F184932

General Info

Members Datasets Scaffolds Average Seq Length
142 105 284 277

Family's Representative Sequence

Representative Sequence 3300005435|Ga0070714_100013309|Ga0070714_1000133096
Length 311
Sequence MQEPEHNAAEQQKPGRQAELFAERQIAREQGPARLPHLETHAETPATGSLARVIFDVRNVSIYYGSFKAVTDVSLPIHENEVTAFIGSSGSGKSTVLRAFNRMNDLVPGARLEGTITYHGTDLYGKDVSATAVRRRIGMVFQKPNPFPKSVYDNVAYGPRINGLRNKAKLDEIVERSLRGAVLWDEVKSRLKQSALALSGGQAQRLCIARTIAVEPDVVLMDEPASALDPIATGAIEDLIRELKRNYTIVIVTHNMQQATRVSDRTAFFYVLTDARSDTRTGVLVEHGPTQQVFEDPQDPRTQAYVTGRMG

Samples

Sample ID Description Type Environment
1 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
10 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
18 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
19 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
20 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
21 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
24 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
25 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
26 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
27 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
28 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
29 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
30 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
31 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
50 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
51 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
52 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
53 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
54 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
55 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
56 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
57 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
58 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
59 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
60 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
61 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
62 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
63 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
64 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
65 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
66 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
67 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
68 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
69 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
70 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
71 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
72 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
73 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
74 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
75 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
76 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
77 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
78 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
79 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
80 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
81 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
82 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
83 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
84 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
85 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
86 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
87 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
88 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
89 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
90 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
91 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
93 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
94 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
95 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
96 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
97 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
98 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
99 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
101 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
102 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
103 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
104 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
105 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.3
Metatranscriptomes 0.7
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.11
Nodule 0
Rhizoplane 3.52
Rhizosphere 85.21
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070714_100013309 3300005435 Bacteria 6590
2 JGI24740J21852_10006484 3300001979 Bacteria 4841
3 Ga0070658_10027695 3300005327 Bacteria 4548
4 Ga0070682_100185764 3300005337 Bacteria 1456
5 Ga0070689_100041361 3300005340 Bacteria 3538
