F179493

General Info

Members Datasets Scaffolds Average Seq Length
140 80 131 519

Family's Representative Sequence

Representative Sequence 3300009763|Ga0123340_1000026|Ga0123340_100002627
Length 574
Sequence MDDHKTSLDNDVGNRELSASLAAARTKTDASARVRPTENRPAANGRTGPVDDTASAIDRPQFLIRFNSILFLEPAGRPAAEQSQPDCFGDLNLDQIVTAVTAGREEYDLKPFFHAALTDCDAIVYRQEIMRDVEDNSVRQAIGSFATEMRAMREIFEEIAKLHFDLQKQALLLDAINVCCQSTAELASALERLSPKSRGLHGFCAWLRSYVDSPRFETLAATARDLRADLSAVRYSVLINGSKVTVRNFKGETDYSADIEDVFGKFSQAAPKDYRHELRDSSWMNHVEAKILELVAVLNPALFGRLGQFCAAEDGQFVDPAVSTFDREIQFYLSYLAYISPLREDGLPFSYPVMSATSKEMTALGCFDLALAGKLNREGQRVVTNDLMLTGNERILVVSGPNQGGKTTFARTFGQLAHLARLGCPIPGRDTRLFLPDRIFTHFERQEDSRNLRGKLQDDLVRIHDILAAATPRSVIVMNEIFTSTTLRDATFLSGKVLEHILKLDALCVWVTFIHELSTHSDRTVSMVSTIEPGDQAIRTYKVVRQPASGRSYAFSIAEKYGLTVERLKERIGR

Samples

Sample ID Description Type Environment
1 2501025502 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
2 2510917013 Paraburkholderia unamae MTI-641 Isolate Rhizosphere
3 2582581299 Rhizobium leguminosarum OV483 Isolate Rhizosphere
4 2884763398 Leifsonia sp. PS1209 Isolate Stem Tuber
5 2904615490 Paraburkholderia franconis CNPSo 3157 Isolate Unclassified
6 3006321560 Actinacidiphila epipremni PRB2-1 Isolate Unclassified
7 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
16 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
17 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
18 3300009763 Root nodule microbial communities of legume samples collected from Mexico - Siratro Mexico nodule mix Metagenome Nodule
19 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
20 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
21 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
22 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
23 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
24 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
25 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
33 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
34 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
35 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
36 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
37 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
38 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
39 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
40 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
41 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
42 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
43 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
44 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
45 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
46 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
47 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
48 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
49 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
50 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
51 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
52 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
53 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
54 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
55 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
56 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
57 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
58 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
59 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
60 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
61 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
62 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
63 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
64 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
65 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
68 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
69 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
70 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
71 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
72 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
73 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
74 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
75 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
76 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
77 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
78 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
79 641228493 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
80 643348555 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 93.57
Metatranscriptomes 0
Isolates 6.43

