F185609

General Info

Members Datasets Scaffolds Average Seq Length
142 106 141 197

Family's Representative Sequence

Representative Sequence 3300009176|Ga0105242_10126709|Ga0105242_101267092
Length 235
Sequence MRGKQGWGVRPNSCDLKFEFSQTGVLKHFMLREGMETDLEPVSWVRMIRAVEKVRDRLLRSARALDEMQVTYTIVGCNAVAAWVSRVDEAAVRNTRDVDILLRRADFERARQALDSAGFIYRHAASLGQPGGLDLFLDGPHASARDALHILFAGEKVRPDSHAPSPDILESEAGDHFRLINLEALVRMKLTAFRDRDRTHLRDLLEVGLIDSGWLDRFETELRQRFKSILDAPEG

Samples

Sample ID Description Type Environment
1 2920107658 Aquisphaera insulae JC669 Isolate Rhizosphere
2 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
16 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
21 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
25 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
26 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
31 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
32 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
36 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
39 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
40 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
62 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
63 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
64 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
65 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
66 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
67 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
68 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
69 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
70 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
71 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
72 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
73 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
74 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
75 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
76 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
77 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
78 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
79 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
80 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
81 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
82 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
83 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
84 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
85 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
86 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
87 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
88 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
89 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
90 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
91 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
92 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
93 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
94 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
95 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
96 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
101 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
102 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
103 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
104 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
105 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
106 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.89
Metatranscriptomes 1.41
Isolates 0.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.7
Nodule 0
Rhizoplane 0.7
Rhizosphere 97.18
Stem 0
Stem Tuber 0
Unclassified 1.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0058861_11334647 3300004800 Bacteria 1211
2 Ga0070658_10552155 3300005327 Bacteria 997
3 Ga0070683_100769817 3300005329 Unclassified 922
4 Ga0070680_100084333 3300005336 Bacteria 2624
5 Ga0070660_100061321 3300005339 Unclassified 2920
6 Ga0070689_100482448 3300005340 Bacteria 1059
7 Ga0070661_100246869 3300005344 Bacteria 1376
8 Ga0070674_100036412 3300005356 Bacteria 3303
9 Ga0070714_100221691 3300005435 Bacteria 1738
10 Ga0070714_100271011 3300005435 Unclassified 1574
11 Ga0070713_100096769 3300005436 Bacteria 2549
12 Ga0070713_100877112 3300005436 Bacteria 862
13 Ga0070700_100425652 3300005441 Unclassified 1004
14 Ga0070681_10014244 3300005458 Bacteria 7914
15 Ga0070679_100985492 3300005530 Bacteria 787
16 Ga0070672_100021453 3300005543 Bacteria 4726
17 Ga0070686_100423727 3300005544 Bacteria 1017
18 Ga0068855_100010369 3300005563 Bacteria 11242
19 Ga0068855_100164384 3300005563 Bacteria 2517
20 Ga0068855_100264731 3300005563 Bacteria 1914
21 Ga0068855_100443756 3300005563 Bacteria 1417
22 Ga0068855_100444069 3300005563 Unclassified 1416
23 Ga0068857_100000740 3300005577 Bacteria 24369
24 Ga0068859_101190088 3300005617 Unclassified 839
25 Ga0068864_100214612 3300005618 Bacteria 1773
26 Ga0068851_10168223 3300005834 Unclassified 1208
27 Ga0068863_100135864 3300005841 Unclassified 2349
28 Ga0068863_100713717 3300005841 Bacteria 997
29 Ga0068858_100055830 3300005842 Bacteria 3651
30 Ga0068858_100111891 3300005842 Unclassified 2550
31 Ga0068858_100748140 3300005842 Unclassified 952
32 Ga0068860_100082079 3300005843 Unclassified 3066
