F182154

General Info

Members Datasets Scaffolds Average Seq Length
141 99 282 456

Family's Representative Sequence

Representative Sequence 3300005983|Ga0081540_1023625|Ga0081540_10236253
Length 476
Sequence MPRVGSWRCKGDFMPERHNSMTATALETYDPRTFRARTFYDAAPRFRDGTDTPRAYLERCLETIAACEPVVQAFAALNEAGARAAADASTARWQAGQPLSAIDGLPIGIKDLLETRDMPTQMGCAAYSDNFPKRDNAAVWALRQAGAVILGKTVSAELGGSQPGPTRNPFDPARTPGMLPAAIGTQVGGSIIRPAGFCGNVALKPTQGGINRGERQATSMSTHGVHAGCIEDMWQVAIEVARRVGGDRGCAGLFGPPTPPAAVPPTRLMVLETEGWAVLDDLSKAGFAQLLESLQRAGITLLRRNAHPWIEALEKAIGNAGAVCNAITGWENRWALRNLVDEHPDGVSQRAKHTLARAEAMSPEDYRAALLEREAAQLCYARLAPLADAVLTLSCPGPAPFWPGDVPGEPLAPHPTGNAVFNYPSSMLFAPAVTVPLMSVSGMPVGVQLMGQQHDDARITAMARWLLETVPPVVVR

Samples

Sample ID Description Type Environment
1 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
2 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
3 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
4 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
5 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
6 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
12 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
13 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
14 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
32 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
33 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
34 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
35 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
36 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
37 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
38 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
50 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
51 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
53 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
54 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
55 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
56 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
57 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
58 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
59 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
60 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
61 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
62 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
63 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
64 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
65 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
66 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
67 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
68 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
69 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
70 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
71 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
72 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
73 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
74 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
77 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
78 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
79 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
80 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
81 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
82 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
83 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
84 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
85 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
86 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
87 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
88 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
89 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
90 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
91 3300053155 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 endosphere Metagenome Endosphere
92 3300053733 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 endosphere Metagenome Endosphere
93 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
94 2842775625 Roseomonas sp. R-71825 Isolate Unclassified
95 2883577096 Roseococcus sp. SYP-B2431 Isolate Rhizosphere
96 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
97 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
98 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
99 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.62
Metatranscriptomes 0
Isolates 6.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.55
Nodule 0
Rhizoplane 3.55
Rhizosphere 87.94
Stem 0
Stem Tuber 0
Unclassified 0.71