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 1.43
Rhizoplane 0
Rhizosphere 90.71
Stem 0
Stem Tuber 0.71
Unclassified 7.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10063225 3300003320 Bacteria 4665
2 Ga0070709_10060693 3300005434 Unclassified 2404
3 Ga0070714_100009538 3300005435 Bacteria 7637
4 Ga0070713_100000331 3300005436 Bacteria 30887
5 Ga0070713_100014376 3300005436 Bacteria 5876
6 Ga0070706_100000709 3300005467 Bacteria 37439
7 Ga0070706_100043690 3300005467 Bacteria 4140
8 Ga0070706_100058502 3300005467 Bacteria 3557
9 Ga0070706_100131632 3300005467 Bacteria 2334
10 Ga0070707_100001447 3300005468 Bacteria 23241
11 Ga0070707_100012350 3300005468 Bacteria 7974
12 Ga0070698_100000888 3300005471 Bacteria 32859
13 Ga0070698_100044410 3300005471 Unclassified 4551
14 Ga0070698_100054028 3300005471 Unclassified 4080
15 Ga0070697_100072342 3300005536 Bacteria 2829
16 Ga0070697_100189666 3300005536 Bacteria 1744
17 Ga0068855_100051168 3300005563 Bacteria 4866
18 Ga0070717_10040690 3300006028 Bacteria 3787
19 Ga0070717_10072164 3300006028 Bacteria 2882
20 Ga0105237_10006330 3300009545 Bacteria 13156
21 Ga0123340_1000026 3300009763 Bacteria 46465
22 Ga0123341_1000042 3300009765 Bacteria 58276
23 Ga0105239_10133381 3300010375 Bacteria 2764
24 Ga0157369_10000358 3300013105 Bacteria 60799
25 Ga0213872_10028657 3300021361 Bacteria 2554
26 Ga0213874_10009141 3300021377 Bacteria 2441
27 Ga0213876_10002709 3300021384 Bacteria 10321
28 Ga0207699_10050239 3300025906 Unclassified 2458
29 Ga0207671_10077582 3300025914 Bacteria 2487
30 Ga0207646_10001726 3300025922 Bacteria 26574
31 Ga0207700_10008065 3300025928 Bacteria 6495
32 Ga0207700_10044380 3300025928 Unclassified 3272
33 Ga0207664_10002797 3300025929 Bacteria 11589
34 Ga0207667_10041721 3300025949 Bacteria 4879
35 Ga0207703_10006108 3300026035 Bacteria 9638
36 Ga0265323_10010821 3300028653 Unclassified 3694
37 Ga0265322_10002669 3300028654 Bacteria 5480
38 Ga0265339_10000860 3300031249 Bacteria 23335
39 Ga0265316_10001165 3300031344 Bacteria 28417
40 Ga0265342_10034580 3300031712 Bacteria 3100
41 Ga0316576_10019929 3300031727 Bacteria 4603
42 Ga0316578_10011906 3300031728 Bacteria 4570
43 Ga0307412_10048795 3300031911 Bacteria 2786
44 Ga0316583_10000979 3300032133 Bacteria 9195
45 Ga0316574_0000078 3300035398 Bacteria 27173
46 Ga0316574_0006090 3300035398 Bacteria 6490
47 Ga0373937_0087252 3300036401 Bacteria 2888
48 Ga0436365_0090101 3300039437 Bacteria 31059
49 Ga0436360_0283258 3300039438 Unclassified 2759
50 Ga0436361_0463433 3300039447 Bacteria 5409
51 Ga0436361_0741080 3300039447 Bacteria 4919
52 Ga0436363_1464933 3300039450 Bacteria 5196
53 Ga0495580_0000083 3300046472 Bacteria 60283
54 Ga0495583_0004879 3300046506 Bacteria 9360
55 Ga0495610_0000749 3300046512 Bacteria 30647
56 Ga0495620_0001040 3300046515 Bacteria 17034
57 Ga0495648_0027446 3300046524 Bacteria 3810
58 Ga0495687_020483 3300047443 Bacteria 3221
59 Ga0495673_0000304 3300047469 Bacteria 65575
60 Ga0495682_0000856 3300049460 Bacteria 19009
61 Ga0501031_0011357 3300049568 Bacteria 5800
62 Ga0501031_0017080 3300049568 Bacteria 4714
63 Ga0501032_0000032 3300049569 Bacteria 122607
