F177967

General Info

Members Datasets Scaffolds Average Seq Length
139 111 100 530

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2919523602|2919525715
Length 607
Sequence TRWAGLVFISVAVALIIVDSTIVNVAIPSIVDELHIGSTGVQWVQESYTLVFAALLLVFGTLADRFGRRRMMLTGVVIFTLASVAAALAPTGAFLIGARLVQGVGGAMILPTTLSLINAGFRGKERALAFAVWGSTIGGMTALGPLLGGWLTTAFSWRWAFGINIPLGIIIVIGVLATVPESRDTRNAESVDWVGALLSVITSASLVFGLIEGRTYGWWLVDTRPSIGDWTWPFALSPVPIAFAVAIVGGVLFVLRGRARLKAGRSTMLALDLFRIPSFRNGNIAATIVALGEFGIVLALPIWLQNVLGYSALDTGLILLALAIGSFVASGFAGAFGNRIPAVTVVRVGLVAEIVGVAGLGLVITATTPWGALLPFLFVYGFGVGLATAQLTGVVLRDVPVDQSGQGSGTTSTARQIGSALGIAVLGTVLFASTTVVLDDSLQDRGVPAAQRDQLVSAVVDSSGAAIAALEKDPRTAPIAADAKTAFSDGTRWAAFSAAGFLVIGLVATLSLGSGRRREDEDARGGESPSDAPVAEAAPAAPAAAGAPGDATPRSELTADDVASMVQRLADALEADPQLERATAAAKRLDRRSRALLTRFFSDLARD

Samples

Sample ID Description Type Environment
1 2501939600 Micromonospora sp. L5 Isolate Unclassified
2 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
3 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
4 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
5 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
6 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
7 2643221572 Leifsonia sp. Root60 Isolate Unclassified
8 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
9 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
10 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
11 2773857759 Microbacterium sp. 1294 Isolate Unclassified
12 2808606306 Microbacterium sp. SLBN-146 Isolate Unclassified
13 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
14 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
15 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere
16 2844841374 Leifsonia soli DSM 23871 Isolate Rhizosphere
17 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
18 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
19 2855683550 Micromonospora sp. RP3T Isolate Unclassified
20 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
21 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
22 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
23 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
24 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
25 2919055335 Leifsonia sp. 1010 Isolate Rhizosphere
26 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
27 2919523602 Leifsonia shinshuensis 3821 Isolate Unclassified
28 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
29 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
30 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
31 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
32 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
33 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
34 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
35 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
36 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
37 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
38 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
39 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
40 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
41 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
42 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
43 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300012487 Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.old.130510 Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
49 3300013250 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_C05 Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
52 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
63 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
64 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
65 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
66 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
67 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
68 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
69 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
70 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
71 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
72 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
73 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
74 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
75 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
76 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
77 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
78 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
79 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
80 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
81 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
82 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
83 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
84 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
85 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
86 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
87 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
88 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
89 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
90 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
91 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
92 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
93 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
94 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
95 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
96 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
97 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
98 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
99 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
102 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
103 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
104 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
105 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
106 649633069 Micromonospora sp. L5 Isolate Unclassified
107 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
108 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
109 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
110 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule
111 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 70.5
Metatranscriptomes 1.44
Isolates 28.06

Biome Distribution

Category Percentage (%)
Aerial Root 0.72
Bulb 0
Endosphere 8.63
Nodule 0.72
Rhizoplane 15.11
Rhizosphere 53.96
Stem 0
Stem Tuber 0
Unclassified 20.86