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081540_1023625 3300005983 Bacteria 3590
2 Ga0070680_100011264 3300005336 Bacteria 6915
3 Ga0070669_100141596 3300005353 Bacteria 1854
4 Ga0070700_100082777 3300005441 Bacteria 2076
5 Ga0070708_100011762 3300005445 Bacteria 7120
6 Ga0070708_100200177 3300005445 Bacteria 1870
7 Ga0070681_10001412 3300005458 Bacteria 21080
8 Ga0070681_10186517 3300005458 Bacteria 1994
9 Ga0070706_100020341 3300005467 Bacteria 6116
10 Ga0070706_100033477 3300005467 Bacteria 4743
11 Ga0070707_100037510 3300005468 Bacteria 4626
12 Ga0070707_100123748 3300005468 Bacteria 2512
13 Ga0070698_100000825 3300005471 Bacteria 33892
14 Ga0070698_100036484 3300005471 Bacteria 5077
15 Ga0070698_100098307 3300005471 Bacteria 2901
16 Ga0070699_100038185 3300005518 Bacteria 4158
17 Ga0070679_100034934 3300005530 Bacteria 4985
18 Ga0070695_100006079 3300005545 Bacteria 7135
19 Ga0070665_100010063 3300005548 Bacteria 9570
20 Ga0070704_100032447 3300005549 Bacteria 3523
21 Ga0068855_100164450 3300005563 Bacteria 2516
22 Ga0068857_100023090 3300005577 Bacteria 5471
23 Ga0068852_100019683 3300005616 Bacteria 5349
24 Ga0068859_100210956 3300005617 Bacteria 2028
25 Ga0068861_100044195 3300005719 Bacteria 3348
26 Ga0068861_100104914 3300005719 Bacteria 2256
27 Ga0068858_100127282 3300005842 Unclassified 2386
28 Ga0081455_10000087 3300005937 Bacteria 99627
29 Ga0081455_10001642 3300005937 Bacteria 27218
30 Ga0081455_10002517 3300005937 Bacteria 21758
31 Ga0081540_1011559 3300005983 Bacteria 5896
32 Ga0081539_10001371 3300005985 Bacteria 42242
33 Ga0081539_10012883 3300005985 Bacteria 6370
34 Ga0075366_10006926 3300006195 Bacteria 6239
35 Ga0075428_100062640 3300006844 Bacteria 4071
36 Ga0075428_100160779 3300006844 Bacteria 2438
37 Ga0075428_100231032 3300006844 Bacteria 1996
38 Ga0075428_100237376 3300006844 Bacteria 1967
39 Ga0075431_100012022 3300006847 Bacteria 8735
40 Ga0075431_100029062 3300006847 Bacteria 5687
41 Ga0075429_100001504 3300006880 Bacteria 19173
42 Ga0097620_100210967 3300006931 Bacteria 2028
43 Ga0105240_10039610 3300009093 Bacteria 6032
44 Ga0111539_10067924 3300009094 Bacteria 4208
45 Ga0111539_10165685 3300009094 Bacteria 2584
46 Ga0111539_10311643 3300009094 Bacteria 1832
47 Ga0114129_10000870 3300009147 Bacteria 39303
48 Ga0114129_10110529 3300009147 Bacteria 3793
49 Ga0114129_10334005 3300009147 Bacteria 2011
50 Ga0105238_10028536 3300009551 Bacteria 5685
51 Ga0105238_10335776 3300009551 Bacteria 1499
52 Ga0157370_10002414 3300013104 Bacteria 22522
53 Ga0157369_10233404 3300013105 Bacteria 1923
54 Ga0157378_10112374 3300013297 Bacteria 2499
55 Ga0157380_10176046 3300014326 Bacteria 1875
56 Ga0213872_10060488 3300021361 Bacteria 1713
57 Ga0207426_1013091 3300025302 Bacteria 3088
58 Ga0207684_10009672 3300025910 Bacteria 8501
59 Ga0207684_10114998 3300025910 Bacteria 2304
60 Ga0207707_10005413 3300025912 Bacteria 11161
61 Ga0207660_10015597 3300025917 Bacteria 5017
62 Ga0207657_10097270 3300025919 Bacteria 2448
63 Ga0207652_10024285 3300025921 Bacteria 5028
64 Ga0207646_10021771 3300025922 Bacteria 5916
65 Ga0207646_10025692 3300025922 Bacteria 5385
66 Ga0207694_10033154 3300025924 Bacteria 3956
67 Ga0207691_10082256 3300025940 Bacteria 2893
68 Ga0207703_10129286 3300026035 Bacteria 2179
69 Ga0207708_10014205 3300026075 Bacteria 5954
70 Ga0207675_100064708 3300026118 Bacteria 3418
71 Ga0209971_1004475 3300027682 Bacteria 3318
72 Ga0207428_10016069 3300027907 Bacteria 6450
73 Ga0207428_10080377 3300027907 Bacteria 2547
74 Ga0268266_10005090 3300028379 Bacteria 12395
75 Ga0265334_10038467 3300028573 Bacteria 1882
76 Ga0373941_0008868 3300035115 Bacteria 2517
77 Ga0373931_0013838 3300035691 Bacteria 3935
78 Ga0373947_0066592 3300035725 Bacteria 2199
79 Ga0395899_0015641 3300037312 Bacteria 5786
80 Ga0395900_0247222 3300037418 Bacteria 1786
81 Ga0395898_0048367 3300037466 Bacteria 4171
82 Ga0436365_0173723 3300039437 Bacteria 2490
83 Ga0436365_0521090 3300039437 Bacteria 2855
84 Ga0436361_0888239 3300039447 Bacteria 6345
85 Ga0466972_0002213 3300044658 Bacteria 9547
86 Ga0466965_0001237 3300044683 Bacteria 10109
87 Ga0466970_0033684 3300044765 Bacteria 2708
88 Ga0466957_0057638 3300044842 Bacteria 2378
89 Ga0466960_0000658 3300044901 Bacteria 11981
90 Ga0466959_0026874 3300045049 Bacteria 4269
91 Ga0451576_0015208 3300045051 Bacteria 8535
92 Ga0451576_0079857 3300045051 Bacteria 3404
93 Ga0466967_0049223 3300045976 Bacteria 3684
94 Ga0466967_0069673 3300045976 Bacteria 3144
95 Ga0496102_0334252 3300048905 Bacteria 1427
96 Ga0496104_0137913 3300048907 Bacteria 2344
97 Ga0496105_0034294 3300048908 Bacteria 4173
98 Ga0496110_0041157 3300048913 Bacteria 4031
99 Ga0496111_0063121 3300048914 Bacteria 2687
100 Ga0501034_0001551 3300049571 Bacteria 30141
101 Ga0501034_0010209 3300049571 Bacteria 9795
102 Ga0501038_0203861 3300049574 Bacteria 1586
103 Ga0501071_0109680 3300049587 Bacteria 2039
104 Ga0501072_0006080 3300049588 Bacteria 9213
105 Ga0501072_0123651 3300049588 Bacteria 2061