64 Ga0501032_0001505 3300049569 Bacteria 18632
65 Ga0501032_0003599 3300049569 Bacteria 11803
66 Ga0501033_0000262 3300049570 Bacteria 50390
67 Ga0501033_0002161 3300049570 Bacteria 17012
68 Ga0501033_0008778 3300049570 Bacteria 7812
69 Ga0501033_0014449 3300049570 Bacteria 5995
70 Ga0501034_0001264 3300049571 Bacteria 34330
71 Ga0501034_0004954 3300049571 Bacteria 14656
72 Ga0501034_0009566 3300049571 Bacteria 10144
73 Ga0501034_0040089 3300049571 Bacteria 4742
74 Ga0501034_0100068 3300049571 Bacteria 2893
75 Ga0501036_0011872 3300049572 Bacteria 7220
76 Ga0501036_0026639 3300049572 Bacteria 4882
77 Ga0501036_0044663 3300049572 Bacteria 3754
78 Ga0501036_0074936 3300049572 Bacteria 2862
79 Ga0501037_0000188 3300049573 Bacteria 57466
80 Ga0501037_0000460 3300049573 Bacteria 33086
81 Ga0501037_0039452 3300049573 Bacteria 3476
82 Ga0501038_0000181 3300049574 Bacteria 53767
83 Ga0501038_0022010 3300049574 Bacteria 5717
84 Ga0501038_0119443 3300049574 Unclassified 2176
85 Ga0501039_0000036 3300049575 Bacteria 123633
86 Ga0501039_0055271 3300049575 Unclassified 3074
87 Ga0501043_0000212 3300049579 Bacteria 53127
88 Ga0501043_0038469 3300049579 Bacteria 3761
89 Ga0501046_0000410 3300049580 Bacteria 42702
90 Ga0501046_0017716 3300049580 Bacteria 5941
91 Ga0501047_0000344 3300049581 Bacteria 52888
92 Ga0501047_0004781 3300049581 Bacteria 12742
93 Ga0501047_0008006 3300049581 Bacteria 9967
94 Ga0501047_0011393 3300049581 Bacteria 8416
95 Ga0501047_0035147 3300049581 Bacteria 4841
96 Ga0501048_0010063 3300049582 Bacteria 7074
97 Ga0501067_0033700 3300049583 Bacteria 2841
98 Ga0501068_0077064 3300049584 Bacteria 2041
99 Ga0501069_0015721 3300049585 Bacteria 4057
100 Ga0501070_0000058 3300049586 Bacteria 94954
101 Ga0501070_0000194 3300049586 Bacteria 56971
102 Ga0501070_0000893 3300049586 Bacteria 27148
103 Ga0501070_0013648 3300049586 Bacteria 6844
104 Ga0501073_0010045 3300049589 Bacteria 6959
105 Ga0501074_0004446 3300049590 Bacteria 10031
106 Ga0501074_0014436 3300049590 Bacteria 5748
107 Ga0501080_0001694 3300049742 Bacteria 18799
108 Ga0501083_0001138 3300049744 Bacteria 17861
109 Ga0501083_0005342 3300049744 Bacteria 9089
110 Ga0501035_0000589 3300049822 Bacteria 40009
111 Ga0501035_0000773 3300049822 Bacteria 34333
112 Ga0501035_0011693 3300049822 Bacteria 8134
113 Ga0501035_0015043 3300049822 Bacteria 7140
114 Ga0501035_0017230 3300049822 Bacteria 6659
115 Ga0501035_0019537 3300049822 Bacteria 6227
116 Ga0501035_0028429 3300049822 Bacteria 5103
117 Ga0501035_0037741 3300049822 Bacteria 4373
118 Ga0501044_0000317 3300049823 Bacteria 60978
119 Ga0501044_0000632 3300049823 Bacteria 42426
120 Ga0501044_0002958 3300049823 Bacteria 19320
121 Ga0501044_0008419 3300049823 Bacteria 11310
122 Ga0501044_0010753 3300049823 Bacteria 9929
123 Ga0501044_0013253 3300049823 Bacteria 8925
124 Ga0501044_0025325 3300049823 Bacteria 6287
125 Ga0501044_0061967 3300049823 Bacteria 3825
126 Ga0501044_0110960 3300049823 Bacteria 2751
127 Ga0501045_0036946 3300049824 Bacteria 3549
128 Ga0501045_0115640 3300049824 Bacteria 1990
129 Ga0501082_0000038 3300060353 Bacteria 94168
130 Ga0501082_0020164 3300060353 Bacteria 5745
131 Ga0501082_0029583 3300060353 Bacteria 4719