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006562J51391_1042750 3300003578 Bacteria 10715
2 Ga0006562J51391_1042754 3300003578 Bacteria 3020
3 Ga0055539_1000019 3300003752 Bacteria 341727
4 Ga0055533_1000023 3300003756 Bacteria 341727
5 Ga0055525_1000088 3300003759 Bacteria 143732
6 Ga0065714_10068445 3300005288 Bacteria 4722
7 Ga0070682_100107772 3300005337 Bacteria 1851
8 Ga0070674_100161250 3300005356 Bacteria 1701
9 Ga0070672_100087678 3300005543 Bacteria 2505
10 Ga0068855_100018144 3300005563 Bacteria 8455
11 Ga0075364_10009751 3300006051 Bacteria 5773
12 Ga0075433_10051154 3300006852 Bacteria 3597
13 Ga0075434_100060411 3300006871 Bacteria 3770
14 Ga0105243_10061108 3300009148 Bacteria 3012
15 Ga0157321_1000461 3300012487 Bacteria 1856
16 Ga0157370_10011485 3300013104 Bacteria 9258
17 Ga0157369_10040082 3300013105 Bacteria 5116
18 Ga0157369_10045265 3300013105 Bacteria 4787
19 Ga0171462_1002 3300013250 Bacteria 1052134
20 Ga0157372_10063746 3300013307 Bacteria 4134
21 Ga0157372_10171560 3300013307 Bacteria 2510
22 Ga0163161_10021275 3300017792 Bacteria 4560
23 Ga0209566_100031 3300025225 Bacteria 341555
24 Ga0209674_100001 3300025226 Bacteria 4013750
25 Ga0209563_100001 3300025230 Bacteria 4013775
26 Ga0209563_100229 3300025230 Bacteria 27477
27 Ga0209677_100001 3300025253 Bacteria 4013787
28 Ga0209455_1000567 3300025272 Bacteria 24566
29 Ga0207706_10007050 3300025933 Bacteria 10389
30 Ga0207709_10011199 3300025935 Bacteria 4946
31 Ga0207709_10045913 3300025935 Bacteria 2648
32 Ga0207669_10025959 3300025937 Bacteria 3178
33 Ga0207667_10019426 3300025949 Bacteria 7587
34 Ga0207675_100011498 3300026118 Bacteria 8282
35 Ga0265337_1012599 3300028556 Bacteria 2867
36 Ga0265326_10000783 3300028558 Bacteria 11762
37 Ga0265326_10009358 3300028558 Bacteria 2929
38 Ga0265326_10012373 3300028558 Bacteria 2510
39 Ga0265334_10001444 3300028573 Bacteria 11424
40 Ga0265336_10003282 3300028666 Bacteria 6381
41 Ga0265338_10000757 3300028800 Bacteria 55097
42 Ga0265338_10005685 3300028800 Bacteria 16141
43 Ga0265324_10003374 3300029957 Bacteria 7635
44 Ga0265332_10003276 3300031238 Bacteria 7868
45 Ga0265325_10038442 3300031241 Bacteria 2526
46 Ga0265329_10004789 3300031242 Bacteria 5560
47 Ga0265329_10012656 3300031242 Bacteria 3025
48 Ga0265339_10040314 3300031249 Bacteria 2596
49 Ga0265316_10000174 3300031344 Bacteria 72573
50 Ga0265316_10000744 3300031344 Bacteria 36026
51 Ga0265316_10053143 3300031344 Bacteria 3175
52 Ga0265316_10093915 3300031344 Bacteria 2285
53 Ga0265314_10061453 3300031711 Bacteria 2558
54 Ga0265342_10000114 3300031712 Bacteria 88429
55 Ga0265342_10026653 3300031712 Bacteria 3618
56 Ga0316576_10072627 3300031727 Bacteria 2540
57 Ga0316574_0070326 3300035398 Bacteria 2210
58 Ga0466961_0017394 3300044693 Bacteria 4618
59 Ga0453684_0295437 3300044712 Bacteria 1843
60 Ga0495608_0066364 3300046511 Bacteria 2363
61 Ga0496100_0004731 3300048903 Bacteria 7259
62 Ga0496101_0028593 3300048904 Bacteria 3893
63 Ga0496101_0167609 3300048904 Bacteria 1687
64 Ga0496102_0191809 3300048905 Bacteria 1926
65 Ga0496103_0004553 3300048906 Bacteria 8393
66 Ga0496104_0104087 3300048907 Bacteria 2719
67 Ga0496104_0143852 3300048907 Bacteria 2290
68 Ga0496104_0255186 3300048907 Bacteria 1666
69 Ga0496105_0002307 3300048908 Bacteria 13837
70 Ga0496105_0013986 3300048908 Bacteria 6383
71 Ga0496105_0017697 3300048908 Bacteria 5718
72 Ga0496108_0009950 3300048911 Bacteria 7709
73 Ga0496109_0046899 3300048912 Bacteria 3926
74 Ga0496111_0077897 3300048914 Bacteria 2417
75 Ga0496113_0004708 3300048916 Bacteria 8420
76 Ga0496113_0046777 3300048916 Bacteria 3213
77 Ga0496114_0007075 3300048917 Bacteria 8854
78 Ga0496114_0019056 3300048917 Bacteria 5560
79 Ga0496114_0021762 3300048917 Bacteria 5218
80 Ga0496114_0123667 3300048917 Bacteria 2227
81 Ga0496115_0026796 3300048918 Bacteria 4503
82 Ga0496117_0002488 3300048920 Bacteria 23114
83 Ga0496118_0005513 3300048921 Bacteria 14361
84 Ga0496118_0086816 3300048921 Bacteria 2172
85 Ga0496120_0008122 3300048923 Bacteria 7700
86 Ga0496122_0000208 3300048925 Bacteria 131175
87 Ga0496123_0000003 3300048926 Bacteria 866556
88 Ga0496124_0157383 3300048927 Bacteria 1775
89 Ga0496125_0000935 3300048928 Bacteria 45862
90 Ga0496125_0017099 3300048928 Bacteria 6929
91 Ga0496125_0028639 3300048928 Bacteria 5025
92 Ga0501034_0003383 3300049571 Bacteria 18214
93 Ga0501034_0023342 3300049571 Bacteria 6304
94 Ga0501038_0048007 3300049574 Bacteria 3696
95 Ga0501070_0000034 3300049586 Bacteria 128605
96 Ga0501070_0001121 3300049586 Bacteria 24040
97 Ga0501035_0027609 3300049822 Bacteria 5187
98 nmdc:mga00v17_12582_c1 3300050491 Bacteria 4672
99 nmdc:mga0a205_62590_c1 3300050515 Bacteria 3595
100 Ga0500559_0000286 3300053136 Bacteria 39086

