F170511

General Info

Members Datasets Scaffolds Average Seq Length
137 77 274 484

Family's Representative Sequence

Representative Sequence 3300035692|Ga0373935_0036863|Ga0373935_0036863_1098_2618
Length 506
Sequence MNYEAVIGLEVHVQVKTRSKIFTRVGAGYGYPPNTLTNEVVLALPGTLPVMNKAALDAIIKAGLLLGCEIAPVCKWDRKNYFYPDSPKNYQISQYDQPICVGGSVEIELPGAARNIMGEHKKIPLTRIHLEEDVGKLNHGANDSLVDYNRAGTPLMEIVSDPAMHTAEEAYAYLTSLRATMIYGGISDCDMEKGQLRCDANISIRPVGEAKLGVKVELKNLNSISFVRDGIAHEIKRQMLVLERGGTIVQETRDYDGMTGTSQSLRSKEMAHDYRYFPDPDLMPVTVDGAWKQRLAAECPELPFDKQRRFMADYQLPYTLTSALVWDRALADYFEEAAKLSGKPQAVGNWIVNDLLRELGRGGSTVGQSLSLPSESVAGLKPAPQPSTLATCKVRPAHIAALVQLVDSGAVLTNAAKEIFIEMFATGDQPGAIADRKGLKAAPTDSNELEQWCRDSIAANPKALAEFKSGKDSAINAFKGPIMKAAKGKANPKLVDETLRKLLAAM

Samples

Sample ID Description Type Environment
1 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
7 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
8 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
9 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
10 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
11 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
12 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
13 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
14 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
15 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
16 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
17 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
18 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
19 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
20 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
21 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
22 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
23 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
24 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
25 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
26 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
27 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
28 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
29 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
30 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
31 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
32 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
33 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
34 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
35 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
36 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
37 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
38 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
39 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
40 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
41 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
42 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
43 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
44 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
45 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
46 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
47 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
48 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
49 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
50 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
51 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
52 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
53 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
54 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
55 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
56 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
57 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
58 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
59 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
60 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
61 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
62 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
63 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
64 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
65 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
66 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
67 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
68 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
69 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
70 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
71 2524614857 Deinococcus ficus DSM 19119 Isolate Rhizosphere
72 2739367875 Deinococcus ficus CC-FR2-10 Isolate Unclassified
73 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
74 2857479173 Micrococcus sp. R-74225 Isolate Unclassified
75 2857632687 Micrococcus sp. R-73081 Isolate Unclassified
76 2870801768 Micrococcus endophyticus DSM 17945 Isolate Unclassified
77 2870804320 Micrococcus yunnanensis DSM 21948 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 94.89
Metatranscriptomes 0
Isolates 5.11

