F173785

General Info

Members Datasets Scaffolds Average Seq Length
138 93 122 359

Family's Representative Sequence

Representative Sequence 3300037418|Ga0395900_0015622|Ga0395900_0015622_3159_4400
Length 413
Sequence MIATGLSVVRVAPPGPGGRGADVRRREEAVIRTSRRLADGREIIYFDDDGDARSHDARDTRDLPPVSTHSQLRYDALLGEWIAIASHRQSRTFLPPPDECPLDPSRPGRPTEIPDSSYQVVVFENRFPSLATGVDRDVPPTAPGAPLAELRPGFGRCEVVCFTDDHDRVFADLGHDRARLVVDVWADRTAELGALDGIAHVFPFENHGEEIGVTLSHPHGQIYAYPYLPPRVQTILGSVRRHRETTGGDLFAEVVDSERSGPRVVCANEHWTAFVPAAARWPYELQLFPTRRVPDIPALTDAERDAFVHVYLDVLGRFARRFDTPMPYIAAWNQAPVRDGRDEWWLHLQLFSIRRAPGKLKYLAGSESGMGAFITDTNPEDVAEQLRNVRTTGKRASQGAPATEERNEPGVEP

Samples

Sample ID Description Type Environment
1 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
2 2547132424 Nocardia nova SH22a Isolate Unclassified
3 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
4 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
5 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
6 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
7 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
8 2861520306 Phytomonospora endophytica DSM 45386 Isolate Unclassified
9 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
10 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
11 2893684298 Kocuria palustris DSM 11925 Isolate Rhizosphere
12 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
13 2920879853 Kocuria salina CV6 Isolate Unclassified
14 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
15 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
25 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
26 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
31 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
32 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
33 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
34 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
35 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
36 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
46 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
47 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
48 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
49 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
50 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
51 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
52 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
53 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
54 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
55 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
56 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
57 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
58 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
59 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
60 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
61 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
62 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
63 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
64 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
65 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
66 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
67 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
68 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
69 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
70 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
71 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
72 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
73 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
74 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
75 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
76 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
77 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
78 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
79 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
80 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
81 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
82 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
83 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
84 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
85 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
86 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
87 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
88 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
89 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
90 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
91 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
92 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
93 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 86.96
Metatranscriptomes 1.45
Isolates 11.59

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.72
Nodule 0
Rhizoplane 4.35
Rhizosphere 80.43
Stem 0
Stem Tuber 0
Unclassified 14.49

