F186908

General Info

Members Datasets Scaffolds Average Seq Length
142 79 140 385

Family's Representative Sequence

Representative Sequence 3300049569|Ga0501032_0056501|Ga0501032_0056501_339_1730
Length 463
Sequence MNELEQLTQLCRRLGAEPGPAAAMAAQLQKRAGQLSNERGITREVAMQYLLEVLVKGRHGEISADSLPDRPAPSMREKLVALFHAHYGRAPEVIARAPGRIEFIGNHTDYNGGTVLGAAINRGIWVALARRTDGRRRFFSEQAREVTELSASQPLAKLEGERSWLNYPLGILAVLPEFGLPVPGGFDYAAVSDLPVGAGLSSSAAIELASALAFLEVVGRQPAREVIVNVGKKAENNFVGVPCGILDQGVSGFGQENHLVFIDCLGPRFAPVPLPTGAHFWIFNTHTRHALVDGLYAARHRECMEAAKALGVPLLREASAAMLGAAGSRLSPIVRRRAQHVIEEISRVDATMAALKQGDLREVGRLLTASHRSSQSLFENSTPELDLLVDVLTKIPAVYGARLTGGGFGGAVMALTNEAFGEKQAADVIAAYAEKFGNQPDVLHALTGNGAQIISSATGATPE

Samples

Sample ID Description Type Environment
1 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
2 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
10 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
11 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
12 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
13 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
14 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
15 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
16 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
17 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
18 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
19 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
20 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
22 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
24 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
27 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
28 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
29 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
30 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
31 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
32 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
33 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
34 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
35 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
36 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
37 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
38 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
39 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
40 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
41 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
42 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
43 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
44 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
45 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
46 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
47 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
48 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
49 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
50 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
51 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
52 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
53 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
54 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
55 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
56 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
57 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
58 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
59 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
60 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
61 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
62 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
63 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
64 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
65 3300049528 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
66 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
67 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
68 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
69 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
70 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
71 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
72 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
73 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
74 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
75 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
76 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
79 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.89
Metatranscriptomes 0.7
Isolates 1.41

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 95.77
Stem 0
Stem Tuber 0
Unclassified 4.23

