F173684

General Info

Members Datasets Scaffolds Average Seq Length
138 74 276 682

Family's Representative Sequence

Representative Sequence 3300032168|Ga0316593_10003331|Ga0316593_100033311
Length 703
Sequence VETDYQLDRVRNIGIIAHIDAGKTTTTERILFYTGHTHRLGSVDDGTTVTDFMPQERERGITIQAAAITCAWGDHQINLIDTPGHIDFTAEVQRSLRVLDGGVVVFDGVAGVEPQSETVWRQANEYHVPRICFVNKMDRTGADFYRCVDMIVDRVKGNPIPIQMPYGQGDEFAGIIDLFAMELVTYGDDMGTAIERHPIPDDYQEQAEAARAEMVDKIVENDEYLTEKYLMEEEFSDDELMSALREATIKGQVQPVLCGSALKNKGVQLVLDRVVDLLPSPLDVPPVRGTHPKSEEILERGPDDDEPLAALVFKIVTDQYGRLAFTRVYSGVLKSGSQVLNSTKNERERIGRIVRMFADRREDVSEVHAGDIAAVIGLKQTFTGDTLAAINKPIILENISFPTPVIEVAVEPNSKADQDKMGIALHRLAEEDPTFKVEVDDALGQTKIAGMGELHLEVLVDRMMREYGVRAKVGRPRVAYRETITRPSRIDTTFKRQTGGAGQYARVVIEFDPMTDEEREEARLINPEGKGDFLFVDATKGGAIPKGFIPSVRKGIFEAMGGGVLAGFPVVGIKATLVDGAYHEVDSSEIAFKIAGSMCLKEGVQKAAPAILEPSMKVEVVVPDDHTGAIVGDLSARRGNIQGMQPRGQGVSTISASVPLGEMFGYATNLRNMTQGRGNFTMEFDRYTIAPQQITDMVVRGTM

Samples

Sample ID Description Type Environment
1 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
2 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
12 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
13 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
16 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
17 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
18 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
19 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
20 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
21 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
22 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
23 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
24 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
25 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
33 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
34 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
35 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
36 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
37 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
38 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
39 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
40 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
41 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
42 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
43 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
44 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
45 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
46 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
47 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
48 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
49 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
50 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
51 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
52 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
53 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
54 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
55 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
56 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
57 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
58 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
59 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
60 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
61 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
62 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
63 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
64 3300049130 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
65 3300049527 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
66 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
67 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
69 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
70 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
71 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
72 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
73 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
74 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 88.41
Metatranscriptomes 10.87
Isolates 0.72

