F186824

General Info

Members Datasets Scaffolds Average Seq Length
142 101 135 200

Family's Representative Sequence

Representative Sequence 3300048907|Ga0496104_0400934|Ga0496104_0400934_194_928
Length 237
Sequence VRETSAERGCVAQPVDGAGHFVESRPVLMVGLTGGIGAGKSTVAASLAARGAVVIDADAIAREVVEPGTPTLAKLVERFGPEILHDDGSLDRPALAAVAFKDDETRKELEAITHPAIGEEFLRRVAESPPNAVVIHDVPLLVESKRGFQYAAVIVVEAPLETRLDRLESRGVPRDDASRRIGLQATDEERRAIATWVVDNAGDLDQLEVQLREIWTDLQRRADEAARETDPASDPET

Samples

Sample ID Description Type Environment
1 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
2 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
3 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
4 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
5 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
6 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
7 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
10 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
11 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
12 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
13 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
20 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
21 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
22 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
23 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
24 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
25 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
26 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
27 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
28 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
29 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
30 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
31 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
32 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
43 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
44 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
45 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
46 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
47 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
48 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
49 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
50 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
51 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
52 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
53 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
54 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
55 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
56 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
57 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
58 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
59 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
60 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
61 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
62 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
63 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
64 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
65 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
66 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
67 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
68 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
69 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
70 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
71 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
72 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
73 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
74 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
75 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
76 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
77 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
78 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
79 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
80 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
81 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
82 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
83 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
84 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
85 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
86 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
87 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
88 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
89 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
90 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
93 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
94 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
95 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
96 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
97 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
98 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
99 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
100 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
101 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 92.25
Metatranscriptomes 2.82
Isolates 4.93

