F171133

General Info

Members Datasets Scaffolds Average Seq Length
137 104 108 385

Family's Representative Sequence

Representative Sequence 3300048929|Ga0496126_0004253|Ga0496126_0004253_6373_7608
Length 395
Sequence MTASYVYDAVRTPFGRAGGALASVRPDDLAALVMAAAVERTGLDPARIDDVIFGDANQAGEDNRNVARFGALLAGFPTTVTGTTVNRLCASSLEAVIQGSRAIEAGDAEIVLAGGVESMSRAPYVVEKAAKPFAAVGNSTMWNTAIGWRMTNPVLPKPWTISNGESAEKIAREWGITREAQDAFAVRSHQRAASAWQAGVFDGEIVTVPGVALARDESIRDDTSVEKLAGLKALFAADGQGSVTAGNSSPINDGASAVLIGGEGVLDAEPLARIAGRAAHGVDPDVFPIAPIEAANKALARAGKTWADVDFVELNEAFASQSLACLAGWPDLDPEKLNVHGGALAIGHPLGASGGRIIGRAAHELARRGSGRSGGVAVVAICIGVGQGLAVVLER

Samples

Sample ID Description Type Environment
1 2585428157 Microbacterium sp. CF335 Isolate Rhizosphere
2 2643221566 Microbacterium sp. Root166 Isolate Unclassified
3 2643221575 Microbacterium sp. Root61 Isolate Unclassified
4 2643221597 Microbacterium sp. Root180 Isolate Unclassified
5 2751185788 Curtobacterium pusillum AA3 Isolate Unclassified
6 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
7 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
8 2811994872 Microbacterium sp. MU4Y-5-1 Isolate Unclassified
9 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
10 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
11 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
12 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
13 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
14 2906799679 Microbacterium karelineae TRM80801 Isolate Unclassified
15 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
16 2939657138 Conyzicola nivalis 2857 Isolate Rhizosphere
17 2939660829 Mycetocola sp. 2940 Isolate Rhizosphere
18 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
19 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
20 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
21 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
22 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
23 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
24 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
25 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
26 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
27 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
28 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
29 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
30 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
31 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
35 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
36 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
37 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
38 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
39 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
47 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
48 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
49 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
50 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
51 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
52 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
53 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
54 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
55 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
56 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
57 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
58 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
59 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
60 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
61 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
62 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
63 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
64 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
65 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
66 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
67 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
68 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
69 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
70 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
71 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
72 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
73 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
74 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
75 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
76 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
77 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
78 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
79 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
80 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
81 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
82 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
83 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
84 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
85 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
86 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
87 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
88 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
89 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
90 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
91 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
92 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
93 3300059477 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 50R_CW_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
94 3300059493 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 19R_SW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
95 3300059508 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 53R_CD_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
96 3300059511 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 56R_CD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
97 3300059512 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 57R_AW_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
98 3300059513 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 59R_AW_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
99 3300059623 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 66R_SW_T2_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
100 3300059648 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 65R_SW_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
101 3300060346 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 169R_CW_T3_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
102 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
103 8055034563 Leucobacter allii H21R-40 Isolate Rhizosphere
104 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 72.26
Metatranscriptomes 6.57
Isolates 21.17

