F183462

General Info

Members Datasets Scaffolds Average Seq Length
141 116 282 320

Family's Representative Sequence

Representative Sequence 3300044658|Ga0466972_0008262|Ga0466972_0008262_2017_3087
Length 356
Sequence MTETTHANGRPPAVTVIGEALIDLVQLDAPGDYRARPGGSPFNVAVGLARLGHRTALMARLAGNTFGRMLRVHAATEGIDLTYAPAAAEPTTLAVVSMDREGRASYDFYLDGTADWQWTPAESALVPDDTAVLHFGSVASWTPPGSEHIHTAAARLRARGTTLISYDPNIRPALLGDPARGRQAVEGSVGVAHIVKASREDVEWLYPDTSLERIAARWLELGALLVVVTDGPDGAHVFHASTGSFSRPGRKVAVVDTVGAGDAFTAGLLGALLRRDLHTPRALAAAGPSVLAAAVDDAVLVSALTCERLGADPPTALPRPHQPADAPLTATDLTFGDVTGRAPEGRRTPEAVPGGR

Samples

Sample ID Description Type Environment
1 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
2 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
3 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
24 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
25 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
26 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
27 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
31 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
32 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
35 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
36 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
37 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
38 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
61 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
62 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
63 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
64 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
65 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
66 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
67 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
68 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
69 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
70 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
71 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
72 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
73 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
74 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
75 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
76 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
77 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
78 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
79 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
80 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
81 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
82 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
83 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
84 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
85 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
86 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
87 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
88 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
89 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
90 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
92 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
93 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
94 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
95 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
96 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
97 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
98 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
99 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
100 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
101 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
102 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
103 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
104 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
105 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
106 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
107 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
108 2582581314 Streptomyces mirabilis YR139 Isolate Rhizosphere
109 2643221961 Aeromicrobium sp. Root236 Isolate Unclassified
110 2643221962 Aeromicrobium sp. Root344 Isolate Unclassified
111 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
112 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
113 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
114 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
115 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
116 8056829672 Streptomyces barringtoniae JA03 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 93.62
Metatranscriptomes 0
Isolates 6.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.06
Nodule 0
Rhizoplane 2.84
Rhizosphere 80.14
Stem 0
Stem Tuber 0
Unclassified 1.42