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.97
Nodule 0
Rhizoplane 8.45
Rhizosphere 69.72
Stem 0
Stem Tuber 0
Unclassified 9.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10004430 3300002067 Bacteria 4722
2 rootL2_10273133 3300003322 Bacteria 1010
3 Ga0055539_1000008 3300003752 Bacteria 537665
4 Ga0055533_1000001 3300003756 Bacteria 1863437
5 Ga0055525_1000569 3300003759 Bacteria 16457
6 Ga0055541_1007071 3300003841 Bacteria 1867
7 Ga0070670_100695100 3300005331 Bacteria 914
8 Ga0070714_101045818 3300005435 Bacteria 795
9 Ga0070710_10010117 3300005437 Bacteria 4629
10 Ga0068855_100988604 3300005563 Bacteria 885
11 Ga0068856_100003501 3300005614 Bacteria 15851
12 Ga0068864_100565254 3300005618 Bacteria 1101
13 Ga0075363_100213676 3300006048 Bacteria 1104
14 Ga0105241_10218015 3300009174 Bacteria 1602
15 Ga0105238_10078177 3300009551 Bacteria 3299
16 Ga0105238_10085484 3300009551 Bacteria 3142
17 Ga0105238_10349316 3300009551 Bacteria 1468
18 Ga0105239_10036404 3300010375 Bacteria 5403
19 Ga0105239_10471808 3300010375 Bacteria 1425
20 Ga0197907_10154752 3300020069 Bacteria 877
21 Ga0206356_10988832 3300020070 Bacteria 2329
22 Ga0206354_10611980 3300020081 Bacteria 4290
23 Ga0206353_11634264 3300020082 Bacteria 3728
24 Ga0213876_10037628 3300021384 Bacteria 2553
25 Ga0209566_100050 3300025225 Bacteria 234653
26 Ga0209674_100001 3300025226 Bacteria 4013750
27 Ga0209563_100001 3300025230 Bacteria 4013775
28 Ga0209563_100524 3300025230 Bacteria 12967
29 Ga0209677_100001 3300025253 Bacteria 4013787
30 Ga0209677_100838 3300025253 Bacteria 15233
31 Ga0207647_10133937 3300025904 Bacteria 1455
32 Ga0207705_10289823 3300025909 Bacteria 1254
33 Ga0207654_10509227 3300025911 Bacteria 851
34 Ga0207671_10387040 3300025914 Bacteria 1111
35 Ga0207694_10325448 3300025924 Bacteria 1269
36 Ga0207650_10391573 3300025925 Bacteria 1149
37 Ga0207664_10746674 3300025929 Bacteria 880
38 Ga0207667_10031964 3300025949 Bacteria 5677
39 Ga0207639_10407102 3300026041 Bacteria 1227
40 Ga0207678_10293087 3300026067 Bacteria 1398
41 Ga0265327_10012706 3300031251 Bacteria 5656
42 Ga0265327_10109029 3300031251 Bacteria 1326
43 Ga0307513_10006664 3300031456 Bacteria 15068
44 Ga0307410_11260117 3300031852 Bacteria 646
45 Ga0307406_10190538 3300031901 Bacteria 1501
46 Ga0307409_100009360 3300031995 Bacteria 6015
47 Ga0307409_100678952 3300031995 Bacteria 1027
48 Ga0307411_10022623 3300032005 Bacteria 3705
49 Ga0307411_10491541 3300032005 Bacteria 1036
50 Ga0373925_0009117 3300037068 Bacteria 7221
51 Ga0395899_0113990 3300037312 Bacteria 1941
52 Ga0395899_0559290 3300037312 Bacteria 734
53 Ga0395900_0217978 3300037418 Bacteria 1925
54 Ga0395898_0609179 3300037466 Bacteria 1035
55 Ga0395898_0970038 3300037466 Bacteria 787
56 Ga0395901_0065773 3300038443 Bacteria 3776
57 Ga0436365_1323535 3300039437 Bacteria 4222
58 Ga0436365_1654604 3300039437 Bacteria 1176
59 Ga0451853_0308634 3300041512 Bacteria 950
60 Ga0439446_0194513 3300042156 Bacteria 683
61 Ga0466969_0145618 3300044656 Bacteria 1093
62 Ga0466972_0025749 3300044658 Bacteria 2914
63 Ga0466972_0284350 3300044658 Bacteria 773
64 Ga0466965_0022415 3300044683 Bacteria 3044
65 Ga0466965_0216228 3300044683 Bacteria 1020
66 Ga0466966_0109041 3300044684 Bacteria 1708