33 Ga0070712_100315784 3300006175 Unclassified 1269
34 Ga0075428_100002619 3300006844 Bacteria 19583
35 Ga0075428_100195712 3300006844 Bacteria 2186
36 Ga0075428_100488032 3300006844 Bacteria 1318
37 Ga0097620_101190069 3300006931 Unclassified 839
38 Ga0105240_10202523 3300009093 Unclassified 2325
39 Ga0105240_10616032 3300009093 Unclassified 1193
40 Ga0111539_10007600 3300009094 Bacteria 13850
41 Ga0111539_11011216 3300009094 Bacteria 966
42 Ga0105247_10092072 3300009101 Unclassified 1926
43 Ga0105242_10126709 3300009176 Bacteria 2198
44 Ga0105237_10044637 3300009545 Bacteria 4463
45 Ga0105237_10090638 3300009545 Bacteria 3046
46 Ga0105237_10367532 3300009545 Bacteria 1443
47 Ga0105239_10106537 3300010375 Unclassified 3105
48 Ga0105239_10333296 3300010375 Bacteria 1712
49 Ga0157369_10076365 3300013105 Bacteria 3591
50 Ga0157374_11566879 3300013296 Unclassified 683
51 Ga0163162_10625549 3300013306 Unclassified 1201
52 Ga0157372_10020229 3300013307 Bacteria 7178
53 Ga0157372_11358528 3300013307 Unclassified 819
54 Ga0157376_10242986 3300014969 Bacteria 1678
55 Ga0206356_10834264 3300020070 Bacteria 1167
56 Ga0207699_10458197 3300025906 Unclassified 916
57 Ga0207705_10006530 3300025909 Bacteria 8637
58 Ga0207705_10462905 3300025909 Bacteria 984
59 Ga0207707_10141582 3300025912 Unclassified 2103
60 Ga0207695_10056446 3300025913 Unclassified 4085
61 Ga0207671_10025323 3300025914 Bacteria 4456
62 Ga0207660_10187144 3300025917 Bacteria 1611
63 Ga0207657_10292720 3300025919 Unclassified 1291
64 Ga0207649_10142465 3300025920 Bacteria 1642
65 Ga0207652_10075365 3300025921 Unclassified 2940
66 Ga0207652_10703713 3300025921 Unclassified 901
67 Ga0207700_10170007 3300025928 Bacteria 1818
68 Ga0207664_10230694 3300025929 Bacteria 1609
69 Ga0207670_10184515 3300025936 Bacteria 1574
70 Ga0207670_10828821 3300025936 Unclassified 772
71 Ga0207669_10022987 3300025937 Bacteria 3321
72 Ga0207691_10034137 3300025940 Bacteria 4733
73 Ga0207661_10879104 3300025944 Unclassified 825
74 Ga0207667_10001811 3300025949 Bacteria 26919
75 Ga0207667_10020432 3300025949 Bacteria 7365
76 Ga0207667_10128522 3300025949 Bacteria 2610
77 Ga0207667_10197879 3300025949 Bacteria 2062
78 Ga0207667_10385573 3300025949 Unclassified 1428
79 Ga0207703_10257921 3300026035 Bacteria 1575
80 Ga0207703_10390906 3300026035 Bacteria 1288
81 Ga0207703_11047884 3300026035 Unclassified 783
82 Ga0207708_10632030 3300026075 Unclassified 910
83 Ga0207641_10474141 3300026088 Bacteria 1212
84 Ga0207674_10010995 3300026116 Bacteria 10182
85 Ga0268266_10015576 3300028379 Bacteria 6519
86 Ga0265337_1007375 3300028556 Bacteria 4118
87 Ga0265334_10013465 3300028573 Bacteria 3423
88 Ga0265323_10028288 3300028653 Bacteria 2102
89 Ga0265336_10004892 3300028666 Bacteria 5020
90 Ga0265336_10046932 3300028666 Bacteria 1312
91 Ga0265338_10006294 3300028800 Bacteria 15174
92 Ga0265338_10025502 3300028800 Bacteria 5997
93 Ga0265338_10268744 3300028800 Unclassified 1250
94 Ga0265327_10058470 3300031251 Bacteria 1978
95 Ga0265316_10076139 3300031344 Bacteria 2579
96 Ga0307508_10174465 3300031616 Bacteria 1753
97 Ga0307516_10341282 3300031730 Unclassified 1165
98 Ga0307409_100024937 3300031995 Bacteria 4183
99 Ga0373931_0613529 3300035691 Unclassified 712
100 Ga0395900_0039423 3300037418 Unclassified 4867
101 Ga0395900_0400432 3300037418 Unclassified 1337
102 Ga0395905_0039386 3300037471 Unclassified 4434
103 Ga0395901_0221336 3300038443 Unclassified 1978
104 Ga0451576_0347954 3300045051 Bacteria 1552
105 Ga0451576_1509318 3300045051 Bacteria 698
106 Ga0495592_0000008 3300046454 Bacteria 175382
107 Ga0495582_0460730 3300046473 Unclassified 734
108 Ga0495639_0186601 3300046475 Unclassified 1011
109 Ga0495662_0095772 3300046476 Unclassified 1450
110 Ga0495594_0535276 3300046499 Unclassified 665
111 Ga0495618_0002538 3300046514 Bacteria 11689
112 Ga0495628_0000166 3300046516 Bacteria 57276
113 Ga0495628_0275118 3300046516 Unclassified 1252
114 Ga0495630_0010373 3300046517 Bacteria 6723
115 Ga0495652_0160033 3300046529 Bacteria 1749
116 Ga0495652_0244847 3300046529 Unclassified 1332
117 Ga0495640_0023501 3300046533 Bacteria 4488
118 Ga0495586_0000418 3300046535 Bacteria 25772
119 Ga0495645_0002948 3300046543 Bacteria 11531
120 Ga0495645_0030364 3300046543 Bacteria 3936
121 Ga0495622_0022904 3300046557 Bacteria 2911
122 Ga0495599_0073614 3300046678 Bacteria 2132
123 Ga0495646_0157134 3300046680 Unclassified 1261
124 Ga0495613_0359666 3300046689 Bacteria 998
125 Ga0495624_0019281 3300046690 Bacteria 4556
126 Ga0495581_0151430 3300047315 Bacteria 1354
127 Ga0495674_0099791 3300047319 Bacteria 2471
128 Ga0496109_0219298 3300048912 Bacteria 1789
129 Ga0501033_0156336 3300049570 Bacteria 1643
130 Ga0501034_0004877 3300049571 Bacteria 14802
131 Ga0501034_0264254 3300049571 Bacteria 1663
132 Ga0501036_0609429 3300049572 Unclassified 905
133 Ga0501040_0502703 3300049576 Unclassified 874
134 Ga0501068_0328464 3300049584 Unclassified 981
135 Ga0501072_0112487 3300049588 Unclassified 2168
136 Ga0501080_0006036 3300049742 Bacteria 10854
137 Ga0501080_0028597 3300049742 Bacteria 5188
138 Ga0501083_0089129 3300049744 Bacteria 2039
139 Ga0501044_0364309 3300049823 Bacteria 1363
140 nmdc:mga08y16_8979_c1 3300050511 Bacteria 10499
141 Ga0500641_0118590 3300053096 Unclassified 1140