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049581 Ga0501047_0011393 Ga0501047_0011393_7105_8382 424
2 3300028654 Ga0265322_10002669 Ga0265322_100026693 434
3 3300049571 Ga0501034_0040089 Ga0501034_0040089_574_2277 441
4 3300049823 Ga0501044_0061967 Ga0501044_0061967_1570_3273 441
5 3300049574 Ga0501038_0119443 Ga0501038_0119443_829_2166 443
6 3300049589 Ga0501073_0010045 Ga0501073_0010045_3028_4557 469
7 3300031911 Ga0307412_10048795 Ga0307412_100487951 478
8 3300046472 Ga0495580_0000083 Ga0495580_0000083_16220_17770 478
9 3300046524 Ga0495648_0027446 Ga0495648_0027446_168_1718 478
10 3300047469 Ga0495673_0000304 Ga0495673_0000304_42519_44069 478
11 3300049460 Ga0495682_0000856 Ga0495682_0000856_1965_3515 478
12 3300010375 Ga0105239_10133381 Ga0105239_101333812 483
13 3300005435 Ga0070714_100009538 Ga0070714_1000095384 484
14 3300005436 Ga0070713_100000331 Ga0070713_10000033115 484
15 3300006028 Ga0070717_10040690 Ga0070717_100406902 484
16 3300025928 Ga0207700_10008065 Ga0207700_100080654 484
17 3300025929 Ga0207664_10002797 Ga0207664_100027972 484
18 3300049586 Ga0501070_0013648 Ga0501070_0013648_3116_4651 491
19 3300049590 Ga0501074_0014436 Ga0501074_0014436_2560_4095 491
20 3300049822 Ga0501035_0028429 Ga0501035_0028429_2507_4204 491
21 3300049569 Ga0501032_0001505 Ga0501032_0001505_9300_11030 492
22 3300049570 Ga0501033_0000262 Ga0501033_0000262_12284_14014 492
23 3300049571 Ga0501034_0001264 Ga0501034_0001264_25192_26922 492
24 3300049572 Ga0501036_0026639 Ga0501036_0026639_651_2381 492
25 3300049573 Ga0501037_0000460 Ga0501037_0000460_27756_29486 492
26 3300049580 Ga0501046_0000410 Ga0501046_0000410_6387_8117 492
27 3300049581 Ga0501047_0000344 Ga0501047_0000344_6387_8117 492
28 3300049582 Ga0501048_0010063 Ga0501048_0010063_3272_5002 492
29 3300049822 Ga0501035_0000773 Ga0501035_0000773_7412_9142 492
30 3300049823 Ga0501044_0000317 Ga0501044_0000317_50255_51985 492
31 3300049579 Ga0501043_0038469 Ga0501043_0038469_1995_3527 495
32 3300049586 Ga0501070_0000058 Ga0501070_0000058_13483_15042 498
33 3300049569 Ga0501032_0000032 Ga0501032_0000032_77981_79501 501
34 3300049572 Ga0501036_0011872 Ga0501036_0011872_4500_6020 501
35 3300049573 Ga0501037_0000188 Ga0501037_0000188_41313_42833 501
36 3300049574 Ga0501038_0000181 Ga0501038_0000181_14250_15770 501
37 3300049575 Ga0501039_0000036 Ga0501039_0000036_42979_44499 501
38 3300049579 Ga0501043_0000212 Ga0501043_0000212_37998_39518 501
39 3300049584 Ga0501068_0077064 Ga0501068_0077064_432_1952 501
40 3300049586 Ga0501070_0000194 Ga0501070_0000194_13560_15080 501
41 3300049823 Ga0501044_0000632 Ga0501044_0000632_9448_10968 501
42 3300049824 Ga0501045_0036946 Ga0501045_0036946_169_1689 501
43 3300005467 Ga0070706_100000709 Ga0070706_10000070915 503
44 3300005471 Ga0070698_100054028 Ga0070698_1000540282 503
45 3300035398 Ga0316574_0006090 Ga0316574_0006090_3376_4893 503
46 3300039447 Ga0436361_0463433 Ga0436361_0463433_1877_3397 504
47 3300049570 Ga0501033_0002161 Ga0501033_0002161_3224_4762 506
48 3300049581 Ga0501047_0008006 Ga0501047_0008006_4243_5781 506
49 3300049822 Ga0501035_0017230 Ga0501035_0017230_839_2377 506
50 iso_pu_bacteria 2510917013 2511093774 506
51 3300013105 Ga0157369_10000358 Ga0157369_1000035832 507
52 iso_pu_bacteria 3006321560 3006324889 507
53 3300036401 Ga0373937_0087252 Ga0373937_0087252_1044_2579 508
54 3300046512 Ga0495610_0000749 Ga0495610_0000749_14380_15909 508
55 3300049568 Ga0501031_0011357 Ga0501031_0011357_1171_2742 508
56 3300049569 Ga0501032_0003599 Ga0501032_0003599_9414_10985 508
57 3300049572 Ga0501036_0044663 Ga0501036_0044663_1816_3387 508
58 3300049574 Ga0501038_0022010 Ga0501038_0022010_1812_3383 508
59 3300049580 Ga0501046_0017716 Ga0501046_0017716_322_1893 508
60 3300049581 Ga0501047_0004781 Ga0501047_0004781_9071_10642 508
61 3300049583 Ga0501067_0033700 Ga0501067_0033700_835_2406 508
62 3300049744 Ga0501083_0005342 Ga0501083_0005342_632_2203 508
63 3300049822 Ga0501035_0011693 Ga0501035_0011693_3684_5255 508
64 3300049823 Ga0501044_0002958 Ga0501044_0002958_15031_16602 508
65 3300060353 Ga0501082_0020164 Ga0501082_0020164_3029_4600 508
66 iso_pu_bacteria 2884763398 2884766591 508
67 3300031727 Ga0316576_10019929 Ga0316576_100199293 509
68 3300031728 Ga0316578_10011906 Ga0316578_100119065 509