67 Ga0466961_0013786 3300044693 Bacteria 5180
68 Ga0466961_0039329 3300044693 Bacteria 3032
69 Ga0466961_0416674 3300044693 Bacteria 814
70 Ga0466963_0002067 3300044694 Bacteria 11078
71 Ga0466963_0048122 3300044694 Bacteria 2816
72 Ga0466963_0168731 3300044694 Bacteria 1525
73 Ga0466963_0338198 3300044694 Bacteria 1060
74 Ga0466963_0509229 3300044694 Bacteria 850
75 Ga0466971_0088680 3300044719 Bacteria 1415
76 Ga0466968_0007125 3300044735 Bacteria 4244
77 Ga0466968_0261435 3300044735 Bacteria 824
78 Ga0466970_0066864 3300044765 Bacteria 1929
79 Ga0466970_0172578 3300044765 Bacteria 1199
80 Ga0466957_0201206 3300044842 Bacteria 1308
81 Ga0466957_0231307 3300044842 Bacteria 1224
82 Ga0466960_0038981 3300044901 Bacteria 2238
83 Ga0466959_0187278 3300045049 Bacteria 1445
84 Ga0466958_0021328 3300045836 Bacteria 3784
85 Ga0466958_0339693 3300045836 Bacteria 966
86 Ga0466967_0002393 3300045976 Bacteria 11637
87 Ga0466967_0053706 3300045976 Bacteria 3542
88 Ga0466967_0063386 3300045976 Bacteria 3284
89 Ga0466967_0173361 3300045976 Bacteria 2031
90 Ga0466967_0345603 3300045976 Bacteria 1439
91 Ga0466967_0800056 3300045976 Bacteria 936
92 Ga0466967_0825048 3300045976 Bacteria 921
93 Ga0466967_1073592 3300045976 Bacteria 802
94 Ga0466967_1179751 3300045976 Bacteria 763
95 Ga0495590_0001547 3300046457 Bacteria 9886
96 Ga0495638_0057799 3300046460 Bacteria 2405
97 Ga0495668_0195929 3300046616 Bacteria 1106
98 Ga0495625_0239496 3300046660 Bacteria 1182
99 Ga0495588_0046823 3300046674 Bacteria 2219
100 Ga0495658_0123550 3300046683 Bacteria 1568
101 Ga0495636_0017126 3300047318 Bacteria 2899
102 Ga0495636_0077483 3300047318 Bacteria 1427
103 Ga0495672_0092457 3300047320 Bacteria 1658
104 Ga0495675_0030560 3300047444 Bacteria 3437
105 Ga0495686_0408036 3300047472 Bacteria 728
106 Ga0495615_0002647 3300048090 Bacteria 2897
107 Ga0495615_0006219 3300048090 Bacteria 2197
108 Ga0496104_0108733 3300048907 Bacteria 2658
109 Ga0496104_0400934 3300048907 Bacteria 1284
110 Ga0496105_0267616 3300048908 Bacteria 1381
111 Ga0496106_0702941 3300048909 Bacteria 806
112 Ga0496108_0168187 3300048911 Bacteria 1896
113 Ga0496109_0022368 3300048912 Bacteria 5599
114 Ga0496109_0149069 3300048912 Bacteria 2190
115 Ga0496112_0003015 3300048915 Bacteria 13766
116 Ga0496112_0026675 3300048915 Bacteria 5565
117 Ga0496112_0259680 3300048915 Bacteria 1687
118 Ga0496112_0481641 3300048915 Bacteria 1177
119 Ga0496114_0136297 3300048917 Bacteria 2123
120 Ga0496117_0021626 3300048920 Bacteria 5196
121 Ga0496117_0110795 3300048920 Bacteria 1710
122 Ga0496118_0109975 3300048921 Bacteria 1832
123 Ga0496118_0226196 3300048921 Bacteria 1084
124 Ga0501036_0007199 3300049572 Bacteria 9064
125 Ga0501046_0011238 3300049580 Bacteria 7664
126 Ga0501070_0004302 3300049586 Bacteria 12239
127 Ga0501081_0415475 3300049743 Bacteria 997
128 nmdc:mga03n38_94929_c1 3300050490 Bacteria 1427
129 nmdc:mga00v17_400075_c1 3300050491 Bacteria 892
130 Ga0500593_132136 3300053117 Bacteria 995
131 Ga0500568_0043475 3300053139 Bacteria 1795
132 Ga0500616_0000125 3300053153 Bacteria 135146
133 Ga0500616_0002164 3300053153 Bacteria 17011
134 Ga0501084_0903882 3300054114 Bacteria 742
135 Ga0501082_0448078 3300060353 Bacteria 1128