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048904 Ga0496101_0167609 Ga0496101_0167609_181_1530 412
2 3300048905 Ga0496102_0191809 Ga0496102_0191809_32_1381 412
3 3300017792 Ga0163161_10021275 Ga0163161_100212753 462
4 3300005337 Ga0070682_100107772 Ga0070682_1001077721 463
5 3300048907 Ga0496104_0255186 Ga0496104_0255186_196_1638 465
6 3300005543 Ga0070672_100087678 Ga0070672_1000876782 469
7 3300025937 Ga0207669_10025959 Ga0207669_100259593 470
8 3300046511 Ga0495608_0066364 Ga0495608_0066364_669_2303 471
9 3300049571 Ga0501034_0023342 Ga0501034_0023342_2849_4474 474
10 iso_pu_bacteria 2818991318 2819425807 477
11 3300048917 Ga0496114_0007075 Ga0496114_0007075_369_1991 479
12 3300009148 Ga0105243_10061108 Ga0105243_100611083 480
13 3300025935 Ga0207709_10045913 Ga0207709_100459132 480
14 3300048917 Ga0496114_0019056 Ga0496114_0019056_3317_4939 483
15 3300012487 Ga0157321_1000461 Ga0157321_10004611 485
16 3300048927 Ga0496124_0157383 Ga0496124_0157383_32_1642 486
17 3300048921 Ga0496118_0005513 Ga0496118_0005513_10534_12135 487
18 3300049574 Ga0501038_0048007 Ga0501038_0048007_94_1725 489
19 3300053136 Ga0500559_0000286 Ga0500559_0000286_14173_15762 495
20 3300044712 Ga0453684_0295437 Ga0453684_0295437_112_1764 496
21 3300048928 Ga0496125_0028639 Ga0496125_0028639_3375_5000 497
22 3300048908 Ga0496105_0017697 Ga0496105_0017697_143_1795 499
23 3300048917 Ga0496114_0021762 Ga0496114_0021762_1650_3302 499
24 3300013307 Ga0157372_10171560 Ga0157372_101715602 500
25 3300006051 Ga0075364_10009751 Ga0075364_100097512 501
26 3300050491 nmdc:mga00v17_12582_c1 nmdc:mga00v17_12582_c1_3038_4642 501
27 iso_pu_bacteria 8046352972 8046355523 501
28 3300005356 Ga0070674_100161250 Ga0070674_1001612501 502
29 3300025933 Ga0207706_10007050 Ga0207706_100070507 506
30 3300026118 Ga0207675_100011498 Ga0207675_1000114988 507
31 3300049571 Ga0501034_0003383 Ga0501034_0003383_4373_5947 509
32 3300048928 Ga0496125_0000935 Ga0496125_0000935_10462_12081 512
33 3300013105 Ga0157369_10045265 Ga0157369_100452652 514
34 3300048916 Ga0496113_0004708 Ga0496113_0004708_6038_7693 515
35 3300013307 Ga0157372_10063746 Ga0157372_100637464 517
36 3300048911 Ga0496108_0009950 Ga0496108_0009950_2623_4275 517
37 3300049586 Ga0501070_0001121 Ga0501070_0001121_13855_15474 517
38 3300006852 Ga0075433_10051154 Ga0075433_100511542 518
39 3300006871 Ga0075434_100060411 Ga0075434_1000604113 518
40 3300048916 Ga0496113_0046777 Ga0496113_0046777_1534_3177 518
41 3300050515 nmdc:mga0a205_62590_c1 nmdc:mga0a205_62590_c1_1658_3241 518
42 3300025272 Ga0209455_1000567 Ga0209455_10005678 519
43 3300025935 Ga0207709_10011199 Ga0207709_100111994 519