Biome Distribution

Category Percentage (%)
Aerial Root 0.73
Bulb 0
Endosphere 14.6
Nodule 0
Rhizoplane 2.19
Rhizosphere 50.36
Stem 0
Stem Tuber 0
Unclassified 32.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10000585 3300005327 Bacteria 31601
2 Ga0070660_100172365 3300005339 Bacteria 1748
3 Ga0070659_100098710 3300005366 Bacteria 2348
4 Ga0070667_100063913 3300005367 Bacteria 3121
5 Ga0070663_100021980 3300005455 Bacteria 4254
6 Ga0070672_100034440 3300005543 Bacteria 3843
7 Ga0070665_100235811 3300005548 Bacteria 1830
8 Ga0068855_100040173 3300005563 Bacteria 5553
9 Ga0068855_100083400 3300005563 Bacteria 3702
10 Ga0075365_10044778 3300006038 Bacteria 2901
11 Ga0075365_10079769 3300006038 Bacteria 2215
12 Ga0075369_10012107 3300006186 Bacteria 3403
13 Ga0105244_10026361 3300009036 Bacteria 3147
14 Ga0105248_10000710 3300009177 Bacteria 37689
15 Ga0157374_10139663 3300013296 Bacteria 2351
16 Ga0207647_10027736 3300025904 Bacteria 3688
17 Ga0207705_10000001 3300025909 Bacteria 2061880
18 Ga0207671_10095018 3300025914 Bacteria 2250
19 Ga0207657_10077780 3300025919 Bacteria 2795
20 Ga0207711_10000398 3300025941 Bacteria 45914
21 Ga0207667_10020919 3300025949 Bacteria 7257
22 Ga0207658_10048368 3300025986 Bacteria 3118
23 Ga0307515_10113147 3300028794 Bacteria 3150
24 Ga0316575_10000001 3300031665 Bacteria 151281
25 Ga0307406_10003013 3300031901 Bacteria 9165
26 Ga0307416_100308425 3300032002 Bacteria 1578
27 Ga0307414_10071307 3300032004 Bacteria 2506
28 Ga0451793_0743445 3300041452 Bacteria 1910
29 Ga0495592_0068220 3300046454 Bacteria 2597
30 Ga0495651_0039011 3300046462 Bacteria 3698
31 Ga0495650_0000321 3300046471 Bacteria 85831
32 Ga0495628_0016705 3300046516 Bacteria 6119
33 Ga0495634_0100578 3300046642 Bacteria 1868
34 Ga0495635_0070117 3300046663 Bacteria 2403
35 Ga0495613_0004983 3300046689 Bacteria 9974
36 Ga0495604_0054211 3300047317 Bacteria 3095
37 Ga0495680_0009049 3300047322 Bacteria 8995
38 Ga0496105_0087356 3300048908 Bacteria 2576
39 Ga0496110_0412347 3300048913 Bacteria 1232
40 Ga0496116_0028535 3300048919 Bacteria 4040
41 Ga0496117_0000014 3300048920 Bacteria 584427
42 Ga0496117_0003220 3300048920 Bacteria 19285
43 Ga0496117_0039487 3300048920 Bacteria 3483
44 Ga0496118_0003344 3300048921 Bacteria 20296
45 Ga0496118_0060933 3300048921 Bacteria 2798
46 Ga0496119_0000540 3300048922 Bacteria 51531
47 Ga0496119_0002981 3300048922 Bacteria 17971
48 Ga0496119_0006502 3300048922 Bacteria 10792
49 Ga0496119_0006911 3300048922 Bacteria 10354
50 Ga0496120_0002946 3300048923 Bacteria 16217
51 Ga0496120_0010083 3300048923 Bacteria 6626
52 Ga0496120_0026537 3300048923 Bacteria 3575
