F167668

General Info

Members Datasets Scaffolds Average Seq Length
136 95 136 228

Family's Representative Sequence

Representative Sequence 3300046557|Ga0495622_0011962|Ga0495622_0011962_805_1584
Length 259
Sequence VRERPNAKTCNHATTDEHRAGAARTLSRPFPSRSSSPAAFQRVNGKIRAREVRVIGGDGKQLGVLSLNDALAMARQHGVDLVEISALANPPVCRLIEIGKFRYELAKREKESKKHQHASTVKEIQLSPRIDPHDLRIKVTHAINFLCEDMKVKAALKFRGREMAHTEVGFEVVNKFLGEIAPFGTPDFKPKLIGKGINVMITPLPRNKRGKNPRAPETGHALEKNNHEPSPATPKDGAPASDKSKSNFANNPFAGIEIK

Samples

Sample ID Description Type Environment
1 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
2 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
15 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
16 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
17 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
18 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
19 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
20 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
21 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
22 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
23 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
24 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
34 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
35 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
36 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
37 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
38 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
39 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
40 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
41 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
42 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
43 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
44 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
45 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
46 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
47 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
48 3300034817 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1 Metagenome Rhizosphere
49 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
50 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
51 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
52 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
53 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
54 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
55 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
56 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
57 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
58 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
59 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
60 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
61 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
62 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
63 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
64 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
65 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
66 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
67 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
68 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
69 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
70 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
71 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
72 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
73 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
74 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
75 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
76 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
77 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
78 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
79 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
80 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
81 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
82 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
83 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
84 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
85 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
86 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
87 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
89 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
91 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
93 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
94 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.26
Metatranscriptomes 0.74
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 99.26
Stem 0
Stem Tuber 0
Unclassified 0.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH2_10036856 3300003320 Bacteria 20097
2 Ga0058862_12859491 3300004803 Unclassified 890
3 Ga0070683_100083668 3300005329 Bacteria 2989
4 Ga0070683_100452275 3300005329 Bacteria 1225
5 Ga0070690_100001043 3300005330 Bacteria 14184
6 Ga0070690_100056824 3300005330 Bacteria 2510
7 Ga0070666_10031402 3300005335 Unclassified 3506
8 Ga0070689_100029069 3300005340 Bacteria 4180
9 Ga0070688_100136180 3300005365 Bacteria 1663
10 Ga0070667_100440922 3300005367 Unclassified 1189
11 Ga0070714_100022759 3300005435 Bacteria 5142
12 Ga0070679_100479546 3300005530 Unclassified 1188
13 Ga0070684_100183030 3300005535 Unclassified 1905
14 Ga0068853_100194686 3300005539 Bacteria 1843
15 Ga0068855_100070197 3300005563 Bacteria 4076
16 Ga0068855_100255403 3300005563 Bacteria 1954
17 Ga0068855_100388841 3300005563 Bacteria 1530
18 Ga0068856_100000697 3300005614 Bacteria 36418