44 3300031242 Ga0265329_10004789 Ga0265329_100047894 520
45 3300031344 Ga0265316_10000174 Ga0265316_100001748 520
46 3300031712 Ga0265342_10000114 Ga0265342_1000011420 520
47 iso_pu_bacteria 8003856774 8003863695 520
48 3300028556 Ga0265337_1012599 Ga0265337_10125992 522
49 3300028558 Ga0265326_10000783 Ga0265326_100007836 522
50 3300028573 Ga0265334_10001444 Ga0265334_1000144410 522
51 3300028666 Ga0265336_10003282 Ga0265336_100032822 522
52 3300028800 Ga0265338_10000757 Ga0265338_1000075711 522
53 3300029957 Ga0265324_10003374 Ga0265324_100033742 522
54 3300031238 Ga0265332_10003276 Ga0265332_100032766 522
55 3300031241 Ga0265325_10038442 Ga0265325_100384421 522
56 3300031344 Ga0265316_10053143 Ga0265316_100531432 522
57 3300044693 Ga0466961_0017394 Ga0466961_0017394_1616_3325 522
58 3300048907 Ga0496104_0104087 Ga0496104_0104087_692_2332 522
59 3300048908 Ga0496105_0013986 Ga0496105_0013986_1747_3387 522
60 3300048912 Ga0496109_0046899 Ga0496109_0046899_761_2401 522
61 3300005563 Ga0068855_100018144 Ga0068855_1000181442 523
62 3300013104 Ga0157370_10011485 Ga0157370_100114854 523
63 3300025949 Ga0207667_10019426 Ga0207667_100194268 523
64 3300048914 Ga0496111_0077897 Ga0496111_0077897_25_1665 523
65 3300048920 Ga0496117_0002488 Ga0496117_0002488_10812_12422 523
66 3300028800 Ga0265338_10005685 Ga0265338_1000568515 525
67 iso_pu_bacteria 2919051321 2919054577 525
68 3300028558 Ga0265326_10009358 Ga0265326_100093582 526
69 3300031344 Ga0265316_10000744 Ga0265316_1000074414 526
70 3300031711 Ga0265314_10061453 Ga0265314_100614532 526
71 3300048921 Ga0496118_0086816 Ga0496118_0086816_392_1981 526
72 3300048923 Ga0496120_0008122 Ga0496120_0008122_5719_7308 526
73 3300048925 Ga0496122_0000208 Ga0496122_0000208_55957_57546 526
74 3300048926 Ga0496123_0000003 Ga0496123_0000003_53591_55180 526
75 3300048928 Ga0496125_0017099 Ga0496125_0017099_3877_5466 526
76 iso_pu_bacteria 2818991318 2819428608 527
77 3300031249 Ga0265339_10040314 Ga0265339_100403141 529
78 3300013105 Ga0157369_10040082 Ga0157369_100400822 530
79 3300049822 Ga0501035_0027609 Ga0501035_0027609_1729_3378 531
80 iso_pu_bacteria 2857729791 2857730854 531
81 iso_pu_bacteria 2870628048 2870629237 531
82 iso_pu_bacteria 2919443155 2919443803 531
83 iso_pu_bacteria 2928090899 2928092984 531
84 iso_pu_bacteria 2984580707 2984583439 531
85 3300003752 Ga0055539_1000019 Ga0055539_1000019215 532
86 3300003756 Ga0055533_1000023 Ga0055533_1000023110 532
87 3300003759 Ga0055525_1000088 Ga0055525_100008833 532
88 3300013250 Ga0171462_1002 Ga0171462_1002535 532
89 3300025225 Ga0209566_100031 Ga0209566_100031110 532
