F186913

General Info

Members Datasets Scaffolds Average Seq Length
142 94 284 494

Family's Representative Sequence

Representative Sequence 3300049569|Ga0501032_0115402|Ga0501032_0115402_37_1650
Length 537
Sequence MNGESRVTIHKGAAAIVGLALVLVGAGASYLFMRSSAEMPERMDASVVSTSAAPASGAQPSSATTAPKNAPLSDVIVPLSAEAVDRAGIVVAPVANGTSAGGIRLPGVVEPNAYREVAVTPLVAGRVTRVSAELGASVRRGQTLAQIYSPELAEAQTKYVSAKAMLEAHDRELQRTQKLVEIGAASRQEMERIHAEHAAQTAAVESARSQLELLGVSASGIEALGSGSKVNATTSVPAPIEGVITKRAANVGLNVDQASPLFTVVDLSTVWIVADVYEKDFSQVRIGNDATVTTSAYPGLSLRGRISYIDPQVNPETRTAKVRVEVPNPRGELRLGMYADVVVTGAPGASVPVVPRSAVQNVGNRTVVYLANPKEPGTFTEREVRLGDTSGEQVEVTAGLQPGDVVVTDGSFFVRAERERLGLRPAPAATAATGISSAIPPASSGSDTDNVQSAKIVVSEQGFEPAKVVLRAGTPARLTFVRTTDKTCGTEVVFPSLNIKRALPLNEPVIIEFAPAKAEEIAFACGMNMLRGAVVVQ

Samples

Sample ID Description Type Environment
1 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
12 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
13 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
16 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
21 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
26 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
28 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
29 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
43 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
46 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
47 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
48 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
49 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
50 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
51 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
52 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
53 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
54 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
55 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
56 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
57 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
58 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
59 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
60 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
61 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
62 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
63 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
64 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
65 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
66 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
68 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
69 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
73 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
74 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
75 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
76 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
77 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
78 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
79 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
80 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
81 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
82 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
83 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
84 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
85 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
86 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
87 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
88 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
89 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
90 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
91 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
92 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
93 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
94 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.41
Nodule 0
Rhizoplane 9.15
Rhizosphere 89.44
Stem 0
Stem Tuber 0
Unclassified 26.06