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466972_0008262 3300044658 Bacteria 5216
2 JGI25164J39214_1000186 3300002772 Bacteria 54746
3 JGI25165J46597_1000055 3300003214 Bacteria 224187
4 Ga0070658_10096210 3300005327 Bacteria 2444
5 Ga0070691_10014594 3300005341 Bacteria 3606
6 Ga0070667_100025253 3300005367 Bacteria 4939
7 Ga0070714_100198438 3300005435 Bacteria 1835
8 Ga0070713_100105321 3300005436 Bacteria 2450
9 Ga0070713_100468006 3300005436 Bacteria 1186
10 Ga0070708_100034065 3300005445 Bacteria 4429
11 Ga0070662_100026846 3300005457 Bacteria 3991
12 Ga0070706_100071645 3300005467 Bacteria 3206
13 Ga0070698_100084989 3300005471 Bacteria 3152
14 Ga0070699_100050540 3300005518 Bacteria 3599
15 Ga0070696_100243085 3300005546 Bacteria 1359
16 Ga0070665_100149875 3300005548 Bacteria 2335
17 Ga0068854_100184198 3300005578 Bacteria 1633
18 Ga0068856_100076343 3300005614 Bacteria 3320
19 Ga0068852_100000889 3300005616 Bacteria 19775
20 Ga0068861_100000238 3300005719 Bacteria 30220
21 Ga0068858_100000648 3300005842 Bacteria 36262
22 Ga0081538_10002603 3300005981 Bacteria 17492
23 Ga0081539_10000999 3300005985 Bacteria 52497
24 Ga0070717_10290720 3300006028 Bacteria 1451
25 Ga0105245_10005848 3300009098 Bacteria 10801
26 Ga0105247_10024581 3300009101 Bacteria 3631
27 Ga0105248_10000104 3300009177 Bacteria 94431
28 Ga0105237_10018488 3300009545 Bacteria 7213
29 Ga0105238_10003164 3300009551 Bacteria 16410
30 Ga0105249_10001216 3300009553 Bacteria 22699
31 Ga0105239_10013291 3300010375 Bacteria 9148
32 Ga0105239_10087757 3300010375 Bacteria 3429
33 Ga0105239_10098105 3300010375 Bacteria 3238
34 Ga0105239_10148948 3300010375 Bacteria 2611
35 Ga0157369_10039491 3300013105 Bacteria 5157
36 Ga0157369_10042065 3300013105 Bacteria 4985
37 Ga0163162_10012297 3300013306 Bacteria 8355
38 Ga0163163_10618399 3300014325 Bacteria 1147
39 Ga0157376_10069124 3300014969 Bacteria 2993
40 Ga0207427_100054 3300025231 Bacteria 216315
41 Ga0209437_100339 3300025233 Bacteria 56482
42 Ga0209233_1000001 3300025261 Bacteria 2992747
43 Ga0207710_10072948 3300025900 Unclassified 1577
44 Ga0207710_10079696 3300025900 Bacteria 1517
45 Ga0207647_10033434 3300025904 Bacteria 3293
46 Ga0207705_10362058 3300025909 Bacteria 1118
47 Ga0207684_10006013 3300025910 Bacteria 11104
48 Ga0207671_10033251 3300025914 Bacteria 3836
49 Ga0207694_10000222 3300025924 Bacteria 55592
50 Ga0207687_10128544 3300025927 Bacteria 1906
51 Ga0207700_10058222 3300025928 Bacteria 2918
52 Ga0207664_10231002 3300025929 Bacteria 1608
53 Ga0207706_10004515 3300025933 Bacteria 13072
54 Ga0207711_10000130 3300025941 Bacteria 79182
55 Ga0207661_10091801 3300025944 Bacteria 2531
56 Ga0207712_10010213 3300025961 Bacteria 5953
57 Ga0207668_10025440 3300025972 Bacteria 3831
58 Ga0207640_10018789 3300025981 Bacteria 4069
59 Ga0207658_10005558 3300025986 Bacteria 8628
60 Ga0207703_10000238 3300026035 Bacteria 62524
61 Ga0207708_10010124 3300026075 Bacteria 7000
62 Ga0207702_10063861 3300026078 Bacteria 3150
63 Ga0207675_100125140 3300026118 Bacteria 2435
64 Ga0207698_10000930 3300026142 Bacteria 17031
65 Ga0268266_10498887 3300028379 Bacteria 1162
66 Ga0307517_10003786 3300028786 Bacteria 23507
67 Ga0307514_10116288 3300031649 Bacteria 1879
68 Ga0307518_10039057 3300031838 Bacteria 3451
69 Ga0395899_0085902 3300037312 Bacteria 2286
70 Ga0395900_0028569 3300037418 Bacteria 5715
71 Ga0395900_0041050 3300037418 Bacteria 4771
72 Ga0395900_0115096 3300037418 Bacteria 2760
73 Ga0395898_0004827 3300037466 Bacteria 14666
74 Ga0395898_0005170 3300037466 Bacteria 14117
75 Ga0395898_0026540 3300037466 Bacteria 5826
76 Ga0395905_0005356 3300037471 Bacteria 13110
77 Ga0395901_0001195 3300038443 Bacteria 27615
78 Ga0395901_0005230 3300038443 Bacteria 13099
79 Ga0395901_0083576 3300038443 Bacteria 3337
80 Ga0466969_0003835 3300044656 Bacteria 7980
81 Ga0466972_0069852 3300044658 Bacteria 1676
82 Ga0466965_0000151 3300044683 Bacteria 20572
83 Ga0466966_0000700 3300044684 Bacteria 21325
84 Ga0466966_0002281 3300044684 Bacteria 12496
85 Ga0466961_0000641 3300044693 Bacteria 21975
86 Ga0466961_0012893 3300044693 Bacteria 5347
87 Ga0466963_0000385 3300044694 Bacteria 20153
88 Ga0466963_0009454 3300044694 Bacteria 5871
89 Ga0466963_0168354 3300044694 Bacteria 1527
90 Ga0466964_0006159 3300044706 Bacteria 4469
91 Ga0466971_0000447 3300044719 Bacteria 16147
92 Ga0466971_0052528 3300044719 Bacteria 1835
93 Ga0466970_0000892 3300044765 Bacteria 14403
94 Ga0466957_0000167 3300044842 Bacteria 29271
95 Ga0466959_0001184 3300045049 Bacteria 15728
96 Ga0466959_0021891 3300045049 Bacteria 4721
97 Ga0466959_0057963 3300045049 Bacteria 2822
98 Ga0466958_0005539 3300045836 Bacteria 6806
99 Ga0466958_0250406 3300045836 Bacteria 1133
100 Ga0466967_0009048 3300045976 Bacteria 7361
101 Ga0466967_0016800 3300045976 Bacteria 5784
102 Ga0466967_0032446 3300045976 Bacteria 4410
103 Ga0495590_0000162 3300046457 Bacteria 39932