106 Ga0501075_0018382 3300049591 Bacteria 5060
107 Ga0501075_0086717 3300049591 Bacteria 2372
108 Ga0501075_0103904 3300049591 Bacteria 2159
109 Ga0501076_0105388 3300049592 Bacteria 2275
110 Ga0501079_0074570 3300049741 Bacteria 2623
111 Ga0501081_0143629 3300049743 Bacteria 1711
112 Ga0501044_0027504 3300049823 Bacteria 6009
113 nmdc:mga05p37_339178_c1 3300050507 Bacteria 1773
114 nmdc:mga05p37_4963_c1 3300050507 Bacteria 15588
115 nmdc:mga05p37_92399_c1 3300050507 Bacteria 3728
116 nmdc:mga09592_2339_c1 3300050508 Bacteria 15293
117 nmdc:mga0qj67_19868_c1 3300050509 Bacteria 5139
118 nmdc:mga0qj67_79426_c1 3300050509 Bacteria 2628
119 nmdc:mga06r32_13720_c1 3300050510 Bacteria 7348
120 nmdc:mga06r32_164632_c1 3300050510 Bacteria 2200
121 nmdc:mga06r32_2080_c1 3300050510 Bacteria 17909
122 nmdc:mga08y16_103148_c1 3300050511 Bacteria 2969
123 nmdc:mga08y16_36142_c1 3300050511 Bacteria 5188
124 nmdc:mga08y16_51363_c1 3300050511 Bacteria 4314
125 nmdc:mga08y16_88395_c1 3300050511 Bacteria 3229
126 nmdc:mga0rr50_21208_c1 3300050513 Bacteria 4431
127 nmdc:mga0a205_90740_c1 3300050515 Bacteria 2952
128 Ga0500616_0004096 3300053153 Bacteria 10586
129 Ga0500620_016068 3300053155 Bacteria 2131
130 Ga0500552_000329 3300053733 Bacteria 4364
131 Ga0530510_0000315 3300061734 Bacteria 31029
132 Ga0530510_0121546 3300061734 Bacteria 1917
133 2842776662 2842775625 Bacteria 5587290
134 2883579887 2883577096 Bacteria 4709178
135 2889306191 2889306138 Bacteria 6358934
136 2894773439 2894772417 Bacteria 5305674
137 2894775398 2894772417 Bacteria 5305674
138 2929203070 2929199973 Bacteria 7260745
139 2929205348 2929199973 Bacteria 7260745
140 8055912784 8055909800 Bacteria 7278581
141 8055914214 8055909800 Bacteria 7278581
142 Ga0081540_1023625
143 Ga0070680_100011264
144 Ga0070669_100141596
145 Ga0070700_100082777
146 Ga0070708_100011762
147 Ga0070708_100200177
148 Ga0070681_10001412
149 Ga0070681_10186517
150 Ga0070706_100020341
151 Ga0070706_100033477
152 Ga0070707_100037510
153 Ga0070707_100123748
154 Ga0070698_100000825
155 Ga0070698_100036484
156 Ga0070698_100098307
157 Ga0070699_100038185
158 Ga0070679_100034934
159 Ga0070695_100006079
160 Ga0070665_100010063
161 Ga0070704_100032447
162 Ga0068855_100164450
163 Ga0068857_100023090
164 Ga0068852_100019683
165 Ga0068859_100210956
166 Ga0068861_100044195
167 Ga0068861_100104914
168 Ga0068858_100127282
169 Ga0081455_10000087
170 Ga0081455_10001642
171 Ga0081455_10002517
172 Ga0081540_1011559
173 Ga0081539_10001371
174 Ga0081539_10012883
175 Ga0075366_10006926
176 Ga0075428_100062640
177 Ga0075428_100160779
178 Ga0075428_100231032
179 Ga0075428_100237376
180 Ga0075431_100012022
181 Ga0075431_100029062
182 Ga0075429_100001504
183 Ga0097620_100210967
184 Ga0105240_10039610
185 Ga0111539_10067924
186 Ga0111539_10165685
187 Ga0111539_10311643
188 Ga0114129_10000870
189 Ga0114129_10110529
190 Ga0114129_10334005
191 Ga0105238_10028536
192 Ga0105238_10335776
193 Ga0157370_10002414
194 Ga0157369_10233404
195 Ga0157378_10112374
196 Ga0157380_10176046
197 Ga0213872_10060488
198 Ga0207426_1013091
199 Ga0207684_10009672
200 Ga0207684_10114998
201 Ga0207707_10005413
202 Ga0207660_10015597
203 Ga0207657_10097270
204 Ga0207652_10024285
205 Ga0207646_10021771
206 Ga0207646_10025692
207 Ga0207694_10033154
208 Ga0207691_10082256
209 Ga0207703_10129286
210 Ga0207708_10014205
211 Ga0207675_100064708
212 Ga0209971_1004475
213 Ga0207428_10016069
214 Ga0207428_10080377
215 Ga0268266_10005090
216 Ga0265334_10038467
217 Ga0373941_0008868
218 Ga0373931_0013838
219 Ga0373947_0066592
220 Ga0395899_0015641
221 Ga0395900_0247222
222 Ga0395898_0048367
223 Ga0436365_0173723
224 Ga0436365_0521090
225 Ga0436361_0888239
226 Ga0466972_0002213
227 Ga0466965_0001237
228 Ga0466970_0033684
229 Ga0466957_0057638
230 Ga0466960_0000658
231 Ga0466959_0026874
232 Ga0451576_0015208
233 Ga0451576_0079857
234 Ga0466967_0049223
235 Ga0466967_0069673
236 Ga0496102_0334252
237 Ga0496104_0137913
238 Ga0496105_0034294
239 Ga0496110_0041157
240 Ga0496111_0063121
241 Ga0501034_0001551
242 Ga0501034_0010209
243 Ga0501038_0203861
244 Ga0501071_0109680
245 Ga0501072_0006080
246 Ga0501072_0123651
247 Ga0501075_0018382
248 Ga0501075_0086717
249 Ga0501075_0103904
250 Ga0501076_0105388
251 Ga0501079_0074570
252 Ga0501081_0143629
253 Ga0501044_0027504
254 nmdc:mga05p37_339178_c1
255 nmdc:mga05p37_4963_c1
256 nmdc:mga05p37_92399_c1
257 nmdc:mga09592_2339_c1
258 nmdc:mga0qj67_19868_c1
259 nmdc:mga0qj67_79426_c1
260 nmdc:mga06r32_13720_c1
261 nmdc:mga06r32_164632_c1
262 nmdc:mga06r32_2080_c1
263 nmdc:mga08y16_103148_c1
264 nmdc:mga08y16_36142_c1
265 nmdc:mga08y16_51363_c1
266 nmdc:mga08y16_88395_c1
267 nmdc:mga0rr50_21208_c1
268 nmdc:mga0a205_90740_c1
269 Ga0500616_0004096
270 Ga0500620_016068
271 Ga0500552_000329
272 Ga0530510_0000315
273 Ga0530510_0121546
274 2842776662
275 2883579887
276 2889306191
277 2894773439
278 2894775398
279 2929203070
280 2929205348
281 8055912784
282 8055914214