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10012694 3300003203 Bacteria 3641
2 Ga0070683_100130063 3300005329 Bacteria 2382
3 Ga0070668_100000412 3300005347 Bacteria 28441
4 Ga0070668_100013418 3300005347 Bacteria 6115
5 Ga0070685_10019940 3300005466 Bacteria 3625
6 Ga0070679_100028993 3300005530 Bacteria 5460
7 Ga0070679_100089098 3300005530 Bacteria 3072
8 Ga0070684_100096137 3300005535 Bacteria 2640
9 Ga0070684_100219512 3300005535 Bacteria 1735
10 Ga0070684_100391272 3300005535 Bacteria 1281
11 Ga0068857_100031544 3300005577 Bacteria 4684
12 Ga0068864_100310304 3300005618 Bacteria 1479
13 Ga0068863_100023288 3300005841 Bacteria 5916
14 Ga0068863_100201899 3300005841 Bacteria 1913
15 Ga0068858_100101454 3300005842 Bacteria 2684
16 Ga0081540_1007161 3300005983 Bacteria 8001
17 Ga0081539_10000678 3300005985 Bacteria 68256
18 Ga0081539_10033000 3300005985 Bacteria 3160
19 Ga0081539_10033030 3300005985 Bacteria 3158
20 Ga0081539_10100516 3300005985 Bacteria 1475
21 Ga0070712_100048851 3300006175 Bacteria 2935
22 Ga0075431_100362717 3300006847 Bacteria 1455
23 Ga0105245_10439408 3300009098 Bacteria 1311
24 Ga0114129_10393941 3300009147 Bacteria 1826
25 Ga0105248_10166550 3300009177 Bacteria 2484
26 Ga0105239_10618701 3300010375 Bacteria 1236
27 Ga0157378_10216441 3300013297 Bacteria 1819
28 Ga0157379_10098520 3300014968 Bacteria 2624
29 Ga0157379_10196020 3300014968 Bacteria 1825
30 Ga0206354_10817189 3300020081 Bacteria 3320
31 Ga0206353_11819462 3300020082 Bacteria 2038
32 Ga0207652_10136574 3300025921 Bacteria 2190
33 Ga0207664_10148620 3300025929 Bacteria 1989
34 Ga0207706_10272065 3300025933 Bacteria 1478
35 Ga0207711_10218199 3300025941 Bacteria 1744
36 Ga0207668_10000216 3300025972 Bacteria 39105
37 Ga0207658_10098114 3300025986 Bacteria 2289
38 Ga0207703_10179907 3300026035 Bacteria 1866
39 Ga0207703_10271571 3300026035 Bacteria 1536
40 Ga0207676_10026654 3300026095 Bacteria 4298
41 Ga0207674_10069922 3300026116 Bacteria 3529
42 Ga0207674_10280135 3300026116 Bacteria 1615
43 Ga0307517_10035622 3300028786 Bacteria 5629
44 Ga0307515_10009042 3300028794 Bacteria 19333
45 Ga0307515_10038716 3300028794 Bacteria 7615
46 Ga0307515_10065758 3300028794 Bacteria 5038
47 Ga0307512_10003520 3300030522 Bacteria 18095
48 Ga0307512_10031941 3300030522 Bacteria 4553
49 Ga0307512_10062394 3300030522 Bacteria 2860
50 Ga0265327_10000304 3300031251 Bacteria 95401
51 Ga0307513_10192185 3300031456 Bacteria 1892
52 Ga0307509_10010721 3300031507 Bacteria 11184
53 Ga0307408_100053027 3300031548 Bacteria 2927
54 Ga0307408_100104310 3300031548 Bacteria 2166
55 Ga0307508_10000829 3300031616 Bacteria 35940
56 Ga0307508_10142790 3300031616 Bacteria 1998
57 Ga0307516_10286044 3300031730 Bacteria 1329
58 Ga0307405_10031897 3300031731 Bacteria 3107
59 Ga0307405_10049323 3300031731 Bacteria 2601
60 Ga0307413_10060037 3300031824 Bacteria 2339
61 Ga0307413_10074430 3300031824 Bacteria 2151
