25 Ga0075367_10036561 3300006178 Bacteria 2849
26 Ga0075366_10030449 3300006195 Bacteria 3173
27 Ga0075370_10011415 3300006353 Bacteria 4667
28 Ga0075428_100063986 3300006844 Bacteria 4028
29 Ga0075428_100124781 3300006844 Bacteria 2802
30 Ga0075428_100129141 3300006844 Bacteria 2750
31 Ga0075430_100032117 3300006846 Bacteria 4456
32 Ga0075431_100000587 3300006847 Bacteria 30894
33 Ga0075431_100057974 3300006847 Bacteria 3994
34 Ga0075429_100076349 3300006880 Bacteria 2918
35 Ga0097620_100234148 3300006931 Bacteria 1925
36 Ga0099824_1018197 3300006942 Bacteria 5839
37 Ga0099822_1025544 3300006943 Bacteria 5113
38 Ga0075435_100005956 3300007076 Bacteria 8577
39 Ga0105240_10011088 3300009093 Bacteria 12602
40 Ga0114129_10031289 3300009147 Bacteria 7525
41 Ga0114129_10044784 3300009147 Bacteria 6223
42 Ga0114129_10048977 3300009147 Bacteria 5939
43 Ga0114129_10090955 3300009147 Bacteria 4229
44 Ga0105243_10065169 3300009148 Bacteria 2926
45 Ga0105248_10016113 3300009177 Bacteria 8225
46 Ga0105237_10000529 3300009545 Bacteria 53671
47 Ga0105238_10024808 3300009551 Bacteria 6111
48 Ga0105249_10057624 3300009553 Bacteria 3559
49 Ga0105239_10000802 3300010375 Bacteria 44448
50 Ga0105239_10016452 3300010375 Bacteria 8179
51 Ga0105239_10148181 3300010375 Bacteria 2618
52 Ga0157372_10115369 3300013307 Bacteria 3079
53 Ga0157380_10015773 3300014326 Bacteria 5558
54 Ga0157380_10021601 3300014326 Bacteria 4830
55 Ga0209673_1000255 3300025273 Bacteria 100723
56 Ga0209564_1000215 3300025295 Bacteria 132838
57 Ga0209256_1000155 3300025299 Bacteria 144379
58 Ga0207695_10058026 3300025913 Bacteria 4019
59 Ga0207671_10016474 3300025914 Bacteria 5742
60 Ga0207660_10051485 3300025917 Bacteria 2927
61 Ga0207662_10013233 3300025918 Bacteria 4612
62 Ga0207650_10077218 3300025925 Bacteria 2517
63 Ga0207700_10097800 3300025928 Bacteria 2333
64 Ga0207706_10080089 3300025933 Bacteria 2872
65 Ga0207691_10024040 3300025940 Bacteria 5732
66 Ga0207651_10008146 3300025960 Bacteria 5639
67 Ga0207639_10041803 3300026041 Bacteria 3432
68 Ga0207708_10002023 3300026075 Bacteria 14946
69 Ga0207648_10008403 3300026089 Bacteria 9999
70 Ga0207675_100051102 3300026118 Bacteria 3857
71 Ga0207683_10100964 3300026121 Bacteria 2576
72 Ga0209589_1000042 3300027357 Bacteria 122436
73 Ga0209489_100095 3300027361 Bacteria 122436
74 Ga0209700_100095 3300027363 Bacteria 122436
75 Ga0209588_1007850 3300027671 Bacteria 3153
76 Ga0265328_10032941 3300031239 Bacteria 1922
77 Ga0265325_10052898 3300031241 Bacteria 2083
78 Ga0265339_10006996 3300031249 Bacteria 7332
79 Ga0265327_10016548 3300031251 Bacteria 4675
80 Ga0265316_10057174 3300031344 Bacteria 3043
81 Ga0307408_100037712 3300031548 Bacteria 3405
82 Ga0307408_100168038 3300031548 Bacteria 1749
83 Ga0307508_10075445 3300031616 Bacteria 2949
84 Ga0307410_10094828 3300031852 Bacteria 2126
85 Ga0307412_10011847 3300031911 Bacteria 5063
86 Ga0307416_100058093 3300032002 Bacteria 3134
87 Ga0307415_100009475 3300032126 Bacteria 5463
88 Ga0307510_10032764 3300033180 Bacteria 5850
89 Ga0373937_0002908 3300036401 Bacteria 14312
90 Ga0395900_0136628 3300037418 Bacteria 2512
91 Ga0436360_0076178 3300039438 Bacteria 3545
92 Ga0439449_0004855 3300042007 Bacteria 5183
93 Ga0439434_0014508 3300042435 Bacteria 2344
94 Ga0501034_0075055 3300049571 Bacteria 3389
95 Ga0501036_0008260 3300049572 Bacteria 8534
96 Ga0501036_0036704 3300049572 Bacteria 4148
97 Ga0501040_0049920 3300049576 Bacteria 2861
98 Ga0501041_0010718 3300049577 Bacteria 5408
99 Ga0501041_0066124 3300049577 Bacteria 2215
100 Ga0501042_0033283 3300049578 Bacteria 3654
101 Ga0501046_0086476 3300049580 Bacteria 2417
102 Ga0501047_0083111 3300049581 Bacteria 3078
103 Ga0501072_0037549 3300049588 Bacteria 3799
104 Ga0501074_0087459 3300049590 Bacteria 2232
105 Ga0501075_0011771 3300049591 Bacteria 6202
106 Ga0501076_0052910 3300049592 Bacteria 3217
107 Ga0501076_0235398 3300049592 Bacteria 1497
108 Ga0501077_0023495 3300049593 Bacteria 3910
109 Ga0501081_0004670 3300049743 Bacteria 8802
110 Ga0501035_0091890 3300049822 Bacteria 2671
111 Ga0501045_0005118 3300049824 Bacteria 9072
112 Ga0501045_0038450 3300049824 Bacteria 3480
113 Ga0501045_0084811 3300049824 Bacteria 2337
114 Ga0501045_0125746 3300049824 Bacteria 1905
115 nmdc:mga00v17_45237_c1 3300050491 Bacteria 2659
116 nmdc:mga0yw44_11460_c1 3300050492 Bacteria 4579
117 nmdc:mga0k408_14486_c1 3300050493 Bacteria 4346
118 nmdc:mga06z11_62934_c1 3300050494 Bacteria 1940
