F184891

General Info

Members Datasets Scaffolds Average Seq Length
142 84 142 559

Family's Representative Sequence

Representative Sequence 3300005365|Ga0070688_100011366|Ga0070688_1000113664
Length 586
Sequence VTRERWILVWTRLTEGLSEALRRVGLGEARHRERLELAIPRDPDHGDWTTNIALLLAREAGKPPRALAEALAAAFPPDPETFASVEVAGPGFVNFRYSPRFLDALPSVIRGSDESFGASEGGGGVSVMVEYVSANPTGPLNVVSARAAAVGAALVRLLNAAGFRAVGEFYVNDAGRQVDLLGESFAARFAETIGESRAFPEDGYRGSYVNDLAAELPQAEARAALARGDMDWFRDQALERMLAWQRKDLQAYGAEYARWFRETELHRAGKVDETLAELGARGMTYVAREPETASEDRPANREAEKAPLEEATFLRTSRFGDDMDRVVVRSNGAPTYLLPDIAYHRDKRARGFRHVIDLWGPDHHGYVPRMKAALLALGLEPDFFEVLIVQQVNLMSGGQPVKMSKRAGEFVTLRDLVDDVGADCAKFFFLMRSTSAHLDFDLDLAKRQNDENPAFYVQYAHARIASILRFAAERGLAPNPPGSVAVEDHAPEERALERRLAAFPEVVRGAAVAREPHRIPTYLMDTAAEFHRFYHACRVVSDDVEKSRRRLELTDAARIVLRNGLALMGVSAPERMSRAEAEASSV