104 Ga0495629_0039879 3300046459 Bacteria 3305
105 Ga0495643_0008607 3300046522 Bacteria 6442
106 Ga0495687_018816 3300047443 Bacteria 3404
107 Ga0495681_0010236 3300047470 Bacteria 5690
108 Ga0496104_0114876 3300048907 Bacteria 2583
109 Ga0496110_0026036 3300048913 Bacteria 5002
110 Ga0496112_0501190 3300048915 Bacteria 1150
111 Ga0496114_0261104 3300048917 Unclassified 1525
112 Ga0496126_0344034 3300048929 Bacteria 1221
113 Ga0501034_0022615 3300049571 Bacteria 6404
114 Ga0501034_0580894 3300049571 Bacteria 1027
115 Ga0501038_0263311 3300049574 Bacteria 1362
116 Ga0501067_0049288 3300049583 Bacteria 2334
117 Ga0501073_0048970 3300049589 Bacteria 2964
118 Ga0501044_0119245 3300049823 Bacteria 2641
119 Ga0500610_0127197 3300053079 Bacteria 1299
120 Ga0500651_0000316 3300053093 Bacteria 27636
121 Ga0500654_016151 3300053099 Bacteria 4910
122 Ga0500560_001319 3300053107 Bacteria 4230
123 Ga0500569_020694 3300053109 Bacteria 1730
124 Ga0500614_002979 3300053123 Bacteria 3699
125 Ga0500573_0117388 3300053140 Bacteria 1484
126 Ga0500588_0008632 3300053146 Bacteria 2390
127 Ga0500600_0009202 3300053149 Bacteria 5958
128 Ga0500616_0006426 3300053153 Bacteria 7697
129 Ga0500634_0024914 3300053161 Bacteria 3255
130 Ga0500587_000759 3300053739 Bacteria 4168
131 Ga0466962_0003732 3300061719 Bacteria 7266
132 Ga0466962_0024647 3300061719 Bacteria 2888
133 2585317115 2582581314 Bacteria 11452267
134 2645720322 2643221961 Bacteria 3919167
135 2645723262 2643221962 Bacteria 3874254
136 2723640984 2721755702 Bacteria 4373124
137 2795795366 2795385472 Bacteria 6627535
138 2852678381 2852677369 Bacteria 3768884
139 2877682890 2877676314 Bacteria 9512378
140 2946083845 2946080515 Bacteria 4310960
141 8056832941 8056829672 Bacteria 9045328
142 Ga0466972_0008262
143 JGI25164J39214_1000186
144 JGI25165J46597_1000055
145 Ga0070658_10096210
146 Ga0070691_10014594
147 Ga0070667_100025253
148 Ga0070714_100198438
149 Ga0070713_100105321
150 Ga0070713_100468006
151 Ga0070708_100034065
152 Ga0070662_100026846
153 Ga0070706_100071645
154 Ga0070698_100084989
155 Ga0070699_100050540
156 Ga0070696_100243085
157 Ga0070665_100149875
158 Ga0068854_100184198
159 Ga0068856_100076343
160 Ga0068852_100000889
161 Ga0068861_100000238
162 Ga0068858_100000648
163 Ga0081538_10002603
164 Ga0081539_10000999
165 Ga0070717_10290720
166 Ga0105245_10005848
167 Ga0105247_10024581
168 Ga0105248_10000104
169 Ga0105237_10018488
170 Ga0105238_10003164
171 Ga0105249_10001216
172 Ga0105239_10013291
173 Ga0105239_10087757
174 Ga0105239_10098105
175 Ga0105239_10148948
176 Ga0157369_10039491
177 Ga0157369_10042065
178 Ga0163162_10012297
179 Ga0163163_10618399
180 Ga0157376_10069124
181 Ga0207427_100054
182 Ga0209437_100339
183 Ga0209233_1000001
184 Ga0207710_10072948
185 Ga0207710_10079696
186 Ga0207647_10033434
187 Ga0207705_10362058
188 Ga0207684_10006013
189 Ga0207671_10033251
190 Ga0207694_10000222
191 Ga0207687_10128544
192 Ga0207700_10058222
193 Ga0207664_10231002
194 Ga0207706_10004515
195 Ga0207711_10000130
196 Ga0207661_10091801
197 Ga0207712_10010213
198 Ga0207668_10025440
199 Ga0207640_10018789
200 Ga0207658_10005558
201 Ga0207703_10000238
202 Ga0207708_10010124
203 Ga0207702_10063861
204 Ga0207675_100125140
205 Ga0207698_10000930
206 Ga0268266_10498887
207 Ga0307517_10003786
208 Ga0307514_10116288
209 Ga0307518_10039057
210 Ga0395899_0085902
211 Ga0395900_0028569
212 Ga0395900_0041050
213 Ga0395900_0115096
214 Ga0395898_0004827
215 Ga0395898_0005170
216 Ga0395898_0026540
217 Ga0395905_0005356
218 Ga0395901_0001195
219 Ga0395901_0005230
220 Ga0395901_0083576
221 Ga0466969_0003835
222 Ga0466972_0069852
223 Ga0466965_0000151
224 Ga0466966_0000700
225 Ga0466966_0002281
226 Ga0466961_0000641
227 Ga0466961_0012893
228 Ga0466963_0000385
229 Ga0466963_0009454
230 Ga0466963_0168354
231 Ga0466964_0006159
232 Ga0466971_0000447
233 Ga0466971_0052528
234 Ga0466970_0000892
235 Ga0466957_0000167
236 Ga0466959_0001184
237 Ga0466959_0021891
238 Ga0466959_0057963
239 Ga0466958_0005539
240 Ga0466958_0250406
241 Ga0466967_0009048
242 Ga0466967_0016800
243 Ga0466967_0032446
244 Ga0495590_0000162
245 Ga0495629_0039879
246 Ga0495643_0008607
247 Ga0495687_018816
248 Ga0495681_0010236
249 Ga0496104_0114876
250 Ga0496110_0026036
251 Ga0496112_0501190
252 Ga0496114_0261104
253 Ga0496126_0344034
254 Ga0501034_0022615
255 Ga0501034_0580894
256 Ga0501038_0263311
257 Ga0501067_0049288
258 Ga0501073_0048970
259 Ga0501044_0119245
260 Ga0500610_0127197
261 Ga0500651_0000316
262 Ga0500654_016151
263 Ga0500560_001319
264 Ga0500569_020694
265 Ga0500614_002979
266 Ga0500573_0117388
267 Ga0500588_0008632
268 Ga0500600_0009202
269 Ga0500616_0006426
270 Ga0500634_0024914
271 Ga0500587_000759
272 Ga0466962_0003732
273 Ga0466962_0024647
274 2585317115
275 2645720322
276 2645723262
277 2723640984
278 2795795366
279 2852678381
280 2877682890
281 2946083845
282 8056832941