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2920107658 2920107800 175
2 3300005436 Ga0070713_100096769 Ga0070713_1000967693 179
3 3300025949 Ga0207667_10020432 Ga0207667_100204323 179
4 3300005340 Ga0070689_100482448 Ga0070689_1004824482 183
5 3300005563 Ga0068855_100444069 Ga0068855_1004440692 183
6 3300005577 Ga0068857_100000740 Ga0068857_1000007404 183
7 3300005841 Ga0068863_100713717 Ga0068863_1007137171 183
8 3300006844 Ga0075428_100002619 Ga0075428_1000026194 183
9 3300009094 Ga0111539_10007600 Ga0111539_100076003 183
10 3300013105 Ga0157369_10076365 Ga0157369_100763653 183
11 3300013307 Ga0157372_10020229 Ga0157372_100202293 183
12 3300025936 Ga0207670_10828821 Ga0207670_108288212 183
13 3300025949 Ga0207667_10385573 Ga0207667_103855732 183
14 3300026116 Ga0207674_10010995 Ga0207674_100109956 183
15 3300037418 Ga0395900_0039423 Ga0395900_0039423_2543_3112 183
16 3300037418 Ga0395900_0400432 Ga0395900_0400432_22_573 183
17 3300037471 Ga0395905_0039386 Ga0395905_0039386_2504_3073 183
18 3300038443 Ga0395901_0221336 Ga0395901_0221336_1179_1748 183
19 3300045051 Ga0451576_1509318 Ga0451576_1509318_117_686 183
20 3300046473 Ga0495582_0460730 Ga0495582_0460730_165_716 183
21 3300046543 Ga0495645_0030364 Ga0495645_0030364_3039_3590 183
22 3300049571 Ga0501034_0004877 Ga0501034_0004877_13630_14181 183
23 3300049576 Ga0501040_0502703 Ga0501040_0502703_23_574 183
24 3300049588 Ga0501072_0112487 Ga0501072_0112487_699_1250 183
25 3300050511 nmdc:mga08y16_8979_c1 nmdc:mga08y16_8979_c1_4038_4589 183
26 3300053096 Ga0500641_0118590 Ga0500641_0118590_336_887 183
27 3300005356 Ga0070674_100036412 Ga0070674_1000364122 186
28 3300048912 Ga0496109_0219298 Ga0496109_0219298_94_669 191
29 3300005563 Ga0068855_100010369 Ga0068855_1000103698 194
30 3300005618 Ga0068864_100214612 Ga0068864_1002146122 194
31 3300005842 Ga0068858_100055830 Ga0068858_1000558304 194
32 3300005842 Ga0068858_100111891 Ga0068858_1001118912 194
33 3300009101 Ga0105247_10092072 Ga0105247_100920722 194
34 3300009545 Ga0105237_10044637 Ga0105237_100446376 194
35 3300009545 Ga0105237_10090638 Ga0105237_100906383 194
36 3300010375 Ga0105239_10106537 Ga0105239_101065373 194
37 3300010375 Ga0105239_10333296 Ga0105239_103332962 194
38 3300013307 Ga0157372_11358528 Ga0157372_113585282 194
39 3300025909 Ga0207705_10006530 Ga0207705_100065307 194
40 3300025914 Ga0207671_10025323 Ga0207671_100253232 194
41 3300025919 Ga0207657_10292720 Ga0207657_102927202 194
42 3300025949 Ga0207667_10001811 Ga0207667_100018117 194
43 3300026035 Ga0207703_10257921 Ga0207703_102579212 194
44 3300026035 Ga0207703_10390906 Ga0207703_103909062 194
45 3300005329 Ga0070683_100769817 Ga0070683_1007698171 195
46 3300005344 Ga0070661_100246869 Ga0070661_1002468692 195
47 3300005435 Ga0070714_100221691 Ga0070714_1002216912 195
