F179516

General Info

Members Datasets Scaffolds Average Seq Length
140 100 280 240

Family's Representative Sequence

Representative Sequence 3300010375|Ga0105239_10763502|Ga0105239_107635022
Length 239
Sequence MKLPVIHGYIDRRILVNFTVDPEAVQSLLPSPFRPKIYKGKAIAGICLIRLKHIKPKGWPDFTGISSENGAHRIAVEWEENGVTKEGVYIPRRDTSSRLNALAGGRLFPGKHHLADFNVKEIAGHFHIDFTSSDKTSISIDARSASEFPATSVFETLENASAFFEGGAVGYSPNNQQSLDGLKLQTYQWKVSPLQLIQVASSFFENTAVFKKGSVAFDNALLMTRTEHEWHTLTGCPQP

Samples

Sample ID Description Type Environment
1 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
5 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
6 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
16 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
20 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
23 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
24 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
25 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
26 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
30 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
31 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
32 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
33 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
36 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
37 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
38 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
41 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
42 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
43 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
44 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
45 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
61 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
62 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
63 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
64 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
65 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
66 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
67 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
68 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
69 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
70 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
71 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
72 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
73 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
74 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
75 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
76 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
77 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
78 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
79 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
80 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
81 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
82 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
83 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
84 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
85 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
86 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
87 2738541273 Elizabethkingia sp. YR214 Isolate Unclassified
88 2738541283 Pedobacter sp. OK701 Isolate Unclassified
89 2738543014 Elizabethkingia sp. YR191 Isolate Unclassified
90 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
91 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
92 2881247448 Flavobacterium beibuense RSKm HC5 Isolate Rhizosphere
93 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
94 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
95 2914759650 Rhizosphaericola mali Isolate Rhizosphere
96 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
97 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
98 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
99 2945977869 Chitinophaga sp. W2I13 Isolate Rhizosphere
100 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.86
Metatranscriptomes 0
Isolates 12.14