53 Ga0496120_0044429 3300048923 Bacteria 2581
54 Ga0496121_0000015 3300048924 Bacteria 571958
55 Ga0496122_0000475 3300048925 Bacteria 83356
56 Ga0496122_0004103 3300048925 Bacteria 18452
57 Ga0496122_0032992 3300048925 Bacteria 4267
58 Ga0496122_0194263 3300048925 Bacteria 1194
59 Ga0496123_0000011 3300048926 Bacteria 493925
60 Ga0496123_0010681 3300048926 Bacteria 8080
61 Ga0496124_0000899 3300048927 Bacteria 48070
62 Ga0496124_0033239 3300048927 Bacteria 4538
63 Ga0496125_0002305 3300048928 Bacteria 25185
64 Ga0496125_0021876 3300048928 Bacteria 5951
65 Ga0496125_0037694 3300048928 Bacteria 4200
66 Ga0496126_0004253 3300048929 Bacteria 17238
67 Ga0496126_0008594 3300048929 Bacteria 10994
68 Ga0501034_0022746 3300049571 Bacteria 6385
69 Ga0501034_0046732 3300049571 Bacteria 4374
70 Ga0501034_0101419 3300049571 Bacteria 2872
71 Ga0501034_0127201 3300049571 Bacteria 2533
72 Ga0501034_0129648 3300049571 Bacteria 2506
73 Ga0501034_0161364 3300049571 Bacteria 2212
74 Ga0501043_0017124 3300049579 Bacteria 5683
75 Ga0501046_0099366 3300049580 Bacteria 2234
76 Ga0501047_0016067 3300049581 Bacteria 7139
77 Ga0501070_0011978 3300049586 Bacteria 7320
78 Ga0501070_0043968 3300049586 Bacteria 3717
79 Ga0501070_0063819 3300049586 Bacteria 3051
80 Ga0501073_0000012 3300049589 Bacteria 161319
81 Ga0501080_0000025 3300049742 Bacteria 89908
82 Ga0501080_0006996 3300049742 Bacteria 10185
83 nmdc:mga00v17_16692_c1 3300050491 Bacteria 4141
84 nmdc:mga0yw44_127772_c1 3300050492 Bacteria 1643
85 nmdc:mga0yw44_224186_c1 3300050492 Bacteria 1247
86 nmdc:mga0yw44_79929_c1 3300050492 Bacteria 2047
87 nmdc:mga06z11_155930_c1 3300050494 Bacteria 1302
88 nmdc:mga0sz30_12215_c1 3300050516 Bacteria 3336
89 Ga0500556_0000059 3300053104 Bacteria 112837
90 Ga0500556_0000206 3300053104 Bacteria 48470
91 Ga0500562_024423 3300053108 Bacteria 1580
92 Ga0500592_012943 3300053116 Bacteria 1336
93 Ga0500593_025530 3300053117 Bacteria 2627
94 Ga0500655_000356 3300053133 Bacteria 9868
95 Ga0500559_0000454 3300053136 Bacteria 29202
96 Ga0500568_0000012 3300053139 Bacteria 225711
97 Ga0500616_0000090 3300053153 Bacteria 187734
98 Ga0500616_0000109 3300053153 Bacteria 152604
99 Ga0500616_0005910 3300053153 Bacteria 8181
100 Ga0587084_000001 3300059477 Bacteria 25091
101 Ga0587077_000092 3300059493 Bacteria 4979
102 Ga0587088_007121 3300059508 Bacteria 1534
103 Ga0587091_000066 3300059511 Bacteria 5526
104 Ga0587092_000100 3300059512 Bacteria 4986
105 Ga0587094_001383 3300059513 Bacteria 2274
106 Ga0587101_000020 3300059623 Bacteria 7554
107 Ga0587100_000022 3300059648 Bacteria 4978
108 Ga0587111_0000196 3300060346 Bacteria 4757

