F186368

General Info

Members Datasets Scaffolds Average Seq Length
142 107 284 318

Family's Representative Sequence

Representative Sequence 3300037312|Ga0395899_0006371|Ga0395899_0006371_4677_5738
Length 353
Sequence LVPGTEWVRSRHGNNVRIHAGAESPERSKEHKIRAVVVTRTGGPEVLEVQDLPAPQPEEGELLVDVEAVGVNYRDVYERNGAYGGAPPFVAGVEGAGTVRAVGANVTEFSNGDRVAWKNAPGSYAEQIALDATQAVPIPNDISTEQAAAALLQGLTAHYLAASTYPVEAGDAVLVHAAAGGVGLLLTQIVKSRGGRVIATTSTEEKASLARAAGADEVIDYDGFADQVRNLTDGNGVAVVYDGVGNATFDESLRSLRRRGTMVLYGAASGAVPPFDPMRLEHEGSLFLTRPTLRHYTAERAELLELARHVFGLIADGQLDVRIGARYPLEDARTAHEDLEGRKTTGKLLLLPR

Samples

Sample ID Description Type Environment
1 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
10 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
11 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
12 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
13 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
14 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
15 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
16 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
17 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
18 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
19 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
20 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
21 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
22 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
23 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
24 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
25 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
26 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
27 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
43 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
44 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
45 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
46 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
47 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
48 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
49 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
50 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
51 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
52 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
53 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
54 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
55 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
56 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
57 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
58 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
59 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
60 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
61 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
62 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
63 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
64 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
65 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
66 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
67 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
68 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
69 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
70 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
71 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
72 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
73 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
74 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
75 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
78 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
79 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
82 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
85 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
86 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
87 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
88 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
89 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
90 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
91 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
92 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
93 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
94 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
95 2585427649 Amycolatopsis japonica MG417-CF17, DSM 44213 Isolate Unclassified
96 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
97 2675903058 Actinopolymorpha cephalotaxi CPCC 202808 Isolate Rhizosphere
98 2728369276 Kineococcus rhizosphaerae DSM 19711 Isolate Rhizosphere
99 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
100 2827628540 Actinopolymorpha cephalotaxi DSM 45117 Isolate Rhizosphere
101 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
102 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
103 2899359706 Amycolatopsis anabasis EGI 650086 Isolate Unclassified
104 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
105 2915768154 Amycolatopsis pittospori PIP199 Isolate Unclassified
106 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
107 8055157932 Frankia umida Ag45/Mut15 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 90.14
Metatranscriptomes 0
Isolates 9.86