Samples

Sample ID Description Type Environment
1 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
2 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
3 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
4 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
5 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
6 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
7 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
8 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
9 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
10 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
15 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
16 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
28 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
29 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
35 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
48 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
49 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
50 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
51 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
52 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
53 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
54 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
55 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
56 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
57 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
58 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
59 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
60 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
61 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
62 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
63 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
64 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
65 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
66 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
67 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
68 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
69 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
70 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
71 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
72 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
73 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
74 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
75 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
76 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
77 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
78 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
79 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
80 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
81 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
82 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
83 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
84 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 98.59
Stem 0
Stem Tuber 0
Unclassified 1.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070670_100010342 3300005331 Bacteria 7963
2 Ga0070689_100000592 3300005340 Bacteria 21858
3 Ga0070689_100001837 3300005340 Bacteria 13676
4 Ga0070689_100003256 3300005340 Bacteria 10774
5 Ga0070687_100000868 3300005343 Bacteria 10150
6 Ga0070688_100004443 3300005365 Bacteria 7299
7 Ga0070688_100011366 3300005365 Bacteria 4945
8 Ga0070688_100012411 3300005365 Bacteria 4774
9 Ga0070688_100017127 3300005365 Bacteria 4157
10 Ga0070709_10046644 3300005434 Bacteria 2695
11 Ga0070701_10003825 3300005438 Bacteria 6014
12 Ga0070705_100001647 3300005440 Bacteria 11693
13 Ga0070694_100038815 3300005444 Bacteria 3166
14 Ga0068867_100076032 3300005459 Bacteria 2520
15 Ga0070685_10039643 3300005466 Bacteria 2677
16 Ga0070707_100042111 3300005468 Bacteria 4371
17 Ga0070698_100031460 3300005471 Bacteria 5502
18 Ga0070698_100041698 3300005471 Bacteria 4712
19 Ga0070699_100000434 3300005518 Bacteria 40076
20 Ga0070695_100003042 3300005545 Bacteria 9770
21 Ga0070695_100004348 3300005545 Bacteria 8301
22 Ga0070695_100027407 3300005545 Bacteria 3529
23 Ga0070696_100001332 3300005546 Bacteria 16106
24 Ga0070704_100002465 3300005549 Bacteria 10392
25 Ga0070704_100028894 3300005549 Bacteria 3695
26 Ga0068859_100004035 3300005617 Bacteria 14968
27 Ga0068859_100065473 3300005617 Bacteria 3668
28 Ga0068859_100147280 3300005617 Bacteria 2430
29 Ga0068864_100003872 3300005618 Bacteria 12321
30 Ga0068864_100034339 3300005618 Bacteria 4314
31 Ga0068864_100100421 3300005618 Bacteria 2565
32 Ga0068861_100043091 3300005719 Bacteria 3385
33 Ga0097621_100078479 3300006237 Bacteria 2743
34 Ga0075428_100001114 3300006844 Bacteria 28622
35 Ga0075428_100001970 3300006844 Bacteria 22113
36 Ga0075428_100024848 3300006844 Bacteria 6628
37 Ga0075428_100074960 3300006844 Bacteria 3696
38 Ga0075430_100016853 3300006846 Bacteria 6224
39 Ga0075430_100020783 3300006846 Bacteria 5581