62 Ga0307410_10036514 3300031852 Bacteria 3200
63 Ga0307410_10081587 3300031852 Bacteria 2272
64 Ga0307406_10133434 3300031901 Bacteria 1746
65 Ga0307406_10159046 3300031901 Bacteria 1621
66 Ga0307407_10023003 3300031903 Bacteria 3245
67 Ga0307407_10083568 3300031903 Bacteria 1937
68 Ga0307407_10092941 3300031903 Bacteria 1854
69 Ga0307412_10002252 3300031911 Bacteria 10688
70 Ga0307412_10045975 3300031911 Bacteria 2857
71 Ga0307412_10347641 3300031911 Bacteria 1189
72 Ga0307409_100044994 3300031995 Bacteria 3329
73 Ga0307409_100067916 3300031995 Bacteria 2817
74 Ga0307409_100242285 3300031995 Bacteria 1642
75 Ga0307409_100443415 3300031995 Bacteria 1251
76 Ga0307416_100044937 3300032002 Bacteria 3473
77 Ga0307416_100112129 3300032002 Bacteria 2406
78 Ga0307416_100117609 3300032002 Bacteria 2360
79 Ga0307416_100127003 3300032002 Bacteria 2286
80 Ga0307416_100377467 3300032002 Bacteria 1446
81 Ga0307416_100424722 3300032002 Bacteria 1374
82 Ga0307416_100449777 3300032002 Bacteria 1340
83 Ga0307411_10080532 3300032005 Bacteria 2239
84 Ga0307411_10126420 3300032005 Bacteria 1860
85 Ga0307411_10208603 3300032005 Bacteria 1507
86 Ga0307415_100018046 3300032126 Bacteria 4249
87 Ga0307415_100021794 3300032126 Bacteria 3945
88 Ga0307507_10050304 3300033179 Bacteria 4025
89 Ga0373951_0000116 3300035091 Bacteria 30294
90 Ga0373941_0041488 3300035115 Bacteria 1424
91 Ga0373942_0000613 3300035207 Bacteria 10008
92 Ga0373962_0003907 3300035242 Bacteria 3588
93 Ga0373935_0016911 3300035692 Bacteria 4417
94 Ga0395900_0015622 3300037418 Bacteria 7739
95 Ga0395898_0030066 3300037466 Bacteria 5439
96 Ga0395898_0132652 3300037466 Bacteria 2385
97 Ga0395901_0004049 3300038443 Bacteria 14760
98 Ga0395901_0128271 3300038443 Bacteria 2666
99 Ga0451853_0730845 3300041512 Bacteria 2310
100 Ga0466965_0131780 3300044683 Bacteria 1297
101 Ga0466963_0184185 3300044694 Bacteria 1458
102 Ga0466960_0065553 3300044901 Bacteria 1794
103 Ga0466960_0159815 3300044901 Bacteria 1209
104 Ga0466967_0016548 3300045976 Bacteria 5820
105 Ga0466967_0018293 3300045976 Bacteria 5595
106 Ga0466967_0211440 3300045976 Bacteria 1840
107 Ga0495594_0031670 3300046499 Bacteria 2868
108 Ga0495607_0086875 3300046501 Bacteria 1704
109 Ga0495606_0001404 3300046507 Bacteria 32385
110 Ga0495632_0061001 3300046519 Bacteria 1831
111 Ga0495668_0000802 3300046616 Bacteria 36169
112 Ga0495625_0002637 3300046660 Bacteria 19153
113 Ga0495683_0000772 3300047323 Bacteria 23032
114 Ga0495626_0000113 3300048091 Bacteria 105218
115 Ga0496105_0115421 3300048908 Bacteria 2215
116 Ga0496108_0000016 3300048911 Bacteria 237051
117 Ga0496108_0008948 3300048911 Bacteria 8113
118 Ga0496110_0036265 3300048913 Bacteria 4281
119 Ga0496111_0019264 3300048914 Bacteria 4737
120 Ga0496113_0007194 3300048916 Bacteria 7133
121 nmdc:mga06r32_328686_c1 3300050510 Bacteria 1514
122 Ga0500646_0001951 3300053090 Bacteria 5390