19 Ga0068856_100370770 3300005614 Unclassified 1450
20 Ga0068859_100034029 3300005617 Bacteria 5116
21 Ga0075434_100463592 3300006871 Bacteria 1288
22 Ga0097620_100034029 3300006931 Bacteria 5116
23 Ga0097620_100714914 3300006931 Bacteria 1092
24 Ga0105240_10015757 3300009093 Bacteria 10259
25 Ga0105238_10400461 3300009551 Unclassified 1366
26 Ga0105238_10912946 3300009551 Unclassified 897
27 Ga0105238_11104059 3300009551 Bacteria 816
28 Ga0163162_11194286 3300013306 Unclassified 863
29 Ga0157375_10000085 3300013308 Bacteria 93488
30 Ga0207680_10019764 3300025903 Unclassified 3610
31 Ga0207695_10023258 3300025913 Bacteria 7008
32 Ga0207652_10193944 3300025921 Bacteria 1827
33 Ga0207687_10217765 3300025927 Bacteria 1501
34 Ga0207664_10018299 3300025929 Bacteria 5155
35 Ga0207670_10011618 3300025936 Bacteria 5120
36 Ga0207667_10204415 3300025949 Bacteria 2026
37 Ga0207667_10370661 3300025949 Unclassified 1459
38 Ga0207639_10126133 3300026041 Bacteria 2111
39 Ga0207708_10302253 3300026075 Bacteria 1302
40 Ga0207702_10001709 3300026078 Bacteria 21630
41 Ga0207702_10203754 3300026078 Unclassified 1835
42 Ga0207641_10158761 3300026088 Bacteria 2054
43 Ga0265326_10007958 3300028558 Bacteria 3224
44 Ga0265326_10014909 3300028558 Bacteria 2260
45 Ga0265326_10063238 3300028558 Unclassified 1047
46 Ga0265319_1000003 3300028563 Bacteria 340561
47 Ga0265334_10013096 3300028573 Bacteria 3478
48 Ga0265334_10038079 3300028573 Archaea 1894
49 Ga0265318_10123448 3300028577 Bacteria 952
50 Ga0265323_10020514 3300028653 Bacteria 2544
51 Ga0265322_10007946 3300028654 Bacteria 3093
52 Ga0265336_10028865 3300028666 Bacteria 1732
53 Ga0265336_10062202 3300028666 Bacteria 1119
54 Ga0265338_10000184 3300028800 Bacteria 116834
55 Ga0265338_10000460 3300028800 Bacteria 72716
56 Ga0265338_10002335 3300028800 Bacteria 28668
57 Ga0265338_10002546 3300028800 Bacteria 27014
58 Ga0265338_10005828 3300028800 Bacteria 15899
59 Ga0265338_10038422 3300028800 Bacteria 4536
60 Ga0265338_10268934 3300028800 Bacteria 1250
61 Ga0265324_10000058 3300029957 Bacteria 93345
62 Ga0265324_10004614 3300029957 Bacteria 6153
63 Ga0265324_10019552 3300029957 Unclassified 2439
64 Ga0265324_10022582 3300029957 Bacteria 2248
65 Ga0265325_10231800 3300031241 Archaea 841
66 Ga0265339_10056736 3300031249 Bacteria 2120
67 Ga0265327_10004874 3300031251 Bacteria 11600
68 Ga0265316_10001121 3300031344 Bacteria 29042
69 Ga0265316_10069467 3300031344 Bacteria 2718
70 Ga0265316_10077362 3300031344 Bacteria 2555
71 Ga0265316_10093226 3300031344 Bacteria 2295
72 Ga0265313_10001677 3300031595 Bacteria 20480
73 Ga0373930_0011511 3300034816 Bacteria 1597
74 Ga0373948_0017363 3300034817 Bacteria 1340
75 Ga0373938_0062087 3300034957 Unclassified 876
76 Ga0373928_0000589 3300035084 Bacteria 7125
77 Ga0373929_0001936 3300035085 Unclassified 3871
78 Ga0373940_0056367 3300035088 Unclassified 1114
79 Ga0373944_0000124 3300035089 Bacteria 14575
80 Ga0373949_0000512 3300035090 Bacteria 12854
81 Ga0373951_0000276 3300035091 Bacteria 16383
82 Ga0373951_0015070 3300035091 Bacteria 1740
83 Ga0373932_0000004 3300035112 Bacteria 412176
84 Ga0373954_0003906 3300035118 Bacteria 6379
85 Ga0373956_0022186 3300035119 Bacteria 2714
86 Ga0373955_0012966 3300035172 Unclassified 4019
87 Ga0373942_0093776 3300035207 Unclassified 908
88 Ga0373962_0000050 3300035242 Bacteria 26920
89 Ga0373931_0000018 3300035691 Bacteria 190282
90 Ga0373935_0005880 3300035692 Bacteria 7265
91 Ga0373927_0010464 3300035695 Bacteria 6184
92 Ga0373927_0035988 3300035695 Unclassified 3220
93 Ga0373933_0021148 3300035724 Bacteria 3693
94 Ga0373947_0012254 3300035725 Bacteria 4912
95 Ga0373937_0002764 3300036401 Bacteria 14646
96 Ga0373925_0001603 3300037068 Bacteria 19104
97 Ga0373925_0172952 3300037068 Bacteria 1706
98 Ga0453684_0000707 3300044712 Bacteria 118400
99 Ga0453684_0149146 3300044712 Bacteria 2782
100 Ga0451576_0213110 3300045051 Bacteria 2017
101 Ga0451576_0848142 3300045051 Bacteria 959
102 Ga0495592_0012067 3300046454 Bacteria 6551
103 Ga0495629_0021783 3300046459 Unclassified 4573
104 Ga0495651_0177453 3300046462 Bacteria 1511
105 Ga0495628_0282993 3300046516 Bacteria 1231
106 Ga0495630_0023433 3300046517 Bacteria 4564
107 Ga0495640_0272565 3300046533 Bacteria 1055
108 Ga0495586_0000893 3300046535 Bacteria 17020
109 Ga0495586_0013267 3300046535 Bacteria 4368
110 Ga0495645_0088824 3300046543 Bacteria 2210
111 Ga0495622_0011962 3300046557 Bacteria 4014
112 Ga0495667_0032592 3300046559 Bacteria 3491
113 Ga0495667_0059552 3300046559 Unclassified 2506
114 Ga0495634_0003623 3300046642 Bacteria 12338
115 Ga0495634_0180206 3300046642 Unclassified 1323
116 Ga0495634_0223200 3300046642 Bacteria 1162
117 Ga0495657_0304279 3300046675 Unclassified 950
118 Ga0495647_0034103 3300046681 Unclassified 1905
119 Ga0495658_0339768 3300046683 Unclassified 954
120 Ga0495613_0036050 3300046689 Bacteria 3667
121 Ga0495675_0132612 3300047444 Unclassified 1548
122 Ga0501031_0000055 3300049568 Bacteria 61594
123 Ga0501031_0157566 3300049568 Bacteria 1484
124 Ga0501032_0024515 3300049569 Bacteria 4165
125 Ga0501032_0057040 3300049569 Bacteria 2624
126 Ga0501033_0005433 3300049570 Bacteria 10098
127 Ga0501033_0041233 3300049570 Bacteria 3445
128 Ga0501033_0274787 3300049570 Unclassified 1190
129 Ga0501037_0081571 3300049573 Bacteria 2345
130 Ga0501043_0023486 3300049579 Bacteria 4836
131 Ga0501070_0533489 3300049586 Bacteria 941
132 Ga0501080_0138237 3300049742 Bacteria 2253
133 Ga0501035_0001482 3300049822 Bacteria 24029
134 Ga0501035_0029936 3300049822 Bacteria 4965
135 Ga0501044_0000032 3300049823 Bacteria 169439
136 Ga0501044_0010705 3300049823 Bacteria 9952