40 Ga0075431_100021606 3300006847 Bacteria 6583
41 Ga0075431_100029669 3300006847 Bacteria 5631
42 Ga0075431_100091589 3300006847 Bacteria 3138
43 Ga0075431_100132639 3300006847 Bacteria 2569
44 Ga0075433_10002740 3300006852 Bacteria 13467
45 Ga0075433_10014512 3300006852 Bacteria 6440
46 Ga0075433_10015139 3300006852 Bacteria 6319
47 Ga0075433_10090320 3300006852 Bacteria 2707
48 Ga0075434_100001496 3300006871 Bacteria 19732
49 Ga0075434_100003448 3300006871 Bacteria 14137
50 Ga0075434_100003696 3300006871 Bacteria 13660
51 Ga0075434_100028468 3300006871 Bacteria 5489
52 Ga0075429_100000642 3300006880 Bacteria 27010
53 Ga0075429_100002954 3300006880 Bacteria 14421
54 Ga0075429_100048232 3300006880 Bacteria 3704
55 Ga0075429_100070872 3300006880 Bacteria 3035
56 Ga0075429_100138322 3300006880 Bacteria 2132
57 Ga0075436_100001436 3300006914 Bacteria 16209
58 Ga0075436_100018436 3300006914 Bacteria 4778
59 Ga0097620_100004035 3300006931 Bacteria 14968
60 Ga0097620_100065475 3300006931 Bacteria 3668
61 Ga0097620_100147289 3300006931 Bacteria 2430
62 Ga0075435_100000112 3300007076 Bacteria 44881
63 Ga0111539_10005267 3300009094 Bacteria 16743
64 Ga0111539_10014602 3300009094 Bacteria 9803
65 Ga0111539_10121500 3300009094 Bacteria 3060
66 Ga0114129_10008055 3300009147 Bacteria 15015
67 Ga0114129_10018956 3300009147 Bacteria 9801
68 Ga0114129_10060640 3300009147 Bacteria 5289
69 Ga0114129_10102546 3300009147 Bacteria 3957
70 Ga0114129_10228249 3300009147 Bacteria 2508
71 Ga0105248_10056034 3300009177 Bacteria 4422
72 Ga0163163_10010896 3300014325 Bacteria 8212
73 Ga0157379_10003547 3300014968 Bacteria 13215
74 Ga0157379_10112207 3300014968 Bacteria 2450
75 Ga0207685_10010224 3300025905 Bacteria 2761
76 Ga0207699_10014042 3300025906 Bacteria 4118
77 Ga0207684_10020192 3300025910 Bacteria 5689
78 Ga0207662_10000696 3300025918 Bacteria 15327
79 Ga0207650_10011170 3300025925 Bacteria 6176
80 Ga0207670_10000065 3300025936 Bacteria 75480
81 Ga0207670_10001661 3300025936 Bacteria 11620
82 Ga0207711_10027265 3300025941 Bacteria 4798
83 Ga0207679_10010145 3300025945 Bacteria 6059
84 Ga0207703_10001308 3300026035 Bacteria 23046
85 Ga0207648_10032576 3300026089 Bacteria 4600
86 Ga0207648_10080280 3300026089 Bacteria 2846
87 Ga0207676_10012204 3300026095 Bacteria 6153
88 Ga0207676_10081750 3300026095 Bacteria 2625
89 Ga0207675_100008795 3300026118 Bacteria 9480
90 Ga0207675_100018605 3300026118 Bacteria 6482
91 Ga0207428_10004230 3300027907 Bacteria 13746
92 Ga0207428_10051645 3300027907 Bacteria 3286
93 Ga0265337_1004531 3300028556 Bacteria 5743
94 Ga0265319_1002202 3300028563 Bacteria 10849
95 Ga0265334_10000955 3300028573 Bacteria 14381
96 Ga0265338_10012093 3300028800 Bacteria 9865
97 Ga0265338_10016601 3300028800 Bacteria 7991
98 Ga0265330_10000137 3300031235 Bacteria 58966
99 Ga0265332_10000502 3300031238 Bacteria 26838
100 Ga0265329_10013246 3300031242 Bacteria 2946
101 Ga0265316_10000121 3300031344 Bacteria 84879
102 Ga0265314_10000048 3300031711 Bacteria 192905
103 Ga0265342_10000102 3300031712 Bacteria 94262
104 Ga0373934_0003336 3300035086 Bacteria 5881
105 Ga0373931_0005759 3300035691 Bacteria 5755
106 Ga0373931_0013528 3300035691 Bacteria 3974
107 Ga0400484_39335 3300038725 Bacteria 5280
108 Ga0400490_22786 3300038726 Unclassified 4584
109 Ga0451577_0009758 3300042876 Bacteria 9204
110 Ga0451577_0011118 3300042876 Bacteria 8541
111 Ga0451577_0011361 3300042876 Bacteria 8428
112 Ga0453684_0000036 3300044712 Bacteria 711481
113 Ga0453684_0014775 3300044712 Bacteria 12442
114 Ga0453684_0048953 3300044712 Bacteria 5580
115 Ga0451576_0008090 3300045051 Bacteria 12394
116 Ga0451576_0009153 3300045051 Bacteria 11508
117 Ga0451576_0012697 3300045051 Bacteria 9457
118 Ga0495592_0020093 3300046454 Bacteria 5078
119 Ga0495653_0098654 3300046463 Bacteria 2121
120 Ga0495582_0008891 3300046473 Bacteria 5541
121 Ga0495667_0044283 3300046559 Bacteria 2947
122 Ga0495635_0020596 3300046663 Bacteria 4593
123 Ga0495659_0001197 3300046664 Bacteria 9010
124 Ga0495657_0005457 3300046675 Bacteria 10068
125 Ga0495599_0005449 3300046678 Bacteria 7609
126 Ga0495658_0007357 3300046683 Bacteria 5444
127 Ga0495604_0040994 3300047317 Bacteria 3633
128 Ga0495676_0053126 3300047321 Bacteria 3231
129 Ga0495675_0001206 3300047444 Bacteria 15680
130 nmdc:mga05p37_81_c1 3300050507 Bacteria 84634
131 nmdc:mga09592_81815_c1 3300050508 Bacteria 2752
132 nmdc:mga0qj67_16496_c1 3300050509 Bacteria 5604
133 nmdc:mga0qj67_57345_c1 3300050509 Bacteria 3087
134 nmdc:mga06r32_17150_c1 3300050510 Bacteria 6610
135 nmdc:mga08y16_10275_c1 3300050511 Bacteria 9823
136 nmdc:mga0n895_232407_c1 3300050512 Bacteria 1871
137 nmdc:mga0n895_4749_c1 3300050512 Bacteria 11228
138 nmdc:mga0n895_60550_c1 3300050512 Bacteria 3736
139 nmdc:mga08x19_13395_c1 3300050514 Bacteria 4957
140 nmdc:mga08x19_16141_c1 3300050514 Bacteria 4551
141 nmdc:mga0a205_46251_c1 3300050515 Bacteria 4197
142 nmdc:mga0a205_82839_c1 3300050515 Bacteria 3099