119 nmdc:mga05p37_106020_c1 3300050507 Bacteria 3457
120 nmdc:mga05p37_26100_c1 3300050507 Bacteria 7104
121 nmdc:mga05p37_37791_c1 3300050507 Bacteria 5922
122 nmdc:mga0qj67_31088_c1 3300050509 Bacteria 4158
123 nmdc:mga06r32_43569_c1 3300050510 Bacteria 4270
124 nmdc:mga06r32_5835_c1 3300050510 Bacteria 11087
125 nmdc:mga08y16_193298_c1 3300050511 Bacteria 2110
126 nmdc:mga08y16_204112_c1 3300050511 Bacteria 2048
127 nmdc:mga08y16_279029_c1 3300050511 Bacteria 1724
128 nmdc:mga0rr50_143104_c1 3300050513 Bacteria 1925
129 nmdc:mga0rr50_51077_c1 3300050513 Bacteria 3067
130 Ga0501084_0015464 3300054114 Bacteria 6328
131 Ga0501084_0078988 3300054114 Bacteria 2758
132 Ga0590071_000642 3300059421 Bacteria 9937
133 Ga0590074_000538 3300059423 Bacteria 5688
134 Ga0590077_003534 3300059426 Bacteria 3236
135 Ga0501082_0122973 3300060353 Bacteria 2250
136 Ga0530510_0109935 3300061734 Bacteria 2018
137 2509151674 2508501128 Bacteria 8613869
138 2687580440 2687453129 Bacteria 4387428
139 2909043335 2909042592 Bacteria 6499737
140 2932404337 2932401849 Bacteria 4262978
141 2939671884 2939669807 Bacteria 5028511
142 8018150608 8018150411 Bacteria 5549903
143 Ga0501075_0030671
144 Ga0055526_1008573
145 Ga0055528_1000597
146 Ga0065707_10007099
147 Ga0070670_100007123
148 Ga0070670_100087225
149 Ga0070689_100011957
150 Ga0070669_100012979
151 Ga0070671_100032107
152 Ga0070673_100080899
153 Ga0070688_100050933
154 Ga0070713_100117635
155 Ga0068867_100006053
156 Ga0070684_100017391
157 Ga0070695_100035388
158 Ga0068859_100234164
159 Ga0068866_10058646
160 Ga0068861_100137426
161 Ga0068862_100054861
162 Ga0081540_1003150
163 Ga0075365_10007765
164 Ga0075364_10003529
165 Ga0075364_10021332
166 Ga0075364_10098026
167 Ga0075367_10036561
168 Ga0075366_10030449
169 Ga0075370_10011415
170 Ga0075428_100063986
171 Ga0075428_100124781
172 Ga0075428_100129141
173 Ga0075430_100032117
174 Ga0075431_100000587
175 Ga0075431_100057974
176 Ga0075429_100076349
177 Ga0097620_100234148
178 Ga0099824_1018197
179 Ga0099822_1025544
180 Ga0075435_100005956
181 Ga0105240_10011088
182 Ga0114129_10031289
183 Ga0114129_10044784
184 Ga0114129_10048977
185 Ga0114129_10090955
186 Ga0105243_10065169
187 Ga0105248_10016113
188 Ga0105237_10000529
189 Ga0105238_10024808
190 Ga0105249_10057624
191 Ga0105239_10000802
192 Ga0105239_10016452
193 Ga0105239_10148181
194 Ga0157372_10115369
195 Ga0157380_10015773
196 Ga0157380_10021601
197 Ga0209673_1000255
198 Ga0209564_1000215
199 Ga0209256_1000155
200 Ga0207695_10058026
201 Ga0207671_10016474
202 Ga0207660_10051485
203 Ga0207662_10013233
204 Ga0207650_10077218
205 Ga0207700_10097800
206 Ga0207706_10080089
207 Ga0207691_10024040
208 Ga0207651_10008146
209 Ga0207639_10041803
210 Ga0207708_10002023
211 Ga0207648_10008403
212 Ga0207675_100051102
213 Ga0207683_10100964
214 Ga0209589_1000042
215 Ga0209489_100095
216 Ga0209700_100095
217 Ga0209588_1007850
218 Ga0265328_10032941
219 Ga0265325_10052898
220 Ga0265339_10006996
221 Ga0265327_10016548
222 Ga0265316_10057174
223 Ga0307408_100037712
224 Ga0307408_100168038
225 Ga0307508_10075445
226 Ga0307410_10094828
227 Ga0307412_10011847
228 Ga0307416_100058093
229 Ga0307415_100009475
230 Ga0307510_10032764
231 Ga0373937_0002908
232 Ga0395900_0136628
233 Ga0436360_0076178
234 Ga0439449_0004855
235 Ga0439434_0014508
236 Ga0501034_0075055
237 Ga0501036_0008260
238 Ga0501036_0036704
239 Ga0501040_0049920
240 Ga0501041_0010718
241 Ga0501041_0066124
242 Ga0501042_0033283
243 Ga0501046_0086476
244 Ga0501047_0083111
245 Ga0501072_0037549
246 Ga0501074_0087459
247 Ga0501075_0011771
248 Ga0501076_0052910
249 Ga0501076_0235398
250 Ga0501077_0023495
251 Ga0501081_0004670
252 Ga0501035_0091890
253 Ga0501045_0005118
254 Ga0501045_0038450
255 Ga0501045_0084811
256 Ga0501045_0125746
257 nmdc:mga00v17_45237_c1
258 nmdc:mga0yw44_11460_c1
259 nmdc:mga0k408_14486_c1
260 nmdc:mga06z11_62934_c1
261 nmdc:mga05p37_106020_c1
262 nmdc:mga05p37_26100_c1
263 nmdc:mga05p37_37791_c1
264 nmdc:mga0qj67_31088_c1
265 nmdc:mga06r32_43569_c1
266 nmdc:mga06r32_5835_c1
267 nmdc:mga08y16_193298_c1
268 nmdc:mga08y16_204112_c1
269 nmdc:mga08y16_279029_c1
270 nmdc:mga0rr50_143104_c1
271 nmdc:mga0rr50_51077_c1
272 Ga0501084_0015464
273 Ga0501084_0078988
274 Ga0590071_000642
275 Ga0590074_000538
276 Ga0590077_003534
277 Ga0501082_0122973
278 Ga0530510_0109935
279 2509151674
280 2687580440
281 2909043335
282 2932404337
283 2939671884
284 8018150608

