F167113

General Info

Members Datasets Scaffolds Average Seq Length
136 39 136 275

Family's Representative Sequence

Representative Sequence 3300031548|Ga0307408_100059030|Ga0307408_1000590303
Length 286
Sequence MTTTITEPATTGGQQPGIYDGISNADYHADPALGSTSLKTLATRTPAHYQHDLTHPKFSDAFTLGTAAHSLILEGDTSGIVIVEADNWLTKDAKTAKAAALAEGKQPLLTKEIEQVWAMTHAVMAHPEAWKLFKGHKAEQSVFWEEDGLMLKCRPDAWQPGTLIDLKTARSADPNEFGKTAHEYGYHQSAAHYIDGVKAATGEELPFHFVLVEKTAPYLVSVVELDIEAINIGRQLNDRAKRIYRECVANNTWPGYPNTDLISLPMWAIYQTEDLLGITGDIEMEH

Samples

Sample ID Description Type Environment
1 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
5 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
6 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
7 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
8 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
9 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
10 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
11 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
12 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
13 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
14 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
15 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
16 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
17 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
18 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
19 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
20 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
21 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
22 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
23 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
24 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
25 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
26 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
27 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
28 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
29 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
30 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
31 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
32 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
33 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
34 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
35 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
36 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
37 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
38 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
39 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 100
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065714_10006642 3300005288 Bacteria 3497
2 Ga0065714_10011221 3300005288 Unclassified 2439
3 Ga0065714_10025424 3300005288 Bacteria 2005
4 Ga0065714_10028353 3300005288 Viruses 1245
5 Ga0065714_10067483 3300005288 Viruses 5457
6 Ga0065714_10076929 3300005288 Bacteria 2740
7 Ga0065714_10080291 3300005288 Bacteria 2450
8 Ga0065714_10080757 3300005288 Bacteria 2375
9 Ga0065714_10081020 3300005288 Bacteria 2377
10 Ga0065714_10089642 3300005288 Unclassified 1972
11 Ga0065714_10106279 3300005288 Bacteria 1548
12 Ga0065714_10106750 3300005288 Viruses 1544
13 Ga0065714_10140359 3300005288 Unclassified 1176
14 Ga0065714_10142707 3300005288 Unclassified 1151
15 Ga0065714_10163143 3300005288 Unclassified 1041
16 Ga0065712_10150543 3300005290 Bacteria 1373
17 Ga0065715_10105865 3300005293 Bacteria 2866
18 Ga0065715_10168422 3300005293 Bacteria 1567
19 Ga0065715_10376270 3300005293 Bacteria 914
20 Ga0065715_10377520 3300005293 Bacteria 912
21 Ga0070705_100020442 3300005440 Bacteria 3504
22 Ga0105244_10082187 3300009036 Viruses 1593
23 Ga0105243_10010779 3300009148 Bacteria 6919
24 Ga0105243_10308622 3300009148 Unclassified 1437
25 Ga0157373_10000289 3300013100 Bacteria 40419
26 Ga0157373_10029492 3300013100 Bacteria 3951
27 Ga0157373_10035412 3300013100 Bacteria 3584
28 Ga0157373_10134658 3300013100 Unclassified 1737
29 Ga0157373_10231226 3300013100 Unclassified 1306
30 Ga0157371_10002952 3300013102 Bacteria 15821
31 Ga0157371_10043520 3300013102 Bacteria 3198
32 Ga0157371_10060544 3300013102 Bacteria 2684
33 Ga0157371_10226275 3300013102 Bacteria 1344
34 Ga0157371_10245645 3300013102 Viruses 1288
35 Ga0157371_10438724 3300013102 Unclassified 959
36 Ga0157370_10004948 3300013104 Bacteria 15083
37 Ga0157370_10269785 3300013104 Bacteria 1572
38 Ga0157369_10002591 3300013105 Bacteria 21620
39 Ga0157369_10004185 3300013105 Bacteria 17095
40 Ga0157369_10023739 3300013105 Bacteria 6828