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10
Nodule 0.71
Rhizoplane 0.71
Rhizosphere 78.57
Stem 0
Stem Tuber 0
Unclassified 7.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105239_10763502 3300010375 Bacteria 1107
2 rootH2_10006910 3300003320 Bacteria 14945
3 rootL2_10353171 3300003322 Unclassified 1409
4 rootH1_10011664 3300003323 Bacteria 12647
5 rootH1_10234821 3300003323 Bacteria 1023
6 rootH1_10362314 3300003323 Bacteria 2206
7 Ga0055535_1005248 3300003761 Unclassified 2895
8 Ga0065704_10084550 3300005289 Bacteria 3322
9 Ga0070658_10000917 3300005327 Bacteria 25190
10 Ga0070683_100481840 3300005329 Bacteria 1184
11 Ga0070674_100448399 3300005356 Bacteria 1064
12 Ga0070688_100413856 3300005365 Bacteria 1000
13 Ga0070659_100000100 3300005366 Bacteria 63786
14 Ga0070667_100591778 3300005367 Bacteria 1022
15 Ga0070678_100194361 3300005456 Bacteria 1670
16 Ga0068867_100087995 3300005459 Bacteria 2353
17 Ga0068867_100464197 3300005459 Bacteria 1081
18 Ga0070685_10268796 3300005466 Bacteria 1137
19 Ga0068853_100008384 3300005539 Bacteria 8301
20 Ga0068855_100114425 3300005563 Bacteria 3093
21 Ga0068855_101055359 3300005563 Bacteria 851
22 Ga0070664_100255387 3300005564 Bacteria 1576
23 Ga0068859_100031883 3300005617 Bacteria 5294
24 Ga0068851_10127827 3300005834 Bacteria 1371
25 Ga0068863_100115535 3300005841 Bacteria 2557
26 Ga0068863_100429242 3300005841 Bacteria 1295
27 Ga0068863_100669082 3300005841 Bacteria 1030
28 Ga0068871_100526715 3300006358 Bacteria 1068
29 Ga0068865_100465969 3300006881 Bacteria 1047
30 Ga0097620_100031882 3300006931 Bacteria 5294
31 Ga0079104_1033617 3300006946 Bacteria 1253
32 Ga0105250_10108933 3300009092 Bacteria 1133
33 Ga0105240_10599234 3300009093 Unclassified 1213
34 Ga0111539_10159355 3300009094 Unclassified 2640
35 Ga0105247_10043963 3300009101 Bacteria 2738
36 Ga0105241_10017279 3300009174 Bacteria 5300
37 Ga0105242_10100615 3300009176 Bacteria 2448
38 Ga0105237_10003216 3300009545 Bacteria 19562
39 Ga0105237_10082693 3300009545 Bacteria 3201
40 Ga0105237_10928615 3300009545 Unclassified 877
41 Ga0105239_10000115 3300010375 Bacteria 113217
42 Ga0105239_10014984 3300010375 Bacteria 8594
43 Ga0105239_10048703 3300010375 Bacteria 4647
44 Ga0105239_10049657 3300010375 Bacteria 4600
45 Ga0105246_10033864 3300011119 Bacteria 3398
46 Ga0157370_10000022 3300013104 Bacteria 163793
47 Ga0157370_10109391 3300013104 Bacteria 2584
48 Ga0157370_10114290 3300013104 Bacteria 2522
49 Ga0157370_10496228 3300013104 Unclassified 1121
50 Ga0157369_10000498 3300013105 Bacteria 51923
51 Ga0157369_10194458 3300013105 Bacteria 2131
52 Ga0157374_10426664 3300013296 Bacteria 1325
53 Ga0157374_10706537 3300013296 Unclassified 1021
54 Ga0163162_10044196 3300013306 Bacteria 4461
55 Ga0157372_10140485 3300013307 Bacteria 2782
56 Ga0157372_10938660 3300013307 Bacteria 1003
57 Ga0157375_10175392 3300013308 Bacteria 2293
58 Ga0157375_10269560 3300013308 Bacteria 1864
59 Ga0157375_10745900 3300013308 Bacteria 1131
60 Ga0157375_11272733 3300013308 Bacteria 864
61 Ga0182008_10000015 3300014497 Bacteria 243121
62 Ga0182008_10000290 3300014497 Bacteria 39578
63 Ga0157379_10286043 3300014968 Bacteria 1501
64 Ga0182006_1000639 3300015261 Bacteria 24838
65 Ga0182006_1004000 3300015261 Bacteria 7365
66 Ga0182007_10000054 3300015262 Bacteria 91906
67 Ga0163161_10002489 3300017792 Bacteria 13131
68 Ga0163161_10018249 3300017792 Bacteria 4918
69 Ga0163161_10025902 3300017792 Bacteria 4153
70 Ga0209258_100167 3300025242 Bacteria 146217
71 Ga0209148_1000218 3300025254 Bacteria 96589
72 Ga0207656_10125453 3300025321 Bacteria 1199
73 Ga0207671_10005493 3300025914 Bacteria 11661
74 Ga0207671_10020213 3300025914 Bacteria 5072
75 Ga0207671_10436665 3300025914 Bacteria 1042
76 Ga0207671_10598586 3300025914 Unclassified 878
77 Ga0207650_10345213 3300025925 Bacteria 1223
78 Ga0207690_10014059 3300025932 Bacteria 4825
79 Ga0207704_10487080 3300025938 Bacteria 991
80 Ga0207689_10001845 3300025942 Bacteria 20047
81 Ga0207661_10018709 3300025944 Bacteria 5151
82 Ga0207667_10227584 3300025949 Bacteria 1910
83 Ga0207658_10084998 3300025986 Bacteria 2436
84 Ga0207677_10071161 3300026023 Bacteria 2454
85 Ga0207677_10469752 3300026023 Bacteria 1081
86 Ga0207641_10043833 3300026088 Bacteria 3759
87 Ga0207641_10414178 3300026088 Bacteria 1296
88 Ga0207648_10116514 3300026089 Bacteria 2348
89 Ga0207648_10478716 3300026089 Bacteria 1137
90 Ga0207683_10216398 3300026121 Bacteria 1745
91 Ga0307515_10000031 3300028794 Bacteria 358648
92 Ga0265327_10014059 3300031251 Bacteria 5266
93 Ga0307405_10000270 3300031731 Bacteria 19166
94 Ga0307414_10008711 3300032004 Bacteria 5779
95 Ga0307414_10033801 3300032004 Bacteria 3383
96 Ga0307414_10244248 3300032004 Bacteria 1488
97 Ga0451793_0583406 3300041452 Bacteria 1180
98 Ga0450899_002437 3300042135 Bacteria 2011
99 Ga0451577_0000946 3300042876 Bacteria 42577