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300048913 Ga0496110_0412347 Ga0496110_0412347_28_993 320
2 3300053116 Ga0500592_012943 Ga0500592_012943_19_1176 359
3 3300049589 Ga0501073_0000012 Ga0501073_0000012_81957_83126 360
4 iso_pu_bacteria 2977264416 2977264840 361
5 iso_pu_bacteria 8055037949 8055039611 361
6 3300049571 Ga0501034_0101419 Ga0501034_0101419_1105_2274 363
7 3300005548 Ga0070665_100235811 Ga0070665_1002358112 364
8 3300048929 Ga0496126_0008594 Ga0496126_0008594_7958_9127 365
9 3300049571 Ga0501034_0022746 Ga0501034_0022746_1293_2462 367
10 3300049571 Ga0501034_0129648 Ga0501034_0129648_69_1220 368
11 3300053153 Ga0500616_0000109 Ga0500616_0000109_76294_77478 368
12 3300032004 Ga0307414_10071307 Ga0307414_100713072 369
13 3300049571 Ga0501034_0046732 Ga0501034_0046732_1070_2236 371
14 3300049571 Ga0501034_0127201 Ga0501034_0127201_1117_2283 371
15 3300046471 Ga0495650_0000321 Ga0495650_0000321_81102_82289 373
16 3300025914 Ga0207671_10095018 Ga0207671_100950182 374
17 3300053104 Ga0500556_0000206 Ga0500556_0000206_44812_45981 374
18 3300053108 Ga0500562_024423 Ga0500562_024423_231_1400 374
19 3300053117 Ga0500593_025530 Ga0500593_025530_667_1836 374
20 3300048925 Ga0496122_0194263 Ga0496122_0194263_12_1181 376
21 3300006186 Ga0075369_10012107 Ga0075369_100121073 377
22 3300028794 Ga0307515_10113147 Ga0307515_101131472 378
23 3300031665 Ga0316575_10000001 Ga0316575_1000000123 378
24 3300053136 Ga0500559_0000454 Ga0500559_0000454_2590_3756 378
25 iso_pu_bacteria 2852646457 2852649081 383
26 iso_pu_bacteria 2585428157 2588107352 384
27 iso_pu_bacteria 2643221566 2643846755 384
28 iso_pu_bacteria 2643221566 2643847595 384
29 iso_pu_bacteria 2643221575 2643887903 384
30 iso_pu_bacteria 2643221597 2643996835 384
31 iso_pu_bacteria 2751185788 2753303329 384
32 iso_pu_bacteria 2757320536 2758225251 384
33 iso_pu_bacteria 2808606447 2809226086 384
34 iso_pu_bacteria 2811994872 2812324989 384
35 iso_pu_bacteria 2821268502 2821271517 384
36 iso_pu_bacteria 2833709550 2833712246 384
37 iso_pu_bacteria 2852632344 2852632376 384
38 iso_pu_bacteria 2904509784 2904510995 384
39 iso_pu_bacteria 2906799679 2906802412 384
40 iso_pu_bacteria 2908678064 2908679378 384
41 iso_pu_bacteria 2939657138 2939660314 384
42 iso_pu_bacteria 2945968032 2945969422 384
43 iso_pu_bacteria 2946080515 2946082127 384
44 iso_pu_bacteria 2974294766 2974295655 384
45 iso_pu_bacteria 2974324384 2974324542 384
46 iso_pu_bacteria 2977228692 2977229080 384
47 iso_pu_bacteria 2977236895 2977238889 384
48 iso_pu_bacteria 2984542743 2984543327 384
49 iso_pu_bacteria 8016254467 8016255645 384
50 iso_pu_bacteria 8055034563 8055034799 384
51 iso_pu_bacteria 2939660829 2939661477 386
52 3300005367 Ga0070667_100063913 Ga0070667_1000639134 388
53 3300006038 Ga0075365_10044778 Ga0075365_100447782 388
54 3300006038 Ga0075365_10079769 Ga0075365_100797691 388
55 3300009036 Ga0105244_10026361 Ga0105244_100263613 388
56 3300025904 Ga0207647_10027736 Ga0207647_100277364 388
57 3300025986 Ga0207658_10048368 Ga0207658_100483684 388
58 3300031901 Ga0307406_10003013 Ga0307406_100030136 388
59 3300032002 Ga0307416_100308425 Ga0307416_1003084251 388
60 3300041452 Ga0451793_0743445 Ga0451793_0743445_308_1474 388
61 3300046454 Ga0495592_0068220 Ga0495592_0068220_815_1981 388
62 3300046462 Ga0495651_0039011 Ga0495651_0039011_142_1308 388
63 3300046516 Ga0495628_0016705 Ga0495628_0016705_3448_4614 388
64 3300046642 Ga0495634_0100578 Ga0495634_0100578_85_1251 388
65 3300046663 Ga0495635_0070117 Ga0495635_0070117_893_2059 388
66 3300046689 Ga0495613_0004983 Ga0495613_0004983_3485_4651 388
67 3300047317 Ga0495604_0054211 Ga0495604_0054211_1406_2572 388
68 3300047322 Ga0495680_0009049 Ga0495680_0009049_1322_2488 388
69 3300048908 Ga0496105_0087356 Ga0496105_0087356_1180_2349 388
70 3300048919 Ga0496116_0028535 Ga0496116_0028535_1017_2186 388
71 3300048920 Ga0496117_0000014 Ga0496117_0000014_194599_195774 388
72 3300048920 Ga0496117_0003220 Ga0496117_0003220_12696_13865 388
73 3300048920 Ga0496117_0039487 Ga0496117_0039487_910_2079 388