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0.7
Rhizoplane 7.75
Rhizosphere 82.39
Stem 0
Stem Tuber 0.7
Unclassified 4.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395899_0006371 3300037312 Bacteria 9138
2 rootL2_10201917 3300003322 Bacteria 3425
3 Ga0070666_10040160 3300005335 Bacteria 3122
4 Ga0070680_100099402 3300005336 Bacteria 2414
5 Ga0068868_100004918 3300005338 Bacteria 9385
6 Ga0070668_100001363 3300005347 Bacteria 17488
7 Ga0070708_100000044 3300005445 Bacteria 81802
8 Ga0070681_10032533 3300005458 Bacteria 5234
9 Ga0070684_100220909 3300005535 Bacteria 1729
10 Ga0068857_100174913 3300005577 Bacteria 1953
11 Ga0068859_100249886 3300005617 Bacteria 1864
12 Ga0068864_100103479 3300005618 Bacteria 2528
13 Ga0068863_100000591 3300005841 Bacteria 36891
14 Ga0068858_100075876 3300005842 Bacteria 3123
15 Ga0068860_100000124 3300005843 Bacteria 124227
16 Ga0081540_1000418 3300005983 Bacteria 41960
17 Ga0070717_10000943 3300006028 Bacteria 19377
18 Ga0070717_10303215 3300006028 Unclassified 1420
19 Ga0075434_100018064 3300006871 Bacteria 6805
20 Ga0097620_100249887 3300006931 Bacteria 1864
21 Ga0111539_10077611 3300009094 Bacteria 3909
22 Ga0105245_10017131 3300009098 Bacteria 6323
23 Ga0105245_10156802 3300009098 Bacteria 2157
24 Ga0105248_10243104 3300009177 Bacteria 2026
25 Ga0157372_10089401 3300013307 Bacteria 3499
26 Ga0157372_10213815 3300013307 Bacteria 2234
27 Ga0163163_10435490 3300014325 Bacteria 1370
28 Ga0157379_10142925 3300014968 Bacteria 2157
29 Ga0213873_10000763 3300021358 Bacteria 5210
30 Ga0207699_10013992 3300025906 Bacteria 4122
31 Ga0207693_10126523 3300025915 Bacteria 2009
32 Ga0207700_10052170 3300025928 Unclassified 3056
33 Ga0207664_10017914 3300025929 Bacteria 5203
34 Ga0207665_10011600 3300025939 Bacteria 5790
35 Ga0207711_10117948 3300025941 Bacteria 2367
36 Ga0207679_10096617 3300025945 Bacteria 2299
37 Ga0207679_10222100 3300025945 Unclassified 1590
38 Ga0207668_10001782 3300025972 Bacteria 12565
39 Ga0207658_10002789 3300025986 Bacteria 12579
40 Ga0207702_10014687 3300026078 Bacteria 6498
41 Ga0207641_10002289 3300026088 Bacteria 17837
42 Ga0207676_10113153 3300026095 Bacteria 2275
43 Ga0207683_10287658 3300026121 Bacteria 1503
44 Ga0268266_10011526 3300028379 Bacteria 7676
45 Ga0268264_10000027 3300028381 Bacteria 440852
46 Ga0307511_10009003 3300030521 Bacteria 9961
47 Ga0307518_10015807 3300031838 Bacteria 5405
48 Ga0307410_10187199 3300031852 Bacteria 1572
49 Ga0307411_10008376 3300032005 Bacteria 5351
50 Ga0373937_0383655 3300036401 Bacteria 1333
51 Ga0373937_0478572 3300036401 Bacteria 1183
52 Ga0395899_0005289 3300037312 Bacteria 10021
53 Ga0395900_0000672 3300037418 Bacteria 45487
54 Ga0395900_0001415 3300037418 Bacteria 28723
55 Ga0395900_0023324 3300037418 Bacteria 6333
56 Ga0395898_0003608 3300037466 Bacteria 17236
57 Ga0395898_0008824 3300037466 Bacteria 10623
58 Ga0395898_0216856 3300037466 Unclassified 1825
59 Ga0395905_0001274 3300037471 Bacteria 31077
60 Ga0395905_0010889 3300037471 Bacteria 8810
61 Ga0395905_0019879 3300037471 Bacteria 6363
62 Ga0395905_0039232 3300037471 Bacteria 4443
63 Ga0395905_0232300 3300037471 Bacteria 1724
64 Ga0436364_0289011 3300037853 Bacteria 3412
65 Ga0395901_0001087 3300038443 Bacteria 29038
66 Ga0395901_0009684 3300038443 Bacteria 9772
67 Ga0395901_0015004 3300038443 Bacteria 7875
68 Ga0395901_0022540 3300038443 Bacteria 6455
69 Ga0395901_0041225 3300038443 Bacteria 4784
70 Ga0395901_0107760 3300038443 Bacteria 2925
71 Ga0395901_0204943 3300038443 Bacteria 2066
72 Ga0395901_0282854 3300038443 Bacteria 1723
73 Ga0395901_0381443 3300038443 Bacteria 1450
74 Ga0436365_0234985 3300039437 Bacteria 4196
75 Ga0436365_0879203 3300039437 Bacteria 4249
76 Ga0436360_0036628 3300039438 Bacteria 1807
77 Ga0436360_0399028 3300039438 Bacteria 1591
78 Ga0436361_0367151 3300039447 Unclassified 1696
79 Ga0436362_0212225 3300039453 Bacteria 3830
80 Ga0436362_0512759 3300039453 Unclassified 1196
81 Ga0436362_0840964 3300039453 Bacteria 17334
82 Ga0466969_0011401 3300044656 Bacteria 4705
83 Ga0466966_0012054 3300044684 Bacteria 5729
84 Ga0466961_0053861 3300044693 Bacteria 2566
85 Ga0466971_0092684 3300044719 Bacteria 1384
86 Ga0466968_0113711 3300044735 Bacteria 1219
87 Ga0466970_0041698 3300044765 Bacteria 2439
88 Ga0466960_0131339 3300044901 Bacteria 1322
89 Ga0466959_0002278 3300045049 Bacteria 12242
90 Ga0466959_0494147 3300045049 Bacteria 827
91 Ga0466958_0002896 3300045836 Bacteria 8759
92 Ga0466958_0051221 3300045836 Bacteria 2499
93 Ga0466958_0133292 3300045836 Bacteria 1561
94 Ga0466967_0013907 3300045976 Bacteria 6242
95 Ga0466967_0025590 3300045976 Bacteria 4870
96 Ga0495674_0056066 3300047319 Bacteria 3454
97 Ga0496102_0011722 3300048905 Bacteria 7566
98 Ga0496102_0168811 3300048905 Bacteria 2060
99 Ga0496104_0008748 3300048907 Bacteria 9001
100 Ga0496105_0146496 3300048908 Bacteria 1942
101 Ga0496108_0003284 3300048911 Bacteria 12995
102 Ga0496108_0159444 3300048911 Bacteria 1949