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10009958 3300003320 Bacteria 8933
2 rootL2_10000235 3300003322 Bacteria 4424
3 rootL2_10135910 3300003322 Unclassified 2115
4 Ga0070683_100024328 3300005329 Bacteria 5424
5 Ga0068869_100001753 3300005334 Bacteria 12968
6 Ga0068868_100027551 3300005338 Bacteria 4336
7 Ga0068868_100034643 3300005338 Bacteria 3899
8 Ga0070713_100001146 3300005436 Bacteria 16990
9 Ga0068867_100000101 3300005459 Bacteria 54858
10 Ga0070665_100302944 3300005548 Bacteria 1601
11 Ga0068856_100006002 3300005614 Bacteria 11952
12 Ga0068866_10049714 3300005718 Bacteria 2126
13 Ga0068863_100036103 3300005841 Bacteria 4707
14 Ga0070717_10000324 3300006028 Bacteria 31087
15 Ga0097621_100031117 3300006237 Bacteria 4232
16 Ga0068865_100052850 3300006881 Bacteria 2817
17 Ga0105249_10093773 3300009553 Bacteria 2813
18 Ga0157378_10045712 3300013297 Bacteria 3891
19 Ga0207700_10026103 3300025928 Bacteria 4069
20 Ga0207704_10090883 3300025938 Bacteria 2005
21 Ga0207689_10000102 3300025942 Bacteria 69286
22 Ga0207661_10205869 3300025944 Bacteria 1732
23 Ga0207677_10038498 3300026023 Bacteria 3136
24 Ga0207702_10001459 3300026078 Bacteria 23510
25 Ga0207641_10015261 3300026088 Bacteria 6295
26 Ga0207648_10003874 3300026089 Bacteria 15618
27 Ga0265337_1000820 3300028556 Bacteria 16332
28 Ga0265337_1025111 3300028556 Bacteria 1816
29 Ga0265319_1000148 3300028563 Bacteria 52147
30 Ga0265319_1000224 3300028563 Bacteria 42328
31 Ga0265319_1001469 3300028563 Bacteria 14112
32 Ga0265319_1002684 3300028563 Bacteria 9537
33 Ga0265319_1003784 3300028563 Bacteria 7759
34 Ga0265334_10000480 3300028573 Bacteria 20620
35 Ga0265334_10004775 3300028573 Bacteria 5957
36 Ga0265318_10000372 3300028577 Bacteria 35288
37 Ga0265318_10001937 3300028577 Bacteria 11547
38 Ga0265318_10002036 3300028577 Bacteria 11162
39 Ga0265318_10004921 3300028577 Bacteria 6371
40 Ga0265323_10000075 3300028653 Bacteria 55923
41 Ga0265323_10001346 3300028653 Bacteria 12161
42 Ga0265323_10003149 3300028653 Bacteria 7350
43 Ga0265323_10017317 3300028653 Bacteria 2799
44 Ga0265323_10029891 3300028653 Bacteria 2034
45 Ga0265323_10055739 3300028653 Bacteria 1388
46 Ga0265322_10000201 3300028654 Bacteria 26392
47 Ga0265322_10002816 3300028654 Bacteria 5313
48 Ga0265336_10001877 3300028666 Bacteria 9094
49 Ga0307515_10057904 3300028794 Bacteria 5596
50 Ga0265338_10000678 3300028800 Bacteria 58665
51 Ga0265338_10002917 3300028800 Bacteria 24827
52 Ga0265324_10003813 3300029957 Bacteria 7043
53 Ga0265324_10006112 3300029957 Bacteria 5084
54 Ga0265330_10035419 3300031235 Bacteria 2227
55 Ga0265332_10038747 3300031238 Bacteria 2065
56 Ga0265332_10082046 3300031238 Bacteria 1367
57 Ga0265328_10035722 3300031239 Bacteria 1837
58 Ga0265320_10000148 3300031240 Bacteria 59382
59 Ga0265320_10000199 3300031240 Bacteria 49328
60 Ga0265320_10004444 3300031240 Bacteria 9187
61 Ga0265320_10009762 3300031240 Bacteria 5759
62 Ga0265320_10012244 3300031240 Bacteria 5003
63 Ga0265320_10019637 3300031240 Bacteria 3688
64 Ga0265320_10064886 3300031240 Bacteria 1733
65 Ga0265320_10068585 3300031240 Bacteria 1675
66 Ga0265340_10005688 3300031247 Bacteria 6888
67 Ga0265339_10030663 3300031249 Bacteria 3044
68 Ga0265331_10005607 3300031250 Bacteria 7551
69 Ga0265327_10002621 3300031251 Bacteria 18586
70 Ga0265327_10007624 3300031251 Bacteria 8297