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.73
Nodule 0
Rhizoplane 0
Rhizosphere 93.43
Stem 0
Stem Tuber 0
Unclassified 0.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0373935_0036863 3300035692 Bacteria 3059
2 rootH2_10002771 3300003320 Bacteria 19707
3 Ga0070683_100009590 3300005329 Bacteria 8288
4 Ga0070683_100019981 3300005329 Bacteria 5954
5 Ga0068869_100000099 3300005334 Bacteria 40528
6 Ga0070713_100054379 3300005436 Bacteria 3321
7 Ga0070699_100011522 3300005518 Bacteria 7632
8 Ga0070684_100168140 3300005535 Bacteria 1991
9 Ga0070686_100002481 3300005544 Bacteria 10157
10 Ga0068857_100015112 3300005577 Bacteria 6738
11 Ga0068856_100001741 3300005614 Bacteria 22740
12 Ga0070717_10000016 3300006028 Bacteria 205932
13 Ga0068871_100001461 3300006358 Bacteria 15833
14 Ga0075434_100021774 3300006871 Bacteria 6234
15 Ga0068865_100000446 3300006881 Bacteria 22976
16 Ga0163163_10065490 3300014325 Bacteria 3607
17 Ga0207704_10001736 3300025938 Bacteria 9762
18 Ga0207689_10000564 3300025942 Bacteria 35434
19 Ga0207661_10028943 3300025944 Bacteria 4249
20 Ga0207702_10000137 3300026078 Bacteria 88042
21 Ga0207674_10028488 3300026116 Bacteria 5895
22 Ga0265337_1006209 3300028556 Bacteria 4641
23 Ga0265337_1008816 3300028556 Bacteria 3634
24 Ga0265319_1000046 3300028563 Bacteria 101716
25 Ga0265319_1001086 3300028563 Bacteria 16899
26 Ga0265319_1002068 3300028563 Bacteria 11273
27 Ga0265319_1002827 3300028563 Bacteria 9274
28 Ga0265319_1003290 3300028563 Bacteria 8497
29 Ga0265319_1009604 3300028563 Bacteria 4105
30 Ga0265319_1009614 3300028563 Bacteria 4103
31 Ga0265319_1026044 3300028563 Bacteria 2087
32 Ga0265334_10000350 3300028573 Bacteria 24684
33 Ga0265334_10007285 3300028573 Bacteria 4746
34 Ga0265318_10000079 3300028577 Bacteria 86861
35 Ga0265318_10000654 3300028577 Bacteria 23653
36 Ga0265318_10003326 3300028577 Bacteria 8139
37 Ga0265318_10004416 3300028577 Bacteria 6824
38 Ga0265318_10012797 3300028577 Bacteria 3559
39 Ga0265323_10000253 3300028653 Bacteria 31506
40 Ga0265323_10001374 3300028653 Bacteria 12052
41 Ga0265323_10007648 3300028653 Bacteria 4477
42 Ga0265322_10001137 3300028654 Bacteria 9128
43 Ga0265322_10007440 3300028654 Bacteria 3195
44 Ga0265336_10002680 3300028666 Bacteria 7215
45 Ga0265338_10003499 3300028800 Bacteria 22034
46 Ga0265338_10011721 3300028800 Bacteria 10090
47 Ga0265324_10000699 3300029957 Bacteria 22383
48 Ga0265324_10020295 3300029957 Bacteria 2389
49 Ga0265330_10040312 3300031235 Bacteria 2074
50 Ga0265320_10000543 3300031240 Bacteria 29128
51 Ga0265320_10000839 3300031240 Bacteria 23179
52 Ga0265320_10001241 3300031240 Bacteria 18734
53 Ga0265320_10002058 3300031240 Bacteria 14163
54 Ga0265320_10033483 3300031240 Bacteria 2623
55 Ga0265331_10007308 3300031250 Bacteria 6401
56 Ga0265327_10000088 3300031251 Bacteria 198019
57 Ga0265327_10001183 3300031251 Bacteria 35336
58 Ga0265327_10006300 3300031251 Bacteria 9547
59 Ga0265316_10010286 3300031344 Bacteria 8531
60 Ga0265316_10023324 3300031344 Bacteria 5200
61 Ga0265316_10073592 3300031344 Bacteria 2631
62 Ga0307408_100000062 3300031548 Bacteria 127855
63 Ga0265313_10000174 3300031595 Bacteria 68230
64 Ga0265313_10001546 3300031595 Bacteria 21379
65 Ga0265313_10003279 3300031595 Bacteria 13293
66 Ga0265313_10004935 3300031595 Bacteria 9989
67 Ga0265313_10005344 3300031595 Bacteria 9482
68 Ga0265313_10017863 3300031595 Bacteria 4007
69 Ga0265313_10020186 3300031595 Bacteria 3681
70 Ga0265313_10038363 3300031595 Bacteria 2386
71 Ga0307508_10000031 3300031616 Bacteria 163301
72 Ga0265314_10001315 3300031711 Bacteria 28137
73 Ga0265314_10002848 3300031711 Bacteria 17217
74 Ga0265314_10008695 3300031711 Bacteria 8685
75 Ga0265314_10095398 3300031711 Bacteria 1926
76 Ga0265342_10059057 3300031712 Bacteria 2266
77 Ga0307410_10000016 3300031852 Bacteria 72757
78 Ga0307412_10010623 3300031911 Bacteria 5306
79 Ga0307409_100000075 3300031995 Bacteria 35601
80 Ga0307416_100000012 3300032002 Bacteria 296814
81 Ga0307411_10102828 3300032005 Bacteria 2025
82 Ga0395905_0000018 3300037471 Bacteria 369321
83 Ga0395905_0016083 3300037471 Bacteria 7111
84 Ga0439442_000195 3300042002 Bacteria 15453
85 Ga0451577_0000150 3300042876 Bacteria 154181
86 Ga0451577_0000469 3300042876 Bacteria 69754
87 Ga0453683_0005059 3300044673 Bacteria 9254
88 Ga0453684_0000001 3300044712 Bacteria 2623166
89 Ga0453684_0005421 3300044712 Bacteria 25277
90 Ga0453684_0006122 3300044712 Bacteria 23172
91 Ga0453684_0025589 3300044712 Bacteria 8564
92 Ga0451576_0000071 3300045051 Bacteria 258795
93 Ga0451576_0000794 3300045051 Bacteria 61984
94 Ga0451576_0002181 3300045051 Bacteria 30265
95 Ga0451576_0019267 3300045051 Bacteria 7449
96 Ga0451576_0035119 3300045051 Bacteria 5321
97 Ga0501031_0004552 3300049568 Bacteria 8991
98 Ga0501032_0001948 3300049569 Bacteria 16244