90 3300025226 Ga0209674_100001 Ga0209674_1000012042 532
91 3300025230 Ga0209563_100001 Ga0209563_1000012042 532
92 3300025253 Ga0209677_100001 Ga0209677_1000012042 532
93 iso_pu_bacteria 2501939600 2501942744 532
94 iso_pu_bacteria 2773857759 2774383088 532
95 iso_pu_bacteria 2808606306 2808629133 532
96 iso_pu_bacteria 2852677369 2852677673 532
97 iso_pu_bacteria 2855683550 2855684259 532
98 iso_pu_bacteria 2856858025 2856860494 532
99 iso_pu_bacteria 2977251589 2977253279 532
100 iso_pu_bacteria 649633069 649811231 532
101 3300048918 Ga0496115_0026796 Ga0496115_0026796_1744_3384 533
102 3300028558 Ga0265326_10012373 Ga0265326_100123732 535
103 3300031242 Ga0265329_10012656 Ga0265329_100126563 535
104 3300031344 Ga0265316_10093915 Ga0265316_100939152 535
105 3300031712 Ga0265342_10026653 Ga0265342_100266531 535
106 iso_pu_bacteria 2515154088 2515493789 535
107 iso_pu_bacteria 2515154129 2515722985 535
108 iso_pu_bacteria 2515154137 2515755178 535
109 iso_pu_bacteria 2515154203 2516087679 535
110 iso_pu_bacteria 8055412473 8055415210 535
111 3300005288 Ga0065714_10068445 Ga0065714_100684453 536
112 3300035398 Ga0316574_0070326 Ga0316574_0070326_426_2081 536
113 iso_pu_bacteria 8045830549 8045833615 536
114 3300031727 Ga0316576_10072627 Ga0316576_100726273 537
115 iso_pu_bacteria 2643221572 2643877380 537
116 iso_pu_bacteria 2643221669 2644384435 537
117 iso_pu_bacteria 2895660088 2895661808 537
118 iso_pu_bacteria 2935409751 2935409873 537
119 iso_pu_bacteria 2643221635 2644197424 538
120 3300048903 Ga0496100_0004731 Ga0496100_0004731_2368_4059 539
121 3300048904 Ga0496101_0028593 Ga0496101_0028593_1911_3602 539
122 3300048906 Ga0496103_0004553 Ga0496103_0004553_429_2120 539
123 3300048907 Ga0496104_0143852 Ga0496104_0143852_263_1954 539
124 3300048908 Ga0496105_0002307 Ga0496105_0002307_10502_12193 539
125 3300048917 Ga0496114_0123667 Ga0496114_0123667_430_2121 539
126 iso_pu_bacteria 2515154202 2516084017 539
127 iso_pu_bacteria 2818991469 2819726503 539
128 iso_pu_bacteria 8056037122 8056040033 539
129 iso_pu_bacteria 2928121344 2928122566 540
130 3300049586 Ga0501070_0000034 Ga0501070_0000034_60458_62107 541
131 iso_pu_bacteria 2721755702 2723640325 541
132 iso_pu_bacteria 2811994872 2812324817 542
133 3300025230 Ga0209563_100229 Ga0209563_10022922 543
134 iso_pu_bacteria 2844852863 2844854149 543
135 iso_pu_bacteria 2844841374 2844843601 586
136 iso_pu_bacteria 2919523602 2919525715 586
137 iso_pu_bacteria 2919055335 2919055593 587
138 3300003578 Ga0006562J51391_1042750 Ga0006562J51391_10427507 591
139 3300003578 Ga0006562J51391_1042754 Ga0006562J51391_10427542 591