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01425

Amidase

Amidase

55

460

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
1o9n-assembly1.cif.gz_B crystal structure of the k62a mutant of malonamidase e2 from bradyrhizobium japonicum 0.8989 17 447
1o9n-assembly1.cif.gz_B crystal structure of the k62a mutant of malonamidase e2 from bradyrhizobium japonicum 0.8926 17 447
1obl-assembly1.cif.gz_B crystal structure of the s133a mutant of malonamidase e2 complexed with malonate from bradyrhizobium japonicum 0.8901 17 447
1obi-assembly1.cif.gz_B crystal structure of the g130a mutant of malonamidase e2 from bradyrhizobium japonicum 0.8893 17 447
1ocl-assembly1.cif.gz_A the crystal structure of malonamidase e2 complexed with malonate from bradyrhizobium japonicum 0.8842 17 447
ID Description Score Start End Superfamily
1o9qA00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8797 17 450 3.90.1300.10
1o9qA00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8777 17 450 3.90.1300.10
2dqnA00 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8767 17 446 3.90.1300.10
af_P9WQ93_21_468_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8744 21 447 3.90.1300.10
af_Q9LI77_43_527_3.90.1300.10 Alpha Beta;Alpha-Beta Complex;Amidase signature (AS) enzymes;Amidase signature (AS) domain 0.8627 18 450 3.90.1300.10
ID Description Score Start End GO Terms
AF-A0A7X2KC61-F1-model_v4 Amidase 0.9738 9 449 GO:0003824
AF-A0A7S0PLZ6-F1-model_v4 Amidase domain-containing protein 0.9694 24 136 GO:0050567
AF-A0A2E7I4E8-F1-model_v4 Amidase 0.9692 17 330 GO:0003824
AF-A0A2D6G1S8-F1-model_v4 Amidase 0.9659 5 450 GO:0003824
AF-A0A528KMQ6-F1-model_v4 Amidase 0.9651 18 152 GO:0003824

Map