41 Ga0157369_10041701 3300013105 Bacteria 5009
42 Ga0157369_10091560 3300013105 Viruses 3246
43 Ga0157369_10113864 3300013105 Viruses 2873
44 Ga0157369_10182650 3300013105 Unclassified 2206
45 Ga0157369_10211634 3300013105 Bacteria 2032
46 Ga0157369_10416927 3300013105 Bacteria 1392
47 Ga0157369_10527723 3300013105 Bacteria 1221
48 Ga0157369_10745112 3300013105 Bacteria 1008
49 Ga0163162_10038259 3300013306 Bacteria 4788
50 Ga0163162_10054504 3300013306 Bacteria 4022
51 Ga0163162_10128245 3300013306 Bacteria 2644
52 Ga0163162_10151817 3300013306 Bacteria 2435
53 Ga0163162_10228545 3300013306 Bacteria 1991
54 Ga0163162_10407998 3300013306 Bacteria 1491
55 Ga0163162_10529512 3300013306 Bacteria 1307
56 Ga0163162_10662548 3300013306 Unclassified 1167
57 Ga0163162_10754501 3300013306 Bacteria 1092
58 Ga0163162_10960814 3300013306 Viruses 965
59 Ga0157375_10011038 3300013308 Bacteria 7964
60 Ga0157375_10015031 3300013308 Bacteria 6924
61 Ga0157375_10052215 3300013308 Viruses 4018
62 Ga0157375_10080450 3300013308 Bacteria 3296
63 Ga0157375_10151037 3300013308 Unclassified 2458
64 Ga0157375_10195324 3300013308 Bacteria 2179
65 Ga0157375_10229664 3300013308 Unclassified 2015
66 Ga0157375_10332589 3300013308 Viruses 1684
67 Ga0157375_10416964 3300013308 Unclassified 1509
68 Ga0157375_10448982 3300013308 Bacteria 1455
69 Ga0157375_10543592 3300013308 Bacteria 1324
70 Ga0157375_10648949 3300013308 Bacteria 1212
71 Ga0157375_10676031 3300013308 Viruses 1187
72 Ga0157375_10850623 3300013308 Bacteria 1059
73 Ga0163161_10023167 3300017792 Viruses 4378
74 Ga0163161_10056689 3300017792 Viruses 2846
75 Ga0163161_10130393 3300017792 Bacteria 1896
76 Ga0163161_10601125 3300017792 Unclassified 907
77 Ga0207655_1010162 3300025728 Bacteria 5745
78 Ga0207709_10006136 3300025935 Bacteria 6771
79 Ga0307408_100017969 3300031548 Viruses 4743
80 Ga0307408_100046330 3300031548 Viruses 3110
81 Ga0307408_100059030 3300031548 Bacteria 2791
82 Ga0307408_100115355 3300031548 Unclassified 2071
83 Ga0307408_100119412 3300031548 Bacteria 2040
84 Ga0307408_100193592 3300031548 Bacteria 1640
85 Ga0307408_100228876 3300031548 Bacteria 1521
86 Ga0307408_100260817 3300031548 Viruses 1434
87 Ga0307408_100544390 3300031548 Bacteria 1023
88 Ga0307405_10013987 3300031731 Bacteria 4300
89 Ga0307405_10014373 3300031731 Bacteria 4255
90 Ga0307405_10014392 3300031731 Bacteria 4253
91 Ga0307405_10097371 3300031731 Bacteria 1964
92 Ga0307405_10299973 3300031731 Bacteria 1218
93 Ga0307405_10560595 3300031731 Unclassified 926
94 Ga0307405_10582880 3300031731 Unclassified 910
95 Ga0307413_10008588 3300031824 Viruses 4835
96 Ga0307413_10482349 3300031824 Bacteria 991
97 Ga0307410_10029429 3300031852 Viruses 3497
98 Ga0307410_10083720 3300031852 Unclassified 2247
99 Ga0307410_10259173 3300031852 Bacteria 1355
100 Ga0307410_10441521 3300031852 Unclassified 1060
101 Ga0307410_10510381 3300031852 Unclassified 990
102 Ga0307407_10193763 3300031903 Viruses 1357
103 Ga0307412_10005350 3300031911 Bacteria 7203
104 Ga0307412_10005638 3300031911 Bacteria 7029
105 Ga0307412_10020832 3300031911 Viruses 3996
106 Ga0307412_10080745 3300031911 Unclassified 2247
107 Ga0307412_10116953 3300031911 Unclassified 1913
108 Ga0307412_10124810 3300031911 Bacteria 1860
109 Ga0307412_10158410 3300031911 Unclassified 1679
110 Ga0307412_10203871 3300031911 Bacteria 1504
111 Ga0307412_10284042 3300031911 Viruses 1300
112 Ga0307412_10445951 3300031911 Unclassified 1065
113 Ga0307412_10485703 3300031911 Bacteria 1025
114 Ga0307409_100005157 3300031995 Viruses 7467
115 Ga0307416_100000165 3300032002 Bacteria 37531
116 Ga0307416_100025005 3300032002 Bacteria 4370
117 Ga0307414_10007793 3300032004 Viruses 6039
118 Ga0307414_10010678 3300032004 Bacteria 5345
119 Ga0307415_100014481 3300032126 Bacteria 4638
120 Ga0395900_0001602 3300037418 Bacteria 26693
121 Ga0395898_0000948 3300037466 Bacteria 46182
122 Ga0395905_0000655 3300037471 Bacteria 46069
123 Ga0395901_0000453 3300038443 Bacteria 47707
124 Ga0439442_001871 3300042002 Bacteria 4125
125 Ga0495594_0000088 3300046499 Bacteria 42204
126 Ga0495642_0037580 3300046528 Viruses 1959
127 Ga0495668_0001084 3300046616 Bacteria 28382
128 Ga0495668_0001930 3300046616 Bacteria 18435
129 Ga0495668_0046558 3300046616 Viruses 2409
130 Ga0495660_0161323 3300046810 Viruses 1099
131 Ga0495581_0033224 3300047315 Bacteria 2987
132 Ga0495581_0036737 3300047315 Bacteria 2834
133 Ga0495636_0002766 3300047318 Bacteria 6765
134 Ga0495677_0009637 3300047445 Viruses 3562
135 Ga0495685_032382 3300047447 Viruses 1796
136 Ga0495681_0000265 3300047470 Bacteria 42302