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044712 Ga0453684_0149146 Ga0453684_0149146_387_1061 201
2 3300046543 Ga0495645_0088824 Ga0495645_0088824_744_1508 202
3 3300028800 Ga0265338_10000184 Ga0265338_100001847 204
4 3300034817 Ga0373948_0017363 Ga0373948_0017363_569_1255 204
5 3300037068 Ga0373925_0172952 Ga0373925_0172952_834_1484 204
6 3300005340 Ga0070689_100029069 Ga0070689_1000290694 209
7 3300005365 Ga0070688_100136180 Ga0070688_1001361802 209
8 3300009093 Ga0105240_10015757 Ga0105240_100157574 209
9 3300025913 Ga0207695_10023258 Ga0207695_100232586 209
10 3300025936 Ga0207670_10011618 Ga0207670_100116184 209
11 3300029957 Ga0265324_10004614 Ga0265324_100046142 209
12 3300046462 Ga0495651_0177453 Ga0495651_0177453_737_1453 210
13 3300045051 Ga0451576_0213110 Ga0451576_0213110_277_1002 211
14 3300046454 Ga0495592_0012067 Ga0495592_0012067_234_998 211
15 3300046516 Ga0495628_0282993 Ga0495628_0282993_281_1045 211
16 3300046533 Ga0495640_0272565 Ga0495640_0272565_252_1016 211
17 3300046642 Ga0495634_0223200 Ga0495634_0223200_31_795 211
18 3300005329 Ga0070683_100452275 Ga0070683_1004522751 214
19 3300005435 Ga0070714_100022759 Ga0070714_1000227594 214
20 3300009551 Ga0105238_10400461 Ga0105238_104004611 214
21 3300025929 Ga0207664_10018299 Ga0207664_100182992 214
22 3300005617 Ga0068859_100034029 Ga0068859_1000340293 215
23 3300006931 Ga0097620_100034029 Ga0097620_1000340293 215
24 3300028666 Ga0265336_10062202 Ga0265336_100622022 215
25 3300028800 Ga0265338_10005828 Ga0265338_100058286 215
26 3300028800 Ga0265338_10268934 Ga0265338_102689342 215
27 3300029957 Ga0265324_10000058 Ga0265324_1000005880 215
28 3300031344 Ga0265316_10077362 Ga0265316_100773622 215
29 3300034816 Ga0373930_0011511 Ga0373930_0011511_131_802 215
30 3300034957 Ga0373938_0062087 Ga0373938_0062087_58_729 215
31 3300035084 Ga0373928_0000589 Ga0373928_0000589_3688_4359 215
32 3300035085 Ga0373929_0001936 Ga0373929_0001936_2364_3035 215
33 3300035088 Ga0373940_0056367 Ga0373940_0056367_337_1008 215
34 3300035089 Ga0373944_0000124 Ga0373944_0000124_5678_6349 215
35 3300035090 Ga0373949_0000512 Ga0373949_0000512_7036_7707 215
36 3300035091 Ga0373951_0000276 Ga0373951_0000276_14090_14761 215
37 3300035112 Ga0373932_0000004 Ga0373932_0000004_66217_66888 215
38 3300035207 Ga0373942_0093776 Ga0373942_0093776_215_886 215
39 3300035242 Ga0373962_0000050 Ga0373962_0000050_16173_16844 215
40 3300035691 Ga0373931_0000018 Ga0373931_0000018_123394_124065 215
41 3300035692 Ga0373935_0005880 Ga0373935_0005880_604_1275 215
42 3300035695 Ga0373927_0035988 Ga0373927_0035988_1119_1790 215
43 3300035725 Ga0373947_0012254 Ga0373947_0012254_3513_4184 215
44 3300037068 Ga0373925_0001603 Ga0373925_0001603_8498_9169 215
45 3300045051 Ga0451576_0848142 Ga0451576_0848142_105_767 215
46 3300028563 Ga0265319_1000003 Ga0265319_1000003301 216
47 3300031595 Ga0265313_10001677 Ga0265313_100016779 216