103 Ga0496109_0000866 3300048912 Bacteria 25221
104 Ga0496109_0412336 3300048912 Unclassified 1276
105 Ga0496110_0005765 3300048913 Bacteria 9729
106 Ga0496111_0002351 3300048914 Bacteria 11397
107 Ga0496113_0148597 3300048916 Bacteria 1847
108 Ga0501031_0038047 3300049568 Bacteria 3140
109 Ga0501034_0041834 3300049571 Bacteria 4637
110 Ga0501036_0043925 3300049572 Bacteria 3785
111 Ga0501036_0447513 3300049572 Bacteria 1076
112 Ga0501039_0008999 3300049575 Bacteria 7606
113 Ga0501040_0029382 3300049576 Bacteria 3710
114 Ga0501041_0026567 3300049577 Bacteria 3484
115 Ga0501046_0143104 3300049580 Bacteria 1808
116 Ga0501047_0043132 3300049581 Bacteria 4357
117 Ga0501048_0061607 3300049582 Bacteria 2656
118 Ga0501048_0265770 3300049582 Bacteria 1219
119 Ga0501071_0007710 3300049587 Bacteria 7095
120 Ga0501072_0262458 3300049588 Bacteria 1375
121 Ga0501076_0061331 3300049592 Bacteria 2992
122 Ga0501079_0133016 3300049741 Bacteria 1936
123 Ga0501080_0109774 3300049742 Bacteria 2557
124 Ga0501081_0066436 3300049743 Bacteria 2508
125 Ga0501045_0013408 3300049824 Bacteria 5790
126 nmdc:mga0n895_233944_c1 3300050512 Bacteria 1865
127 Ga0501082_0121216 3300060353 Bacteria 2267
128 Ga0530510_0011359 3300061734 Bacteria 6249
129 2515854621 2515154155 Bacteria 7985436
130 2586062266 2585427649 Bacteria 9053857
131 2644197369 2643221635 Bacteria 2632343
132 2676473390 2675903058 Bacteria 6822861
133 2729907179 2728369276 Bacteria 5610032
134 2809588560 2808606522 Bacteria 9488490
135 2827631900 2827628540 Bacteria 6858585
136 2866556783 2866552031 Bacteria 5824618
137 2873317903 2873314349 Bacteria 8512634
138 2899365272 2899359706 Bacteria 10940472
139 2899372870 2899370129 Bacteria 6781179
140 2915770298 2915768154 Bacteria 8424322
141 8001787065 8001781756 Bacteria 9586736
142 8055161436 8055157932 Bacteria 6429399
143 Ga0395899_0006371
144 rootL2_10201917
145 Ga0070666_10040160
146 Ga0070680_100099402
147 Ga0068868_100004918
148 Ga0070668_100001363
149 Ga0070708_100000044
150 Ga0070681_10032533
151 Ga0070684_100220909
152 Ga0068857_100174913
153 Ga0068859_100249886
154 Ga0068864_100103479
155 Ga0068863_100000591
156 Ga0068858_100075876
157 Ga0068860_100000124
158 Ga0081540_1000418
159 Ga0070717_10000943
160 Ga0070717_10303215
161 Ga0075434_100018064
162 Ga0097620_100249887
163 Ga0111539_10077611
164 Ga0105245_10017131
165 Ga0105245_10156802
166 Ga0105248_10243104
167 Ga0157372_10089401
168 Ga0157372_10213815
169 Ga0163163_10435490
170 Ga0157379_10142925
171 Ga0213873_10000763
172 Ga0207699_10013992
173 Ga0207693_10126523
174 Ga0207700_10052170
175 Ga0207664_10017914
176 Ga0207665_10011600
177 Ga0207711_10117948
178 Ga0207679_10096617
179 Ga0207679_10222100
180 Ga0207668_10001782
181 Ga0207658_10002789
182 Ga0207702_10014687
183 Ga0207641_10002289
184 Ga0207676_10113153
185 Ga0207683_10287658
186 Ga0268266_10011526
187 Ga0268264_10000027
188 Ga0307511_10009003
189 Ga0307518_10015807
190 Ga0307410_10187199
191 Ga0307411_10008376
192 Ga0373937_0383655
193 Ga0373937_0478572
194 Ga0395899_0005289
195 Ga0395900_0000672
196 Ga0395900_0001415
197 Ga0395900_0023324
198 Ga0395898_0003608
199 Ga0395898_0008824
200 Ga0395898_0216856
201 Ga0395905_0001274
202 Ga0395905_0010889
203 Ga0395905_0019879
204 Ga0395905_0039232
205 Ga0395905_0232300
206 Ga0436364_0289011
207 Ga0395901_0001087
208 Ga0395901_0009684
209 Ga0395901_0015004
210 Ga0395901_0022540
211 Ga0395901_0041225
212 Ga0395901_0107760
213 Ga0395901_0204943
214 Ga0395901_0282854
215 Ga0395901_0381443
216 Ga0436365_0234985
217 Ga0436365_0879203
218 Ga0436360_0036628
219 Ga0436360_0399028
220 Ga0436361_0367151
221 Ga0436362_0212225
222 Ga0436362_0512759
223 Ga0436362_0840964
224 Ga0466969_0011401
225 Ga0466966_0012054
226 Ga0466961_0053861
227 Ga0466971_0092684
228 Ga0466968_0113711
229 Ga0466970_0041698
230 Ga0466960_0131339
231 Ga0466959_0002278
232 Ga0466959_0494147
233 Ga0466958_0002896
234 Ga0466958_0051221
235 Ga0466958_0133292
236 Ga0466967_0013907
237 Ga0466967_0025590
238 Ga0495674_0056066
239 Ga0496102_0011722
240 Ga0496102_0168811
241 Ga0496104_0008748
242 Ga0496105_0146496
243 Ga0496108_0003284
244 Ga0496108_0159444
245 Ga0496109_0000866
246 Ga0496109_0412336
247 Ga0496110_0005765
248 Ga0496111_0002351
249 Ga0496113_0148597
250 Ga0501031_0038047
251 Ga0501034_0041834
252 Ga0501036_0043925
253 Ga0501036_0447513
254 Ga0501039_0008999
255 Ga0501040_0029382
256 Ga0501041_0026567
257 Ga0501046_0143104
258 Ga0501047_0043132
259 Ga0501048_0061607
260 Ga0501048_0265770
261 Ga0501071_0007710
262 Ga0501072_0262458
263 Ga0501076_0061331
264 Ga0501079_0133016
265 Ga0501080_0109774
266 Ga0501081_0066436
267 Ga0501045_0013408
268 nmdc:mga0n895_233944_c1
269 Ga0501082_0121216
270 Ga0530510_0011359
271 2515854621
272 2586062266
273 2644197369
274 2676473390
275 2729907179
276 2809588560
277 2827631900
278 2866556783
279 2873317903
280 2899365272
281 2899372870
282 2915770298
283 8001787065
284 8055161436