48 3300005435 Ga0070714_100271011 Ga0070714_1002710112 195
49 3300005436 Ga0070713_100877112 Ga0070713_1008771121 195
50 3300005441 Ga0070700_100425652 Ga0070700_1004256522 195
51 3300005543 Ga0070672_100021453 Ga0070672_1000214532 195
52 3300005544 Ga0070686_100423727 Ga0070686_1004237272 195
53 3300005834 Ga0068851_10168223 Ga0068851_101682232 195
54 3300009093 Ga0105240_10616032 Ga0105240_106160322 195
55 3300009545 Ga0105237_10367532 Ga0105237_103675322 195
56 3300020070 Ga0206356_10834264 Ga0206356_108342641 195
57 3300025906 Ga0207699_10458197 Ga0207699_104581972 195
58 3300025920 Ga0207649_10142465 Ga0207649_101424652 195
59 3300025928 Ga0207700_10170007 Ga0207700_101700073 195
60 3300025929 Ga0207664_10230694 Ga0207664_102306942 195
61 3300025936 Ga0207670_10184515 Ga0207670_101845151 195
62 3300025937 Ga0207669_10022987 Ga0207669_100229874 195
63 3300025940 Ga0207691_10034137 Ga0207691_100341374 195
64 3300025944 Ga0207661_10879104 Ga0207661_108791041 195
65 3300031995 Ga0307409_100024937 Ga0307409_1000249373 195
66 3300046499 Ga0495594_0535276 Ga0495594_0535276_23_649 195
67 3300049570 Ga0501033_0156336 Ga0501033_0156336_449_1036 195
68 3300049742 Ga0501080_0006036 Ga0501080_0006036_2828_3433 195
69 3300049742 Ga0501080_0028597 Ga0501080_0028597_3989_4576 195
70 3300049823 Ga0501044_0364309 Ga0501044_0364309_58_645 195
71 3300004800 Ga0058861_11334647 Ga0058861_113346472 196
72 3300005327 Ga0070658_10552155 Ga0070658_105521551 196
73 3300005336 Ga0070680_100084333 Ga0070680_1000843332 196
74 3300005339 Ga0070660_100061321 Ga0070660_1000613213 196
75 3300005458 Ga0070681_10014244 Ga0070681_100142447 196
76 3300005530 Ga0070679_100985492 Ga0070679_1009854921 196
77 3300005563 Ga0068855_100164384 Ga0068855_1001643843 196
78 3300005563 Ga0068855_100264731 Ga0068855_1002647313 196
79 3300005563 Ga0068855_100443756 Ga0068855_1004437562 196
80 3300005617 Ga0068859_101190088 Ga0068859_1011900881 196
81 3300005841 Ga0068863_100135864 Ga0068863_1001358642 196
82 3300005842 Ga0068858_100748140 Ga0068858_1007481402 196
83 3300005843 Ga0068860_100082079 Ga0068860_1000820792 196
84 3300006175 Ga0070712_100315784 Ga0070712_1003157842 196
85 3300006844 Ga0075428_100195712 Ga0075428_1001957123 196
86 3300006844 Ga0075428_100488032 Ga0075428_1004880322 196
87 3300006931 Ga0097620_101190069 Ga0097620_1011900691 196
88 3300009093 Ga0105240_10202523 Ga0105240_102025232 196
89 3300009094 Ga0111539_11011216 Ga0111539_110112162 196
90 3300009176 Ga0105242_10126709 Ga0105242_101267092 196
91 3300013296 Ga0157374_11566879 Ga0157374_115668791 196
92 3300013306 Ga0163162_10625549 Ga0163162_106255491 196
93 3300014969 Ga0157376_10242986 Ga0157376_102429862 196
94 3300025909 Ga0207705_10462905 Ga0207705_104629052 196
95 3300025912 Ga0207707_10141582 Ga0207707_101415822 196
96 3300025913 Ga0207695_10056446 Ga0207695_100564462 196
