F177083

General Info

Members Datasets Scaffolds Average Seq Length
139 97 278 882

Family's Representative Sequence

Representative Sequence 3300039447|Ga0436361_0705411|Ga0436361_0705411_12682_15459
Length 925
Sequence MADRYIGTRERSGRGGCFSLILALVVLLLCSRFIASTLIDYEWWKGLHQVDTWFALWLYGTLPVLAAIVLFFIVFWLAYKTGMRRRVETPLFGLLKRKYVTWIAAAVLAILAIVAGSATVDNWTIVRYVGGLRVPPHTEYVDPIFHRPLHFYFFGLPFYETLLRVVLVCAVLGLLIHWVAAHAEKLSRQIPDFRNPTGQFQFEPMSLREAFDATFVRLAIAILLAGIAVKIYLNRFDLLFQDHGQFLVGVNWLADHVVLPLQWCEILAAVLGAVLVLLKKGRWALVLLLIVPVRLILPGVIESLYVRPNELALEKPYIQHHIDATRAAYGLKERVKETTLEAVPEAPIDYAKHQAVLDNVRLWDWRAFHDTISQIQPLRPYVYMDTDVDRYTIDGRLRQVLISARELDIRQLGEAQSRWINPHLIYTHGYGVVMAEANRITPDGLPLLFIKDAPSVVTTKSLKFTRPEIYFSEQAHEPVYVDTAQQEFNYPSGSESVYTTYESEGGVPLSSPLMRLAAAVNYGDINVLLTSYLNDKSRMMIHRPIQERVSTLAPFLTWDTDPCIVLTQSGHLVWIVDGYMSSSAHPYSRELSLGDGPVNYIRNSVKATIDAYSGETNFYVFAPNDVLIQAYSRLFPTLFKPASAMPADLREHVRYPEMLFNAQAEIYRTFHMRDPEAFYNRADLWDLSKTAGAEGTTSVSPTYVVAALPGSNTAEFMLLTTFTPANKNNLVGAMYARCDGEHLGELVFEQLSKQNIIFGPIQIDARINQDQNISKDLTLWNQQGSQVLRGQTLVLPIDNSFLYVEPIYIQAAQASMPQLRKVALAMGNLLAYADTYEQALAQLIQEAGGNAPAQKSANQTAVAQPSQTPAAAGQTLAPNAQVSTPALQTLQQIRDHLQRYRELSAQGKWAEAGKELDAIQQLVQK

Samples

Sample ID Description Type Environment
1 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
5 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
6 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
7 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
8 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
9 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
12 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
15 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
16 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
17 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
18 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
19 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
20 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
21 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
22 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
23 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
24 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
25 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
26 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
27 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
28 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
29 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
39 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
40 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
41 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
42 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
43 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
44 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
45 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
46 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
47 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
48 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
49 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
50 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
51 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
52 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
53 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
54 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
55 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
56 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
57 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
58 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
59 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
60 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
61 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
62 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
63 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
64 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
65 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
66 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
67 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
68 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
69 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
70 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
71 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
72 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
73 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
74 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
75 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
76 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
77 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
78 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
79 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
80 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
82 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
85 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
86 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
87 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
88 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
89 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
90 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
91 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
92 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
93 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
94 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
95 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
96 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
97 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.72
Nodule 0
Rhizoplane 0
Rhizosphere 89.21
Stem 0
Stem Tuber 0
Unclassified 10.07