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044901 Ga0466960_0038981 Ga0466960_0038981_1386_1994 166
2 3300037312 Ga0395899_0559290 Ga0395899_0559290_24_542 172
3 3300044694 Ga0466963_0509229 Ga0466963_0509229_162_818 176
4 3300045976 Ga0466967_0002393 Ga0466967_0002393_8401_9057 176
5 3300044694 Ga0466963_0002067 Ga0466963_0002067_3115_3744 179
6 3300045976 Ga0466967_0063386 Ga0466967_0063386_366_995 179
7 3300047318 Ga0495636_0017126 Ga0495636_0017126_837_1433 183
8 3300048090 Ga0495615_0006219 Ga0495615_0006219_608_1204 183
9 3300046683 Ga0495658_0123550 Ga0495658_0123550_344_919 191
10 3300044683 Ga0466965_0216228 Ga0466965_0216228_269_892 193
11 3300044693 Ga0466961_0416674 Ga0466961_0416674_53_643 193
12 3300044694 Ga0466963_0168731 Ga0466963_0168731_98_721 193
13 3300044719 Ga0466971_0088680 Ga0466971_0088680_65_688 193
14 3300044842 Ga0466957_0201206 Ga0466957_0201206_96_719 193
15 3300045976 Ga0466967_0053706 Ga0466967_0053706_2310_2924 193
16 3300045976 Ga0466967_1179751 Ga0466967_1179751_52_642 193
17 iso_pu_bacteria 2862290372 2862297301 193
18 iso_pu_bacteria 2875391855 2875393170 193
19 iso_pu_bacteria 2884693830 2884697680 193
20 iso_pu_bacteria 2895427314 2895435513 193
21 iso_pu_bacteria 3006425503 3006426426 193
22 iso_pu_bacteria 8023623736 8023631283 193
23 3300005614 Ga0068856_100003501 Ga0068856_10000350112 194
24 3300005618 Ga0068864_100565254 Ga0068864_1005652542 194
25 3300009174 Ga0105241_10218015 Ga0105241_102180154 194
26 3300009551 Ga0105238_10349316 Ga0105238_103493163 194
27 3300010375 Ga0105239_10036404 Ga0105239_100364042 194
28 3300010375 Ga0105239_10471808 Ga0105239_104718082 194
29 3300025904 Ga0207647_10133937 Ga0207647_101339372 194
30 3300025911 Ga0207654_10509227 Ga0207654_105092271 194
31 3300025949 Ga0207667_10031964 Ga0207667_100319642 194
32 3300026041 Ga0207639_10407102 Ga0207639_104071022 194
33 3300037068 Ga0373925_0009117 Ga0373925_0009117_1712_2311 194
34 3300039437 Ga0436365_1323535 Ga0436365_1323535_748_1356 194
35 3300039437 Ga0436365_1654604 Ga0436365_1654604_137_748 194
36 3300044693 Ga0466961_0039329 Ga0466961_0039329_1046_1630 194
37 3300045976 Ga0466967_0800056 Ga0466967_0800056_218_811 194
38 3300048907 Ga0496104_0108733 Ga0496104_0108733_1136_1741 194
39 3300048912 Ga0496109_0149069 Ga0496109_0149069_137_742 194
40 3300048915 Ga0496112_0481641 Ga0496112_0481641_441_1073 194
41 3300048917 Ga0496114_0136297 Ga0496114_0136297_1104_1709 194
42 3300049743 Ga0501081_0415475 Ga0501081_0415475_23_625 194
43 3300060353 Ga0501082_0448078 Ga0501082_0448078_381_980 194
44 3300025914 Ga0207671_10387040 Ga0207671_103870402 195
45 3300031852 Ga0307410_11260117 Ga0307410_112601171 195
46 3300032005 Ga0307411_10022623 Ga0307411_100226237 195
47 3300042156 Ga0439446_0194513 Ga0439446_0194513_78_671 195
48 3300045976 Ga0466967_0825048 Ga0466967_0825048_136_732 195
49 iso_pu_bacteria 2939657138 2939657967 195
50 3300005563 Ga0068855_100988604 Ga0068855_1009886042 196
51 3300009551 Ga0105238_10078177 Ga0105238_100781773 196
52 3300009551 Ga0105238_10085484 Ga0105238_100854842 196
53 3300021384 Ga0213876_10037628 Ga0213876_100376282 196
54 3300025909 Ga0207705_10289823 Ga0207705_102898234 196
55 3300025924 Ga0207694_10325448 Ga0207694_103254482 196
56 3300031251 Ga0265327_10012706 Ga0265327_100127062 196
57 3300031251 Ga0265327_10109029 Ga0265327_101090292 196
58 3300031901 Ga0307406_10190538 Ga0307406_101905383 196
59 3300031995 Ga0307409_100009360 Ga0307409_10000936010 196
60 3300031995 Ga0307409_100678952 Ga0307409_1006789521 196
61 3300032005 Ga0307411_10491541 Ga0307411_104915412 196
62 3300037418 Ga0395900_0217978 Ga0395900_0217978_525_1124 196
63 3300037466 Ga0395898_0609179 Ga0395898_0609179_242_841 196
64 3300038443 Ga0395901_0065773 Ga0395901_0065773_1787_2386 196
65 3300044694 Ga0466963_0048122 Ga0466963_0048122_1331_1927 196
66 3300044842 Ga0466957_0231307 Ga0466957_0231307_195_788 196
67 3300045836 Ga0466958_0339693 Ga0466958_0339693_327_920 196
68 3300045976 Ga0466967_0173361 Ga0466967_0173361_1141_1737 196
69 3300045976 Ga0466967_0345603 Ga0466967_0345603_814_1407 196
70 3300045976 Ga0466967_1073592 Ga0466967_1073592_175_768 196
71 3300046674 Ga0495588_0046823 Ga0495588_0046823_1459_2055 196
72 3300048090 Ga0495615_0002647 Ga0495615_0002647_1224_1820 196