97 3300025917 Ga0207660_10187144 Ga0207660_101871442 196
98 3300025921 Ga0207652_10075365 Ga0207652_100753652 196
99 3300025921 Ga0207652_10703713 Ga0207652_107037131 196
100 3300025949 Ga0207667_10128522 Ga0207667_101285222 196
101 3300025949 Ga0207667_10197879 Ga0207667_101978792 196
102 3300026035 Ga0207703_11047884 Ga0207703_110478841 196
103 3300026075 Ga0207708_10632030 Ga0207708_106320301 196
104 3300026088 Ga0207641_10474141 Ga0207641_104741412 196
105 3300028379 Ga0268266_10015576 Ga0268266_100155764 196
106 3300028556 Ga0265337_1007375 Ga0265337_10073753 196
107 3300028573 Ga0265334_10013465 Ga0265334_100134652 196
108 3300028653 Ga0265323_10028288 Ga0265323_100282882 196
109 3300028666 Ga0265336_10004892 Ga0265336_100048922 196
110 3300028666 Ga0265336_10046932 Ga0265336_100469322 196
111 3300028800 Ga0265338_10006294 Ga0265338_1000629411 196
112 3300028800 Ga0265338_10025502 Ga0265338_100255023 196
113 3300028800 Ga0265338_10268744 Ga0265338_102687442 196
114 3300031251 Ga0265327_10058470 Ga0265327_100584702 196
115 3300031344 Ga0265316_10076139 Ga0265316_100761392 196
116 3300031616 Ga0307508_10174465 Ga0307508_101744652 196
117 3300031730 Ga0307516_10341282 Ga0307516_103412821 196
118 3300035691 Ga0373931_0613529 Ga0373931_0613529_47_688 196
119 3300045051 Ga0451576_0347954 Ga0451576_0347954_87_734 196
120 3300046454 Ga0495592_0000008 Ga0495592_0000008_71962_72591 196
121 3300046475 Ga0495639_0186601 Ga0495639_0186601_239_868 196
122 3300046476 Ga0495662_0095772 Ga0495662_0095772_129_758 196
123 3300046514 Ga0495618_0002538 Ga0495618_0002538_6559_7188 196
124 3300046516 Ga0495628_0000166 Ga0495628_0000166_45929_46558 196
125 3300046516 Ga0495628_0275118 Ga0495628_0275118_268_858 196
126 3300046517 Ga0495630_0010373 Ga0495630_0010373_2412_3041 196
127 3300046529 Ga0495652_0160033 Ga0495652_0160033_598_1227 196
128 3300046529 Ga0495652_0244847 Ga0495652_0244847_644_1234 196
129 3300046533 Ga0495640_0023501 Ga0495640_0023501_2982_3611 196
130 3300046535 Ga0495586_0000418 Ga0495586_0000418_7932_8561 196
131 3300046543 Ga0495645_0002948 Ga0495645_0002948_2720_3349 196
132 3300046557 Ga0495622_0022904 Ga0495622_0022904_570_1160 196
133 3300046678 Ga0495599_0073614 Ga0495599_0073614_841_1470 196
134 3300046680 Ga0495646_0157134 Ga0495646_0157134_355_984 196
135 3300046689 Ga0495613_0359666 Ga0495613_0359666_346_945 196
136 3300046690 Ga0495624_0019281 Ga0495624_0019281_2461_3090 196
137 3300047315 Ga0495581_0151430 Ga0495581_0151430_64_693 196
138 3300047319 Ga0495674_0099791 Ga0495674_0099791_625_1254 196
139 3300049571 Ga0501034_0264254 Ga0501034_0264254_1050_1643 196
140 3300049572 Ga0501036_0609429 Ga0501036_0609429_279_890 196
141 3300049584 Ga0501068_0328464 Ga0501068_0328464_154_762 196
142 3300049744 Ga0501083_0089129 Ga0501083_0089129_349_1002 196