100 Ga0453684_0009864 3300044712 Bacteria 16528
101 Ga0495627_026939 3300046453 Bacteria 1848
102 Ga0495638_0099561 3300046460 Bacteria 1740
103 Ga0495664_0385047 3300046477 Unclassified 843
104 Ga0495606_0080433 3300046507 Bacteria 2028
105 Ga0495606_0262159 3300046507 Bacteria 953
106 Ga0495643_0000586 3300046522 Bacteria 44354
107 Ga0495663_0000772 3300046525 Bacteria 10940
108 Ga0495625_0023972 3300046660 Bacteria 4653
109 Ga0495686_0119334 3300047472 Bacteria 1574
110 Ga0495686_0166357 3300047472 Unclassified 1285
111 Ga0496122_0001254 3300048925 Bacteria 42541
112 Ga0496126_0108583 3300048929 Bacteria 2419
113 Ga0500644_0000079 3300053088 Bacteria 59220
114 Ga0500646_0005537 3300053090 Bacteria 3193
115 Ga0500583_0000700 3300053092 Bacteria 9780
116 Ga0500583_0004606 3300053092 Bacteria 4518
117 Ga0500651_0197963 3300053093 Bacteria 1186
118 Ga0500607_058693 3300053121 Bacteria 2024
119 Ga0500589_001380 3300053147 Bacteria 7159
120 Ga0500622_0000301 3300053156 Bacteria 50446
121 Ga0500622_0001201 3300053156 Bacteria 21308
122 Ga0500622_0247510 3300053156 Bacteria 784
123 Ga0500645_070338 3300053730 Bacteria 1005
124 2586210474 2585427687 Bacteria 5544917
125 2738700621 2738541273 Bacteria 4048577
126 2738757665 2738541283 Bacteria 7222293
127 2739254370 2738543014 Bacteria 4048139
128 2740057140 2739367874 Bacteria 4872888
129 2842914606 2842909656 Bacteria 6185908
130 2881248507 2881247448 Bacteria 3717788
131 2896113733 2896109856 Bacteria 7140722
132 2896320165 2896317667 Bacteria 4606601
133 2896320179 2896317667 Bacteria 4606601
134 2914759915 2914759650 Bacteria 4701441
135 2914762986 2914759650 Bacteria 4701441
136 2919186731 2919186247 Bacteria 6244071
137 2929180761 2929177148 Bacteria 7883697
138 2939666000 2939664404 Bacteria 6364494
139 2945983157 2945977869 Bacteria 7777518
140 2946017451 2946013367 Bacteria 7766675
141 Ga0105239_10763502
142 rootH2_10006910
143 rootL2_10353171
144 rootH1_10011664
145 rootH1_10234821
146 rootH1_10362314
147 Ga0055535_1005248
148 Ga0065704_10084550
149 Ga0070658_10000917
150 Ga0070683_100481840
151 Ga0070674_100448399
152 Ga0070688_100413856
153 Ga0070659_100000100
154 Ga0070667_100591778
155 Ga0070678_100194361
156 Ga0068867_100087995
157 Ga0068867_100464197
158 Ga0070685_10268796
159 Ga0068853_100008384
160 Ga0068855_100114425
161 Ga0068855_101055359
162 Ga0070664_100255387
163 Ga0068859_100031883
164 Ga0068851_10127827
165 Ga0068863_100115535
166 Ga0068863_100429242
167 Ga0068863_100669082
168 Ga0068871_100526715
169 Ga0068865_100465969
170 Ga0097620_100031882
171 Ga0079104_1033617
172 Ga0105250_10108933
173 Ga0105240_10599234
174 Ga0111539_10159355
175 Ga0105247_10043963
176 Ga0105241_10017279
177 Ga0105242_10100615
178 Ga0105237_10003216
179 Ga0105237_10082693
180 Ga0105237_10928615
181 Ga0105239_10000115
182 Ga0105239_10014984
183 Ga0105239_10048703
184 Ga0105239_10049657
185 Ga0105246_10033864
186 Ga0157370_10000022
187 Ga0157370_10109391
188 Ga0157370_10114290
189 Ga0157370_10496228
190 Ga0157369_10000498
191 Ga0157369_10194458
192 Ga0157374_10426664
193 Ga0157374_10706537
194 Ga0163162_10044196
195 Ga0157372_10140485
196 Ga0157372_10938660
197 Ga0157375_10175392
198 Ga0157375_10269560
199 Ga0157375_10745900
200 Ga0157375_11272733
201 Ga0182008_10000015
202 Ga0182008_10000290
203 Ga0157379_10286043
204 Ga0182006_1000639
205 Ga0182006_1004000
206 Ga0182007_10000054
207 Ga0163161_10002489
208 Ga0163161_10018249
209 Ga0163161_10025902
210 Ga0209258_100167
211 Ga0209148_1000218
212 Ga0207656_10125453
213 Ga0207671_10005493
214 Ga0207671_10020213
215 Ga0207671_10436665
216 Ga0207671_10598586
217 Ga0207650_10345213
218 Ga0207690_10014059
219 Ga0207704_10487080
220 Ga0207689_10001845
221 Ga0207661_10018709
222 Ga0207667_10227584
223 Ga0207658_10084998
224 Ga0207677_10071161
225 Ga0207677_10469752
226 Ga0207641_10043833
227 Ga0207641_10414178
228 Ga0207648_10116514
229 Ga0207648_10478716
230 Ga0207683_10216398
231 Ga0307515_10000031
232 Ga0265327_10014059
233 Ga0307405_10000270
234 Ga0307414_10008711
235 Ga0307414_10033801
236 Ga0307414_10244248
237 Ga0451793_0583406
238 Ga0450899_002437
239 Ga0451577_0000946
240 Ga0453684_0009864
241 Ga0495627_026939
242 Ga0495638_0099561
243 Ga0495664_0385047
244 Ga0495606_0080433
245 Ga0495606_0262159
246 Ga0495643_0000586
247 Ga0495663_0000772
248 Ga0495625_0023972
249 Ga0495686_0119334
250 Ga0495686_0166357
251 Ga0496122_0001254
252 Ga0496126_0108583
253 Ga0500644_0000079
254 Ga0500646_0005537
255 Ga0500583_0000700
256 Ga0500583_0004606
257 Ga0500651_0197963
258 Ga0500607_058693
259 Ga0500589_001380
260 Ga0500622_0000301
261 Ga0500622_0001201
262 Ga0500622_0247510
263 Ga0500645_070338
264 2586210474
265 2738700621
266 2738757665
267 2739254370
268 2740057140
269 2842914606
270 2881248507
271 2896113733
272 2896320165
273 2896320179
274 2914759915
275 2914762986
276 2919186731
277 2929180761
278 2939666000
279 2945983157
280 2946017451