73 3300048907 Ga0496104_0400934 Ga0496104_0400934_194_928 196
74 3300048908 Ga0496105_0267616 Ga0496105_0267616_686_1282 196
75 3300048909 Ga0496106_0702941 Ga0496106_0702941_166_762 196
76 3300048911 Ga0496108_0168187 Ga0496108_0168187_14_610 196
77 3300048912 Ga0496109_0022368 Ga0496109_0022368_1040_1636 196
78 3300048915 Ga0496112_0003015 Ga0496112_0003015_2792_3388 196
79 3300048915 Ga0496112_0026675 Ga0496112_0026675_2808_3542 196
80 3300048915 Ga0496112_0259680 Ga0496112_0259680_946_1542 196
81 3300054114 Ga0501084_0903882 Ga0501084_0903882_17_652 196
82 3300031456 Ga0307513_10006664 Ga0307513_100066642 197
83 3300041512 Ga0451853_0308634 Ga0451853_0308634_135_743 197
84 3300044656 Ga0466969_0145618 Ga0466969_0145618_446_1045 197
85 3300046460 Ga0495638_0057799 Ga0495638_0057799_195_797 197
86 3300047318 Ga0495636_0077483 Ga0495636_0077483_344_958 197
87 3300047444 Ga0495675_0030560 Ga0495675_0030560_1696_2298 197
88 3300047472 Ga0495686_0408036 Ga0495686_0408036_14_616 197
89 3300049572 Ga0501036_0007199 Ga0501036_0007199_2615_3265 197
90 3300049580 Ga0501046_0011238 Ga0501046_0011238_5999_6619 197
91 3300053117 Ga0500593_132136 Ga0500593_132136_214_816 197
92 3300053153 Ga0500616_0002164 Ga0500616_0002164_2438_3040 197
93 3300005437 Ga0070710_10010117 Ga0070710_100101174 199
94 3300044694 Ga0466963_0338198 Ga0466963_0338198_100_708 199
95 3300044765 Ga0466970_0172578 Ga0466970_0172578_244_852 199
96 3300002067 JGI24735J21928_10004430 JGI24735J21928_100044302 200
97 3300003322 rootL2_10273133 rootL2_102731331 200
98 3300003752 Ga0055539_1000008 Ga0055539_1000008194 200
99 3300003756 Ga0055533_1000001 Ga0055533_1000001877 200
100 3300003759 Ga0055525_1000569 Ga0055525_100056913 200
101 3300003841 Ga0055541_1007071 Ga0055541_10070712 200
102 3300005331 Ga0070670_100695100 Ga0070670_1006951001 200
103 3300005435 Ga0070714_101045818 Ga0070714_1010458181 200
104 3300006048 Ga0075363_100213676 Ga0075363_1002136762 200
105 3300020069 Ga0197907_10154752 Ga0197907_101547521 200
106 3300020070 Ga0206356_10988832 Ga0206356_109888322 200
107 3300020081 Ga0206354_10611980 Ga0206354_106119803 200
108 3300020082 Ga0206353_11634264 Ga0206353_116342642 200
109 3300025225 Ga0209566_100050 Ga0209566_100050111 200
110 3300025226 Ga0209674_100001 Ga0209674_100001877 200
111 3300025230 Ga0209563_100001 Ga0209563_100001877 200
112 3300025230 Ga0209563_100524 Ga0209563_1005249 200
113 3300025253 Ga0209677_100001 Ga0209677_100001877 200
114 3300025253 Ga0209677_100838 Ga0209677_1008382 200
115 3300025925 Ga0207650_10391573 Ga0207650_103915732 200
116 3300025929 Ga0207664_10746674 Ga0207664_107466742 200
117 3300026067 Ga0207678_10293087 Ga0207678_102930872 200
118 3300037312 Ga0395899_0113990 Ga0395899_0113990_1149_1751 200
119 3300037466 Ga0395898_0970038 Ga0395898_0970038_173_775 200
120 3300044658 Ga0466972_0025749 Ga0466972_0025749_26_628 200
121 3300044658 Ga0466972_0284350 Ga0466972_0284350_40_642 200
122 3300044683 Ga0466965_0022415 Ga0466965_0022415_1928_2530 200
123 3300044684 Ga0466966_0109041 Ga0466966_0109041_1015_1635 200
124 3300044693 Ga0466961_0013786 Ga0466961_0013786_3701_4321 200
125 3300044735 Ga0466968_0007125 Ga0466968_0007125_2911_3513 200
126 3300044735 Ga0466968_0261435 Ga0466968_0261435_74_676 200
127 3300044765 Ga0466970_0066864 Ga0466970_0066864_64_666 200
128 3300045049 Ga0466959_0187278 Ga0466959_0187278_108_710 200
129 3300045836 Ga0466958_0021328 Ga0466958_0021328_1164_1784 200
130 3300046457 Ga0495590_0001547 Ga0495590_0001547_2266_2883 200
131 3300046616 Ga0495668_0195929 Ga0495668_0195929_323_940 200
132 3300046660 Ga0495625_0239496 Ga0495625_0239496_72_689 200
133 3300047320 Ga0495672_0092457 Ga0495672_0092457_301_918 200
134 3300048920 Ga0496117_0021626 Ga0496117_0021626_3635_4237 200
135 3300048920 Ga0496117_0110795 Ga0496117_0110795_588_1190 200
136 3300048921 Ga0496118_0109975 Ga0496118_0109975_359_961 200
137 3300048921 Ga0496118_0226196 Ga0496118_0226196_442_1056 200
138 3300049586 Ga0501070_0004302 Ga0501070_0004302_11226_11840 200
139 3300050490 nmdc:mga03n38_94929_c1 nmdc:mga03n38_94929_c1_583_1200 200
140 3300050491 nmdc:mga00v17_400075_c1 nmdc:mga00v17_400075_c1_153_770 200
141 3300053139 Ga0500568_0043475 Ga0500568_0043475_135_752 200
142 3300053153 Ga0500616_0000125 Ga0500616_0000125_40257_40874 200