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436361_0705411 3300039447 Bacteria 15737
2 Ga0070683_100000025 3300005329 Bacteria 173339
3 Ga0070680_100013438 3300005336 Bacteria 6376
4 Ga0070709_10010619 3300005434 Bacteria 5106
5 Ga0070714_100039788 3300005435 Unclassified 3960
6 Ga0070713_100040056 3300005436 Bacteria 3807
7 Ga0070711_100024370 3300005439 Bacteria 3946
8 Ga0070663_100027530 3300005455 Bacteria 3862
9 Ga0070707_100000011 3300005468 Bacteria 158252
10 Ga0070684_100000103 3300005535 Bacteria 55305
11 Ga0068855_100111337 3300005563 Bacteria 3143
12 Ga0070664_100022875 3300005564 Bacteria 5156
13 Ga0068856_100001855 3300005614 Bacteria 22069
14 Ga0068856_100019241 3300005614 Bacteria 6628
15 Ga0068856_100019999 3300005614 Bacteria 6500
16 Ga0068852_100002225 3300005616 Bacteria 13305
17 Ga0068863_100009530 3300005841 Bacteria 9467
18 Ga0070717_10019194 3300006028 Bacteria 5358
19 Ga0075431_100003728 3300006847 Bacteria 14807
20 Ga0075431_100028956 3300006847 Bacteria 5696
21 Ga0075436_100004596 3300006914 Bacteria 9457
22 Ga0105240_10001098 3300009093 Bacteria 47733
23 Ga0105240_10001466 3300009093 Bacteria 40332
24 Ga0105240_10084756 3300009093 Bacteria 3885
25 Ga0105240_10097014 3300009093 Bacteria 3592
26 Ga0105248_10028125 3300009177 Bacteria 6262
27 Ga0105248_10117661 3300009177 Unclassified 2997
28 Ga0105237_10021962 3300009545 Bacteria 6552
29 Ga0157370_10002989 3300013104 Bacteria 20098
30 Ga0157369_10001600 3300013105 Bacteria 27714
31 Ga0157369_10006677 3300013105 Bacteria 13327
32 Ga0157374_10003794 3300013296 Bacteria 12717
33 Ga0157374_10085866 3300013296 Unclassified 2993
34 Ga0157378_10002288 3300013297 Bacteria 17012
35 Ga0157372_10015176 3300013307 Bacteria 8247
36 Ga0157372_10026421 3300013307 Bacteria 6318
37 Ga0213875_10000024 3300021388 Bacteria 200333
38 Ga0213875_10000057 3300021388 Bacteria 136082
39 Ga0213875_10001227 3300021388 Bacteria 17342
40 Ga0213871_10000468 3300021441 Bacteria 5482
41 Ga0207695_10002015 3300025913 Bacteria 31285
42 Ga0207695_10007220 3300025913 Bacteria 14201
43 Ga0207695_10031208 3300025913 Bacteria 5850
44 Ga0207663_10008112 3300025916 Bacteria 5472
45 Ga0207660_10005706 3300025917 Bacteria 8075
46 Ga0207646_10000055 3300025922 Bacteria 158886
47 Ga0207664_10024227 3300025929 Bacteria 4559
48 Ga0207664_10025503 3300025929 Unclassified 4456
49 Ga0207661_10000028 3300025944 Bacteria 173347
50 Ga0207667_10102386 3300025949 Bacteria 2954
51 Ga0207702_10001949 3300026078 Bacteria 20122
52 Ga0207698_10001470 3300026142 Bacteria 13706
53 Ga0265319_1001947 3300028563 Bacteria 11693
54 Ga0265318_10000076 3300028577 Bacteria 94026
55 Ga0265323_10003130 3300028653 Bacteria 7368
56 Ga0265338_10011315 3300028800 Bacteria 10324
57 Ga0265320_10000031 3300031240 Bacteria 147045
58 Ga0265329_10000860 3300031242 Bacteria 15331
59 Ga0265340_10004116 3300031247 Bacteria 8166
60 Ga0265340_10017551 3300031247 Unclassified 3702
61 Ga0265331_10000039 3300031250 Bacteria 194439
62 Ga0265316_10000662 3300031344 Bacteria 38352
63 Ga0265316_10004520 3300031344 Bacteria 13825
64 Ga0265316_10020749 3300031344 Bacteria 5585
65 Ga0265314_10010353 3300031711 Bacteria 7786
66 Ga0265314_10015463 3300031711 Bacteria 6055
67 Ga0373926_0004886 3300035083 Unclassified 4406