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

9

221

0.87

PF05977

MFS_3

Transmembrane secretion effector

4

205

0.83

PF07690

MFS_1

Major Facilitator Superfamily

194

423

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
7y58-assembly1.cif.gz_A cryoem structure of qaca (d411n), an antibacterial efflux transporter from staphylococcus aureus 0.8771 1 515
7d5q-assembly2.cif.gz_B structure of norc transporter (k398a mutant) in an outward-open conformation in complex with a single-chain indian camelid antibody 0.8584 10 516
7d5p-assembly1.cif.gz_A structure of norc transporter in an outward-open conformation in complex with a single-chain indian camelid antibody 0.8539 8 515
7d5q-assembly2.cif.gz_B structure of norc transporter (k398a mutant) in an outward-open conformation in complex with a single-chain indian camelid antibody 0.8507 10 516
7d5q-assembly1.cif.gz_A structure of norc transporter (k398a mutant) in an outward-open conformation in complex with a single-chain indian camelid antibody 0.85 10 516
ID Description Score Start End Superfamily
af_P9WG87_21_208_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9627 7 198 1.20.1250.20
af_Q2G199_12_244_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9547 10 256 1.20.1250.20
af_P76269_18_258_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9546 12 260 1.20.1250.20
af_P36554_12_217_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9538 12 214 1.20.1250.20
af_Q03263_69_259_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9535 7 184 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A535C655-F1-model_v4 MFS transporter 0.9807 1 122 GO:0016020
GO:0022857
AF-A0A353DBH9-F1-model_v4 MFS transporter 0.9675 5 202 GO:0016020
GO:0022857
AF-A0A7X7SSR9-F1-model_v4 MFS transporter 0.9669 3 196 GO:0016020
GO:0022857
AF-A0A535C655-F1-model_v4 MFS transporter 0.9651 1 122 GO:0016020
GO:0022857
AF-A0A6L7EB22-F1-model_v4 deleted 0.959 6 178

Feature Viewer

pLDDT pTM Quality
87.1 0.81 High
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Predicted Structure (AlphaFold2)

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