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048908 Ga0496105_0115421 Ga0496105_0115421_1198_2136 301
2 3300006847 Ga0075431_100362717 Ga0075431_1003627171 325
3 3300050510 nmdc:mga06r32_328686_c1 nmdc:mga06r32_328686_c1_128_1345 325
4 3300053090 Ga0500646_0001951 Ga0500646_0001951_253_1341 331
5 iso_pu_bacteria 2887478801 2887485828 331
6 3300031911 Ga0307412_10002252 Ga0307412_100022522 332
7 3300005618 Ga0068864_100310304 Ga0068864_1003103042 334
8 3300031548 Ga0307408_100104310 Ga0307408_1001043102 335
9 3300031731 Ga0307405_10049323 Ga0307405_100493231 335
10 3300031824 Ga0307413_10060037 Ga0307413_100600372 335
11 3300031852 Ga0307410_10081587 Ga0307410_100815872 335
12 3300031901 Ga0307406_10133434 Ga0307406_101334342 335
13 3300031903 Ga0307407_10083568 Ga0307407_100835682 335
14 3300031911 Ga0307412_10045975 Ga0307412_100459753 335
15 3300032005 Ga0307411_10080532 Ga0307411_100805321 335
16 3300032126 Ga0307415_100021794 Ga0307415_1000217945 335
17 3300046507 Ga0495606_0001404 Ga0495606_0001404_27070_28098 335
18 3300046616 Ga0495668_0000802 Ga0495668_0000802_4270_5298 335
19 3300046660 Ga0495625_0002637 Ga0495625_0002637_4282_5310 335
20 3300048091 Ga0495626_0000113 Ga0495626_0000113_90347_91375 335
21 3300031903 Ga0307407_10092941 Ga0307407_100929412 337
22 3300031911 Ga0307412_10347641 Ga0307412_103476411 338
23 3300031995 Ga0307409_100242285 Ga0307409_1002422851 338
24 3300032002 Ga0307416_100449777 Ga0307416_1004497771 338
25 3300032002 Ga0307416_100127003 Ga0307416_1001270033 339
26 3300005347 Ga0070668_100000412 Ga0070668_10000041219 341
27 3300020081 Ga0206354_10817189 Ga0206354_108171892 341
28 3300020082 Ga0206353_11819462 Ga0206353_118194623 341
29 3300025972 Ga0207668_10000216 Ga0207668_100002162 341
30 3300031548 Ga0307408_100053027 Ga0307408_1000530272 341
31 3300031731 Ga0307405_10031897 Ga0307405_100318972 341
32 3300031901 Ga0307406_10159046 Ga0307406_101590461 341
33 3300031995 Ga0307409_100044994 Ga0307409_1000449943 341
34 3300046499 Ga0495594_0031670 Ga0495594_0031670_509_1585 342
35 iso_pu_bacteria 2744054611 2744954850 342
36 3300026116 Ga0207674_10280135 Ga0207674_102801352 343
37 3300030522 Ga0307512_10062394 Ga0307512_100623942 343
38 3300031251 Ga0265327_10000304 Ga0265327_1000030457 343
39 3300032002 Ga0307416_100112129 Ga0307416_1001121291 343
40 iso_pu_bacteria 2622736605 2623501147 343
41 iso_pu_bacteria 2868088558 2868093402 343
42 iso_pu_bacteria 2515154155 2515855276 344
43 iso_pu_bacteria 2554235227 2555229335 344
44 iso_pu_bacteria 2654587600 2655034355 344
45 3300031824 Ga0307413_10074430 Ga0307413_100744301 345
46 3300031852 Ga0307410_10036514 Ga0307410_100365142 345
47 3300031903 Ga0307407_10023003 Ga0307407_100230031 345
48 3300031995 Ga0307409_100067916 Ga0307409_1000679165 345
49 3300032002 Ga0307416_100044937 Ga0307416_1000449374 345
50 3300032005 Ga0307411_10126420 Ga0307411_101264205 345
51 3300032126 Ga0307415_100018046 Ga0307415_1000180464 345
52 iso_pu_bacteria 8057568493 8057574292 345
53 3300005535 Ga0070684_100219512 Ga0070684_1002195122 346
54 3300009098 Ga0105245_10439408 Ga0105245_104394081 346
55 3300009147 Ga0114129_10393941 Ga0114129_103939412 346
56 3300010375 Ga0105239_10618701 Ga0105239_106187011 346
57 3300028794 Ga0307515_10065758 Ga0307515_100657586 346
58 3300030522 Ga0307512_10031941 Ga0307512_100319411 346
59 3300032002 Ga0307416_100377467 Ga0307416_1003774672 346
60 iso_pu_bacteria 2751185782 2753265279 346
61 3300005329 Ga0070683_100130063 Ga0070683_1001300632 347
62 3300005347 Ga0070668_100013418 Ga0070668_1000134185 347
63 3300005466 Ga0070685_10019940 Ga0070685_100199404 347
64 3300005530 Ga0070679_100089098 Ga0070679_1000890983 347
65 3300005535 Ga0070684_100096137 Ga0070684_1000961372 347
66 3300005577 Ga0068857_100031544 Ga0068857_1000315443 347
67 3300005841 Ga0068863_100023288 Ga0068863_1000232886 347
68 3300005841 Ga0068863_100201899 Ga0068863_1002018992 347
69 3300005842 Ga0068858_100101454 Ga0068858_1001014542 347
70 3300005983 Ga0081540_1007161 Ga0081540_10071616 347