6 Ga0070675_100000010 3300005354 Bacteria 243396
7 Ga0070674_100000008 3300005356 Bacteria 143844
8 Ga0070659_100149073 3300005366 Bacteria 1907
9 Ga0070659_100366745 3300005366 Bacteria 1211
10 Ga0070714_100000826 3300005435 Bacteria 21909
11 Ga0070713_100006544 3300005436 Bacteria 8091
12 Ga0070713_100019905 3300005436 Bacteria 5137
13 Ga0070713_100056164 3300005436 Bacteria 3274
14 Ga0070713_100098432 3300005436 Bacteria 2529
15 Ga0070710_10000369 3300005437 Bacteria 21100
16 Ga0070710_10265763 3300005437 Bacteria 1108
17 Ga0070711_100004242 3300005439 Bacteria 8430
18 Ga0070711_100104396 3300005439 Bacteria 2067
19 Ga0070662_100474099 3300005457 Bacteria 1041
20 Ga0070698_100006497 3300005471 Bacteria 12682
21 Ga0070698_100782491 3300005471 Bacteria 898
22 Ga0070684_100133749 3300005535 Bacteria 2238
23 Ga0068857_100517159 3300005577 Bacteria 1121
24 Ga0068856_100544447 3300005614 Bacteria 1182
25 Ga0068866_10000031 3300005718 Bacteria 56943
26 Ga0070717_10038679 3300006028 Bacteria 3878
27 Ga0070717_10267486 3300006028 Bacteria 1513
28 Ga0075365_10066633 3300006038 Bacteria 2416
29 Ga0070715_10017394 3300006163 Bacteria 2722
30 Ga0105244_10005168 3300009036 Bacteria 8746
31 Ga0105240_10004568 3300009093 Bacteria 20995
32 Ga0105240_10993018 3300009093 Bacteria 898
33 Ga0105247_10160811 3300009101 Bacteria 1487
34 Ga0105242_10062273 3300009176 Bacteria 3070
35 Ga0157373_10026948 3300013100 Bacteria 4147
36 Ga0157371_10090825 3300013102 Bacteria 2163
37 Ga0157370_10037194 3300013104 Bacteria 4719
38 Ga0157370_10166064 3300013104 Bacteria 2053
39 Ga0157380_10003475 3300014326 Bacteria 10819
40 Ga0154015_1466183 3300020610 Bacteria 1783
41 Ga0213875_10009929 3300021388 Bacteria 4794
42 Ga0213875_10110638 3300021388 Bacteria 1282
43 Ga0207692_10000108 3300025898 Bacteria 24597
44 Ga0207642_10000034 3300025899 Bacteria 43362
45 Ga0207699_10004600 3300025906 Bacteria 6596
46 Ga0207699_10007556 3300025906 Bacteria 5320
47 Ga0207684_10038064 3300025910 Bacteria 4082
48 Ga0207695_10029711 3300025913 Bacteria 6032
49 Ga0207663_10004545 3300025916 Bacteria 6911
50 Ga0207660_10011976 3300025917 Bacteria 5663
51 Ga0207652_10022493 3300025921 Bacteria 5216
52 Ga0207646_10194132 3300025922 Bacteria 1833
53 Ga0207659_10000001 3300025926 Bacteria 660958
54 Ga0207700_10001223 3300025928 Bacteria 14707
55 Ga0207700_10026547 3300025928 Bacteria 4040
56 Ga0207664_10001872 3300025929 Bacteria 13842
57 Ga0207664_10046337 3300025929 Bacteria 3412
58 Ga0207664_10070714 3300025929 Bacteria 2809
59 Ga0207690_10448519 3300025932 Bacteria 1037
60 Ga0207686_10039783 3300025934 Bacteria 2854
61 Ga0207670_10062365 3300025936 Bacteria 2547
62 Ga0207669_10000004 3300025937 Bacteria 196828
63 Ga0207661_10083319 3300025944 Bacteria 2646
64 Ga0207661_10359891 3300025944 Bacteria 1314
65 Ga0207698_10240859 3300026142 Bacteria 1648
66 Ga0307508_10081744 3300031616 Bacteria 2812
67 Ga0316579_10025863 3300031691 Bacteria 2653
68 Ga0316579_10178251 3300031691 Bacteria 1027
69 Ga0316578_10006322 3300031728 Bacteria 5836
70 Ga0316578_10145428 3300031728 Bacteria 1428
71 Ga0316578_10164907 3300031728 Bacteria 1335
72 Ga0316577_10003092 3300031733 Bacteria 8359
73 Ga0316577_10006353 3300031733 Bacteria 6236
74 Ga0316577_10007861 3300031733 Bacteria 5693
75 Ga0316577_10113247 3300031733 Bacteria 1522
76 Ga0307410_10324318 3300031852 Bacteria 1223
77 Ga0307406_10013170 3300031901 Bacteria 4733
78 Ga0316583_10031442 3300032133 Bacteria 1890
79 Ga0316585_10011350 3300032137 Bacteria 2627
80 Ga0316585_10089686 3300032137 Bacteria 1004
81 Ga0373953_0171327 3300035117 Bacteria 934
82 Ga0316574_0083737 3300035398 Bacteria 2028
83 Ga0373924_0077556 3300035410 Bacteria 1409
84 Ga0373935_0006227 3300035692 Bacteria 7102
85 Ga0316582_0001814 3300036647 Bacteria 9646
86 Ga0316582_0017883 3300036647 Bacteria 4111
87 Ga0316582_0021924 3300036647 Bacteria 3783
88 Ga0316584_0022540 3300036712 Bacteria 4595
89 Ga0316584_0047377 3300036712 Bacteria 3211
90 Ga0373925_0000678 3300037068 Bacteria 32007
91 Ga0373925_0079128 3300037068 Bacteria 2497
92 Ga0316581_0019931 3300037588 Bacteria 1960
93 Ga0436364_0836303 3300037853 Bacteria 1182
94 Ga0436364_1190639 3300037853 Bacteria 4942
95 Ga0400483_075471 3300039062 Bacteria 36148
96 Ga0400489_71024 3300039093 Bacteria 1821
97 Ga0400487_49065 3300039110 Bacteria 6019
98 Ga0436365_1497066 3300039437 Bacteria 3420
99 Ga0436360_1369135 3300039438 Bacteria 889
100 Ga0451837_0508462 3300041494 Bacteria 3922
101 Ga0451849_1511787 3300041505 Bacteria 1549
102 Ga0439442_022244 3300042002 Bacteria 1315
103 Ga0451577_0000107 3300042876 Bacteria 184348
104 Ga0453683_0000074 3300044673 Bacteria 150735
105 Ga0453683_0001954 3300044673 Bacteria 16705
106 Ga0453683_0002309 3300044673 Bacteria 14995
107 Ga0453683_0124984 3300044673 Bacteria 1620
108 Ga0453684_0000371 3300044712 Bacteria 184376