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501032_0115402 3300049569 Unclassified 1776
2 Ga0065712_10075683 3300005290 Unclassified 3801
3 Ga0065712_10095283 3300005290 Unclassified 2224
4 Ga0065712_10105396 3300005290 Bacteria 1940
5 Ga0070683_100230465 3300005329 Unclassified 1761
6 Ga0070670_100038561 3300005331 Unclassified 4109
7 Ga0070670_100088360 3300005331 Unclassified 2664
8 Ga0068868_100068972 3300005338 Bacteria 2817
9 Ga0070689_100095846 3300005340 Unclassified 2344
10 Ga0070673_100121270 3300005364 Bacteria 2181
11 Ga0070659_100035877 3300005366 Bacteria 3863
12 Ga0070667_100075721 3300005367 Unclassified 2873
13 Ga0070708_100115681 3300005445 Bacteria 2469
14 Ga0070663_100031630 3300005455 Unclassified 3639
15 Ga0070678_100016417 3300005456 Bacteria 4737
16 Ga0070685_10083121 3300005466 Unclassified 1923
17 Ga0070684_100014034 3300005535 Bacteria 6478
18 Ga0070672_100051357 3300005543 Bacteria 3215
19 Ga0070672_100185662 3300005543 Bacteria 1734
20 Ga0070693_100013459 3300005547 Bacteria 4167
21 Ga0070664_100000949 3300005564 Bacteria 22660
22 Ga0070664_100131606 3300005564 Unclassified 2198
23 Ga0068857_100040183 3300005577 Unclassified 4148
24 Ga0068860_100169905 3300005843 Unclassified 2106
25 Ga0075367_10016756 3300006178 Bacteria 4007
26 Ga0097621_100123866 3300006237 Unclassified 2194
27 Ga0075428_100000015 3300006844 Bacteria 164556
28 Ga0075428_100000864 3300006844 Bacteria 31871
29 Ga0075428_100014559 3300006844 Bacteria 8736
30 Ga0075428_100038647 3300006844 Bacteria 5252
31 Ga0075430_100005324 3300006846 Bacteria 10858
32 Ga0075430_100024199 3300006846 Bacteria 5170
33 Ga0075431_100067816 3300006847 Unclassified 3683
34 Ga0075429_100020033 3300006880 Bacteria 5799
35 Ga0075429_100062348 3300006880 Bacteria 3248
36 Ga0111539_10008615 3300009094 Bacteria 12956
37 Ga0111539_10109759 3300009094 Unclassified 3237
38 Ga0111539_10359047 3300009094 Bacteria 1696
39 Ga0114129_10002782 3300009147 Bacteria 24386
40 Ga0114129_10141311 3300009147 Bacteria 3300
41 Ga0114129_10398664 3300009147 Bacteria 1814
42 Ga0105248_10112340 3300009177 Unclassified 3073
43 Ga0105248_10245520 3300009177 Unclassified 2015
44 Ga0207697_10000902 3300025315 Bacteria 16783
45 Ga0207697_10015807 3300025315 Unclassified 3114
46 Ga0207697_10047351 3300025315 Unclassified 1773
47 Ga0207682_10011664 3300025893 Bacteria 3435
48 Ga0207688_10007033 3300025901 Bacteria 6119
49 Ga0207645_10037197 3300025907 Bacteria 3124
50 Ga0207650_10022269 3300025925 Bacteria 4484
51 Ga0207659_10013479 3300025926 Bacteria 5238
52 Ga0207659_10076619 3300025926 Bacteria 2459
53 Ga0207706_10137524 3300025933 Bacteria 2149
54 Ga0207691_10063525 3300025940 Bacteria 3348
55 Ga0207679_10031174 3300025945 Bacteria 3730
56 Ga0207679_10082515 3300025945 Unclassified 2461
57 Ga0207651_10016193 3300025960 Bacteria 4359
58 Ga0207678_10082356 3300026067 Unclassified 2753
59 Ga0207674_10023364 3300026116 Bacteria 6625
60 Ga0207683_10056799 3300026121 Bacteria 3435
61 Ga0207428_10000004 3300027907 Bacteria 727800
62 Ga0207428_10011666 3300027907 Bacteria 7751
63 Ga0268266_10087503 3300028379 Bacteria 2726
64 Ga0268264_10167112 3300028381 Unclassified 1987
65 Ga0307408_100007699 3300031548 Bacteria 7127
66 Ga0307408_100029102 3300031548 Bacteria 3824
67 Ga0307406_10086354 3300031901 Unclassified 2100
68 Ga0307409_100129859 3300031995 Bacteria 2151
69 Ga0307409_100210081 3300031995 Bacteria 1748