71 3300005985 Ga0081539_10033000 Ga0081539_100330003 347
72 3300005985 Ga0081539_10033030 Ga0081539_100330302 347
73 3300005985 Ga0081539_10100516 Ga0081539_101005162 347
74 3300006175 Ga0070712_100048851 Ga0070712_1000488513 347
75 3300013297 Ga0157378_10216441 Ga0157378_102164413 347
76 3300014968 Ga0157379_10196020 Ga0157379_101960202 347
77 3300025929 Ga0207664_10148620 Ga0207664_101486202 347
78 3300025986 Ga0207658_10098114 Ga0207658_100981142 347
79 3300026035 Ga0207703_10179907 Ga0207703_101799072 347
80 3300026095 Ga0207676_10026654 Ga0207676_100266541 347
81 3300026116 Ga0207674_10069922 Ga0207674_100699223 347
82 3300028786 Ga0307517_10035622 Ga0307517_100356224 347
83 3300028794 Ga0307515_10009042 Ga0307515_1000904214 347
84 3300028794 Ga0307515_10038716 Ga0307515_100387163 347
85 3300030522 Ga0307512_10003520 Ga0307512_1000352016 347
86 3300031507 Ga0307509_10010721 Ga0307509_100107218 347
87 3300031730 Ga0307516_10286044 Ga0307516_102860441 347
88 3300031995 Ga0307409_100443415 Ga0307409_1004434151 347
89 3300032002 Ga0307416_100117609 Ga0307416_1001176091 347
90 3300032002 Ga0307416_100424722 Ga0307416_1004247221 347
91 3300032005 Ga0307411_10208603 Ga0307411_102086032 347
92 3300033179 Ga0307507_10050304 Ga0307507_100503042 347
93 3300035115 Ga0373941_0041488 Ga0373941_0041488_113_1201 347
94 3300035207 Ga0373942_0000613 Ga0373942_0000613_8225_9313 347
95 3300035242 Ga0373962_0003907 Ga0373962_0003907_2477_3565 347
96 3300035692 Ga0373935_0016911 Ga0373935_0016911_323_1411 347
97 3300037418 Ga0395900_0015622 Ga0395900_0015622_3159_4400 347
98 3300037466 Ga0395898_0030066 Ga0395898_0030066_3165_4244 347
99 3300038443 Ga0395901_0004049 Ga0395901_0004049_3379_4458 347
100 3300038443 Ga0395901_0128271 Ga0395901_0128271_1202_2314 347
101 3300044683 Ga0466965_0131780 Ga0466965_0131780_170_1267 347
102 3300044694 Ga0466963_0184185 Ga0466963_0184185_225_1322 347
103 3300044901 Ga0466960_0065553 Ga0466960_0065553_139_1236 347
104 3300044901 Ga0466960_0159815 Ga0466960_0159815_58_1155 347
105 3300045976 Ga0466967_0016548 Ga0466967_0016548_1215_2294 347
106 3300045976 Ga0466967_0018293 Ga0466967_0018293_2736_3827 347
107 3300045976 Ga0466967_0211440 Ga0466967_0211440_120_1217 347
108 3300046501 Ga0495607_0086875 Ga0495607_0086875_261_1367 347
109 3300046519 Ga0495632_0061001 Ga0495632_0061001_583_1674 347
110 3300047323 Ga0495683_0000772 Ga0495683_0000772_20039_21145 347
111 3300048911 Ga0496108_0000016 Ga0496108_0000016_787_1875 347
112 3300048911 Ga0496108_0008948 Ga0496108_0008948_5780_6856 347
113 3300048913 Ga0496110_0036265 Ga0496110_0036265_512_1588 347
114 3300048914 Ga0496111_0019264 Ga0496111_0019264_1020_2096 347
115 3300048916 Ga0496113_0007194 Ga0496113_0007194_4612_5688 347
116 iso_pu_bacteria 2547132424 2548694211 347
117 iso_pu_bacteria 2861520306 2861521513 347
118 iso_pu_bacteria 2919713450 2919716397 347
119 3300003203 JGI25406J46586_10012694 JGI25406J46586_100126943 348
120 3300005530 Ga0070679_100028993 Ga0070679_1000289932 348
121 3300005535 Ga0070684_100391272 Ga0070684_1003912722 348
122 3300005985 Ga0081539_10000678 Ga0081539_1000067843 348
123 3300009177 Ga0105248_10166550 Ga0105248_101665502 348
124 3300014968 Ga0157379_10098520 Ga0157379_100985202 348
125 3300025921 Ga0207652_10136574 Ga0207652_101365743 348
126 3300025933 Ga0207706_10272065 Ga0207706_102720651 348
127 3300025941 Ga0207711_10218199 Ga0207711_102181992 348
128 3300026035 Ga0207703_10271571 Ga0207703_102715712 348
129 3300031456 Ga0307513_10192185 Ga0307513_101921851 348
130 3300031616 Ga0307508_10000829 Ga0307508_100008292 348
131 3300031616 Ga0307508_10142790 Ga0307508_101427902 348
132 3300035091 Ga0373951_0000116 Ga0373951_0000116_8709_9812 348
133 3300037466 Ga0395898_0132652 Ga0395898_0132652_270_1361 348
134 3300041512 Ga0451853_0730845 Ga0451853_0730845_548_1642 348
135 iso_pu_bacteria 2554235227 2555229295 348
136 iso_pu_bacteria 2654587600 2655034414 348
137 iso_pu_bacteria 2893684298 2893686039 348
138 iso_pu_bacteria 2920879853 2920882951 348