109 Ga0453684_0061727 3300044712 Bacteria 4809
110 Ga0453684_0248452 3300044712 Bacteria 2044
111 Ga0466959_0195221 3300045049 Bacteria 1411
112 Ga0451576_0020547 3300045051 Bacteria 7187
113 Ga0451576_0172706 3300045051 Bacteria 2256
114 Ga0466967_0030287 3300045976 Bacteria 4540
115 Ga0495652_0134168 3300046529 Bacteria 1955
116 Ga0495635_0030878 3300046663 Bacteria 3722
117 Ga0495599_0258587 3300046678 Bacteria 1058
118 Ga0495674_0252377 3300047319 Bacteria 1451
119 Ga0496104_0002333 3300048907 Bacteria 16409
120 Ga0496109_0050843 3300048912 Bacteria 3774
121 Ga0496112_0001555 3300048915 Bacteria 17724
122 Ga0496113_0066527 3300048916 Bacteria 2730
123 Ga0496115_0026751 3300048918 Bacteria 4506
124 Ga0496119_0043690 3300048922 Bacteria 2829
125 Ga0496126_0065316 3300048929 Bacteria 3257
126 Ga0501047_0039939 3300049581 Bacteria 4538
127 Ga0501070_0004968 3300049586 Bacteria 11347
128 Ga0501071_0020159 3300049587 Bacteria 4633
129 Ga0501073_0001442 3300049589 Bacteria 17577
130 Ga0501074_0000095 3300049590 Bacteria 42376
131 Ga0501075_0087681 3300049591 Bacteria 2359
132 Ga0501076_0225690 3300049592 Bacteria 1531
133 Ga0501080_0000250 3300049742 Bacteria 40604
134 Ga0501035_0089275 3300049822 Bacteria 2715
135 Ga0501044_0001357 3300049823 Bacteria 28736
136 Ga0501044_0004824 3300049823 Bacteria 15080
137 Ga0501044_0019840 3300049823 Bacteria 7180
138 nmdc:mga0yw44_36426_c1 3300050492 Bacteria 2899
139 nmdc:mga05p37_374405_c1 3300050507 Bacteria 1238
140 nmdc:mga08y16_861141_c1 3300050511 Bacteria 895
141 nmdc:mga0sz30_155280_c1 3300050516 Bacteria 1013
142 Ga0495619_0045840 3300053085 Bacteria 2873
143 Ga0070714_100013309
144 JGI24740J21852_10006484
145 Ga0070658_10027695
146 Ga0070682_100185764
147 Ga0070689_100041361
148 Ga0070675_100000010
149 Ga0070674_100000008
150 Ga0070659_100149073
151 Ga0070659_100366745
152 Ga0070714_100000826
153 Ga0070713_100006544
154 Ga0070713_100019905
155 Ga0070713_100056164
156 Ga0070713_100098432
157 Ga0070710_10000369
158 Ga0070710_10265763
159 Ga0070711_100004242
160 Ga0070711_100104396
161 Ga0070662_100474099
162 Ga0070698_100006497
163 Ga0070698_100782491
164 Ga0070684_100133749
165 Ga0068857_100517159
166 Ga0068856_100544447
167 Ga0068866_10000031
168 Ga0070717_10038679
169 Ga0070717_10267486
170 Ga0075365_10066633
171 Ga0070715_10017394
172 Ga0105244_10005168
173 Ga0105240_10004568
174 Ga0105240_10993018
175 Ga0105247_10160811
176 Ga0105242_10062273
177 Ga0157373_10026948
178 Ga0157371_10090825
179 Ga0157370_10037194
180 Ga0157370_10166064
181 Ga0157380_10003475
182 Ga0154015_1466183
183 Ga0213875_10009929
184 Ga0213875_10110638
185 Ga0207692_10000108
186 Ga0207642_10000034
187 Ga0207699_10004600
188 Ga0207699_10007556
189 Ga0207684_10038064
190 Ga0207695_10029711
191 Ga0207663_10004545
192 Ga0207660_10011976
193 Ga0207652_10022493
194 Ga0207646_10194132
195 Ga0207659_10000001
196 Ga0207700_10001223
197 Ga0207700_10026547
198 Ga0207664_10001872
199 Ga0207664_10046337
200 Ga0207664_10070714
201 Ga0207690_10448519
202 Ga0207686_10039783
203 Ga0207670_10062365
204 Ga0207669_10000004
205 Ga0207661_10083319
206 Ga0207661_10359891
207 Ga0207698_10240859
208 Ga0307508_10081744
209 Ga0316579_10025863
210 Ga0316579_10178251
211 Ga0316578_10006322
212 Ga0316578_10145428
213 Ga0316578_10164907
214 Ga0316577_10003092
215 Ga0316577_10006353
216 Ga0316577_10007861
217 Ga0316577_10113247
218 Ga0307410_10324318
219 Ga0307406_10013170
220 Ga0316583_10031442
221 Ga0316585_10011350
222 Ga0316585_10089686
223 Ga0373953_0171327
224 Ga0316574_0083737
225 Ga0373924_0077556
226 Ga0373935_0006227
227 Ga0316582_0001814
228 Ga0316582_0017883
229 Ga0316582_0021924
230 Ga0316584_0022540
231 Ga0316584_0047377
232 Ga0373925_0000678
233 Ga0373925_0079128
234 Ga0316581_0019931
235 Ga0436364_0836303
236 Ga0436364_1190639
237 Ga0400483_075471
238 Ga0400489_71024
239 Ga0400487_49065
240 Ga0436365_1497066
241 Ga0436360_1369135
242 Ga0451837_0508462
243 Ga0451849_1511787
244 Ga0439442_022244
245 Ga0451577_0000107
246 Ga0453683_0000074
247 Ga0453683_0001954
248 Ga0453683_0002309
249 Ga0453683_0124984
250 Ga0453684_0000371
251 Ga0453684_0061727
252 Ga0453684_0248452
253 Ga0466959_0195221
254 Ga0451576_0020547
255 Ga0451576_0172706
256 Ga0466967_0030287
257 Ga0495652_0134168
258 Ga0495635_0030878
259 Ga0495599_0258587
260 Ga0495674_0252377
261 Ga0496104_0002333
262 Ga0496109_0050843
263 Ga0496112_0001555
264 Ga0496113_0066527
265 Ga0496115_0026751
266 Ga0496119_0043690
267 Ga0496126_0065316
268 Ga0501047_0039939
269 Ga0501070_0004968
270 Ga0501071_0020159
271 Ga0501073_0001442
272 Ga0501074_0000095
273 Ga0501075_0087681
274 Ga0501076_0225690
275 Ga0501080_0000250
276 Ga0501035_0089275
277 Ga0501044_0001357
278 Ga0501044_0004824
279 Ga0501044_0019840
280 nmdc:mga0yw44_36426_c1
281 nmdc:mga05p37_374405_c1
282 nmdc:mga08y16_861141_c1
283 nmdc:mga0sz30_155280_c1
284 Ga0495619_0045840