71 Ga0265316_10000890 3300031344 Bacteria 32752
72 Ga0265316_10014445 3300031344 Bacteria 6948
73 Ga0265316_10020607 3300031344 Bacteria 5607
74 Ga0265316_10035317 3300031344 Bacteria 4051
75 Ga0265316_10045336 3300031344 Bacteria 3491
76 Ga0265316_10058360 3300031344 Unclassified 3006
77 Ga0265316_10062977 3300031344 Bacteria 2877
78 Ga0265316_10142368 3300031344 Bacteria 1800
79 Ga0307408_100000093 3300031548 Bacteria 98443
80 Ga0265313_10000400 3300031595 Bacteria 46663
81 Ga0265313_10002352 3300031595 Bacteria 16502
82 Ga0265313_10002668 3300031595 Bacteria 15154
83 Ga0265313_10010182 3300031595 Bacteria 5997
84 Ga0265313_10064700 3300031595 Bacteria 1700
85 Ga0307508_10000057 3300031616 Bacteria 125883
86 Ga0265314_10000432 3300031711 Bacteria 56071
87 Ga0265314_10008114 3300031711 Bacteria 9036
88 Ga0265342_10001630 3300031712 Bacteria 20698
89 Ga0265342_10004608 3300031712 Bacteria 10757
90 Ga0265342_10012446 3300031712 Bacteria 5761
91 Ga0265342_10043912 3300031712 Bacteria 2696
92 Ga0265342_10061221 3300031712 Bacteria 2218
93 Ga0265342_10066817 3300031712 Bacteria 2105
94 Ga0307410_10000019 3300031852 Bacteria 68863
95 Ga0307412_10088502 3300031911 Unclassified 2160
96 Ga0307409_100002132 3300031995 Bacteria 10192
97 Ga0307416_100000109 3300032002 Bacteria 50784
98 Ga0373935_0014375 3300035692 Bacteria 4778
99 Ga0395905_0000030 3300037471 Bacteria 289430
100 Ga0451577_0000076 3300042876 Bacteria 225346
101 Ga0451577_0213491 3300042876 Bacteria 1743
102 Ga0453683_0001163 3300044673 Bacteria 23781
103 Ga0453683_0217510 3300044673 Bacteria 1214
104 Ga0466966_0030720 3300044684 Bacteria 3485
105 Ga0466966_0045485 3300044684 Bacteria 2806
106 Ga0466961_0166019 3300044693 Bacteria 1374
107 Ga0453684_0000185 3300044712 Bacteria 274418
108 Ga0453684_0045732 3300044712 Bacteria 5833
109 Ga0453684_0093668 3300044712 Bacteria 3699
110 Ga0453684_0509536 3300044712 Bacteria 1331
111 Ga0466959_0054761 3300045049 Bacteria 2913
112 Ga0451576_0002003 3300045051 Bacteria 32276
113 Ga0451576_0136668 3300045051 Bacteria 2556
114 Ga0466967_0071724 3300045976 Bacteria 3102
115 Ga0501312_006868 3300049528 Bacteria 1436
116 Ga0501032_0000561 3300049569 Bacteria 30113
117 Ga0501032_0056501 3300049569 Bacteria 2638
118 Ga0501033_0001676 3300049570 Bacteria 19372
119 Ga0501033_0003967 3300049570 Bacteria 11996
120 Ga0501038_0115002 3300049574 Bacteria 2224
121 Ga0501042_0044815 3300049578 Bacteria 3151
122 Ga0501043_0013574 3300049579 Bacteria 6374
123 Ga0501046_0006826 3300049580 Bacteria 10069
124 Ga0501046_0009318 3300049580 Bacteria 8496
125 Ga0501046_0058809 3300049580 Bacteria 3012
126 Ga0501047_0011820 3300049581 Bacteria 8257
127 Ga0501047_0014687 3300049581 Bacteria 7452
128 Ga0501068_0047836 3300049584 Bacteria 2581
129 Ga0501243_000438 3300049675 Bacteria 5527
130 Ga0501083_0002493 3300049744 Bacteria 12626
131 Ga0501083_0045670 3300049744 Bacteria 2963
132 Ga0501035_0001011 3300049822 Bacteria 29695
133 Ga0501035_0008179 3300049822 Bacteria 9747
134 Ga0501035_0019955 3300049822 Bacteria 6157
135 Ga0501044_0007333 3300049823 Bacteria 12118
136 Ga0501044_0007719 3300049823 Bacteria 11829
137 Ga0501044_0140337 3300049823 Bacteria 2405
138 Ga0501044_0222766 3300049823 Bacteria 1836
139 Ga0501045_0136948 3300049824 Bacteria 1820
140 Ga0501082_0193870 3300060353 Bacteria 1767