Structural Annotation

Top 5 Hits

ID Description Score Start End
7wg5-assembly1.cif.gz_J cyclic electron transport supercomplex ndh-psi from arabidopsis 0.6488 60 113
5cfu-assembly1.cif.gz_A "crystal structure of ant(2"")-ia in complex with adenylyl-2""-tobramycin" 0.6408 19 189
8an4-assembly2.cif.gz_B ment1 toxin (rv0078a) from mycobacterium tuberculosis h37rv 0.6362 21 193
6l7u-assembly1.cif.gz_D crystal structure of fkrp in complex with ba ion, ba-sad data 0.6307 4 117
3ghj-assembly1.cif.gz_A-2 crystal structure from the mobile metagenome of halifax harbour sewage outfall: integron cassette protein hfx_cass4 0.628 60 111
ID Description Score Start End Superfamily
af_A0A1D6NCB7_69_347_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.7408 68 113 3.40.50.2000
af_L7N686_1_158_3.30.460.40 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2; 0.6922 21 166 3.30.460.40
af_Q4DK72_164_289_3.30.460.40 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2; 0.6578 34 113 3.30.460.40
af_A0A1D6PZL5_15_277_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.6465 68 111 3.40.50.2000
3ztwB02 Alpha Beta;2-Layer Sandwich;Threonyl-tRNA Synthetase; Chain A, domain 2;Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 0.646 22 92 3.30.980.20
ID Description Score Start End GO Terms
AF-A0A5M4D5D3-F1-model_v4 Nucleotidyltransferase family protein 0.9935 17 196
AF-A0A2N9NKS2-F1-model_v4 Nucleotidyltransferase family protein 0.9859 4 196
AF-A0A4P5XZS7-F1-model_v4 Nucleotidyltransferase family protein 0.9851 1 196
AF-A0A257X1U4-F1-model_v4 Uncharacterized protein 0.9786 3 196
AF-A0A1C3EFJ6-F1-model_v4 Nucleotidyltransferase 0.9764 5 193

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pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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