68 Ga0373954_0022358 3300035118 Unclassified 2868
69 Ga0373935_0006400 3300035692 Bacteria 7026
70 Ga0373927_0003278 3300035695 Bacteria 11643
71 Ga0373927_0007236 3300035695 Bacteria 7531
72 Ga0373927_0017014 3300035695 Bacteria 4791
73 Ga0373947_0000411 3300035725 Bacteria 24294
74 Ga0373937_0008832 3300036401 Bacteria 8742
75 Ga0373937_0019244 3300036401 Bacteria 6111
76 Ga0373925_0001725 3300037068 Bacteria 18385
77 Ga0373925_0037465 3300037068 Bacteria 3581
78 Ga0436364_0351767 3300037853 Unclassified 4693
79 Ga0436364_0478630 3300037853 Unclassified 2966
80 Ga0436364_0899656 3300037853 Unclassified 3160
81 Ga0436364_1102754 3300037853 Bacteria 136103
82 Ga0436364_1117179 3300037853 Bacteria 3243
83 Ga0436364_1210629 3300037853 Bacteria 7002
84 Ga0436364_1225448 3300037853 Bacteria 9973
85 Ga0436364_1514757 3300037853 Bacteria 52266
86 Ga0436365_1407879 3300039437 Bacteria 9820
87 Ga0436365_1426088 3300039437 Unclassified 4758
88 Ga0436360_0051654 3300039438 Bacteria 22866
89 Ga0436363_1410457 3300039450 Bacteria 3923
90 Ga0436362_0073594 3300039453 Bacteria 5695
91 Ga0495592_0015906 3300046454 Bacteria 5708
92 Ga0495651_0026094 3300046462 Bacteria 4549
93 Ga0495580_0000160 3300046472 Bacteria 49438
94 Ga0495580_0010965 3300046472 Bacteria 7028
95 Ga0495608_0011727 3300046511 Bacteria 6094
96 Ga0495608_0012446 3300046511 Bacteria 5904
97 Ga0495628_0003448 3300046516 Bacteria 14163
98 Ga0495630_0042319 3300046517 Bacteria 3402
99 Ga0495630_0042767 3300046517 Unclassified 3383
100 Ga0495652_0006795 3300046529 Bacteria 10604
101 Ga0495665_0001344 3300046531 Bacteria 13140
102 Ga0495640_0014958 3300046533 Bacteria 5851
103 Ga0495587_0001512 3300046536 Bacteria 15462
104 Ga0495587_0024961 3300046536 Unclassified 3658
105 Ga0495645_0027918 3300046543 Bacteria 4100
106 Ga0495635_0016657 3300046663 Bacteria 5134
107 Ga0495623_0001247 3300046679 Bacteria 17264
108 Ga0495600_0015855 3300046809 Bacteria 4773
109 Ga0495604_0009710 3300047317 Bacteria 7611
110 Ga0495674_0002008 3300047319 Bacteria 20015
111 Ga0495674_0005914 3300047319 Bacteria 11740
112 Ga0495680_0000520 3300047322 Bacteria 43589
113 Ga0495680_0002507 3300047322 Bacteria 18781
114 Ga0495680_0014746 3300047322 Bacteria 6756
115 Ga0495675_0006110 3300047444 Bacteria 7370
116 Ga0495675_0007112 3300047444 Bacteria 6886
117 Ga0495675_0034548 3300047444 Bacteria 3228
118 Ga0495684_0001376 3300047471 Bacteria 19526
119 Ga0495684_0013485 3300047471 Bacteria 6288
120 Ga0495593_0011180 3300047673 Bacteria 5160
121 Ga0501032_0006766 3300049569 Bacteria 8414
122 Ga0501038_0003506 3300049574 Bacteria 14603
123 Ga0501046_0001089 3300049580 Bacteria 26597
124 Ga0501047_0035388 3300049581 Bacteria 4824
125 Ga0501068_0001328 3300049584 Bacteria 13111
126 Ga0501069_0002181 3300049585 Bacteria 9856
127 Ga0501070_0026918 3300049586 Bacteria 4822
128 Ga0501072_0000523 3300049588 Bacteria 27564
129 Ga0501073_0000999 3300049589 Bacteria 20422
130 Ga0501074_0014928 3300049590 Bacteria 5651
131 Ga0501079_0000555 3300049741 Bacteria 24463
132 Ga0501080_0012565 3300049742 Bacteria 7764
133 nmdc:mga06r32_41317_c1 3300050510 Bacteria 4381
134 nmdc:mga08x19_17721_c1 3300050514 Unclassified 4361
135 Ga0495612_0001370 3300053078 Bacteria 10044
136 Ga0500568_0001474 3300053139 Bacteria 15089