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005841 Ga0068863_100036103 Ga0068863_1000361031 361
2 3300026088 Ga0207641_10015261 Ga0207641_100152617 361
3 3300028577 Ga0265318_10002036 Ga0265318_100020368 361
4 3300028666 Ga0265336_10001877 Ga0265336_100018778 361
5 3300028800 Ga0265338_10002917 Ga0265338_1000291717 361
6 3300029957 Ga0265324_10003813 Ga0265324_100038132 361
7 3300031239 Ga0265328_10035722 Ga0265328_100357222 361
8 3300031251 Ga0265327_10002621 Ga0265327_100026216 361
9 3300031344 Ga0265316_10014445 Ga0265316_100144455 361
10 3300031712 Ga0265342_10043912 Ga0265342_100439123 361
11 3300044712 Ga0453684_0509536 Ga0453684_0509536_10_1095 361
12 3300044684 Ga0466966_0045485 Ga0466966_0045485_987_2162 365
13 iso_pu_bacteria 2818991472 2819740999 369
14 3300009553 Ga0105249_10093773 Ga0105249_100937732 373
15 3300013297 Ga0157378_10045712 Ga0157378_100457123 373
16 3300028563 Ga0265319_1000224 Ga0265319_100022411 373
17 3300031240 Ga0265320_10012244 Ga0265320_100122442 373
18 3300031251 Ga0265327_10007624 Ga0265327_100076248 374
19 iso_pu_bacteria 2786546940 2788433426 375
20 3300028563 Ga0265319_1001469 Ga0265319_100146915 378
21 3300031240 Ga0265320_10000148 Ga0265320_100001488 378
22 3300031240 Ga0265320_10009762 Ga0265320_100097625 378
23 3300031250 Ga0265331_10005607 Ga0265331_100056072 378
24 3300031595 Ga0265313_10000400 Ga0265313_1000040030 378
25 3300005334 Ga0068869_100001753 Ga0068869_1000017536 379
26 3300005338 Ga0068868_100027551 Ga0068868_1000275512 379
27 3300005338 Ga0068868_100034643 Ga0068868_1000346434 379
28 3300005459 Ga0068867_100000101 Ga0068867_10000010125 379
29 3300005548 Ga0070665_100302944 Ga0070665_1003029442 379
30 3300005718 Ga0068866_10049714 Ga0068866_100497143 379
31 3300006237 Ga0097621_100031117 Ga0097621_1000311175 379
32 3300006881 Ga0068865_100052850 Ga0068865_1000528503 379
33 3300025938 Ga0207704_10090883 Ga0207704_100908832 379
34 3300025942 Ga0207689_10000102 Ga0207689_1000010217 379
35 3300026023 Ga0207677_10038498 Ga0207677_100384982 379
36 3300026089 Ga0207648_10003874 Ga0207648_1000387415 379
37 3300028653 Ga0265323_10003149 Ga0265323_100031499 379
38 3300031240 Ga0265320_10068585 Ga0265320_100685853 379
39 3300031344 Ga0265316_10035317 Ga0265316_100353171 379
40 3300031344 Ga0265316_10045336 Ga0265316_100453361 379
41 3300031344 Ga0265316_10058360 Ga0265316_100583602 379
42 3300031548 Ga0307408_100000093 Ga0307408_10000009364 379
43 3300031712 Ga0265342_10066817 Ga0265342_100668172 379
44 3300031852 Ga0307410_10000019 Ga0307410_1000001946 379
45 3300031911 Ga0307412_10088502 Ga0307412_100885023 379
46 3300031995 Ga0307409_100002132 Ga0307409_1000021324 379
47 3300032002 Ga0307416_100000109 Ga0307416_10000010920 379
48 3300037471 Ga0395905_0000030 Ga0395905_0000030_38512_39651 379
49 3300042876 Ga0451577_0000076 Ga0451577_0000076_19247_20395 379
50 3300042876 Ga0451577_0213491 Ga0451577_0213491_152_1345 379
51 3300044712 Ga0453684_0093668 Ga0453684_0093668_176_1369 379
52 3300045051 Ga0451576_0002003 Ga0451576_0002003_5976_7115 379
53 3300049528 Ga0501312_006868 Ga0501312_006868_195_1340 379
54 3300049675 Ga0501243_000438 Ga0501243_000438_2116_3318 379
55 3300003322 rootL2_10000235 rootL2_100002354 380
56 3300005329 Ga0070683_100024328 Ga0070683_1000243285 380
57 3300006028 Ga0070717_10000324 Ga0070717_1000032426 380
58 3300025944 Ga0207661_10205869 Ga0207661_102058692 380
59 3300031240 Ga0265320_10064886 Ga0265320_100648862 380
60 3300031595 Ga0265313_10002668 Ga0265313_1000266811 380
61 3300031616 Ga0307508_10000057 Ga0307508_1000005714 380
62 3300031711 Ga0265314_10008114 Ga0265314_100081144 380
63 3300044673 Ga0453683_0001163 Ga0453683_0001163_1617_2768 380
64 3300044673 Ga0453683_0217510 Ga0453683_0217510_46_1197 380
65 3300044684 Ga0466966_0030720 Ga0466966_0030720_2317_3459 380
66 3300044693 Ga0466961_0166019 Ga0466961_0166019_86_1228 380
67 3300044712 Ga0453684_0045732 Ga0453684_0045732_221_1363 380
68 3300045049 Ga0466959_0054761 Ga0466959_0054761_1132_2274 380
69 3300045051 Ga0451576_0136668 Ga0451576_0136668_261_1412 380
70 3300049569 Ga0501032_0000561 Ga0501032_0000561_1691_2842 380
71 3300049570 Ga0501033_0003967 Ga0501033_0003967_8876_10018 380