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01121

CoaE

Dephospho-CoA kinase

28

206

0.98

PF13238

AAA_18

AAA domain

30

192

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1n3b-assembly1.cif.gz_C crystal structure of dephosphocoenzyme a kinase from escherichia coli 0.9482 2 197
1n3b-assembly1.cif.gz_A crystal structure of dephosphocoenzyme a kinase from escherichia coli 0.9464 2 197
1vht-assembly3.cif.gz_C crystal structure of dephospho-coa kinase with bis(adenosine)-5'-triphosphate 0.9438 2 195
1vhl-assembly3.cif.gz_C crystal structure of dephospho-coa kinase with adenosine-5'-diphosphate 0.934 2 195
1vhl-assembly2.cif.gz_B crystal structure of dephospho-coa kinase with adenosine-5'-diphosphate 0.9316 2 197
ID Description Score Start End Superfamily
af_O74414_1_201_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9584 1 200 3.40.50.300
af_O74414_1_201_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9537 1 200 3.40.50.300
af_Q8WVC6_1_203_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9526 1 199 3.40.50.300
af_Q8IL34_72_272_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9443 1 195 3.40.50.300
af_Q8WVC6_1_203_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9434 1 199 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7X5QZP5-F1-model_v4 Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A kinase) 0.991 1 196 GO:0004140
GO:0005524
GO:0005737
GO:0015937
AF-A0A349CY85-F1-model_v4 Dephospho-CoA kinase (EC 2.7.1.24) 0.978 1 180 GO:0004140
GO:0005524
GO:0005737
GO:0015937
AF-A0A512DFE1-F1-model_v4 Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A kinase) 0.9768 2 196 GO:0004140
GO:0005524
GO:0005737
GO:0015937
AF-A0A2E0SWF8-F1-model_v4 Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A kinase) 0.9761 1 199 GO:0004140
GO:0005524
GO:0005737
GO:0015937
AF-A0A8A5U2Q7-F1-model_v4 deleted 0.9758 1 193

Feature Viewer

pLDDT pTM Quality
94.4 0.86 High
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Predicted Structure (AlphaFold2)

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