48 3300005330 Ga0070690_100056824 Ga0070690_1000568241 218
49 3300005335 Ga0070666_10031402 Ga0070666_100314022 218
50 3300006931 Ga0097620_100714914 Ga0097620_1007149141 218
51 3300013306 Ga0163162_11194286 Ga0163162_111942861 218
52 3300025903 Ga0207680_10019764 Ga0207680_100197643 218
53 3300049568 Ga0501031_0157566 Ga0501031_0157566_538_1254 218
54 3300049569 Ga0501032_0057040 Ga0501032_0057040_460_1176 218
55 3300049570 Ga0501033_0041233 Ga0501033_0041233_1228_1944 218
56 3300049573 Ga0501037_0081571 Ga0501037_0081571_1478_2194 218
57 3300049579 Ga0501043_0023486 Ga0501043_0023486_516_1232 218
58 3300049586 Ga0501070_0533489 Ga0501070_0533489_81_797 218
59 3300049823 Ga0501044_0010705 Ga0501044_0010705_1696_2412 218
60 3300026075 Ga0207708_10302253 Ga0207708_103022531 219
61 3300049742 Ga0501080_0138237 Ga0501080_0138237_1246_1977 219
62 3300005367 Ga0070667_100440922 Ga0070667_1004409222 220
63 3300013308 Ga0157375_10000085 Ga0157375_1000008533 220
64 3300028558 Ga0265326_10007958 Ga0265326_100079582 220
65 3300028666 Ga0265336_10028865 Ga0265336_100288652 220
66 3300046683 Ga0495658_0339768 Ga0495658_0339768_44_763 220
67 3300005539 Ga0068853_100194686 Ga0068853_1001946862 221
68 3300005563 Ga0068855_100388841 Ga0068855_1003888412 221
69 3300005614 Ga0068856_100370770 Ga0068856_1003707701 221
70 3300009551 Ga0105238_10912946 Ga0105238_109129461 221
71 3300026041 Ga0207639_10126133 Ga0207639_101261332 221
72 3300026078 Ga0207702_10203754 Ga0207702_102037542 221
73 3300047444 Ga0495675_0132612 Ga0495675_0132612_144_929 221
74 3300028800 Ga0265338_10000460 Ga0265338_1000046016 222
75 3300031249 Ga0265339_10056736 Ga0265339_100567362 222
76 3300046517 Ga0495630_0023433 Ga0495630_0023433_3226_4014 222
77 3300046535 Ga0495586_0013267 Ga0495586_0013267_3414_4202 222
78 3300046559 Ga0495667_0032592 Ga0495667_0032592_640_1437 222
79 3300046642 Ga0495634_0180206 Ga0495634_0180206_98_886 222
80 3300046675 Ga0495657_0304279 Ga0495657_0304279_81_878 222
81 3300005330 Ga0070690_100001043 Ga0070690_1000010438 223
82 3300006871 Ga0075434_100463592 Ga0075434_1004635921 223
83 3300004803 Ga0058862_12859491 Ga0058862_128594911 224
84 3300005329 Ga0070683_100083668 Ga0070683_1000836684 224
85 3300005535 Ga0070684_100183030 Ga0070684_1001830303 224
86 3300029957 Ga0265324_10022582 Ga0265324_100225823 224
87 3300005563 Ga0068855_100070197 Ga0068855_1000701972 225
88 3300005614 Ga0068856_100000697 Ga0068856_10000069720 225
89 3300025921 Ga0207652_10193944 Ga0207652_101939442 225
90 3300025949 Ga0207667_10370661 Ga0207667_103706612 225
91 3300026078 Ga0207702_10001709 Ga0207702_1000170916 225
92 3300028800 Ga0265338_10038422 Ga0265338_100384222 225
93 3300009551 Ga0105238_11104059 Ga0105238_111040591 226
94 3300028800 Ga0265338_10002546 Ga0265338_100025467 226
95 3300031344 Ga0265316_10001121 Ga0265316_1000112121 226
96 3300035695 Ga0373927_0010464 Ga0373927_0010464_396_1142 226