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF09844

DUF2071

Uncharacterized conserved protein (COG2071)

10

224

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
3cmb-assembly1.cif.gz_D crystal structure of acetoacetate decarboxylase (yp_001047042.1) from methanoculleus marisnigri jr1 at 1.60 a resolution 0.6675 2 231
3cmb-assembly1.cif.gz_D crystal structure of acetoacetate decarboxylase (yp_001047042.1) from methanoculleus marisnigri jr1 at 1.60 a resolution 0.6437 2 231
3c8w-assembly1.cif.gz_A crystal structure of acetoacetate decarboxylase (adc) (yp_094708.1) from legionella pneumophila subsp. pneumophila str. philadelphia 1 at 1.60 a resolution 0.6432 2 234
6eej-assembly1.cif.gz_D streptomyces bingchenggensis aldolase-dehydratase in covalent complex with dienone product. 0.625 2 234
3bgt-assembly1.cif.gz_D structural studies of acetoacetate decarboxylase 0.6153 1 238
ID Description Score Start End Superfamily
af_P95287_35_247_2.40.400.10 Mainly Beta;Beta Barrel;Acetoacetate decarboxylase-like;Acetoacetate decarboxylase-like 0.7796 7 226 2.40.400.10
af_P95287_35_247_2.40.400.10 Mainly Beta;Beta Barrel;Acetoacetate decarboxylase-like;Acetoacetate decarboxylase-like 0.7697 7 226 2.40.400.10
af_O53564_9_236_2.40.400.10 Mainly Beta;Beta Barrel;Acetoacetate decarboxylase-like;Acetoacetate decarboxylase-like 0.7266 1 232 2.40.400.10
af_O53564_9_236_2.40.400.10 Mainly Beta;Beta Barrel;Acetoacetate decarboxylase-like;Acetoacetate decarboxylase-like 0.7008 1 232 2.40.400.10
af_Q4DWN5_13_275_3.30.230.70 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;GHMP Kinase, N-terminal domain 0.6609 113 149 3.30.230.70
ID Description Score Start End GO Terms
AF-A0A520BL89-F1-model_v4 Uncharacterized protein 0.9907 29 234
AF-A0A6M6BJ05-F1-model_v4 DUF2071 domain-containing protein 0.9878 1 234
AF-A0A7W3MFM7-F1-model_v4 deleted 0.9872 1 234
AF-A0A219ABZ8-F1-model_v4 DUF2071 domain-containing protein 0.9871 1 234
AF-A0A853VRB0-F1-model_v4 deleted 0.9851 1 234

Map