69 3300060353 Ga0501082_0000038 Ga0501082_0000038_23027_24574 509
70 3300005434 Ga0070709_10060693 Ga0070709_100606932 510
71 3300005436 Ga0070713_100014376 Ga0070713_1000143764 510
72 3300005467 Ga0070706_100043690 Ga0070706_1000436903 510
73 3300005467 Ga0070706_100058502 Ga0070706_1000585023 510
74 3300005468 Ga0070707_100012350 Ga0070707_1000123508 510
75 3300005471 Ga0070698_100000888 Ga0070698_10000088812 510
76 3300005536 Ga0070697_100072342 Ga0070697_1000723421 510
77 3300005536 Ga0070697_100189666 Ga0070697_1001896661 510
78 3300006028 Ga0070717_10072164 Ga0070717_100721643 510
79 3300021361 Ga0213872_10028657 Ga0213872_100286572 510
80 3300021384 Ga0213876_10002709 Ga0213876_100027097 510
81 3300025906 Ga0207699_10050239 Ga0207699_100502392 510
82 3300025928 Ga0207700_10044380 Ga0207700_100443801 510
83 3300028653 Ga0265323_10010821 Ga0265323_100108212 510
84 3300031344 Ga0265316_10001165 Ga0265316_1000116516 510
85 3300031712 Ga0265342_10034580 Ga0265342_100345802 510
86 3300032133 Ga0316583_10000979 Ga0316583_100009796 510
87 3300039437 Ga0436365_0090101 Ga0436365_0090101_22510_24048 510
88 3300039438 Ga0436360_0283258 Ga0436360_0283258_118_1656 510
89 3300039447 Ga0436361_0741080 Ga0436361_0741080_1703_3241 510
90 3300039450 Ga0436363_1464933 Ga0436363_1464933_3018_4556 510
91 3300047443 Ga0495687_020483 Ga0495687_020483_1142_2677 510
92 3300049570 Ga0501033_0008778 Ga0501033_0008778_586_2133 510
93 3300049585 Ga0501069_0015721 Ga0501069_0015721_1174_2709 510
94 3300049822 Ga0501035_0015043 Ga0501035_0015043_263_1810 510
95 3300049822 Ga0501035_0019537 Ga0501035_0019537_2044_3579 510
96 3300049823 Ga0501044_0010753 Ga0501044_0010753_1293_2828 510
97 3300049823 Ga0501044_0013253 Ga0501044_0013253_3760_5307 510
98 iso_pu_bacteria 2501025502 2501079410 510
99 3300005563 Ga0068855_100051168 Ga0068855_1000511682 511
100 3300009545 Ga0105237_10006330 Ga0105237_100063301 511
101 3300025914 Ga0207671_10077582 Ga0207671_100775822 511
102 3300025949 Ga0207667_10041721 Ga0207667_100417213 511
103 3300049568 Ga0501031_0017080 Ga0501031_0017080_90_1682 511
104 3300049570 Ga0501033_0014449 Ga0501033_0014449_2714_4306 511
105 3300049571 Ga0501034_0004954 Ga0501034_0004954_11401_12993 511
106 3300049571 Ga0501034_0100068 Ga0501034_0100068_814_2391 511
107 3300049572 Ga0501036_0074936 Ga0501036_0074936_433_2025 511
108 3300049573 Ga0501037_0039452 Ga0501037_0039452_1170_2762 511
109 3300049575 Ga0501039_0055271 Ga0501039_0055271_430_2022 511
110 3300049581 Ga0501047_0035147 Ga0501047_0035147_1208_2809 511
111 3300049822 Ga0501035_0037741 Ga0501035_0037741_2574_4166 511
112 3300049823 Ga0501044_0025325 Ga0501044_0025325_3034_4626 511
113 3300049823 Ga0501044_0110960 Ga0501044_0110960_480_2057 511
114 3300005468 Ga0070707_100001447 Ga0070707_1000014474 512
115 3300005471 Ga0070698_100044410 Ga0070698_1000444102 512
116 3300025922 Ga0207646_10001726 Ga0207646_1000172628 512
117 3300049586 Ga0501070_0000893 Ga0501070_0000893_21988_23694 512
118 3300049590 Ga0501074_0004446 Ga0501074_0004446_666_2372 512
119 3300049742 Ga0501080_0001694 Ga0501080_0001694_15162_16868 512
120 3300049822 Ga0501035_0000589 Ga0501035_0000589_25865_27571 512
121 3300049823 Ga0501044_0008419 Ga0501044_0008419_6221_7927 512
122 3300049824 Ga0501045_0115640 Ga0501045_0115640_206_1831 512
123 iso_pu_bacteria 2582581299 2585231353 512
124 iso_pu_bacteria 2904615490 2904619854 512
125 iso_pu_bacteria 2904615490 2904620169 512
126 iso_pu_bacteria 643348555 643392161 512
127 3300009763 Ga0123340_1000026 Ga0123340_100002627 513
128 3300009765 Ga0123341_1000042 Ga0123341_100004228 513
129 3300026035 Ga0207703_10006108 Ga0207703_100061085 513
130 3300035398 Ga0316574_0000078 Ga0316574_0000078_22778_24358 513
131 3300046515 Ga0495620_0001040 Ga0495620_0001040_8702_10426 513
132 3300049571 Ga0501034_0009566 Ga0501034_0009566_4310_5992 513
133 3300003320 rootH2_10063225 rootH2_100632254 514
134 3300005467 Ga0070706_100131632 Ga0070706_1001316322 514
135 3300021377 Ga0213874_10009141 Ga0213874_100091412 514
136 3300031249 Ga0265339_10000860 Ga0265339_1000086011 514
137 3300046506 Ga0495583_0004879 Ga0495583_0004879_4768_6480 514
138 3300049744 Ga0501083_0001138 Ga0501083_0001138_2114_3712 514
139 3300060353 Ga0501082_0029583 Ga0501082_0029583_1378_2976 514
140 iso_pu_bacteria 641228493 641337722 514