72 3300049574 Ga0501038_0115002 Ga0501038_0115002_44_1186 380
73 3300049578 Ga0501042_0044815 Ga0501042_0044815_458_1600 380
74 3300049579 Ga0501043_0013574 Ga0501043_0013574_1636_2787 380
75 3300049580 Ga0501046_0009318 Ga0501046_0009318_5720_6862 380
76 3300049580 Ga0501046_0058809 Ga0501046_0058809_144_1295 380
77 3300049581 Ga0501047_0014687 Ga0501047_0014687_1465_2607 380
78 3300049584 Ga0501068_0047836 Ga0501068_0047836_1092_2234 380
79 3300049744 Ga0501083_0002493 Ga0501083_0002493_1742_2884 380
80 3300049744 Ga0501083_0045670 Ga0501083_0045670_1528_2670 380
81 3300049822 Ga0501035_0001011 Ga0501035_0001011_27272_28423 380
82 3300049822 Ga0501035_0008179 Ga0501035_0008179_7265_8407 380
83 3300049822 Ga0501035_0019955 Ga0501035_0019955_3130_4272 380
84 3300049823 Ga0501044_0007333 Ga0501044_0007333_2034_3185 380
85 3300049823 Ga0501044_0007719 Ga0501044_0007719_7876_9024 380
86 3300049823 Ga0501044_0222766 Ga0501044_0222766_111_1253 380
87 3300049824 Ga0501045_0136948 Ga0501045_0136948_341_1483 380
88 3300060353 Ga0501082_0193870 Ga0501082_0193870_446_1588 380
89 3300003320 rootH2_10009958 rootH2_100099589 381
90 3300003322 rootL2_10135910 rootL2_101359102 381
91 3300005436 Ga0070713_100001146 Ga0070713_10000114616 381
92 3300005614 Ga0068856_100006002 Ga0068856_1000060026 381
93 3300025928 Ga0207700_10026103 Ga0207700_100261033 381
94 3300026078 Ga0207702_10001459 Ga0207702_100014597 381
95 3300028556 Ga0265337_1000820 Ga0265337_100082011 381
96 3300028556 Ga0265337_1025111 Ga0265337_10251112 381
97 3300028563 Ga0265319_1000148 Ga0265319_100014834 381
98 3300028563 Ga0265319_1002684 Ga0265319_10026843 381
99 3300028563 Ga0265319_1003784 Ga0265319_10037842 381
100 3300028573 Ga0265334_10000480 Ga0265334_100004802 381
101 3300028573 Ga0265334_10004775 Ga0265334_100047755 381
102 3300028577 Ga0265318_10000372 Ga0265318_1000037228 381
103 3300028577 Ga0265318_10001937 Ga0265318_1000193712 381
104 3300028577 Ga0265318_10004921 Ga0265318_100049213 381
105 3300028653 Ga0265323_10000075 Ga0265323_1000007525 381
106 3300028653 Ga0265323_10001346 Ga0265323_100013463 381
107 3300028653 Ga0265323_10017317 Ga0265323_100173172 381
108 3300028653 Ga0265323_10029891 Ga0265323_100298912 381
109 3300028653 Ga0265323_10055739 Ga0265323_100557391 381
110 3300028654 Ga0265322_10000201 Ga0265322_100002013 381
111 3300028654 Ga0265322_10002816 Ga0265322_100028163 381
112 3300028794 Ga0307515_10057904 Ga0307515_100579045 381
113 3300028800 Ga0265338_10000678 Ga0265338_100006788 381
114 3300029957 Ga0265324_10006112 Ga0265324_100061125 381
115 3300031235 Ga0265330_10035419 Ga0265330_100354192 381
116 3300031238 Ga0265332_10038747 Ga0265332_100387472 381
117 3300031238 Ga0265332_10082046 Ga0265332_100820462 381
118 3300031240 Ga0265320_10000199 Ga0265320_1000019949 381
119 3300031240 Ga0265320_10004444 Ga0265320_100044445 381
120 3300031240 Ga0265320_10019637 Ga0265320_100196373 381
121 3300031247 Ga0265340_10005688 Ga0265340_100056887 381
122 3300031249 Ga0265339_10030663 Ga0265339_100306633 381
123 3300031344 Ga0265316_10000890 Ga0265316_1000089012 381
124 3300031344 Ga0265316_10020607 Ga0265316_100206074 381
125 3300031344 Ga0265316_10062977 Ga0265316_100629771 381
126 3300031344 Ga0265316_10142368 Ga0265316_101423682 381
127 3300031595 Ga0265313_10002352 Ga0265313_100023523 381
128 3300031595 Ga0265313_10010182 Ga0265313_100101823 381
129 3300031595 Ga0265313_10064700 Ga0265313_100647002 381
130 3300031711 Ga0265314_10000432 Ga0265314_1000043237 381
131 3300031712 Ga0265342_10001630 Ga0265342_1000163013 381
132 3300031712 Ga0265342_10004608 Ga0265342_100046083 381
133 3300031712 Ga0265342_10012446 Ga0265342_100124462 381
134 3300031712 Ga0265342_10061221 Ga0265342_100612213 381
135 3300035692 Ga0373935_0014375 Ga0373935_0014375_447_1592 381
136 3300044712 Ga0453684_0000185 Ga0453684_0000185_235310_236458 381
137 3300045976 Ga0466967_0071724 Ga0466967_0071724_692_1837 381
138 3300049569 Ga0501032_0056501 Ga0501032_0056501_339_1730 381
139 3300049570 Ga0501033_0001676 Ga0501033_0001676_2200_3591 381
140 3300049580 Ga0501046_0006826 Ga0501046_0006826_8350_9741 381
141 3300049581 Ga0501047_0011820 Ga0501047_0011820_4986_6377 381
142 3300049823 Ga0501044_0140337 Ga0501044_0140337_931_2322 381