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300009147 Ga0114129_10060640 Ga0114129_100606402 480
2 3300026118 Ga0207675_100018605 Ga0207675_1000186052 508
3 3300006844 Ga0075428_100024848 Ga0075428_1000248483 509
4 3300006847 Ga0075431_100091589 Ga0075431_1000915893 509
5 3300046463 Ga0495653_0098654 Ga0495653_0098654_502_2100 516
6 3300028556 Ga0265337_1004531 Ga0265337_10045315 519
7 3300028563 Ga0265319_1002202 Ga0265319_10022029 519
8 3300035691 Ga0373931_0013528 Ga0373931_0013528_1980_3614 520
9 3300035691 Ga0373931_0005759 Ga0373931_0005759_81_1703 521
10 3300038726 Ga0400490_22786 Ga0400490_22786_266_1936 521
11 3300005440 Ga0070705_100001647 Ga0070705_1000016478 522
12 3300005444 Ga0070694_100038815 Ga0070694_1000388153 522
13 3300005471 Ga0070698_100041698 Ga0070698_1000416983 522
14 3300005518 Ga0070699_100000434 Ga0070699_10000043426 522
15 3300005546 Ga0070696_100001332 Ga0070696_10000133214 522
16 3300044712 Ga0453684_0000036 Ga0453684_0000036_542045_543658 522
17 3300031235 Ga0265330_10000137 Ga0265330_100001379 525
18 3300031238 Ga0265332_10000502 Ga0265332_1000050220 525
19 3300031242 Ga0265329_10013246 Ga0265329_100132463 525
20 3300031344 Ga0265316_10000121 Ga0265316_1000012140 525
21 3300031711 Ga0265314_10000048 Ga0265314_10000048125 525
22 3300031712 Ga0265342_10000102 Ga0265342_1000010236 525
23 3300006871 Ga0075434_100028468 Ga0075434_1000284684 526
24 3300050512 nmdc:mga0n895_4749_c1 nmdc:mga0n895_4749_c1_2283_3980 526
25 3300046473 Ga0495582_0008891 Ga0495582_0008891_826_2505 527
26 3300046683 Ga0495658_0007357 Ga0495658_0007357_3372_5051 527
27 3300009094 Ga0111539_10005267 Ga0111539_100052674 528
28 3300027907 Ga0207428_10051645 Ga0207428_100516452 528
29 3300044712 Ga0453684_0014775 Ga0453684_0014775_6740_8380 529
30 3300005545 Ga0070695_100004348 Ga0070695_1000043484 530
31 3300006852 Ga0075433_10015139 Ga0075433_100151394 530
32 3300006871 Ga0075434_100003696 Ga0075434_10000369611 530
33 3300009147 Ga0114129_10102546 Ga0114129_101025464 530
34 3300050512 nmdc:mga0n895_60550_c1 nmdc:mga0n895_60550_c1_1159_2838 530
35 3300050515 nmdc:mga0a205_82839_c1 nmdc:mga0a205_82839_c1_967_2646 530
36 3300025945 Ga0207679_10010145 Ga0207679_100101454 531
37 3300005618 Ga0068864_100034339 Ga0068864_1000343392 532
38 3300028573 Ga0265334_10000955 Ga0265334_1000095512 532
39 3300028800 Ga0265338_10012093 Ga0265338_100120939 532
40 3300005549 Ga0070704_100002465 Ga0070704_1000024655 533
41 3300006844 Ga0075428_100001114 Ga0075428_10000111417 533
42 3300006844 Ga0075428_100001970 Ga0075428_10000197019 533
43 3300006846 Ga0075430_100016853 Ga0075430_1000168533 533
44 3300006847 Ga0075431_100021606 Ga0075431_1000216062 533
45 3300006847 Ga0075431_100029669 Ga0075431_1000296694 533
46 3300006880 Ga0075429_100002954 Ga0075429_1000029549 533
47 3300009147 Ga0114129_10008055 Ga0114129_100080556 533
48 3300009147 Ga0114129_10228249 Ga0114129_102282492 533
49 3300025910 Ga0207684_10020192 Ga0207684_100201924 533
50 3300047321 Ga0495676_0053126 Ga0495676_0053126_1009_2688 533
51 3300050507 nmdc:mga05p37_81_c1 nmdc:mga05p37_81_c1_2669_4315 533
52 3300050509 nmdc:mga0qj67_57345_c1 nmdc:mga0qj67_57345_c1_557_2203 533
53 3300050510 nmdc:mga06r32_17150_c1 nmdc:mga06r32_17150_c1_1909_3555 533
54 3300044712 Ga0453684_0048953 Ga0453684_0048953_991_2706 534
55 3300045051 Ga0451576_0012697 Ga0451576_0012697_4903_6618 534
56 3300005365 Ga0070688_100012411 Ga0070688_1000124114 535
57 3300005434 Ga0070709_10046644 Ga0070709_100466441 535
58 3300005468 Ga0070707_100042111 Ga0070707_1000421114 535
59 3300005545 Ga0070695_100027407 Ga0070695_1000274072 535
60 3300005617 Ga0068859_100004035 Ga0068859_10000403512 535
61 3300005617 Ga0068859_100065473 Ga0068859_1000654732 535
62 3300005618 Ga0068864_100003872 Ga0068864_1000038726 535
63 3300005719 Ga0068861_100043091 Ga0068861_1000430912 535
64 3300006847 Ga0075431_100132639 Ga0075431_1001326393 535
65 3300006852 Ga0075433_10002740 Ga0075433_100027404 535
66 3300006852 Ga0075433_10014512 Ga0075433_100145124 535
67 3300006852 Ga0075433_10090320 Ga0075433_100903203 535
68 3300006871 Ga0075434_100001496 Ga0075434_10000149610 535
69 3300006871 Ga0075434_100003448 Ga0075434_10000344812 535
70 3300006914 Ga0075436_100001436 Ga0075436_1000014363 535
71 3300006914 Ga0075436_100018436 Ga0075436_1000184364 535