137 Ga0501084_0000282 3300054114 Bacteria 38465
138 Ga0501082_0000810 3300060353 Bacteria 27478
139 Ga0501082_0001154 3300060353 Bacteria 23280
140 Ga0436361_0705411
141 Ga0070683_100000025
142 Ga0070680_100013438
143 Ga0070709_10010619
144 Ga0070714_100039788
145 Ga0070713_100040056
146 Ga0070711_100024370
147 Ga0070663_100027530
148 Ga0070707_100000011
149 Ga0070684_100000103
150 Ga0068855_100111337
151 Ga0070664_100022875
152 Ga0068856_100001855
153 Ga0068856_100019241
154 Ga0068856_100019999
155 Ga0068852_100002225
156 Ga0068863_100009530
157 Ga0070717_10019194
158 Ga0075431_100003728
159 Ga0075431_100028956
160 Ga0075436_100004596
161 Ga0105240_10001098
162 Ga0105240_10001466
163 Ga0105240_10084756
164 Ga0105240_10097014
165 Ga0105248_10028125
166 Ga0105248_10117661
167 Ga0105237_10021962
168 Ga0157370_10002989
169 Ga0157369_10001600
170 Ga0157369_10006677
171 Ga0157374_10003794
172 Ga0157374_10085866
173 Ga0157378_10002288
174 Ga0157372_10015176
175 Ga0157372_10026421
176 Ga0213875_10000024
177 Ga0213875_10000057
178 Ga0213875_10001227
179 Ga0213871_10000468
180 Ga0207695_10002015
181 Ga0207695_10007220
182 Ga0207695_10031208
183 Ga0207663_10008112
184 Ga0207660_10005706
185 Ga0207646_10000055
186 Ga0207664_10024227
187 Ga0207664_10025503
188 Ga0207661_10000028
189 Ga0207667_10102386
190 Ga0207702_10001949
191 Ga0207698_10001470
192 Ga0265319_1001947
193 Ga0265318_10000076
194 Ga0265323_10003130
195 Ga0265338_10011315
196 Ga0265320_10000031
197 Ga0265329_10000860
198 Ga0265340_10004116
199 Ga0265340_10017551
200 Ga0265331_10000039
201 Ga0265316_10000662
202 Ga0265316_10004520
203 Ga0265316_10020749
204 Ga0265314_10010353
205 Ga0265314_10015463
206 Ga0373926_0004886
207 Ga0373954_0022358
208 Ga0373935_0006400
209 Ga0373927_0003278
210 Ga0373927_0007236
211 Ga0373927_0017014
212 Ga0373947_0000411
213 Ga0373937_0008832
214 Ga0373937_0019244
215 Ga0373925_0001725
216 Ga0373925_0037465
217 Ga0436364_0351767
218 Ga0436364_0478630
219 Ga0436364_0899656
220 Ga0436364_1102754
221 Ga0436364_1117179
222 Ga0436364_1210629
223 Ga0436364_1225448
224 Ga0436364_1514757
225 Ga0436365_1407879
226 Ga0436365_1426088
227 Ga0436360_0051654
228 Ga0436363_1410457
229 Ga0436362_0073594
230 Ga0495592_0015906
231 Ga0495651_0026094
232 Ga0495580_0000160
233 Ga0495580_0010965
234 Ga0495608_0011727
235 Ga0495608_0012446
236 Ga0495628_0003448
237 Ga0495630_0042319
238 Ga0495630_0042767
239 Ga0495652_0006795
240 Ga0495665_0001344
241 Ga0495640_0014958
242 Ga0495587_0001512
243 Ga0495587_0024961
244 Ga0495645_0027918
245 Ga0495635_0016657
246 Ga0495623_0001247
247 Ga0495600_0015855
248 Ga0495604_0009710
249 Ga0495674_0002008
250 Ga0495674_0005914
251 Ga0495680_0000520
252 Ga0495680_0002507
253 Ga0495680_0014746
254 Ga0495675_0006110
255 Ga0495675_0007112
256 Ga0495675_0034548
257 Ga0495684_0001376
258 Ga0495684_0013485
259 Ga0495593_0011180
260 Ga0501032_0006766
261 Ga0501038_0003506
262 Ga0501046_0001089
263 Ga0501047_0035388
264 Ga0501068_0001328
265 Ga0501069_0002181
266 Ga0501070_0026918
267 Ga0501072_0000523
268 Ga0501073_0000999
269 Ga0501074_0014928
270 Ga0501079_0000555
271 Ga0501080_0012565
272 nmdc:mga06r32_41317_c1
273 nmdc:mga08x19_17721_c1
274 Ga0495612_0001370
275 Ga0500568_0001474
276 Ga0501084_0000282
277 Ga0501082_0000810
278 Ga0501082_0001154