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.45
Rhizosphere 84.06
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316593_10003331 3300032168 Bacteria 3970
2 Ga0058863_10123205 3300004799 Bacteria 6613
3 Ga0058861_10003110 3300004800 Bacteria 4167
4 Ga0070683_100139536 3300005329 Bacteria 2296
5 Ga0070713_100073945 3300005436 Bacteria 2886
6 Ga0070708_100008755 3300005445 Bacteria 8135
7 Ga0070708_100020806 3300005445 Bacteria 5539
8 Ga0070708_100046992 3300005445 Bacteria 3811
9 Ga0070706_100004391 3300005467 Bacteria 13617
10 Ga0070706_100072953 3300005467 Bacteria 3176
11 Ga0070707_100016478 3300005468 Bacteria 6934
12 Ga0070707_100028811 3300005468 Bacteria 5285
13 Ga0070698_100012734 3300005471 Bacteria 8907
14 Ga0070698_100022742 3300005471 Bacteria 6556
15 Ga0070698_100030185 3300005471 Bacteria 5623
16 Ga0070684_100026391 3300005535 Bacteria 4893
17 Ga0070697_100001520 3300005536 Bacteria 17635
18 Ga0070664_100018284 3300005564 Bacteria 5754
19 Ga0068857_100007554 3300005577 Bacteria 9358
20 Ga0068856_100024377 3300005614 Bacteria 5888
21 Ga0111539_10000374 3300009094 Bacteria 55355
22 Ga0114129_10148514 3300009147 Bacteria 3209
23 Ga0105237_10008233 3300009545 Bacteria 11320
24 Ga0157369_10018310 3300013105 Bacteria 7855
25 Ga0197907_10737863 3300020069 Bacteria 3510
26 Ga0197907_10752662 3300020069 Bacteria 3156
27 Ga0206355_1696853 3300020076 Bacteria 4839
28 Ga0206351_10325254 3300020077 Bacteria 2911
29 Ga0206350_10621269 3300020080 Bacteria 2810
30 Ga0213873_10001554 3300021358 Bacteria 3835
31 Ga0213874_10001836 3300021377 Bacteria 4457
32 Ga0207684_10000986 3300025910 Bacteria 31968
33 Ga0207684_10002160 3300025910 Bacteria 20158
34 Ga0207684_10009428 3300025910 Bacteria 8622
35 Ga0207646_10008346 3300025922 Bacteria 10394
36 Ga0207646_10018147 3300025922 Bacteria 6569
37 Ga0207700_10036454 3300025928 Bacteria 3552
38 Ga0207661_10057666 3300025944 Bacteria 3123
39 Ga0207679_10016644 3300025945 Bacteria 4884
40 Ga0207702_10018021 3300026078 Bacteria 5844
41 Ga0207674_10000612 3300026116 Bacteria 46825
42 Ga0265323_10005188 3300028653 Bacteria 5543
43 Ga0265327_10013311 3300031251 Bacteria 5471
44 Ga0316575_10000406 3300031665 Bacteria 12313
45 Ga0316579_10000140 3300031691 Bacteria 20131
46 Ga0316579_10009765 3300031691 Bacteria 4040
47 Ga0316579_10011818 3300031691 Bacteria 3722
48 Ga0316579_10015785 3300031691 Bacteria 3286
49 Ga0316579_10016158 3300031691 Bacteria 3254
50 Ga0316576_10001005 3300031727 Bacteria 14535
51 Ga0316576_10003203 3300031727 Bacteria 9539
52 Ga0316576_10008474 3300031727 Bacteria 6562
53 Ga0316576_10013705 3300031727 Bacteria 5399
54 Ga0316576_10016606 3300031727 Bacteria 4978
55 Ga0316576_10037784 3300031727 Bacteria 3458
56 Ga0316576_10049162 3300031727 Bacteria 3061
57 Ga0316578_10000360 3300031728 Bacteria 14475
58 Ga0316578_10001058 3300031728 Bacteria 10628
59 Ga0316578_10024295 3300031728 Bacteria 3399
60 Ga0316578_10047587 3300031728 Bacteria 2502
61 Ga0316577_10001297 3300031733 Bacteria 11680
62 Ga0316577_10002580 3300031733 Bacteria 8999
63 Ga0316577_10003294 3300031733 Bacteria 8138
64 Ga0316577_10008608 3300031733 Bacteria 5473
65 Ga0316577_10012890 3300031733 Bacteria 4562
66 Ga0316577_10020526 3300031733 Bacteria 3661
67 Ga0316577_10022490 3300031733 Bacteria 3500
68 Ga0316577_10042820 3300031733 Bacteria 2533
69 Ga0316583_10000224 3300032133 Bacteria 15182
70 Ga0316585_10000130 3300032137 Bacteria 14507
71 Ga0316580_10000720 3300032139 Bacteria 7969
72 Ga0316580_10009446 3300032139 Bacteria 2931
73 Ga0316593_10002290 3300032168 Bacteria 4490
74 Ga0316593_10006311 3300032168 Bacteria 3190
75 Ga0316593_10006690 3300032168 Bacteria 3127
76 Ga0316593_10016993 3300032168 Bacteria 2213
77 Ga0316596_1004582 3300033541 Bacteria 3111
78 Ga0373956_0000838 3300035119 Bacteria 12769
79 Ga0373955_0023289 3300035172 Bacteria 3153
80 Ga0316574_0000840 3300035398 Bacteria 13428
81 Ga0316574_0007381 3300035398 Bacteria 6026
82 Ga0316574_0009365 3300035398 Bacteria 5485
83 Ga0373927_0000096 3300035695 Bacteria 66297
84 Ga0316582_0002394 3300036647 Bacteria 8787
85 Ga0316582_0003465 3300036647 Bacteria 7742
86 Ga0316582_0013927 3300036647 Bacteria 4546
87 Ga0316582_0027892 3300036647 Bacteria 3416
88 Ga0316582_0032529 3300036647 Bacteria 3197
89 Ga0316582_0037541 3300036647 Bacteria 3004
90 Ga0316582_0042625 3300036647 Bacteria 2844
91 Ga0316582_0044283 3300036647 Bacteria 2797
92 Ga0316582_0063327 3300036647 Bacteria 2376
93 Ga0316584_0001415 3300036712 Bacteria 14350
94 Ga0316584_0003748 3300036712 Bacteria 9958
95 Ga0316584_0013179 3300036712 Bacteria 5846
96 Ga0316584_0018353 3300036712 Bacteria 5046
97 Ga0316584_0034071 3300036712 Bacteria 3774
98 Ga0316584_0050664 3300036712 Bacteria 3104
99 Ga0316581_0000656 3300037588 Bacteria 6958
100 Ga0316581_0014629 3300037588 Bacteria 2236
101 Ga0400484_23269 3300038725 Bacteria 6164