70 Ga0307409_100220479 3300031995 Bacteria 1712
71 Ga0307416_100042358 3300032002 Unclassified 3554
72 Ga0307416_100045767 3300032002 Bacteria 3448
73 Ga0307411_10012004 3300032005 Bacteria 4705
74 Ga0373925_0005018 3300037068 Bacteria 9932
75 Ga0439435_0003253 3300042436 Unclassified 3357
76 Ga0439464_0004949 3300042439 Bacteria 3423
77 Ga0495603_0058463 3300046455 Unclassified 2280
78 Ga0495629_0062049 3300046459 Unclassified 2612
79 Ga0496101_0183952 3300048904 Bacteria 1610
80 Ga0496102_0055471 3300048905 Bacteria 3613
81 Ga0496104_0004250 3300048907 Bacteria 12436
82 Ga0496105_0008716 3300048908 Bacteria 7892
83 Ga0496108_0015298 3300048911 Bacteria 6260
84 Ga0496108_0173156 3300048911 Unclassified 1868
85 Ga0496109_0002765 3300048912 Bacteria 14695
86 Ga0496110_0008289 3300048913 Bacteria 8357
87 Ga0496110_0036815 3300048913 Bacteria 4251
88 Ga0496110_0238342 3300048913 Bacteria 1655
89 Ga0496111_0002482 3300048914 Bacteria 11127
90 Ga0496112_0001707 3300048915 Bacteria 17153
91 Ga0496113_0025797 3300048916 Unclassified 4195
92 Ga0501034_0002315 3300049571 Bacteria 23266
93 Ga0501034_0020589 3300049571 Bacteria 6737
94 Ga0501036_0118459 3300049572 Bacteria 2236
95 Ga0501039_0032218 3300049575 Bacteria 4040
96 Ga0501043_0036678 3300049579 Bacteria 3858
97 Ga0501046_0068581 3300049580 Bacteria 2760
98 Ga0501046_0069390 3300049580 Bacteria 2742
99 Ga0501047_0002241 3300049581 Bacteria 18504
100 Ga0501048_0037312 3300049582 Bacteria 3490
101 Ga0501068_0097991 3300049584 Bacteria 1815
102 Ga0501070_0185850 3300049586 Unclassified 1709
103 Ga0501070_0247027 3300049586 Bacteria 1460
104 Ga0501071_0030602 3300049587 Bacteria 3808
105 Ga0501072_0017023 3300049588 Bacteria 5584
106 Ga0501072_0040998 3300049588 Bacteria 3636
107 Ga0501073_0110705 3300049589 Unclassified 1905
108 Ga0501075_0041439 3300049591 Bacteria 3451
109 Ga0501075_0071221 3300049591 Unclassified 2627
110 Ga0501217_019987 3300049661 Bacteria 1568
111 Ga0501235_016739 3300049669 Bacteria 1621
112 Ga0501249_021448 3300049679 Bacteria 1409
113 Ga0501080_0020803 3300049742 Bacteria 6074
114 Ga0501045_0084278 3300049824 Bacteria 2345
115 Ga0501045_0163084 3300049824 Unclassified 1659
116 nmdc:mga06z11_24756_c1 3300050494 Bacteria 2836
117 nmdc:mga05p37_131977_c1 3300050507 Bacteria 3065
118 nmdc:mga05p37_3376_c1 3300050507 Bacteria 18634
119 nmdc:mga09592_143300_c1 3300050508 Bacteria 2060
120 nmdc:mga09592_29623_c1 3300050508 Unclassified 4552
121 nmdc:mga0qj67_219215_c1 3300050509 Unclassified 1544
122 nmdc:mga0qj67_26468_c1 3300050509 Bacteria 4490
123 nmdc:mga0qj67_63277_c1 3300050509 Bacteria 2942
124 nmdc:mga06r32_10678_c1 3300050510 Bacteria 8279
125 nmdc:mga06r32_13523_c1 3300050510 Bacteria 7397
126 nmdc:mga06r32_143572_c1 3300050510 Bacteria 2364
127 nmdc:mga06r32_65269_c1 3300050510 Bacteria 3511
128 nmdc:mga08y16_22102_c1 3300050511 Bacteria 6715
129 nmdc:mga08y16_2_c1 3300050511 Bacteria 983367
130 nmdc:mga08y16_512_c1 3300050511 Bacteria 35786
131 nmdc:mga0a205_36813_c2 3300050515 Bacteria 3445
132 Ga0590071_000055 3300059421 Bacteria 30397
133 Ga0590071_000074 3300059421 Bacteria 27178
134 Ga0590071_004630 3300059421 Bacteria 3329
135 Ga0590071_016076 3300059421 Bacteria 1755
136 Ga0590074_000288 3300059423 Bacteria 6834
137 Ga0590075_000052 3300059424 Bacteria 29983
138 Ga0590075_000073 3300059424 Bacteria 25470
139 Ga0590075_003368 3300059424 Unclassified 3806