74 3300048921 Ga0496118_0003344 Ga0496118_0003344_15482_16651 388
75 3300048921 Ga0496118_0060933 Ga0496118_0060933_986_2155 388
76 3300048922 Ga0496119_0000540 Ga0496119_0000540_46208_47380 388
77 3300048922 Ga0496119_0002981 Ga0496119_0002981_4333_5508 388
78 3300048922 Ga0496119_0006502 Ga0496119_0006502_9063_10238 388
79 3300048922 Ga0496119_0006911 Ga0496119_0006911_7516_8685 388
80 3300048923 Ga0496120_0002946 Ga0496120_0002946_8157_9332 388
81 3300048923 Ga0496120_0010083 Ga0496120_0010083_3536_4711 388
82 3300048923 Ga0496120_0026537 Ga0496120_0026537_1291_2463 388
83 3300048923 Ga0496120_0044429 Ga0496120_0044429_1149_2318 388
84 3300048924 Ga0496121_0000015 Ga0496121_0000015_11044_12216 388
85 3300048925 Ga0496122_0000475 Ga0496122_0000475_27364_28533 388
86 3300048925 Ga0496122_0004103 Ga0496122_0004103_5178_6353 388
87 3300048925 Ga0496122_0032992 Ga0496122_0032992_1097_2266 388
88 3300048926 Ga0496123_0000011 Ga0496123_0000011_465391_466560 388
89 3300048926 Ga0496123_0010681 Ga0496123_0010681_515_1690 388
90 3300048927 Ga0496124_0000899 Ga0496124_0000899_19539_20708 388
91 3300048927 Ga0496124_0033239 Ga0496124_0033239_2145_3320 388
92 3300048928 Ga0496125_0002305 Ga0496125_0002305_1219_2394 388
93 3300048928 Ga0496125_0021876 Ga0496125_0021876_767_1936 388
94 3300048928 Ga0496125_0037694 Ga0496125_0037694_2171_3340 388
95 3300048929 Ga0496126_0004253 Ga0496126_0004253_6373_7608 388
96 3300049571 Ga0501034_0161364 Ga0501034_0161364_149_1318 388
97 3300049586 Ga0501070_0043968 Ga0501070_0043968_1901_3070 388
98 3300050492 nmdc:mga0yw44_127772_c1 nmdc:mga0yw44_127772_c1_367_1533 388
99 3300050492 nmdc:mga0yw44_224186_c1 nmdc:mga0yw44_224186_c1_49_1218 388
100 3300050492 nmdc:mga0yw44_79929_c1 nmdc:mga0yw44_79929_c1_774_1943 388
101 3300050494 nmdc:mga06z11_155930_c1 nmdc:mga06z11_155930_c1_43_1212 388
102 3300050516 nmdc:mga0sz30_12215_c1 nmdc:mga0sz30_12215_c1_1170_2339 388
103 3300053104 Ga0500556_0000059 Ga0500556_0000059_94257_95423 388
104 3300053139 Ga0500568_0000012 Ga0500568_0000012_94332_95498 388
105 3300053153 Ga0500616_0000090 Ga0500616_0000090_88766_89935 388
106 3300053153 Ga0500616_0005910 Ga0500616_0005910_4978_6153 388
107 3300059477 Ga0587084_000001 Ga0587084_000001_150_1319 388
108 3300059493 Ga0587077_000092 Ga0587077_000092_153_1322 388
109 3300059508 Ga0587088_007121 Ga0587088_007121_215_1384 388
110 3300059511 Ga0587091_000066 Ga0587091_000066_711_1880 388
111 3300059512 Ga0587092_000100 Ga0587092_000100_160_1329 388
112 3300059513 Ga0587094_001383 Ga0587094_001383_955_2124 388
113 3300059623 Ga0587101_000020 Ga0587101_000020_6235_7404 388
114 3300059648 Ga0587100_000022 Ga0587100_000022_152_1321 388
115 3300060346 Ga0587111_0000196 Ga0587111_0000196_3438_4607 388
116 3300005543 Ga0070672_100034440 Ga0070672_1000344405 389
117 3300009177 Ga0105248_10000710 Ga0105248_1000071026 389
118 3300013296 Ga0157374_10139663 Ga0157374_101396632 389
119 3300025941 Ga0207711_10000398 Ga0207711_1000039826 389
120 3300049579 Ga0501043_0017124 Ga0501043_0017124_4278_5447 389
121 3300049580 Ga0501046_0099366 Ga0501046_0099366_99_1268 389
122 3300049581 Ga0501047_0016067 Ga0501047_0016067_2559_3728 389
123 3300049586 Ga0501070_0011978 Ga0501070_0011978_1370_2539 389
124 3300049586 Ga0501070_0063819 Ga0501070_0063819_124_1293 389
125 3300049742 Ga0501080_0000025 Ga0501080_0000025_16688_17857 389
126 3300049742 Ga0501080_0006996 Ga0501080_0006996_4418_5602 389
127 3300050491 nmdc:mga00v17_16692_c1 nmdc:mga00v17_16692_c1_957_2126 389
128 3300053133 Ga0500655_000356 Ga0500655_000356_5237_6406 389
129 3300005327 Ga0070658_10000585 Ga0070658_100005853 390
130 3300005339 Ga0070660_100172365 Ga0070660_1001723651 390
131 3300005366 Ga0070659_100098710 Ga0070659_1000987102 390
132 3300005455 Ga0070663_100021980 Ga0070663_1000219803 390
133 3300005563 Ga0068855_100040173 Ga0068855_1000401737 390
134 3300005563 Ga0068855_100083400 Ga0068855_1000834001 390
135 3300025909 Ga0207705_10000001 Ga0207705_1000000158 390
136 3300025919 Ga0207657_10077780 Ga0207657_100777802 390
137 3300025949 Ga0207667_10020919 Ga0207667_100209191 390