102 Ga0400490_38658 3300038726 Bacteria 5614
103 Ga0400490_49886 3300038726 Bacteria 96748
104 Ga0400490_61001 3300038726 Bacteria 4012
105 Ga0400485_13603 3300038735 Bacteria 43208
106 Ga0400485_13947 3300038735 Bacteria 18541
107 Ga0400485_16653 3300038735 Bacteria 3883
108 Ga0400486_06860 3300038742 Bacteria 20941
109 Ga0400486_14468 3300038742 Bacteria 8872
110 Ga0400486_25453 3300038742 Bacteria 27838
111 Ga0400483_026851 3300039062 Bacteria 3371
112 Ga0400483_163500 3300039062 Bacteria 5383
113 Ga0400489_38077 3300039093 Bacteria 3975
114 Ga0400489_85059 3300039093 Bacteria 46511
115 Ga0400487_38734 3300039110 Bacteria 7680
116 Ga0436363_0206426 3300039450 Bacteria 19221
117 Ga0436363_0410382 3300039450 Bacteria 3095
118 Ga0436363_1005031 3300039450 Bacteria 10620
119 Ga0466969_0028942 3300044656 Bacteria 2831
120 Ga0466966_0029503 3300044684 Bacteria 3568
121 Ga0453684_0002726 3300044712 Bacteria 41828
122 Ga0453684_0068591 3300044712 Bacteria 4502
123 Ga0453684_0084270 3300044712 Bacteria 3954
124 Ga0451576_0002436 3300045051 Bacteria 27799
125 Ga0451576_0006001 3300045051 Bacteria 15022
126 Ga0496104_0121759 3300048907 Bacteria 2505
127 Ga0496112_0020104 3300048915 Bacteria 6321
128 Ga0501310_000663 3300049130 Bacteria 3028
129 Ga0501311_000012 3300049527 Bacteria 7338
130 Ga0501034_0009708 3300049571 Bacteria 10064
131 Ga0501037_0025896 3300049573 Bacteria 4332
132 Ga0501075_0001799 3300049591 Bacteria 14113
133 Ga0501079_0015897 3300049741 Bacteria 5753
134 Ga0501044_0096114 3300049823 Bacteria 2985
135 nmdc:mga05p37_158469_c1 3300050507 Bacteria 2765
136 nmdc:mga08y16_35252_c1 3300050511 Bacteria 5255
137 Ga0530510_0013393 3300061734 Bacteria 5765
138 2740991151 2740891818 Bacteria 6711283
139 Ga0316593_10003331
140 Ga0058863_10123205
141 Ga0058861_10003110
142 Ga0070683_100139536
143 Ga0070713_100073945
144 Ga0070708_100008755
145 Ga0070708_100020806
146 Ga0070708_100046992
147 Ga0070706_100004391
148 Ga0070706_100072953
149 Ga0070707_100016478
150 Ga0070707_100028811
151 Ga0070698_100012734
152 Ga0070698_100022742
153 Ga0070698_100030185
154 Ga0070684_100026391
155 Ga0070697_100001520
156 Ga0070664_100018284
157 Ga0068857_100007554
158 Ga0068856_100024377
159 Ga0111539_10000374
160 Ga0114129_10148514
161 Ga0105237_10008233
162 Ga0157369_10018310
163 Ga0197907_10737863
164 Ga0197907_10752662
165 Ga0206355_1696853
166 Ga0206351_10325254
167 Ga0206350_10621269
168 Ga0213873_10001554
169 Ga0213874_10001836
170 Ga0207684_10000986
171 Ga0207684_10002160
172 Ga0207684_10009428
173 Ga0207646_10008346
174 Ga0207646_10018147
175 Ga0207700_10036454
176 Ga0207661_10057666
177 Ga0207679_10016644
178 Ga0207702_10018021
179 Ga0207674_10000612
180 Ga0265323_10005188
181 Ga0265327_10013311
182 Ga0316575_10000406
183 Ga0316579_10000140
184 Ga0316579_10009765
185 Ga0316579_10011818
186 Ga0316579_10015785
187 Ga0316579_10016158
188 Ga0316576_10001005
189 Ga0316576_10003203
190 Ga0316576_10008474
191 Ga0316576_10013705
192 Ga0316576_10016606
193 Ga0316576_10037784
194 Ga0316576_10049162
195 Ga0316578_10000360
196 Ga0316578_10001058
197 Ga0316578_10024295
198 Ga0316578_10047587
199 Ga0316577_10001297
200 Ga0316577_10002580
201 Ga0316577_10003294
202 Ga0316577_10008608
203 Ga0316577_10012890
204 Ga0316577_10020526
205 Ga0316577_10022490
206 Ga0316577_10042820
207 Ga0316583_10000224
208 Ga0316585_10000130
209 Ga0316580_10000720
210 Ga0316580_10009446
211 Ga0316593_10002290
212 Ga0316593_10006311
213 Ga0316593_10006690
214 Ga0316593_10016993
215 Ga0316596_1004582
216 Ga0373956_0000838
217 Ga0373955_0023289
218 Ga0316574_0000840
219 Ga0316574_0007381
220 Ga0316574_0009365
221 Ga0373927_0000096
222 Ga0316582_0002394
223 Ga0316582_0003465
224 Ga0316582_0013927
225 Ga0316582_0027892
226 Ga0316582_0032529
227 Ga0316582_0037541
228 Ga0316582_0042625
229 Ga0316582_0044283
230 Ga0316582_0063327
231 Ga0316584_0001415
232 Ga0316584_0003748
233 Ga0316584_0013179
234 Ga0316584_0018353
235 Ga0316584_0034071
236 Ga0316584_0050664
237 Ga0316581_0000656
238 Ga0316581_0014629
239 Ga0400484_23269
240 Ga0400490_38658
241 Ga0400490_49886
242 Ga0400490_61001
243 Ga0400485_13603
244 Ga0400485_13947
245 Ga0400485_16653
246 Ga0400486_06860
247 Ga0400486_14468
248 Ga0400486_25453
249 Ga0400483_026851
250 Ga0400483_163500
251 Ga0400489_38077
252 Ga0400489_85059
253 Ga0400487_38734
254 Ga0436363_0206426
255 Ga0436363_0410382
256 Ga0436363_1005031
257 Ga0466969_0028942
258 Ga0466966_0029503
259 Ga0453684_0002726
260 Ga0453684_0068591
261 Ga0453684_0084270
262 Ga0451576_0002436
263 Ga0451576_0006001
264 Ga0496104_0121759
265 Ga0496112_0020104
266 Ga0501310_000663
267 Ga0501311_000012
268 Ga0501034_0009708
269 Ga0501037_0025896
270 Ga0501075_0001799
271 Ga0501079_0015897
272 Ga0501044_0096114
273 nmdc:mga05p37_158469_c1
274 nmdc:mga08y16_35252_c1
275 Ga0530510_0013393
276 2740991151