140 Ga0590077_000019 3300059426 Bacteria 36794
141 Ga0590077_001161 3300059426 Bacteria 6405
142 Ga0501082_0034100 3300060353 Bacteria 4391
143 Ga0501032_0115402
144 Ga0065712_10075683
145 Ga0065712_10095283
146 Ga0065712_10105396
147 Ga0070683_100230465
148 Ga0070670_100038561
149 Ga0070670_100088360
150 Ga0068868_100068972
151 Ga0070689_100095846
152 Ga0070673_100121270
153 Ga0070659_100035877
154 Ga0070667_100075721
155 Ga0070708_100115681
156 Ga0070663_100031630
157 Ga0070678_100016417
158 Ga0070685_10083121
159 Ga0070684_100014034
160 Ga0070672_100051357
161 Ga0070672_100185662
162 Ga0070693_100013459
163 Ga0070664_100000949
164 Ga0070664_100131606
165 Ga0068857_100040183
166 Ga0068860_100169905
167 Ga0075367_10016756
168 Ga0097621_100123866
169 Ga0075428_100000015
170 Ga0075428_100000864
171 Ga0075428_100014559
172 Ga0075428_100038647
173 Ga0075430_100005324
174 Ga0075430_100024199
175 Ga0075431_100067816
176 Ga0075429_100020033
177 Ga0075429_100062348
178 Ga0111539_10008615
179 Ga0111539_10109759
180 Ga0111539_10359047
181 Ga0114129_10002782
182 Ga0114129_10141311
183 Ga0114129_10398664
184 Ga0105248_10112340
185 Ga0105248_10245520
186 Ga0207697_10000902
187 Ga0207697_10015807
188 Ga0207697_10047351
189 Ga0207682_10011664
190 Ga0207688_10007033
191 Ga0207645_10037197
192 Ga0207650_10022269
193 Ga0207659_10013479
194 Ga0207659_10076619
195 Ga0207706_10137524
196 Ga0207691_10063525
197 Ga0207679_10031174
198 Ga0207679_10082515
199 Ga0207651_10016193
200 Ga0207678_10082356
201 Ga0207674_10023364
202 Ga0207683_10056799
203 Ga0207428_10000004
204 Ga0207428_10011666
205 Ga0268266_10087503
206 Ga0268264_10167112
207 Ga0307408_100007699
208 Ga0307408_100029102
209 Ga0307406_10086354
210 Ga0307409_100129859
211 Ga0307409_100210081
212 Ga0307409_100220479
213 Ga0307416_100042358
214 Ga0307416_100045767
215 Ga0307411_10012004
216 Ga0373925_0005018
217 Ga0439435_0003253
218 Ga0439464_0004949
219 Ga0495603_0058463
220 Ga0495629_0062049
221 Ga0496101_0183952
222 Ga0496102_0055471
223 Ga0496104_0004250
224 Ga0496105_0008716
225 Ga0496108_0015298
226 Ga0496108_0173156
227 Ga0496109_0002765
228 Ga0496110_0008289
229 Ga0496110_0036815
230 Ga0496110_0238342
231 Ga0496111_0002482
232 Ga0496112_0001707
233 Ga0496113_0025797
234 Ga0501034_0002315
235 Ga0501034_0020589
236 Ga0501036_0118459
237 Ga0501039_0032218
238 Ga0501043_0036678
239 Ga0501046_0068581
240 Ga0501046_0069390
241 Ga0501047_0002241
242 Ga0501048_0037312
243 Ga0501068_0097991
244 Ga0501070_0185850
245 Ga0501070_0247027
246 Ga0501071_0030602
247 Ga0501072_0017023
248 Ga0501072_0040998
249 Ga0501073_0110705
250 Ga0501075_0041439
251 Ga0501075_0071221
252 Ga0501217_019987
253 Ga0501235_016739
254 Ga0501249_021448
255 Ga0501080_0020803
256 Ga0501045_0084278
257 Ga0501045_0163084
258 nmdc:mga06z11_24756_c1
259 nmdc:mga05p37_131977_c1
260 nmdc:mga05p37_3376_c1
261 nmdc:mga09592_143300_c1
262 nmdc:mga09592_29623_c1
263 nmdc:mga0qj67_219215_c1
264 nmdc:mga0qj67_26468_c1
265 nmdc:mga0qj67_63277_c1
266 nmdc:mga06r32_10678_c1
267 nmdc:mga06r32_13523_c1
268 nmdc:mga06r32_143572_c1
269 nmdc:mga06r32_65269_c1
270 nmdc:mga08y16_22102_c1
271 nmdc:mga08y16_2_c1
272 nmdc:mga08y16_512_c1
273 nmdc:mga0a205_36813_c2
274 Ga0590071_000055
275 Ga0590071_000074
276 Ga0590071_004630
277 Ga0590071_016076
278 Ga0590074_000288
279 Ga0590075_000052
280 Ga0590075_000073
281 Ga0590075_003368
282 Ga0590077_000019
283 Ga0590077_001161
284 Ga0501082_0034100