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

70

226

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
8tzj-assembly1.cif.gz_A cryo-em structure of vibrio cholerae ftse/ftsx complex 0.9107 47 259
4yms-assembly1.cif.gz_A crystal structure of an amino acid abc transporter 0.9097 48 297
8fee-assembly1.cif.gz_H structure of mce1 transporter from mycobacterium smegmatis in the absence of lucb (map2) 0.9056 48 297
4jbw-assembly1.cif.gz_A crystal structure of e. coli maltose transporter malfgk2 in complex with its regulatory protein eiiaglc 0.905 48 294
4khz-assembly1.cif.gz_B crystal structure of the maltose-binding protein/maltose transporter complex in an pre-translocation conformation bound to maltoheptaose 0.904 46 295
ID Description Score Start End Superfamily
af_Q2FYQ0_38_279_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9845 50 295 3.40.50.300
af_Q2FYQ0_38_279_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9724 50 295 3.40.50.300
af_P9WQK9_23_275_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9603 50 298 3.40.50.300
af_P33360_1_239_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.919 48 300 3.40.50.300
af_Q58762_1_229_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9181 48 295 3.40.50.300
ID Description Score Start End GO Terms
AF-J5NJE4-F1-model_v4 deleted 0.9749 45 133
AF-A0A7M0SSZ7-F1-model_v4 deleted 0.9725 81 300
AF-A0A847C1I6-F1-model_v4 ATP-binding cassette domain-containing protein 0.9706 43 210 GO:0005315
GO:0005524
GO:0016020
GO:0016887
GO:0035435
AF-J0USH6-F1-model_v4 deleted 0.9677 46 246
AF-A0A774N022-F1-model_v4 ATP-binding cassette domain-containing protein 0.9632 44 139 GO:0005524
GO:0005886
GO:0016887

Map