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10509

GalKase_gal_bdg

Galactokinase galactose-binding signature

81

130

0.94

PF00288

GHMP_kinases_N

GHMP kinases N terminal domain

166

255

0.92

PF08544

GHMP_kinases_C

GHMP kinases C terminal

351

438

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
2dei-assembly1.cif.gz_A crystal structure of galaktokinase from pyrococcus horikoshii with amp-pnp and galactose 0.9561 18 377
2dej-assembly1.cif.gz_A crystal structure of galaktokinase from pyrococcus horikoshii with amp-pn and galactose 0.9522 18 377
2dei-assembly1.cif.gz_A crystal structure of galaktokinase from pyrococcus horikoshii with amp-pnp and galactose 0.9508 18 377
1s4e-assembly8.cif.gz_H pyrococcus furiosus galactokinase in complex with galactose, adp and magnesium 0.9507 20 375
1s4e-assembly9.cif.gz_I pyrococcus furiosus galactokinase in complex with galactose, adp and magnesium 0.9473 20 377
ID Description Score Start End Superfamily
1s4eE01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9541 18 198 3.30.230.10
1s4eE01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9488 18 198 3.30.230.10
af_P9WN63_1_186_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9474 20 199 3.30.230.10
1pieA01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9409 2 198 3.30.230.10
af_P0A6T3_2_205_3.30.230.10 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2; 0.9286 2 201 3.30.230.10
ID Description Score Start End GO Terms
AF-A0A356FUL9-F1-model_v4 Galactokinase 0.971 1 165 GO:0004335
GO:0005524
GO:0005829
GO:0006012
AF-A0A7C1IUR1-F1-model_v4 Galactokinase (EC 2.7.1.6) (Galactose kinase) 0.9704 2 381 GO:0000287
GO:0004335
GO:0005524
GO:0005829
GO:0006012
AF-A0A7X9E3E6-F1-model_v4 Galactokinase (EC 2.7.1.6) 0.9698 118 380 GO:0004335
GO:0005524
GO:0005829
GO:0006012
AF-A0A353C545-F1-model_v4 Galactokinase 0.9686 227 380 GO:0004335
GO:0005524
GO:0005829
GO:0006012
AF-A0A7J6LUM3-F1-model_v4 Galactokinase 0.9676 4 378 GO:0004335
GO:0005524
GO:0005829
GO:0006012
GO:0016020

Feature Viewer

pLDDT pTM Quality
93 0.9 High
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Predicted Structure (AlphaFold2)

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