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00294

PfkB

pfkB family carbohydrate kinase

12

317

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7fca-assembly1.cif.gz_E pfkb(mycobacterium marinum) 0.9359 3 290
7cf8-assembly1.cif.gz_E pfkb(mycobacterium marinum) 0.9345 3 290
7cf8-assembly1.cif.gz_B pfkb(mycobacterium marinum) 0.9335 5 286
7fca-assembly1.cif.gz_E pfkb(mycobacterium marinum) 0.9326 3 290
7fca-assembly1.cif.gz_A pfkb(mycobacterium marinum) 0.9316 3 290
ID Description Score Start End Superfamily
4u7xA00 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.9137 2 298 3.40.1190.20
af_Q9SX54_1_210_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8953 113 297 3.40.1190.20
4u7xA00 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8908 2 298 3.40.1190.20
af_A0A1D6N511_4_284_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8673 2 256 3.40.1190.20
af_C6TGN8_61_381_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8565 4 297 3.40.1190.20
ID Description Score Start End GO Terms
AF-A1SCS6-F1-model_v4 PfkB domain protein 0.9669 2 297 GO:0016301
AF-A0A2P8B2N3-F1-model_v4 Fructokinase (EC 2.7.1.4) 0.9616 1 298 GO:0008865
AF-A0A1X7KJY4-F1-model_v4 Fructokinase 0.9602 3 297 GO:0016301
AF-A0A4S4ZJH7-F1-model_v4 Carbohydrate kinase 0.96 3 297 GO:0016301
AF-A0A5B8C7R5-F1-model_v4 Carbohydrate kinase 0.9597 2 297 GO:0016301

Map