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF14492

EFG_III

Elongation Factor G, domain III

401

475

0.98

PF00679

EFG_C

Elongation factor G C-terminus

610

698

0.97

PF03144

GTP_EFTU_D2

Elongation factor Tu domain 2

321

388

0.96

PF03764

EFG_IV

Elongation factor G, domain IV

476

608

0.96

PF00009

GTP_EFTU

Elongation factor Tu GTP binding domain

8

280

0.95

PF22042

EF-G_D2

Elongation factor G domain 2

307

390

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
7oya-assembly1.cif.gz_v2 cryo-em structure of the 1 hpf zebrafish embryo 80s ribosome 0.8986 576 646
6q2d-assembly1.cif.gz_F crystal structure of methanobrevibacter smithii dph2 in complex with methanobrevibacter smithii elongation factor 2 0.8475 376 660
6lkq-assembly1.cif.gz_v the structural basis for inhibition of ribosomal translocation by viomycin 0.8445 7 445
6n0i-assembly1.cif.gz_A 2.60 angstrom resolution crystal structure of elongation factor g 2 from pseudomonas putida. 0.8424 1 659
5ty0-assembly1.cif.gz_A 2.22 angstrom crystal structure of n-terminal fragment (residues 1-419) of elongation factor g from legionella pneumophila. 0.8422 6 369
ID Description Score Start End Superfamily
af_Q9USZ1_675_770_3.30.70.240 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.991 572 661 3.30.70.240
af_A0A0R0KAP7_457_568_3.30.70.240 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits; 0.9781 569 648 3.30.70.240
af_A0A096QR66_464_537_3.30.70.870 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Elongation Factor G (Translational Gtpase), domain 3 0.9779 381 450 3.30.70.870
af_Q969S9_492_565_3.30.70.870 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Elongation Factor G (Translational Gtpase), domain 3 0.9756 381 451 3.30.70.870
af_C6KSM4_489_601_2.40.30.10 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;Translation factors 0.9744 278 372 2.40.30.10
ID Description Score Start End GO Terms
AF-A0A227J114-F1-model_v4 Elongation factor EFG domain-containing protein 0.9938 569 651 GO:0003746
GO:0005525
GO:0017111
GO:0032790
AF-A0A383ELU8-F1-model_v4 Elongation factor EFG domain-containing protein 0.9921 493 659 GO:0005525
GO:0032790
AF-A0A139PLA6-F1-model_v4 Translation elongation factor G 0.9884 576 661 GO:0003746
GO:0005525
GO:0032790
AF-A0A7Y3MD58-F1-model_v4 Elongation factor G 0.9852 449 658 GO:0003746
GO:0005525
GO:0017111
GO:0032790
AF-A0A183I988-F1-model_v4 EFG_C domain-containing protein 0.9829 576 661 GO:0003746
GO:0003924
GO:0005739
GO:0070125

Map