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01087

GalP_UDP_transf

Galactose-1-phosphate uridyl transferase, N-terminal domain

61

229

0.91

PF02744

GalP_UDP_tr_C

Galactose-1-phosphate uridyl transferase, C-terminal domain

236

397

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
6k9z-assembly1.cif.gz_B structure of uridylyltransferase mutant 0.8849 37 343
6k9z-assembly1.cif.gz_A structure of uridylyltransferase mutant 0.8832 37 343
6k5z-assembly1.cif.gz_A structure of uridylyltransferase 0.8797 37 343
6k5z-assembly1.cif.gz_B structure of uridylyltransferase 0.8763 37 343
6k9z-assembly1.cif.gz_B structure of uridylyltransferase mutant 0.8652 37 343
ID Description Score Start End Superfamily
af_Q79FY3_3_179_3.30.428.10 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.958 176 342 3.30.428.10
af_Q79FY3_3_179_3.30.428.10 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.8999 176 342 3.30.428.10
1gupA01 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.8956 191 344 3.30.428.10
1hxpB01 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.8876 191 344 3.30.428.10
3ksvA01 Alpha Beta;2-Layer Sandwich;HIT family, subunit A;HIT-like 0.8401 218 306 3.30.428.10
ID Description Score Start End GO Terms
AF-A0A7Y6CLY9-F1-model_v4 deleted 0.9767 132 344
AF-A0A7K2QKP3-F1-model_v4 Galactose-1-phosphate uridylyltransferase 0.9758 173 344 GO:0005737
GO:0008108
GO:0008270
GO:0033499
AF-A0A7K0T7N1-F1-model_v4 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12) (UDP-glucose--hexose-1-phosphate uridylyltransferase) 0.9757 150 344 GO:0005737
GO:0008108
GO:0008270
GO:0033499
AF-A0A4R4XVP6-F1-model_v4 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12) 0.9751 124 344 GO:0005737
GO:0008108
GO:0008270
GO:0033499
AF-A0A3D1AUK7-F1-model_v4 Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12) 0.9731 120 344 GO:0005737
GO:0008108
GO:0008270
GO:0033499

Feature Viewer

pLDDT pTM Quality
90.28 0.91 High
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Predicted Structure (AlphaFold2)

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