99 Ga0501032_0002592 3300049569 Bacteria 14145
100 Ga0501032_0077180 3300049569 Bacteria 2218
101 Ga0501033_0014703 3300049570 Bacteria 5940
102 Ga0501034_0011930 3300049571 Bacteria 8984
103 Ga0501034_0178185 3300049571 Bacteria 2091
104 Ga0501036_0000906 3300049572 Bacteria 22209
105 Ga0501036_0229923 3300049572 Unclassified 1556
106 Ga0501037_0001471 3300049573 Bacteria 17274
107 Ga0501038_0007918 3300049574 Bacteria 9798
108 Ga0501039_0003685 3300049575 Bacteria 11485
109 Ga0501042_0017574 3300049578 Bacteria 4934
110 Ga0501043_0015656 3300049579 Bacteria 5944
111 Ga0501046_0010339 3300049580 Bacteria 8022
112 Ga0501046_0013061 3300049580 Bacteria 7048
113 Ga0501046_0015686 3300049580 Bacteria 6360
114 Ga0501046_0016798 3300049580 Bacteria 6119
115 Ga0501046_0017694 3300049580 Bacteria 5944
116 Ga0501047_0002871 3300049581 Bacteria 16358
117 Ga0501047_0007449 3300049581 Bacteria 10301
118 Ga0501048_0005551 3300049582 Bacteria 9592
119 Ga0501072_0075896 3300049588 Bacteria 2659
120 Ga0501083_0035062 3300049744 Bacteria 3429
121 Ga0501035_0000441 3300049822 Bacteria 46562
122 Ga0501035_0005072 3300049822 Bacteria 12482
123 Ga0501035_0180720 3300049822 Bacteria 1817
124 Ga0501044_0000204 3300049823 Bacteria 75175
125 Ga0501044_0007910 3300049823 Bacteria 11692
126 Ga0501044_0026413 3300049823 Bacteria 6145
127 Ga0501044_0045875 3300049823 Bacteria 4526
128 Ga0500622_0012557 3300053156 Bacteria 4585
129 Ga0501084_0069247 3300054114 Bacteria 2954
130 Ga0501082_0037762 3300060353 Bacteria 4166
131 2526062726 2524614857 Bacteria 4146328
132 2740062060 2739367875 Bacteria 4157290
133 2788434989 2786546940 Bacteria 6396474
134 2857479873 2857479173 Bacteria 2469263
135 2857634219 2857632687 Bacteria 2448521
136 2870803118 2870801768 Bacteria 2710986
137 2870805173 2870804320 Bacteria 2552467
138 Ga0373935_0036863
139 rootH2_10002771
140 Ga0070683_100009590
141 Ga0070683_100019981
142 Ga0068869_100000099
143 Ga0070713_100054379
144 Ga0070699_100011522
145 Ga0070684_100168140
146 Ga0070686_100002481
147 Ga0068857_100015112
148 Ga0068856_100001741
149 Ga0070717_10000016
150 Ga0068871_100001461
151 Ga0075434_100021774
152 Ga0068865_100000446
153 Ga0163163_10065490
154 Ga0207704_10001736
155 Ga0207689_10000564
156 Ga0207661_10028943
157 Ga0207702_10000137
158 Ga0207674_10028488
159 Ga0265337_1006209
160 Ga0265337_1008816
161 Ga0265319_1000046
162 Ga0265319_1001086
163 Ga0265319_1002068
164 Ga0265319_1002827
165 Ga0265319_1003290
166 Ga0265319_1009604
167 Ga0265319_1009614
168 Ga0265319_1026044
169 Ga0265334_10000350
170 Ga0265334_10007285
171 Ga0265318_10000079
172 Ga0265318_10000654
173 Ga0265318_10003326
174 Ga0265318_10004416
175 Ga0265318_10012797
176 Ga0265323_10000253
177 Ga0265323_10001374
178 Ga0265323_10007648
179 Ga0265322_10001137
180 Ga0265322_10007440
181 Ga0265336_10002680
182 Ga0265338_10003499
183 Ga0265338_10011721
184 Ga0265324_10000699
185 Ga0265324_10020295
186 Ga0265330_10040312
187 Ga0265320_10000543
188 Ga0265320_10000839
189 Ga0265320_10001241
190 Ga0265320_10002058
191 Ga0265320_10033483
192 Ga0265331_10007308
193 Ga0265327_10000088
194 Ga0265327_10001183
195 Ga0265327_10006300
196 Ga0265316_10010286
197 Ga0265316_10023324
198 Ga0265316_10073592
199 Ga0307408_100000062
200 Ga0265313_10000174
201 Ga0265313_10001546
202 Ga0265313_10003279
203 Ga0265313_10004935
204 Ga0265313_10005344
205 Ga0265313_10017863
206 Ga0265313_10020186
207 Ga0265313_10038363
208 Ga0307508_10000031
209 Ga0265314_10001315
210 Ga0265314_10002848
211 Ga0265314_10008695
212 Ga0265314_10095398
213 Ga0265342_10059057
214 Ga0307410_10000016
215 Ga0307412_10010623
216 Ga0307409_100000075
217 Ga0307416_100000012
218 Ga0307411_10102828
219 Ga0395905_0000018
220 Ga0395905_0016083
221 Ga0439442_000195
222 Ga0451577_0000150
223 Ga0451577_0000469
224 Ga0453683_0005059
225 Ga0453684_0000001
226 Ga0453684_0005421
227 Ga0453684_0006122
228 Ga0453684_0025589
229 Ga0451576_0000071
230 Ga0451576_0000794
231 Ga0451576_0002181
232 Ga0451576_0019267
233 Ga0451576_0035119
234 Ga0501031_0004552
235 Ga0501032_0001948
236 Ga0501032_0002592
237 Ga0501032_0077180
238 Ga0501033_0014703
239 Ga0501034_0011930
240 Ga0501034_0178185
241 Ga0501036_0000906
242 Ga0501036_0229923
243 Ga0501037_0001471
244 Ga0501038_0007918
245 Ga0501039_0003685
246 Ga0501042_0017574
247 Ga0501043_0015656
248 Ga0501046_0010339
249 Ga0501046_0013061
250 Ga0501046_0015686
251 Ga0501046_0016798
252 Ga0501046_0017694
253 Ga0501047_0002871
254 Ga0501047_0007449
255 Ga0501048_0005551
256 Ga0501072_0075896
257 Ga0501083_0035062
258 Ga0501035_0000441
259 Ga0501035_0005072
260 Ga0501035_0180720
261 Ga0501044_0000204
262 Ga0501044_0007910
263 Ga0501044_0026413
264 Ga0501044_0045875
265 Ga0500622_0012557
266 Ga0501084_0069247
267 Ga0501082_0037762
268 2526062726
269 2740062060
270 2788434989
271 2857479873
272 2857634219
273 2870803118
274 2870805173