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300013105 Ga0157369_10745112 Ga0157369_107451121 248
2 3300031731 Ga0307405_10013987 Ga0307405_100139874 258
3 3300031911 Ga0307412_10005350 Ga0307412_100053508 258
4 3300031548 Ga0307408_100544390 Ga0307408_1005443902 264
5 3300031731 Ga0307405_10097371 Ga0307405_100973712 264
6 3300031911 Ga0307412_10445951 Ga0307412_104459511 264
7 3300031911 Ga0307412_10116953 Ga0307412_101169531 265
8 3300031911 Ga0307412_10284042 Ga0307412_102840422 265
9 3300031548 Ga0307408_100260817 Ga0307408_1002608172 270
10 3300013104 Ga0157370_10004948 Ga0157370_1000494826 271
11 3300005288 Ga0065714_10081020 Ga0065714_100810204 272
12 3300005288 Ga0065714_10089642 Ga0065714_100896421 272
13 3300005288 Ga0065714_10106279 Ga0065714_101062792 272
14 3300005293 Ga0065715_10168422 Ga0065715_101684222 272
15 3300013102 Ga0157371_10002952 Ga0157371_1000295212 272
16 3300013102 Ga0157371_10043520 Ga0157371_100435202 272
17 3300013105 Ga0157369_10002591 Ga0157369_1000259129 272
18 3300013105 Ga0157369_10211634 Ga0157369_102116343 272
19 3300013306 Ga0163162_10228545 Ga0163162_102285453 272
20 3300013308 Ga0157375_10543592 Ga0157375_105435921 272
21 3300017792 Ga0163161_10023167 Ga0163161_100231674 272
22 3300017792 Ga0163161_10130393 Ga0163161_101303932 272
23 3300031731 Ga0307405_10014392 Ga0307405_1001439210 272
24 3300031731 Ga0307405_10582880 Ga0307405_105828801 272
25 3300031903 Ga0307407_10193763 Ga0307407_101937631 272
26 3300032004 Ga0307414_10010678 Ga0307414_100106783 272
27 3300037418 Ga0395900_0001602 Ga0395900_0001602_10671_11504 272
28 3300037466 Ga0395898_0000948 Ga0395898_0000948_30861_31694 272
29 3300037471 Ga0395905_0000655 Ga0395905_0000655_13244_14077 272
30 3300038443 Ga0395901_0000453 Ga0395901_0000453_6459_7292 272
31 3300047315 Ga0495581_0033224 Ga0495581_0033224_1130_1948 272
32 3300047315 Ga0495581_0036737 Ga0495581_0036737_1349_2167 272
33 3300047470 Ga0495681_0000265 Ga0495681_0000265_27317_28135 272
34 3300005288 Ga0065714_10006642 Ga0065714_100066427 273
35 3300005288 Ga0065714_10011221 Ga0065714_100112212 273
36 3300005288 Ga0065714_10025424 Ga0065714_100254242 273
37 3300005288 Ga0065714_10028353 Ga0065714_100283533 273
38 3300005288 Ga0065714_10067483 Ga0065714_100674831 273
39 3300005288 Ga0065714_10076929 Ga0065714_100769296 273
40 3300005288 Ga0065714_10080291 Ga0065714_100802911 273
41 3300005288 Ga0065714_10080757 Ga0065714_100807575 273
42 3300005288 Ga0065714_10106750 Ga0065714_101067502 273
43 3300005288 Ga0065714_10140359 Ga0065714_101403592 273
44 3300005288 Ga0065714_10142707 Ga0065714_101427071 273
45 3300005288 Ga0065714_10163143 Ga0065714_101631432 273