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02803

Thiolase_C

Thiolase, C-terminal domain

268

395

0.94

PF00108

Thiolase_N

Thiolase, N-terminal domain

4

264

0.92

PF00109

ketoacyl-synt

Beta-ketoacyl synthase, N-terminal domain

79

140

0.84

Structural Annotation

Top 5 Hits

ID Description Score Start End
7vtr-assembly1.cif.gz_C-2 3-ketoacyl-coa thiolase tfu_0875 0.9446 1 390
7vtr-assembly1.cif.gz_C-2 3-ketoacyl-coa thiolase tfu_0875 0.9422 1 390
4e1l-assembly1.cif.gz_C crystal structure of acetoacetyl-coa thiolase (thla2) from clostridium difficile 0.9357 1 390
6pcd-assembly1.cif.gz_B crystal structure of beta-ketoadipyl-coa thiolase mutant (c90s-h356a) in complex octanoyl coenzyme a 0.9318 1 390
6pca-assembly1.cif.gz_C crystal structure of beta-ketoadipyl-coa thiolase 0.931 1 390
ID Description Score Start End Superfamily
af_A0A096MJY8_281_393_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9727 274 385 3.40.47.10
3svkB02 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9673 164 387 3.40.47.10
af_P76461_265_393_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9651 268 390 3.40.47.10
af_O53871_287_399_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9632 274 385 3.40.47.10
af_A0A0G2KML7_1_235_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9531 164 390 3.40.47.10
ID Description Score Start End GO Terms
AF-A0A7K2NPU6-F1-model_v4 3-oxoadipyl-CoA thiolase 0.9932 268 390 GO:0003988
GO:0006635
GO:0010124
AF-A0A429IN93-F1-model_v4 3-oxoadipyl-CoA thiolase 0.9921 268 390 GO:0003988
GO:0006635
GO:0010124
AF-A0A429IN93-F1-model_v4 3-oxoadipyl-CoA thiolase 0.9841 268 390 GO:0003988
GO:0006635
GO:0010124
AF-A0A3C1SY02-F1-model_v4 Acetyl-CoA C-acyltransferase (EC 2.3.1.9) 0.9683 10 117 GO:0003985
AF-A0A7J7UHM8-F1-model_v4 Acetyl-CoA acyltransferase 1 0.9668 267 389 GO:0003988
GO:0005777
GO:0006635
GO:0010124
GO:0016020

Feature Viewer

pLDDT pTM Quality
88.41 0.9 High
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Predicted Structure (AlphaFold2)

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