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02637

GatB_Yqey

GatB domain

332

503

0.98

PF02934

GatB_N

GatB/GatE catalytic domain

5

293

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
4wj3-assembly2.cif.gz_H crystal structure of the asparagine transamidosome from pseudomonas aeruginosa 0.8693 4 406
2g5h-assembly1.cif.gz_B structure of trna-dependent amidotransferase gatcab 0.8348 4 400
3h0l-assembly2.cif.gz_E structure of trna-dependent amidotransferase gatcab from aquifex aeolicus 0.8324 1 416
3h0l-assembly2.cif.gz_E structure of trna-dependent amidotransferase gatcab from aquifex aeolicus 0.8306 1 416
3al0-assembly1.cif.gz_B crystal structure of the glutamine transamidosome from thermotoga maritima in the glutamylation state. 0.8257 1 482
ID Description Score Start End Superfamily
af_Q57624_410_472_1.10.10.410 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A; 0.9823 419 480 1.10.10.410
af_Q9VCD0_451_513_1.10.10.410 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A; 0.9812 423 479 1.10.10.410
af_Q5A9Z1_430_488_1.10.10.410 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A; 0.9668 423 479 1.10.10.410
af_Q7T010_492_552_1.10.10.410 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A; 0.9644 419 478 1.10.10.410
af_Q2FWZ0_412_475_1.10.10.410 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A; 0.958 419 482 1.10.10.410
ID Description Score Start End GO Terms
AF-A0A535DJD9-F1-model_v4 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B 0.9767 300 482 GO:0005524
GO:0006412
GO:0016740
GO:0050567
GO:0070681
AF-W0FDS0-F1-model_v4 Glutamyl-tRNA amidotransferase subnunit B 0.9614 160 287 GO:0005524
GO:0006412
GO:0016740
GO:0050567
GO:0070681
AF-A0A3D4CTH4-F1-model_v4 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB 0.9599 166 276 GO:0005524
GO:0006412
GO:0016740
GO:0050567
GO:0070681
AF-A0A871EMU2-F1-model_v4 Glutamyl-tRNA(Gln) amidotransferase subunit B 0.959 169 277 GO:0005524
GO:0006412
GO:0016740
GO:0050567
GO:0070681
AF-A0A829HA97-F1-model_v4 Aspartyl/glutamyl-tRNA amidotransferase subunit B (EC 6.3.5.-) 0.9585 309 482 GO:0005524
GO:0006412
GO:0016740
GO:0050567
GO:0070681

Map