46 3300005290 Ga0065712_10150543 Ga0065712_101505433 273
47 3300005293 Ga0065715_10105865 Ga0065715_101058651 273
48 3300005293 Ga0065715_10376270 Ga0065715_103762701 273
49 3300005293 Ga0065715_10377520 Ga0065715_103775201 273
50 3300005440 Ga0070705_100020442 Ga0070705_1000204425 273
51 3300009036 Ga0105244_10082187 Ga0105244_100821872 273
52 3300009148 Ga0105243_10010779 Ga0105243_100107791 273
53 3300009148 Ga0105243_10308622 Ga0105243_103086223 273
54 3300013100 Ga0157373_10000289 Ga0157373_1000028919 273
55 3300013100 Ga0157373_10029492 Ga0157373_100294924 273
56 3300013100 Ga0157373_10035412 Ga0157373_1003541214 273
57 3300013100 Ga0157373_10134658 Ga0157373_101346582 273
58 3300013100 Ga0157373_10231226 Ga0157373_102312263 273
59 3300013102 Ga0157371_10060544 Ga0157371_100605444 273
60 3300013102 Ga0157371_10226275 Ga0157371_102262752 273
61 3300013102 Ga0157371_10245645 Ga0157371_102456452 273
62 3300013102 Ga0157371_10438724 Ga0157371_104387241 273
63 3300013104 Ga0157370_10269785 Ga0157370_102697851 273
64 3300013105 Ga0157369_10004185 Ga0157369_1000418534 273
65 3300013105 Ga0157369_10023739 Ga0157369_1002373914 273
66 3300013105 Ga0157369_10041701 Ga0157369_100417017 273
67 3300013105 Ga0157369_10091560 Ga0157369_100915603 273
68 3300013105 Ga0157369_10113864 Ga0157369_101138644 273
69 3300013105 Ga0157369_10182650 Ga0157369_101826508 273
70 3300013105 Ga0157369_10416927 Ga0157369_104169274 273
71 3300013105 Ga0157369_10527723 Ga0157369_105277233 273
72 3300013306 Ga0163162_10038259 Ga0163162_1003825910 273
73 3300013306 Ga0163162_10054504 Ga0163162_100545042 273
74 3300013306 Ga0163162_10128245 Ga0163162_101282454 273
75 3300013306 Ga0163162_10151817 Ga0163162_101518175 273
76 3300013306 Ga0163162_10407998 Ga0163162_104079982 273
77 3300013306 Ga0163162_10529512 Ga0163162_105295122 273
78 3300013306 Ga0163162_10662548 Ga0163162_106625481 273
79 3300013306 Ga0163162_10754501 Ga0163162_107545011 273
80 3300013306 Ga0163162_10960814 Ga0163162_109608141 273
81 3300013308 Ga0157375_10011038 Ga0157375_1001103816 273
82 3300013308 Ga0157375_10015031 Ga0157375_1001503111 273
83 3300013308 Ga0157375_10052215 Ga0157375_100522157 273
84 3300013308 Ga0157375_10080450 Ga0157375_100804502 273
85 3300013308 Ga0157375_10151037 Ga0157375_101510372 273
86 3300013308 Ga0157375_10195324 Ga0157375_101953245 273
87 3300013308 Ga0157375_10229664 Ga0157375_102296643 273
88 3300013308 Ga0157375_10332589 Ga0157375_103325893 273
89 3300013308 Ga0157375_10416964 Ga0157375_104169644 273
90 3300013308 Ga0157375_10448982 Ga0157375_104489821 273
91 3300013308 Ga0157375_10648949 Ga0157375_106489493 273