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03699

UPF0182

Uncharacterised protein family (UPF0182)

17

780

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
7rww-assembly1.cif.gz_C crystal structure of a zn-bound ridc1 variant 0.4755 191 282
5xyu-assembly1.cif.gz_E small subunit of mycobacterium smegmatis ribosome 0.4686 367 429
3m15-assembly1.cif.gz_C a zn-mediated asymmetric trimer of a cytochrome cb562 variant (d74a-ridc1) 0.4617 186 279
4u9e-assembly1.cif.gz_A crystal structure of the zn-directed tetramer of the engineered cyt cb562 variant, a104/57g ab3 0.441 186 282
7rww-assembly1.cif.gz_C crystal structure of a zn-bound ridc1 variant 0.4261 191 282
ID Description Score Start End Superfamily
af_A0A1D6MVU8_44_196_1.20.140.40 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Invertase/pectin methylesterase inhibitor family protein 0.6301 203 292 1.20.140.40
af_I1N5T2_121_227_1.20.120.290 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle 0.6163 193 282 1.20.120.290
af_A0A1D6HWK6_24_175_1.20.140.40 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Invertase/pectin methylesterase inhibitor family protein 0.5267 193 297 1.20.140.40
af_I1N5T2_121_227_1.20.120.290 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle 0.5069 193 282 1.20.120.290
af_A0A0R0EKI7_78_225_3.40.1000.10 Alpha Beta;3-Layer(aba) Sandwich;Protein Transport Mog1p; Chain A;Mog1/PsbP, alpha/beta/alpha sandwich 0.4908 357 428 3.40.1000.10
ID Description Score Start End GO Terms
AF-A0A845C1M0-F1-model_v4 UPF0182 family protein 0.968 562 806 GO:0005576
GO:0005886
AF-A0A3C0CV68-F1-model_v4 UPF0182 family protein 0.9646 276 800 GO:0005576
GO:0005886
AF-A0A7X3W2C1-F1-model_v4 deleted 0.9608 19 605
AF-A0A3C0CV68-F1-model_v4 UPF0182 family protein 0.9592 276 800 GO:0005576
GO:0005886
AF-A0A537JBZ0-F1-model_v4 UPF0182 family protein 0.9497 414 806 GO:0005576
GO:0005886

Map