72 3300006931 Ga0097620_100004035 Ga0097620_10000403512 535
73 3300006931 Ga0097620_100065475 Ga0097620_1000654752 535
74 3300007076 Ga0075435_100000112 Ga0075435_10000011226 535
75 3300009094 Ga0111539_10014602 Ga0111539_100146024 535
76 3300009147 Ga0114129_10018956 Ga0114129_100189562 535
77 3300014325 Ga0163163_10010896 Ga0163163_100108964 535
78 3300014968 Ga0157379_10003547 Ga0157379_100035479 535
79 3300025906 Ga0207699_10014042 Ga0207699_100140424 535
80 3300026035 Ga0207703_10001308 Ga0207703_1000130815 535
81 3300026089 Ga0207648_10080280 Ga0207648_100802803 535
82 3300026095 Ga0207676_10012204 Ga0207676_100122044 535
83 3300026118 Ga0207675_100008795 Ga0207675_1000087959 535
84 3300027907 Ga0207428_10004230 Ga0207428_100042304 535
85 3300038725 Ga0400484_39335 Ga0400484_39335_2222_3892 535
86 3300042876 Ga0451577_0011118 Ga0451577_0011118_4921_6600 535
87 3300042876 Ga0451577_0011361 Ga0451577_0011361_3634_5304 535
88 3300045051 Ga0451576_0008090 Ga0451576_0008090_9616_11295 535
89 3300045051 Ga0451576_0009153 Ga0451576_0009153_746_2416 535
90 3300046664 Ga0495659_0001197 Ga0495659_0001197_4625_6295 535
91 3300050511 nmdc:mga08y16_10275_c1 nmdc:mga08y16_10275_c1_3093_4772 535
92 3300050514 nmdc:mga08x19_13395_c1 nmdc:mga08x19_13395_c1_3170_4849 535
93 3300050514 nmdc:mga08x19_16141_c1 nmdc:mga08x19_16141_c1_1770_3449 535
94 3300050515 nmdc:mga0a205_46251_c1 nmdc:mga0a205_46251_c1_427_2106 535
95 3300050512 nmdc:mga0n895_232407_c1 nmdc:mga0n895_232407_c1_155_1837 537
96 3300028800 Ga0265338_10016601 Ga0265338_100166016 541
97 3300035086 Ga0373934_0003336 Ga0373934_0003336_1381_3117 545
98 3300046454 Ga0495592_0020093 Ga0495592_0020093_873_2609 545
99 3300046559 Ga0495667_0044283 Ga0495667_0044283_211_1947 545
100 3300046675 Ga0495657_0005457 Ga0495657_0005457_4329_6065 545
101 3300046678 Ga0495599_0005449 Ga0495599_0005449_2276_4012 545
102 3300047317 Ga0495604_0040994 Ga0495604_0040994_600_2336 545
103 3300047444 Ga0495675_0001206 Ga0495675_0001206_9930_11666 545
104 3300005545 Ga0070695_100003042 Ga0070695_1000030426 546
105 3300006880 Ga0075429_100048232 Ga0075429_1000482323 549
106 3300009094 Ga0111539_10121500 Ga0111539_101215002 555
107 3300025905 Ga0207685_10010224 Ga0207685_100102242 556
108 3300009177 Ga0105248_10056034 Ga0105248_100560342 557
109 3300014968 Ga0157379_10112207 Ga0157379_101122072 557
110 3300025941 Ga0207711_10027265 Ga0207711_100272652 557
111 3300006237 Ga0097621_100078479 Ga0097621_1000784793 559
112 3300006844 Ga0075428_100074960 Ga0075428_1000749603 559
113 3300046663 Ga0495635_0020596 Ga0495635_0020596_2717_4459 559
114 3300005340 Ga0070689_100003256 Ga0070689_1000032563 561
115 3300005365 Ga0070688_100011366 Ga0070688_1000113664 561
116 3300005459 Ga0068867_100076032 Ga0068867_1000760322 561
117 3300005617 Ga0068859_100147280 Ga0068859_1001472802 561
118 3300006846 Ga0075430_100020783 Ga0075430_1000207833 561
119 3300006880 Ga0075429_100070872 Ga0075429_1000708721 561
120 3300006880 Ga0075429_100138322 Ga0075429_1001383222 561
121 3300006931 Ga0097620_100147289 Ga0097620_1001472892 561
122 3300026089 Ga0207648_10032576 Ga0207648_100325764 561
123 3300050508 nmdc:mga09592_81815_c1 nmdc:mga09592_81815_c1_318_2048 561
124 3300050509 nmdc:mga0qj67_16496_c1 nmdc:mga0qj67_16496_c1_3338_5068 561
125 3300005340 Ga0070689_100000592 Ga0070689_10000059211 562
126 3300005340 Ga0070689_100001837 Ga0070689_10000183712 562
127 3300005343 Ga0070687_100000868 Ga0070687_1000008684 562
128 3300005365 Ga0070688_100004443 Ga0070688_1000044435 562
129 3300005365 Ga0070688_100017127 Ga0070688_1000171271 562
130 3300005438 Ga0070701_10003825 Ga0070701_100038254 562
131 3300005466 Ga0070685_10039643 Ga0070685_100396432 562
132 3300005549 Ga0070704_100028894 Ga0070704_1000288943 562
133 3300005618 Ga0068864_100100421 Ga0068864_1001004212 562
134 3300006880 Ga0075429_100000642 Ga0075429_10000064222 562
135 3300025918 Ga0207662_10000696 Ga0207662_100006968 562
136 3300025936 Ga0207670_10000065 Ga0207670_100000651 562
137 3300025936 Ga0207670_10001661 Ga0207670_1000166112 562
138 3300026095 Ga0207676_10081750 Ga0207676_100817502 562
139 3300042876 Ga0451577_0009758 Ga0451577_0009758_5087_6823 562
140 3300005331 Ga0070670_100010342 Ga0070670_1000103423 563
141 3300005471 Ga0070698_100031460 Ga0070698_1000314601 563
142 3300025925 Ga0207650_10011170 Ga0207650_100111704 563