92 3300013308 Ga0157375_10676031 Ga0157375_106760313 273
93 3300013308 Ga0157375_10850623 Ga0157375_108506232 273
94 3300017792 Ga0163161_10056689 Ga0163161_1005668910 273
95 3300017792 Ga0163161_10601125 Ga0163161_106011251 273
96 3300025728 Ga0207655_1010162 Ga0207655_10101625 273
97 3300025935 Ga0207709_10006136 Ga0207709_100061361 273
98 3300031548 Ga0307408_100017969 Ga0307408_1000179692 273
99 3300031548 Ga0307408_100046330 Ga0307408_1000463305 273
100 3300031548 Ga0307408_100059030 Ga0307408_1000590303 273
101 3300031548 Ga0307408_100115355 Ga0307408_1001153556 273
102 3300031548 Ga0307408_100119412 Ga0307408_1001194122 273
103 3300031548 Ga0307408_100193592 Ga0307408_1001935923 273
104 3300031548 Ga0307408_100228876 Ga0307408_1002288761 273
105 3300031731 Ga0307405_10014373 Ga0307405_100143737 273
106 3300031731 Ga0307405_10299973 Ga0307405_102999732 273
107 3300031731 Ga0307405_10560595 Ga0307405_105605951 273
108 3300031824 Ga0307413_10008588 Ga0307413_100085888 273
109 3300031824 Ga0307413_10482349 Ga0307413_104823491 273
110 3300031852 Ga0307410_10029429 Ga0307410_100294296 273
111 3300031852 Ga0307410_10083720 Ga0307410_100837205 273
112 3300031852 Ga0307410_10259173 Ga0307410_102591731 273
113 3300031852 Ga0307410_10441521 Ga0307410_104415212 273
114 3300031852 Ga0307410_10510381 Ga0307410_105103811 273
115 3300031911 Ga0307412_10005638 Ga0307412_100056383 273
116 3300031911 Ga0307412_10020832 Ga0307412_100208322 273
117 3300031911 Ga0307412_10080745 Ga0307412_100807452 273
118 3300031911 Ga0307412_10124810 Ga0307412_101248104 273
119 3300031911 Ga0307412_10158410 Ga0307412_101584102 273
120 3300031911 Ga0307412_10203871 Ga0307412_102038712 273
121 3300031911 Ga0307412_10485703 Ga0307412_104857032 273
122 3300031995 Ga0307409_100005157 Ga0307409_1000051578 273
123 3300032002 Ga0307416_100000165 Ga0307416_10000016527 273
124 3300032002 Ga0307416_100025005 Ga0307416_10002500512 273
125 3300032004 Ga0307414_10007793 Ga0307414_1000779314 273
126 3300032126 Ga0307415_100014481 Ga0307415_1000144814 273
127 3300042002 Ga0439442_001871 Ga0439442_001871_963_1790 273
128 3300046499 Ga0495594_0000088 Ga0495594_0000088_28725_29552 273
129 3300046528 Ga0495642_0037580 Ga0495642_0037580_693_1514 273
130 3300046616 Ga0495668_0001084 Ga0495668_0001084_11330_12151 273
131 3300046616 Ga0495668_0001930 Ga0495668_0001930_4500_5321 273
132 3300046616 Ga0495668_0046558 Ga0495668_0046558_71_892 273
133 3300046810 Ga0495660_0161323 Ga0495660_0161323_46_867 273
134 3300047318 Ga0495636_0002766 Ga0495636_0002766_5359_6180 273
135 3300047445 Ga0495677_0009637 Ga0495677_0009637_718_1539 273
136 3300047447 Ga0495685_032382 Ga0495685_032382_101_922 273