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

19

168

0.98

PF00005

ABC_tran

ABC transporter

268

422

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
6b89-assembly1.cif.gz_A e. coli lptb in complex with adp and novobiocin 0.8981 9 232
6z67-assembly3.cif.gz_E ftse structure of streptococcus pneumoniae in complex with amppnp at 2.4 a resolution 0.8965 6 231
6mit-assembly2.cif.gz_E lptbfgc from enterobacter cloacae 0.8901 9 242
5xu1-assembly1.cif.gz_A structure of a non-canonical abc transporter from streptococcus pneumoniae r6 0.8888 6 228
2ihy-assembly1.cif.gz_A structure of the staphylococcus aureus putative atpase subunit of an atp-binding cassette (abc) transporter 0.8843 6 246
ID Description Score Start End Superfamily
af_P37388_2_240_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9726 6 244 3.40.50.300
af_P37388_2_240_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9686 6 244 3.40.50.300
af_P04983_256_497_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.965 262 497 3.40.50.300
af_P04983_1_243_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9624 6 247 3.40.50.300
af_Q6BEX0_1_254_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.962 1 244 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A353MLQ5-F1-model_v4 deleted 0.9851 376 499
AF-A0A353RC70-F1-model_v4 Ribose/galactose/methyl galactoside import ATP-binding protein (EC 7.5.2.11) 0.9791 5 244 GO:0005524
GO:0005886
GO:0016887
GO:0043211
AF-A0A1W2CIV3-F1-model_v4 Monosaccharide ABC transporter ATP-binding protein, CUT2 family 0.9774 1 244 GO:0005524
GO:0016887
AF-A0A435UPJ4-F1-model_v4 Sugar ABC transporter ATP-binding protein 0.9764 331 497 GO:0005524
GO:0016887
AF-A0A2U2S9Q4-F1-model_v4 ABC transporter ATP-binding protein 0.9731 6 244 GO:0005524
GO:0016887

Map