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00488

MutS_V

MutS domain V

396

570

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3zqj-assembly2.cif.gz_B mycobacterium tuberculosis uvra 0.7667 396 486
7sh1-assembly1.cif.gz_B-2 class ii uvra protein - ecm16 0.7381 388 470
3pih-assembly1.cif.gz_A-2 t. maritima uvra in complex with fluorescein-modified dna 0.735 388 480
3zqj-assembly4.cif.gz_D mycobacterium tuberculosis uvra 0.7335 395 492
1ewr-assembly1.cif.gz_A crystal structure of taq muts 0.7133 229 513
ID Description Score Start End Superfamily
af_P43247_620_934_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8442 291 500 3.40.50.300
3zljA05 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8383 292 512 3.40.50.300
af_Q2FZD3_293_599_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8347 291 512 3.40.50.300
af_F4JP48_508_792_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8253 291 513 3.40.50.300
af_P40965_592_876_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8185 293 501 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A7S1XKS0-F1-model_v4 DNA mismatch repair proteins mutS family domain-containing protein 0.9388 377 459 GO:0005524
GO:0006298
GO:0030983
GO:0032301
GO:0140664
AF-A0A3P7KV04-F1-model_v4 DNA mismatch repair proteins mutS family domain-containing protein 0.929 335 458 GO:0005524
GO:0005634
GO:0005739
GO:0006298
GO:0030983
GO:0043504
GO:0140664
AF-D5LU65-F1-model_v4 Methyl-directed mismatch repair protein 0.9222 303 461 GO:0005524
GO:0005829
GO:0006298
GO:0030983
GO:0140664
AF-K3WJQ0-F1-model_v4 DNA mismatch repair proteins mutS family domain-containing protein 0.9191 357 461 GO:0005524
GO:0006298
GO:0030983
GO:0032301
GO:0140664
AF-A0A239CJ17-F1-model_v4 MutS domain V 0.9147 7 513 GO:0005524
GO:0005829
GO:0006298
GO:0030983
GO:0140664

Feature Viewer

pLDDT pTM Quality
87.86 0.86 High
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Predicted Structure (AlphaFold2)

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