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13437

HlyD_3

HlyD family secretion protein

235

336

0.94

PF16576

HlyD_D23

Barrel-sandwich domain of CusB or HlyD membrane-fusion

99

339

0.92

PF13473

Cupredoxin_1

Cupredoxin-like domain

429

536

0.91

PF13533

Biotin_lipoyl_2

Biotin-lipoyl like

111

164

0.9

PF00529

CusB_dom_1

Cation efflux system protein CusB domain 1

14

408

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4pjw-assembly1.cif.gz_A crystal structure of human stromal antigen 2 (sa2) in complex with sister chromatid cohesion protein 1 (scc1), with bound mes 0.9409 130 192
2d5d-assembly1.cif.gz_A structure of biotin carboxyl carrier protein (74val start) from pyrococcus horikoshi ot3 ligand free form ii 0.9401 96 242
7zjs-assembly2.cif.gz_C structural basis of centromeric cohesion protection by sgo1 0.94 130 192
5gua-assembly1.cif.gz_A structure of biotin carboxyl carrier protein from pyrococcus horikoshi ot3 (delta n79) a138y mutant 0.9366 94 242
5ks8-assembly1.cif.gz_F crystal structure of two-subunit pyruvate carboxylase from methylobacillus flagellatus 0.9366 96 242
ID Description Score Start End Superfamily
af_Q6AHQ8_8_294_1.20.1270.60 Mainly Alpha;Up-down Bundle;Substrate Binding Domain Of Dnak; Chain:A; Domain 2;Arfaptin homology (AH) domain/BAR domain 0.9713 130 190 1.20.1270.60
af_Q75JC8_2_111_1.20.58.90 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.9601 129 192 1.20.58.90
1vf7M03 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Helix hairpin bin 0.9568 132 189 1.10.287.470
3n6rA04 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9564 95 240 2.40.50.100
af_Q91ZA3_659_724_2.40.50.100 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9511 101 242 2.40.50.100
ID Description Score Start End GO Terms
AF-A0A7Y2AK62-F1-model_v4 HlyD family secretion protein 0.8146 216 327 GO:0030313
AF-A0A4V1TQG3-F1-model_v4 Biotin/lipoyl-binding protein 0.8004 55 243 GO:0015679
GO:0030288
GO:0046914
GO:0060003
AF-A0A7C6AXP6-F1-model_v4 HlyD family efflux transporter periplasmic adaptor subunit 0.7725 49 336 GO:0015679
GO:0030288
GO:0046914
GO:0060003
AF-A0A3M1CAV3-F1-model_v4 Efflux RND transporter periplasmic adaptor subunit 0.7678 46 402 GO:0015679
GO:0016020
GO:0022857
GO:0030313
GO:0060003
AF-A0A2V8LII7-F1-model_v4 Restriction endonuclease subunit R 0.7583 407 497 GO:0003677
GO:0004519
GO:0005524
GO:0005829
GO:0006304
GO:0016209
GO:0016491

Map