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF12684

DUF3799

PDDEXK-like domain of unknown function (DUF3799)

34

262

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
3h4r-assembly1.cif.gz_A crystal structure of e. coli rece exonuclease 0.8203 18 255
3h4r-assembly1.cif.gz_A crystal structure of e. coli rece exonuclease 0.8031 18 255
3l0a-assembly1.cif.gz_A crystal structure of putative exonuclease (rer070207002219) from eubacterium rectale at 2.19 a resolution 0.6557 6 262
3l0a-assembly1.cif.gz_A crystal structure of putative exonuclease (rer070207002219) from eubacterium rectale at 2.19 a resolution 0.634 6 262
2l97-assembly1.cif.gz_A solution structure of htra pdz domain from streptococcus pneumoniae 0.6195 116 146
ID Description Score Start End Superfamily
3h4rA00 Alpha Beta;Alpha-Beta Complex;Lambda Exonuclease; Chain A; 0.8203 18 255 3.90.320.10
3h4rA00 Alpha Beta;Alpha-Beta Complex;Lambda Exonuclease; Chain A; 0.8031 18 255 3.90.320.10
af_Q0WMR0_299_441_2.100.10.30 Mainly Beta;Aligned Prism;Vitelline Membrane Outer Layer Protein I, subunit A;Jacalin-like lectin domain 0.6457 121 143 2.100.10.30
2l97A01 Mainly Beta;Roll;Pdz3 Domain;PDZ domain 0.6313 116 146 2.30.42.10
3l0aA00 Alpha Beta;Alpha-Beta Complex;Lambda Exonuclease; Chain A; 0.6143 7 255 3.90.320.10
ID Description Score Start End GO Terms
AF-A0A0K8Q145-F1-model_v4 Exodeoxyribonuclease 8 0.9491 1 146
AF-A0A2T3BX21-F1-model_v4 deleted 0.9447 1 258
AF-A0A2A7UDS5-F1-model_v4 Putative exodeoxyribonuclease 8 PDDEXK-like domain-containing protein 0.9224 2 252
AF-A0A6W0B996-F1-model_v4 Exonuclease VIII 0.922 95 222 GO:0004527
AF-A0A5X2TW21-F1-model_v4 Exonuclease VIII 0.922 122 226 GO:0004527

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pLDDT pTM Quality
89.04 0.83 High
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Predicted Structure (AlphaFold2)

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