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08240

ADH_N

Alcohol dehydrogenase GroES-like domain

58

140

0.9

PF00107

ADH_zinc_N

Zinc-binding dehydrogenase

181

308

0.89

PF13602

ADH_zinc_N_2

Zinc-binding dehydrogenase

213

350

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
1qor-assembly1.cif.gz_B crystal structure of escherichia coli quinone oxidoreductase complexed with nadph 0.9659 1 322
8j6e-assembly1.cif.gz_A structure insights into the nadph quinone oxidoreductase from leishmania donovani 0.9637 2 321
1qor-assembly1.cif.gz_B crystal structure of escherichia coli quinone oxidoreductase complexed with nadph 0.963 1 322
3jyl-assembly1.cif.gz_A crystal structures of pseudomonas syringae pv. tomato dc3000 quinone oxidoreductase 0.9625 2 322
4rvu-assembly2.cif.gz_C the native structure of mycobacterial rv1454c complexed with nadph 0.957 1 322
ID Description Score Start End Superfamily
af_I1LVH0_176_320_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9971 121 266 3.40.50.720
af_I1LVH0_176_320_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9903 121 266 3.40.50.720
af_P28304_1_127_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9786 2 123 3.90.180.10
af_O74489_2_127_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9764 2 123 3.90.180.10
af_Q4DTF4_127_270_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9752 121 262 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A528FI11-F1-model_v4 Quinone oxidoreductase 0.984 106 322 GO:0003960
GO:0005829
GO:0008270
GO:0035925
GO:0070402
AF-A0A0A8YLD7-F1-model_v4 Enoyl reductase (ER) domain-containing protein 0.9835 2 322 GO:0003960
GO:0005829
GO:0035925
GO:0070402
AF-A0A659YLB2-F1-model_v4 deleted 0.9829 156 322
AF-A0A699GSK4-F1-model_v4 GroES-like zinc-binding alcohol dehydrogenase family protein 0.9827 119 322 GO:0003960
GO:0005829
GO:0035925
GO:0070402
AF-A0A5B7AB61-F1-model_v4 Putative quinone oxidoreductase isoform X2 (EC 1.6.5.5) 0.982 119 322 GO:0003960
GO:0005829
GO:0035925
GO:0070402

Map