97 3300049570 Ga0501033_0274787 Ga0501033_0274787_56_811 226
98 3300028800 Ga0265338_10002335 Ga0265338_1000233510 227
99 3300029957 Ga0265324_10019552 Ga0265324_100195522 227
100 3300031241 Ga0265325_10231800 Ga0265325_102318001 227
101 3300035091 Ga0373951_0015070 Ga0373951_0015070_570_1292 227
102 3300035118 Ga0373954_0003906 Ga0373954_0003906_2739_3491 227
103 3300035119 Ga0373956_0022186 Ga0373956_0022186_1451_2203 227
104 3300035172 Ga0373955_0012966 Ga0373955_0012966_1203_1955 227
105 3300035724 Ga0373933_0021148 Ga0373933_0021148_2726_3478 227
106 3300036401 Ga0373937_0002764 Ga0373937_0002764_12816_13568 227
107 3300046459 Ga0495629_0021783 Ga0495629_0021783_1460_2212 227
108 3300046535 Ga0495586_0000893 Ga0495586_0000893_6598_7350 227
109 3300046559 Ga0495667_0059552 Ga0495667_0059552_1123_1875 227
110 3300046642 Ga0495634_0003623 Ga0495634_0003623_1540_2292 227
111 3300046681 Ga0495647_0034103 Ga0495647_0034103_91_843 227
112 3300046689 Ga0495613_0036050 Ga0495613_0036050_396_1148 227
113 3300028558 Ga0265326_10063238 Ga0265326_100632382 228
114 3300028573 Ga0265334_10013096 Ga0265334_100130961 228
115 3300044712 Ga0453684_0000707 Ga0453684_0000707_79151_79888 228
116 3300031251 Ga0265327_10004874 Ga0265327_100048745 229
117 3300049568 Ga0501031_0000055 Ga0501031_0000055_55740_56465 229
118 3300049569 Ga0501032_0024515 Ga0501032_0024515_149_874 229
119 3300049570 Ga0501033_0005433 Ga0501033_0005433_5041_5766 229
120 3300049822 Ga0501035_0001482 Ga0501035_0001482_10896_11621 229
121 3300049823 Ga0501044_0000032 Ga0501044_0000032_89924_90649 229
122 3300005530 Ga0070679_100479546 Ga0070679_1004795461 230
123 3300005563 Ga0068855_100255403 Ga0068855_1002554032 230
124 3300025949 Ga0207667_10204415 Ga0207667_102044153 230
125 3300026088 Ga0207641_10158761 Ga0207641_101587612 230
126 3300028558 Ga0265326_10014909 Ga0265326_100149092 230
127 3300028573 Ga0265334_10038079 Ga0265334_100380792 230
128 3300028577 Ga0265318_10123448 Ga0265318_101234481 230
129 3300028653 Ga0265323_10020514 Ga0265323_100205142 230
130 3300028654 Ga0265322_10007946 Ga0265322_100079462 230
131 3300031344 Ga0265316_10069467 Ga0265316_100694672 230
132 3300031344 Ga0265316_10093226 Ga0265316_100932262 230
133 3300046557 Ga0495622_0011962 Ga0495622_0011962_805_1584 230
134 3300049822 Ga0501035_0029936 Ga0501035_0029936_1916_2632 230
135 3300003320 rootH2_10036856 rootH2_1003685618 231
136 3300025927 Ga0207687_10217765 Ga0207687_102177652 231

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00707

IF3_C

Translation initiation factor IF-3, C-terminal domain

119

204

0.98

PF05198

IF3_N

Translation initiation factor IF-3, N-terminal domain

43

112

0.98

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pLDDT pTM Quality
75.5 0.49 Low
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Predicted Structure (AlphaFold2)

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