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05746

DALR_1

DALR anticodon binding domain

457

576

0.96

PF03485

Arg_tRNA_synt_N

Arginyl tRNA synthetase N terminal domain

11

97

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3gdz-assembly4.cif.gz_D crystal structure of arginyl-trna synthetase from klebsiella pneumoniae subsp. pneumoniae 0.8628 1 95
3gdz-assembly4.cif.gz_D crystal structure of arginyl-trna synthetase from klebsiella pneumoniae subsp. pneumoniae 0.7573 1 95
3fnr-assembly1.cif.gz_A crystal structure of putative arginyl t-rna synthetase from campylobacter jejuni; 0.7499 91 555
3fnr-assembly1.cif.gz_A crystal structure of putative arginyl t-rna synthetase from campylobacter jejuni; 0.7467 91 555
1iq0-assembly1.cif.gz_A thermus thermophilus arginyl-trna synthetase 0.7124 1 555
ID Description Score Start End Superfamily
af_Q57689_448_566_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9578 439 555 1.10.730.10
af_Q57689_448_566_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9344 439 555 1.10.730.10
2zufA03 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.93 442 555 1.10.730.10
af_Q558Z0_468_589_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.9231 437 555 1.10.730.10
af_Q05506_483_607_1.10.730.10 Mainly Alpha;Orthogonal Bundle;Isoleucyl-tRNA Synthetase; Domain 1;Isoleucyl-tRNA Synthetase; Domain 1 0.8965 437 555 1.10.730.10
ID Description Score Start End GO Terms
AF-A0A2T4S5I8-F1-model_v4 arginine--tRNA ligase (EC 6.1.1.19) 0.9778 395 555 GO:0004814
GO:0005524
GO:0006420
AF-A0A661BC81-F1-model_v4 arginine--tRNA ligase (EC 6.1.1.19) 0.9742 408 555 GO:0004814
GO:0005524
GO:0006420
AF-A0A101HZ99-F1-model_v4 arginine--tRNA ligase (EC 6.1.1.19) 0.9703 331 555 GO:0004814
GO:0005524
GO:0006420
AF-A0A2T4S5I8-F1-model_v4 arginine--tRNA ligase (EC 6.1.1.19) 0.966 395 555 GO:0004814
GO:0005524
GO:0006420
AF-A0A2U1S4G8-F1-model_v4 arginine--tRNA ligase (EC 6.1.1.19) 0.9639 352 555 GO:0004814
GO:0005524
GO:0006420

Feature Viewer

pLDDT pTM Quality
87.99 0.82 High
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Predicted Structure (AlphaFold2)

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